Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007589

Physical Location & Seq

Genomic Coordinates Reverse (-)

396756 .. 399338

Gene Structure 2583 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G01890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1008 bp

ATGGATAGCTTGAGAGATGTTAAGCCTATCAAACTCATATTTTCTATTTTCTGTCTAGTTATTATACTATCCGCCTGTAATTCAACGGCAGAGCTACCGCGGTTCGTCCAACCACCAGAACCCGATGGTTCACTCAGTTTTCTCGTTGTCGGCGACTGGGGAAGAAGAGGTTCTTATAATCAGTCCCAAGTAGCTCTTCAGATGGGAAAAATAGGGAAGGACTTAAATATTGATTTCCTCATTTCGACTGGAGATAACTTTTATGATGATGGAATAATCAGTCCATATGATTCTCAATTTCAAGATTCGTTTACCAATATTTACACAGCAACTAGCTTACAAAAACCATGGTACAATGTATTAGGAAATCATGATTATAGAGGTAACGTCTATGCGCAACTCAGCCCCATACTCAGGGATTTGGACTGCCGTTGGATTTGTTTAAGATCTTATGTTGTTAACGCCGAGATTGTCGATATTTTCTTCGTGGATACAACACCGTTCGTAGATAGATATTTTGATGAACCAAAGGACCATGTATATGATTGGAGAGGCGTATTACCGAGAAATAAATACCTTAACAGTCTCTTAACGGATGTGGATGTGGCATTGCAAGAATCAATGGCTAAATGGAAAATAGTGGTAGGCCATCACACGATCAAAAGTGCAGGTCACCACGGAAATACCATAGAGCTTGAGAAACAACTTTTACCTATCCTCGAGGCTAATGAAGTGGATCTCTATATAAACGGGCATGATCATTGCTTGGAGCACATAAGCAGCATCAACAGTGGAATACAATTTATGACAAGTGGAGGTGGCTCCAAGGCGTGGAAAGGAGATGTGAATGATTGGAACCCACAAGAGATGAGGTTTTACTATGATGGACAAGGATTCATGTCGGTTTACACATCCGAAGCTGAACTACGCGTCGTTTTCTATGATGGTCTTGGTCACGTTTTGCATCGATGGAGCACTCTTAAGAATGGGGTTTATTCCGATATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko04142 ko04380 ko05323 map00740 map01100 map04142 map04380 map05323

Pfam Domains

Protein Families

Metallophos

Protein Analysis

335

Amino Acids

38.17

Weight (kDa)

5.14

Isoelectric Point (pI)

44.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Metallophos	PF00149	46 - 255	7.8e-20	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007589)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14700 AT1G14700 AT1G14700 AT1G14700 AT1G25230 AT1G25230 AT1G25230 AT2G01890 AT2G01890 AT2G01890
malus_domestica	MD06G1233400.v1.1
prunus_persica	Prupe.5G237800_v2.0.a1
pyrus_communis	pycom06g20800
rosa_chinensis	RchiOBHm_Chr7g0177851
rosa_laevigata	RLG00000005497
rosa_multiflora	Rmu_sc0006214.1_g000005
rosa_roxburghii	Rroxscaffold_3G00275500
rosa_rugosa	Rorug06G0410100 Rorug06G0410200
rosa_samantha	Rh7AG009600 Rh7BG009700 Rh7CG009800 Rh7DG009700
rosa_wichuraiana	Rw7G000800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	177
AbsI	CCTCGAGG	1 cut(s)	719
Acc16I	TGCGCA	1 cut(s)	396
Acc36I	ACCTGC	1 cut(s)	659
AccB7I	CCANNNNNTGG	1 cut(s)	831
AccII	CGCG	2 cut(s)	100, 930
AciI	CCGC	3 cut(s)	72, 98, 100
AclWI	GGATC	1 cut(s)	744
AcuI	CTGAAG	1 cut(s)	182
AfaI	GTAC	1 cut(s)	353
AfiI	CCNNNNNNNGG	2 cut(s)	414, 831
AflII	CTTAAG	1 cut(s)	980
AflIII	ACRYGT	1 cut(s)	928
AgsI	TTSAA	2 cut(s)	84, 302
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
AluBI	AGCT	6 cut(s)	9, 94, 194, 336, 694, 920
AluI	AGCT	6 cut(s)	9, 94, 194, 336, 694, 920
Alw21I	GWGCWC	2 cut(s)	774, 977
Alw26I	GTCTC	1 cut(s)	590
AlwI	GGATC	1 cut(s)	744
Ama87I	CYCGRG	1 cut(s)	719
AoxI	GGCC	1 cut(s)	646
ApeKI	GCWGC	1 cut(s)	780
Asp700I	GAANNNNTTC	1 cut(s)	169
AspLEI	GCGC	1 cut(s)	397
AspS9I	GGNCC	1 cut(s)	532
AsuHPI	GGTGA	1 cut(s)	665
AvaI	CYCGRG	1 cut(s)	719
AvaII	GGWCC	1 cut(s)	532
BarI	GAAGNNNNNNTAC	2 cut(s)	909, 941
Bbv12I	GWGCWC	2 cut(s)	774, 977
BbvI	GCAGC	1 cut(s)	792
BccI	CCATC	7 cut(s)	119, 196, 263, 657, 878, 938, 963
BceAI	ACGGC	2 cut(s)	102, 414
BciVI	GTATCC	1 cut(s)	484
BclI	TGATCA	1 cut(s)	757
BcoDI	GTCTC	1 cut(s)	590
BfaI	CTAG	2 cut(s)	56, 333
BfrI	CTTAAG	1 cut(s)	980
BfuAI	ACCTGC	1 cut(s)	659
BfuI	GTATCC	1 cut(s)	484
BglII	AGATCT	1 cut(s)	446
BisI	GCNGC	1 cut(s)	781
BlsI	GCNGC	1 cut(s)	782
Bme18I	GGWCC	1 cut(s)	532
BmeT110I	CYCGRG	1 cut(s)	719
BmgT120I	GGNCC	1 cut(s)	532
BmiI	GGNNCC	2 cut(s)	823, 857
BmrI	ACTGGG	1 cut(s)	166
BmsI	GCATC	2 cut(s)	792, 973
BmuI	ACTGGG	1 cut(s)	166
BpmI	CTGGAG	1 cut(s)	270
BpuEI	CTTGAG	2 cut(s)	31, 716
Bsa29I	ATCGAT	1 cut(s)	967
BsaJI	CCNNGG	4 cut(s)	98, 347, 676, 825
Bsc4I	CCNNNNNNNGG	2 cut(s)	414, 831
Bse1I	ACTGG	2 cut(s)	161, 253
Bse3DI	GCAATG	2 cut(s)	608, 760
BseCI	ATCGAT	1 cut(s)	967
BseDI	CCNNGG	4 cut(s)	98, 347, 676, 825
BseGI	GGATG	3 cut(s)	601, 607, 911
BseLI	CCNNNNNNNGG	2 cut(s)	414, 831
BseMI	GCAATG	2 cut(s)	608, 760
BseMII	CTCAG	3 cut(s)	148, 415, 427
BseNI	ACTGG	2 cut(s)	161, 253
BseXI	GCAGC	1 cut(s)	792
BsgI	GTGCAG	1 cut(s)	687
Bsh1236I	CGCG	2 cut(s)	100, 930
BshFI	GGCC	1 cut(s)	648
BshVI	ATCGAT	1 cut(s)	967
BsiHKAI	GWGCWC	2 cut(s)	774, 977
BsiHKCI	CYCGRG	1 cut(s)	719
BslFI	GGGAC	1 cut(s)	169
BslI	CCNNNNNNNGG	2 cut(s)	414, 831
BsmAI	GTCTC	1 cut(s)	590
BsmFI	GGGAC	1 cut(s)	169
BsnI	GGCC	1 cut(s)	648
BsoBI	CYCGRG	1 cut(s)	719
Bsp1286I	GDGCHC	2 cut(s)	774, 977
Bsp143I	GATC	4 cut(s)	446, 657, 736, 757
Bsp19I	CCATGG	1 cut(s)	347
BspACI	CCGC	3 cut(s)	72, 98, 100
BspANI	GGCC	1 cut(s)	648
BspCNI	CTCAG	3 cut(s)	147, 414, 426
BspDI	ATCGAT	1 cut(s)	967
BspFNI	CGCG	2 cut(s)	100, 930
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	2 cut(s)	823, 857
BspMI	ACCTGC	1 cut(s)	659
BspPI	GGATC	1 cut(s)	744
BspQI	GCTCTTC	1 cut(s)	201
BspTI	CTTAAG	1 cut(s)	980
BsrDI	GCAATG	2 cut(s)	608, 760
BsrI	ACTGG	2 cut(s)	161, 253
BssECI	CCNNGG	4 cut(s)	98, 347, 676, 825
BssMI	GATC	4 cut(s)	446, 657, 736, 757
BssT1I	CCWWGG	2 cut(s)	347, 825
Bst4CI	ACNGT	3 cut(s)	501, 584, 791
Bst6I	CTCTTC	2 cut(s)	160, 201
BstAFI	CTTAAG	1 cut(s)	980
BstDEI	CTNAG	3 cut(s)	134, 401, 413
BstDSI	CCRYGG	3 cut(s)	98, 347, 676
BstEII	GGTNACC	1 cut(s)	671
BstF5I	GGATG	3 cut(s)	601, 607, 911
BstFNI	CGCG	2 cut(s)	100, 930
BstHHI	GCGC	1 cut(s)	397
BstKTI	GATC	4 cut(s)	449, 660, 739, 760
BstMAI	GTCTC	1 cut(s)	590
BstMBI	GATC	4 cut(s)	446, 657, 736, 757
BstPI	GGTNACC	1 cut(s)	671
BstUI	CGCG	2 cut(s)	100, 930
BstV1I	GCAGC	1 cut(s)	792
BstX2I	RGATCY	2 cut(s)	446, 736
BstYI	RGATCY	2 cut(s)	446, 736
Bsu15I	ATCGAT	1 cut(s)	967
BsuI	GTATCC	1 cut(s)	484
BsuRI	GGCC	1 cut(s)	648
BsuTUI	ATCGAT	1 cut(s)	967
BtgI	CCRYGG	3 cut(s)	98, 347, 676
BtsCI	GGATG	3 cut(s)	601, 607, 911
BtsIMutI	CAGTG	1 cut(s)	796
BveI	ACCTGC	1 cut(s)	659
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	1 cut(s)	397
Cfr13I	GGNCC	1 cut(s)	532
Cfr42I	CCGCGG	1 cut(s)	101
ClaI	ATCGAT	1 cut(s)	967
CseI	GACGC	1 cut(s)	919
Csp6I	GTAC	1 cut(s)	352
CviAII	CATG	5 cut(s)	348, 371, 536, 755, 898
CviQI	GTAC	1 cut(s)	352
DdeI	CTNAG	3 cut(s)	134, 401, 413
DpnI	GATC	4 cut(s)	448, 659, 738, 759
DpnII	GATC	4 cut(s)	446, 657, 736, 757
Eam1104I	CTCTTC	2 cut(s)	160, 201
EarI	CTCTTC	2 cut(s)	160, 201
EciI	GGCGGA	1 cut(s)	61
Eco130I	CCWWGG	2 cut(s)	347, 825
Eco32I	GATATC	1 cut(s)	1003
Eco47I	GGWCC	1 cut(s)	532
Eco57I	CTGAAG	1 cut(s)	182
Eco88I	CYCGRG	1 cut(s)	719
Eco91I	GGTNACC	1 cut(s)	671
EcoO65I	GGTNACC	1 cut(s)	671
EcoRV	GATATC	1 cut(s)	1003
EcoT14I	CCWWGG	2 cut(s)	347, 825
ErhI	CCWWGG	2 cut(s)	347, 825
FaeI	CATG	5 cut(s)	351, 374, 539, 758, 901
FalI	AAGNNNNNCTT	4 cut(s)	157, 189, 180, 212
FaqI	GGGAC	1 cut(s)	169
FatI	CATG	5 cut(s)	347, 370, 535, 754, 897
FauNDI	CATATG	1 cut(s)	286
FbaI	TGATCA	1 cut(s)	757
Fnu4HI	GCNGC	1 cut(s)	781
FokI	GGATG	3 cut(s)	608, 614, 898
Fsp4HI	GCNGC	1 cut(s)	781
FspBI	CTAG	2 cut(s)	56, 333
FspI	TGCGCA	1 cut(s)	396
GlaI	GCGC	1 cut(s)	396
GluI	GCNGC	1 cut(s)	781
GsuI	CTGGAG	1 cut(s)	270
HaeIII	GGCC	1 cut(s)	648
HgaI	GACGC	1 cut(s)	919
HhaI	GCGC	1 cut(s)	397
Hin1II	CATG	5 cut(s)	351, 374, 539, 758, 901
Hin6I	GCGC	1 cut(s)	395
HinP1I	GCGC	1 cut(s)	395
HincII	GTYRAC	1 cut(s)	460
HindII	GTYRAC	1 cut(s)	460
HinfI	GANTC	4 cut(s)	290, 305, 617, 894
HpaI	GTTAAC	1 cut(s)	460
HphI	GGTGA	1 cut(s)	665
Hpy166II	GTNNAC	4 cut(s)	131, 312, 460, 907
Hpy188I	TCNGA	3 cut(s)	201, 916, 1000
Hpy188III	TCNNGA	2 cut(s)	302, 371
Hpy8I	GTNNAC	4 cut(s)	131, 312, 460, 907
Hpy99I	CGWCG	1 cut(s)	935
HpyAV	CCTTC	1 cut(s)	211
HpyCH4III	ACNGT	3 cut(s)	501, 584, 791
HpyCH4IV	ACGT	2 cut(s)	387, 957
HpyCH4V	TGCA	3 cut(s)	613, 668, 964
HpyF3I	CTNAG	3 cut(s)	134, 401, 413
HpySE526I	ACGT	2 cut(s)	387, 957
Hsp92II	CATG	5 cut(s)	351, 374, 539, 758, 901
HspAI	GCGC	1 cut(s)	395
Ksp22I	TGATCA	1 cut(s)	757
KspAI	GTTAAC	1 cut(s)	460
KspI	CCGCGG	1 cut(s)	101
Kzo9I	GATC	4 cut(s)	446, 657, 736, 757
LguI	GCTCTTC	1 cut(s)	201
LmnI	GCTCC	3 cut(s)	769, 827, 972
LpnPI	CCDG	6 cut(s)	88, 129, 142, 234, 400, 654
Lsp1109I	GCAGC	1 cut(s)	792
LweI	GCATC	2 cut(s)	792, 973
MaeI	CTAG	2 cut(s)	56, 333
MaeII	ACGT	2 cut(s)	387, 957
MaeIII	GTNAC	3 cut(s)	383, 671, 953
MalI	GATC	4 cut(s)	448, 659, 738, 759
MboI	GATC	4 cut(s)	446, 657, 736, 757
MboII	GAAGA	4 cut(s)	174, 177, 188, 475
MflI	RGATCY	2 cut(s)	446, 736
MhlI	GDGCHC	2 cut(s)	774, 977
MluCI	AATT	3 cut(s)	79, 296, 800
MluI	ACGCGT	1 cut(s)	928
MmeI	TCCRAC	2 cut(s)	133, 413
MnlI	CCTC	8 cut(s)	161, 248, 374, 545, 715, 728, 809, 864
MroXI	GAANNNNTTC	1 cut(s)	169
MseI	TTAA	7 cut(s)	21, 224, 443, 459, 579, 590, 981
MslI	CAYNNNNRTG	1 cut(s)	540
MspA1I	CMGCKG	1 cut(s)	100
MspCI	CTTAAG	1 cut(s)	980
MvnI	CGCG	2 cut(s)	100, 930
NcoI	CCATGG	1 cut(s)	347
NdeI	CATATG	1 cut(s)	286
NdeII	GATC	4 cut(s)	446, 657, 736, 757
NlaIII	CATG	5 cut(s)	351, 374, 539, 758, 901
NlaIV	GGNNCC	2 cut(s)	823, 857
NmeAIII	GCCGAG	1 cut(s)	490
NmuCI	GTSAC	2 cut(s)	671, 953
NsbI	TGCGCA	1 cut(s)	396
PaeR7I	CTCGAG	1 cut(s)	719
PagI	TCATGA	1 cut(s)	370
PciSI	GCTCTTC	1 cut(s)	201
PcsI	WCGNNNNNNNCGW	1 cut(s)	150
PdmI	GAANNNNTTC	1 cut(s)	169
PfeI	GAWTC	4 cut(s)	290, 305, 617, 894
PflMI	CCANNNNNTGG	1 cut(s)	831
PkrI	GCNGC	1 cut(s)	782
PsiI	TTATAA	1 cut(s)	177
PspEI	GGTNACC	1 cut(s)	671
PspN4I	GGNNCC	2 cut(s)	823, 857
PspPI	GGNCC	1 cut(s)	532
PspXI	VCTCGAGB	1 cut(s)	719
PsuI	RGATCY	2 cut(s)	446, 736
RsaI	GTAC	1 cut(s)	353
RsaNI	GTAC	1 cut(s)	352
RseI	CAYNNNNRTG	1 cut(s)	540
SacII	CCGCGG	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	201
SaqAI	TTAA	7 cut(s)	21, 224, 443, 459, 579, 590, 981
SatI	GCNGC	1 cut(s)	781
Sau3AI	GATC	4 cut(s)	446, 657, 736, 757
Sau96I	GGNCC	1 cut(s)	532
SduI	GDGCHC	2 cut(s)	774, 977
SfaNI	GCATC	2 cut(s)	792, 973
Sfr274I	CTCGAG	1 cut(s)	719
Sfr303I	CCGCGG	1 cut(s)	101
SgrBI	CCGCGG	1 cut(s)	101
SinI	GGWCC	1 cut(s)	532
SlaI	CTCGAG	1 cut(s)	719
SmiMI	CAYNNNNRTG	1 cut(s)	540
SmlI	CTYRAG	4 cut(s)	10, 695, 719, 980
SmoI	CTYRAG	4 cut(s)	10, 695, 719, 980
Sse9I	AATT	3 cut(s)	79, 296, 800
SsiI	CCGC	3 cut(s)	72, 98, 100
SspI	AATATT	2 cut(s)	229, 319
SspMI	CTAG	2 cut(s)	56, 333
StyI	CCWWGG	2 cut(s)	347, 825
TaaI	ACNGT	3 cut(s)	501, 584, 791
TaiI	ACGT	2 cut(s)	390, 960
TaqI	TCGA	4 cut(s)	245, 474, 720, 967
TasI	AATT	3 cut(s)	79, 296, 800
TfiI	GAWTC	4 cut(s)	290, 305, 617, 894
Tru1I	TTAA	7 cut(s)	21, 224, 443, 459, 579, 590, 981
Tru9I	TTAA	7 cut(s)	21, 224, 443, 459, 579, 590, 981
TscAI	CASTG	1 cut(s)	796
TseFI	GTSAC	2 cut(s)	671, 953
TseI	GCWGC	1 cut(s)	780
Tsp45I	GTSAC	2 cut(s)	671, 953
TspDTI	ATGAA	3 cut(s)	537, 744, 886
TspGWI	ACGGA	2 cut(s)	608, 693
TspRI	CASTG	1 cut(s)	796
Van91I	CCANNNNNTGG	1 cut(s)	831
Vha464I	CTTAAG	1 cut(s)	980
VpaK11BI	GGWCC	1 cut(s)	532
XhoI	CTCGAG	1 cut(s)	719
XmnI	GAANNNNTTC	1 cut(s)	169
XspI	CTAG	2 cut(s)	56, 333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.