Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013951

Physical Location & Seq

Genomic Coordinates Forward (+)

9071140 .. 9071861

Gene Structure 722 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G26220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 594 bp

ATGTTTCTCGGAGGCACAATCTCCACTCCTCCAGCTTCTCTCCGGTTAAGGTCCACATTAAACCCACAAAACGCAGTCACACAATCATCATCACAAGCGACGTTTCCAGCTGCAATGCAACGAAAGCCACCAAGTTACTCAATCAGCGACGAAGATCTCGAATCCAGAGGCTTTCTTCTCCGTCGAACAACAGAAGGACTTAACTTAGACCAGCTGAATTCAGTCTTTGCAGCCGTGGGATTCCCTCGTCGTGACACGGCGAAAATCGAGGTGGCGTTGCAGCACACAGACGCGTTGCTTTGGGTAGAGTACGAGAAAACGCGGAGGCCTGTAGCGTTTGCGAGAGCAACCGGTGACGGAGTTTTCAATGCGATCATATGGGATGTTGTGGTTGATCCATCGTTTCAAAGCTGTGGACTTGGGAAGGCGGTGATGGAGCGGTTGATTGAGGATTTACAGGTGAAAGGGATTTGTAACATTGCTCTGTATTCAGAGCCTCGAGTTCTCGGGTTTTATCGCCCGCTTGGGTTCGTCTCTGACCCGGATGGGATCAAAGGAATGGTTTTTATACGCAAACAGAGAAACAAGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004059 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0010817 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0018130 GO:0019438 GO:0030186 GO:0030187 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00380 map00380

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

197

Amino Acids

21.85

Weight (kDa)

9.39

Isoelectric Point (pI)

56.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	92 - 177	1.8e-11	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	99 - 178	3.3e-09	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26220
fragaria_vesca	FvH4_4g28730
malus_domestica	MD13G1053400.v1.1
prunus_persica	Prupe.1G184800_v2.0.a1 Prupe.1G298700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0049111 RchiOBHm_Chr6g0289251
rosa_laevigata	RLG00000006491 RLG00000029657
rosa_multiflora	Rmu_sc0001527.1_g000014 Rmu_ssc0000493.1_g000003
rosa_roxburghii	Rroxscaffold_5G00377920 Rroxscaffold_7G00179650
rosa_rugosa	Rorug04G0296900
rosa_samantha	Rh4DG354100 Rh6DG310300
rosa_wichuraiana	Rw4G030730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	439
AccII	CGCG	2 cut(s)	293, 322
AciI	CCGC	4 cut(s)	322, 428, 439, 521
AclWI	GGATC	2 cut(s)	389, 557
AcsI	RAATTY	1 cut(s)	217
AfaI	GTAC	1 cut(s)	311
AflIII	ACRYGT	1 cut(s)	291
AgeI	ACCGGT	1 cut(s)	350
AgsI	TTSAA	2 cut(s)	367, 407
AluBI	AGCT	4 cut(s)	35, 110, 214, 411
AluI	AGCT	4 cut(s)	35, 110, 214, 411
Alw26I	GTCTC	1 cut(s)	538
AlwI	GGATC	2 cut(s)	389, 557
Ama87I	CYCGRG	2 cut(s)	498, 506
AoxI	GGCC	1 cut(s)	326
ApeKI	GCWGC	3 cut(s)	110, 230, 280
ApoI	RAATTY	1 cut(s)	217
AsiGI	ACCGGT	1 cut(s)	350
AspS9I	GGNCC	1 cut(s)	51
AsuC2I	CCSGG	1 cut(s)	542
AsuHPI	GGTGA	3 cut(s)	365, 442, 472
AvaI	CYCGRG	2 cut(s)	498, 506
AvaII	GGWCC	1 cut(s)	51
BbvI	GCAGC	3 cut(s)	97, 242, 292
BccI	CCATC	3 cut(s)	406, 427, 539
BceAI	ACGGC	2 cut(s)	218, 273
BcnI	CCSGG	1 cut(s)	542
BcoDI	GTCTC	1 cut(s)	538
BfmI	CTRYAG	1 cut(s)	330
BglII	AGATCT	1 cut(s)	154
BisI	GCNGC	3 cut(s)	111, 231, 281
BlsI	GCNGC	3 cut(s)	112, 232, 282
Bme1390I	CCNGG	1 cut(s)	542
Bme18I	GGWCC	1 cut(s)	51
BmeT110I	CYCGRG	2 cut(s)	498, 506
BmgT120I	GGNCC	1 cut(s)	51
BmrFI	CCNGG	1 cut(s)	542
BpmI	CTGGAG	1 cut(s)	15
BpuMI	CCSGG	1 cut(s)	542
BsaJI	CCNNGG	1 cut(s)	234
BsaWI	WCCGGW	2 cut(s)	42, 350
Bse118I	RCCGGY	1 cut(s)	350
Bse3DI	GCAATG	2 cut(s)	120, 477
BseDI	CCNNGG	1 cut(s)	234
BseGI	GGATG	2 cut(s)	388, 550
BseMI	GCAATG	2 cut(s)	120, 477
BseRI	GAGGAG	1 cut(s)	18
BseXI	GCAGC	3 cut(s)	97, 242, 292
Bsh1236I	CGCG	2 cut(s)	293, 322
BshFI	GGCC	1 cut(s)	328
BshTI	ACCGGT	1 cut(s)	350
BsiHKCI	CYCGRG	2 cut(s)	498, 506
BsiSI	CCGG	3 cut(s)	43, 351, 542
BsmAI	GTCTC	1 cut(s)	538
BsmBI	CGTCTC	1 cut(s)	538
BsnI	GGCC	1 cut(s)	328
BsoBI	CYCGRG	2 cut(s)	498, 506
Bsp143I	GATC	4 cut(s)	154, 372, 394, 549
BspACI	CCGC	4 cut(s)	322, 428, 439, 521
BspANI	GGCC	1 cut(s)	328
BspFNI	CGCG	2 cut(s)	293, 322
BspPI	GGATC	2 cut(s)	389, 557
BsrBI	CCGCTC	1 cut(s)	439
BsrDI	GCAATG	2 cut(s)	120, 477
BsrFI	RCCGGY	1 cut(s)	350
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	1 cut(s)	234
BssMI	GATC	4 cut(s)	154, 372, 394, 549
BstC8I	GCNNGC	1 cut(s)	521
BstDEI	CTNAG	1 cut(s)	205
BstDSI	CCRYGG	1 cut(s)	234
BstF5I	GGATG	2 cut(s)	388, 550
BstFNI	CGCG	2 cut(s)	293, 322
BstKTI	GATC	4 cut(s)	157, 375, 397, 552
BstMAI	GTCTC	1 cut(s)	538
BstMBI	GATC	4 cut(s)	154, 372, 394, 549
BstMWI	GCNNNNNNNGC	1 cut(s)	124
BstSCI	CCNGG	1 cut(s)	540
BstSFI	CTRYAG	1 cut(s)	330
BstUI	CGCG	2 cut(s)	293, 322
BstV1I	GCAGC	3 cut(s)	97, 242, 292
BstX2I	RGATCY	1 cut(s)	154
BstYI	RGATCY	1 cut(s)	154
BsuRI	GGCC	1 cut(s)	328
BtgI	CCRYGG	1 cut(s)	234
BtsCI	GGATG	2 cut(s)	388, 550
Cac8I	GCNNGC	1 cut(s)	521
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	1 cut(s)	51
CseI	GACGC	1 cut(s)	299
Csp6I	GTAC	1 cut(s)	310
CspAI	ACCGGT	1 cut(s)	350
CviJI	RGCY	9 cut(s)	35, 110, 127, 171, 214, 233, 328, 411, 496
CviKI_1	RGCY	9 cut(s)	35, 110, 127, 171, 214, 233, 328, 411, 496
CviQI	GTAC	1 cut(s)	310
DdeI	CTNAG	1 cut(s)	205
DpnI	GATC	4 cut(s)	156, 374, 396, 551
DpnII	GATC	4 cut(s)	154, 372, 394, 549
Eco147I	AGGCCT	1 cut(s)	328
Eco47I	GGWCC	1 cut(s)	51
Eco88I	CYCGRG	2 cut(s)	498, 506
EcoRI	GAATTC	1 cut(s)	217
Esp3I	CGTCTC	1 cut(s)	538
FaiI	YATR	3 cut(s)	377, 379, 569
FauI	CCCGC	1 cut(s)	528
FauNDI	CATATG	1 cut(s)	377
Fnu4HI	GCNGC	3 cut(s)	111, 231, 281
FokI	GGATG	2 cut(s)	395, 557
Fsp4HI	GCNGC	3 cut(s)	111, 231, 281
GluI	GCNGC	3 cut(s)	111, 231, 281
GsuI	CTGGAG	1 cut(s)	15
HaeIII	GGCC	1 cut(s)	328
HapII	CCGG	3 cut(s)	43, 351, 542
HgaI	GACGC	1 cut(s)	299
HinfI	GANTC	2 cut(s)	161, 240
HpaII	CCGG	3 cut(s)	43, 351, 542
HphI	GGTGA	3 cut(s)	365, 442, 472
Hpy166II	GTNNAC	2 cut(s)	54, 416
Hpy188I	TCNGA	3 cut(s)	11, 493, 538
Hpy188III	TCNNGA	3 cut(s)	158, 165, 251
Hpy8I	GTNNAC	2 cut(s)	54, 416
Hpy99I	CGWCG	4 cut(s)	103, 152, 186, 252
HpyAV	CCTTC	2 cut(s)	188, 418
HpyCH4IV	ACGT	1 cut(s)	101
HpyCH4V	TGCA	4 cut(s)	113, 118, 230, 280
HpyF10VI	GCNNNNNNNGC	1 cut(s)	124
HpyF3I	CTNAG	1 cut(s)	205
HpySE526I	ACGT	1 cut(s)	101
Kzo9I	GATC	4 cut(s)	154, 372, 394, 549
LmnI	GCTCC	1 cut(s)	436
LpnPI	CCDG	9 cut(s)	45, 56, 120, 178, 224, 342, 364, 443, 555
Lsp1109I	GCAGC	3 cut(s)	97, 242, 292
MaeII	ACGT	1 cut(s)	101
MaeIII	GTNAC	5 cut(s)	76, 134, 251, 353, 473
MalI	GATC	4 cut(s)	156, 374, 396, 551
MbiI	CCGCTC	1 cut(s)	439
MboI	GATC	4 cut(s)	154, 372, 394, 549
MboII	GAAGA	2 cut(s)	164, 167
MflI	RGATCY	1 cut(s)	154
MluCI	AATT	1 cut(s)	217
MluI	ACGCGT	1 cut(s)	291
MnlI	CCTC	8 cut(s)	5, 39, 161, 255, 262, 318, 442, 507
MseI	TTAA	3 cut(s)	47, 59, 201
MspA1I	CMGCKG	2 cut(s)	110, 214
MspI	CCGG	3 cut(s)	43, 351, 542
MspR9I	CCNGG	1 cut(s)	542
MvnI	CGCG	2 cut(s)	293, 322
MwoI	GCNNNNNNNGC	1 cut(s)	124
NciI	CCSGG	1 cut(s)	542
NdeI	CATATG	1 cut(s)	377
NdeII	GATC	4 cut(s)	154, 372, 394, 549
NmuCI	GTSAC	3 cut(s)	76, 251, 353
PaeR7I	CTCGAG	1 cut(s)	498
PceI	AGGCCT	1 cut(s)	328
PcsI	WCGNNNNNNNCGW	1 cut(s)	156
PfeI	GAWTC	2 cut(s)	161, 240
PinAI	ACCGGT	1 cut(s)	350
PkrI	GCNGC	3 cut(s)	112, 232, 282
PspPI	GGNCC	1 cut(s)	51
PspXI	VCTCGAGB	1 cut(s)	498
PsuI	RGATCY	1 cut(s)	154
PvuII	CAGCTG	2 cut(s)	110, 214
RsaI	GTAC	1 cut(s)	311
RsaNI	GTAC	1 cut(s)	310
SaqAI	TTAA	3 cut(s)	47, 59, 201
SatI	GCNGC	3 cut(s)	111, 231, 281
Sau3AI	GATC	4 cut(s)	154, 372, 394, 549
Sau96I	GGNCC	1 cut(s)	51
ScrFI	CCNGG	1 cut(s)	542
SetI	ASST	8 cut(s)	37, 53, 104, 112, 216, 273, 413, 462
SfcI	CTRYAG	1 cut(s)	330
Sfr274I	CTCGAG	1 cut(s)	498
SinI	GGWCC	1 cut(s)	51
SlaI	CTCGAG	1 cut(s)	498
SmlI	CTYRAG	1 cut(s)	498
SmoI	CTYRAG	1 cut(s)	498
Sse9I	AATT	1 cut(s)	217
SseBI	AGGCCT	1 cut(s)	328
SsiI	CCGC	4 cut(s)	322, 428, 439, 521
StuI	AGGCCT	1 cut(s)	328
StyD4I	CCNGG	1 cut(s)	540
TaiI	ACGT	1 cut(s)	104
TaqI	TCGA	4 cut(s)	159, 184, 267, 499
TasI	AATT	1 cut(s)	217
TfiI	GAWTC	2 cut(s)	161, 240
Tru1I	TTAA	3 cut(s)	47, 59, 201
Tru9I	TTAA	3 cut(s)	47, 59, 201
TseFI	GTSAC	3 cut(s)	76, 251, 353
TseI	GCWGC	3 cut(s)	110, 230, 280
Tsp45I	GTSAC	3 cut(s)	76, 251, 353
TspGWI	ACGGA	2 cut(s)	170, 372
VpaK11BI	GGWCC	1 cut(s)	51
XapI	RAATTY	1 cut(s)	217
XhoI	CTCGAG	1 cut(s)	498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.