Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013951

Physical Location & Seq

Genomic Coordinates Reverse (-)

29424280 .. 29425084

Gene Structure 805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G298700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 579 bp

ATGCTCCTACGTGGCACAATCTCCGCTCCCCTCTCTTGTCTCCGCCTCAGAAGCACCACCACCTCCACTCCCCCTTTAAACGTCCCCGTTTCGCGGCGCACTTCAACAACCACCAACAACTACTCAATCTCCGACCAAGACCTGGACTCCCGAGGCTTCCTCCTCCACCGCACGATCGCGGAGCTCAACCTGGACCACCTCAACAAGGTCTTCGTAGCGGTCGGGTTTCCGAAGCGGGACCCGGATAAGATCCGAACGGCGCTGGAGCACACTGACGCGCTGCTGTGGATGGAGTACAGGAAAACGAAGAGGCCTGTGGCGTTCGCTAGGGCGACAGGGGACGGCGTCTTCAACGCGATCATATGGGACGTGGTGGTGGACCCCTCGTTTCAGGGGCTGGGGCTGGGGAAGGCGGTGATGGAGAGGTTGGTGGAGGAGCTGGTGGCGAAAGGGATTTGTAATATTGCTTTGTATTCGGAGCCCCGGGTTCTCGGGTTTTACAGGCCCTTGGGCTTTGTGGCGGATCCGGATGGGATCCGGGGCATGGTGTACTCCAGAAAACCCAAAAGGAAGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004059 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0010817 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0018130 GO:0019438 GO:0030186 GO:0030187 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00380 map00380

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

193

Amino Acids

21.45

Weight (kDa)

9.84

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013951)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26220
fragaria_vesca	FvH4_4g28730
malus_domestica	MD13G1053400.v1.1
prunus_persica	Prupe.1G184800_v2.0.a1 Prupe.1G298700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0049111 RchiOBHm_Chr6g0289251
rosa_laevigata	RLG00000006491 RLG00000029657
rosa_multiflora	Rmu_sc0001527.1_g000014 Rmu_ssc0000493.1_g000003
rosa_roxburghii	Rroxscaffold_5G00377920 Rroxscaffold_7G00179650
rosa_rugosa	Rorug04G0296900
rosa_samantha	Rh4DG354100 Rh6DG310300
rosa_wichuraiana	Rw4G030730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	142
AccBSI	CCGCTC	1 cut(s)	26
AccII	CGCG	4 cut(s)	94, 179, 278, 356
AccIII	TCCGGA	1 cut(s)	526
AciI	CCGC	9 cut(s)	24, 43, 94, 169, 179, 218, 235, 413, 521
AclWI	GGATC	5 cut(s)	244, 518, 529, 531, 542
AcyI	GRCGYC	1 cut(s)	345
AfaI	GTAC	2 cut(s)	296, 551
AfiI	CCNNNNNNNGG	4 cut(s)	93, 142, 205, 544
AgsI	TTSAA	2 cut(s)	105, 352
AjiI	CACGTC	1 cut(s)	370
AjnI	CCWGG	2 cut(s)	141, 189
AluBI	AGCT	2 cut(s)	184, 439
AluI	AGCT	2 cut(s)	184, 439
Alw21I	GWGCWC	2 cut(s)	186, 270
Alw26I	GTCTC	1 cut(s)	44
AlwI	GGATC	5 cut(s)	244, 518, 529, 531, 542
AlwNI	CAGNNNCTG	1 cut(s)	397
Ama87I	CYCGRG	3 cut(s)	150, 483, 491
Aor13HI	TCCGGA	1 cut(s)	526
AoxI	GGCC	2 cut(s)	311, 503
ApeKI	GCWGC	1 cut(s)	280
AspLEI	GCGC	3 cut(s)	99, 262, 280
AspS9I	GGNCC	4 cut(s)	193, 238, 379, 504
AsuC2I	CCSGG	4 cut(s)	242, 484, 485, 539
AsuHPI	GGTGA	1 cut(s)	427
AvaI	CYCGRG	3 cut(s)	150, 483, 491
AvaII	GGWCC	3 cut(s)	193, 238, 379
BamHI	GGATCC	2 cut(s)	523, 534
BanII	GRGCYC	2 cut(s)	186, 483
BbsI	GAAGAC	2 cut(s)	202, 340
Bbv12I	GWGCWC	2 cut(s)	186, 270
BbvI	GCAGC	1 cut(s)	267
BccI	CCATC	3 cut(s)	283, 412, 524
BceAI	ACGGC	2 cut(s)	273, 358
BciT130I	CCWGG	2 cut(s)	143, 191
BcnI	CCSGG	4 cut(s)	242, 484, 485, 539
BcoDI	GTCTC	1 cut(s)	44
BfaI	CTAG	1 cut(s)	327
BfoI	RGCGCY	1 cut(s)	263
BisI	GCNGC	2 cut(s)	95, 281
BlsI	GCNGC	2 cut(s)	96, 282
Bme1390I	CCNGG	6 cut(s)	143, 191, 242, 484, 485, 539
Bme18I	GGWCC	3 cut(s)	193, 238, 379
BmeT110I	CYCGRG	3 cut(s)	150, 483, 491
BmgBI	CACGTC	1 cut(s)	370
BmgT120I	GGNCC	4 cut(s)	193, 238, 379, 504
BmiI	GGNNCC	6 cut(s)	239, 240, 381, 480, 525, 536
BmrFI	CCNGG	6 cut(s)	143, 191, 242, 484, 485, 539
BpiI	GAAGAC	2 cut(s)	202, 340
BplI	GAGNNNNNCTC	2 cut(s)	144, 176
BpmI	CTGGAG	2 cut(s)	284, 538
BpuMI	CCSGG	4 cut(s)	242, 484, 485, 539
BsaAI	YACGTR	1 cut(s)	11
BsaHI	GRCGYC	1 cut(s)	345
BsaJI	CCNNGG	5 cut(s)	151, 482, 483, 507, 538
BsaWI	WCCGGW	1 cut(s)	526
BsaXI	ACNNNNNCTCC	6 cut(s)	52, 82, 113, 131, 143, 161
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 142, 205, 544
BseAI	TCCGGA	1 cut(s)	526
BseBI	CCWGG	2 cut(s)	143, 191
BseDI	CCNNGG	5 cut(s)	151, 482, 483, 507, 538
BseGI	GGATG	2 cut(s)	294, 535
BseLI	CCNNNNNNNGG	4 cut(s)	93, 142, 205, 544
BseMII	CTCAG	1 cut(s)	61
BseRI	GAGGAG	2 cut(s)	152, 449
BseXI	GCAGC	1 cut(s)	267
BseYI	CCCAGC	2 cut(s)	397, 403
Bsh1236I	CGCG	4 cut(s)	94, 179, 278, 356
Bsh1285I	CGRYCG	2 cut(s)	177, 222
BshFI	GGCC	2 cut(s)	313, 505
BsiEI	CGRYCG	2 cut(s)	177, 222
BsiHKAI	GWGCWC	2 cut(s)	186, 270
BsiHKCI	CYCGRG	3 cut(s)	150, 483, 491
BsiSI	CCGG	4 cut(s)	242, 484, 527, 538
BslFI	GGGAC	4 cut(s)	68, 251, 353, 380
BslI	CCNNNNNNNGG	4 cut(s)	93, 142, 205, 544
BsmAI	GTCTC	1 cut(s)	44
BsmFI	GGGAC	4 cut(s)	68, 251, 353, 380
BsnI	GGCC	2 cut(s)	313, 505
BsoBI	CYCGRG	3 cut(s)	150, 483, 491
Bsp1286I	GDGCHC	3 cut(s)	186, 270, 483
Bsp13I	TCCGGA	1 cut(s)	526
Bsp143I	GATC	5 cut(s)	174, 249, 357, 523, 534
BspACI	CCGC	9 cut(s)	24, 43, 94, 169, 179, 218, 235, 413, 521
BspANI	GGCC	2 cut(s)	313, 505
BspCNI	CTCAG	1 cut(s)	60
BspEI	TCCGGA	1 cut(s)	526
BspFNI	CGCG	4 cut(s)	94, 179, 278, 356
BspLI	GGNNCC	6 cut(s)	239, 240, 381, 480, 525, 536
BspPI	GGATC	5 cut(s)	244, 518, 529, 531, 542
BsrBI	CCGCTC	1 cut(s)	26
BssECI	CCNNGG	5 cut(s)	151, 482, 483, 507, 538
BssMI	GATC	5 cut(s)	174, 249, 357, 523, 534
BssNI	GRCGYC	1 cut(s)	345
BssT1I	CCWWGG	1 cut(s)	507
Bst2UI	CCWGG	2 cut(s)	143, 191
Bst6I	CTCTTC	1 cut(s)	302
BstACI	GRCGYC	1 cut(s)	345
BstBAI	YACGTR	1 cut(s)	11
BstDEI	CTNAG	1 cut(s)	47
BstENI	CCTNNNNNAGG	1 cut(s)	203
BstF5I	GGATG	2 cut(s)	294, 535
BstFNI	CGCG	4 cut(s)	94, 179, 278, 356
BstH2I	RGCGCY	1 cut(s)	263
BstHHI	GCGC	3 cut(s)	99, 262, 280
BstKTI	GATC	5 cut(s)	177, 252, 360, 526, 537
BstMAI	GTCTC	1 cut(s)	44
BstMBI	GATC	5 cut(s)	174, 249, 357, 523, 534
BstMCI	CGRYCG	2 cut(s)	177, 222
BstMWI	GCNNNNNNNGC	1 cut(s)	51
BstNI	CCWGG	2 cut(s)	143, 191
BstSCI	CCNGG	6 cut(s)	141, 189, 240, 482, 483, 537
BstUI	CGCG	4 cut(s)	94, 179, 278, 356
BstV1I	GCAGC	1 cut(s)	267
BstV2I	GAAGAC	2 cut(s)	202, 340
BstX2I	RGATCY	3 cut(s)	249, 523, 534
BstYI	RGATCY	3 cut(s)	249, 523, 534
BsuRI	GGCC	2 cut(s)	313, 505
BtrI	CACGTC	1 cut(s)	370
BtsCI	GGATG	2 cut(s)	294, 535
BtsIMutI	CAGTG	1 cut(s)	270
CaiI	CAGNNNCTG	1 cut(s)	397
CfoI	GCGC	3 cut(s)	99, 262, 280
Cfr13I	GGNCC	4 cut(s)	193, 238, 379, 504
Cfr9I	CCCGGG	1 cut(s)	483
CseI	GACGC	2 cut(s)	284, 334
Csp6I	GTAC	2 cut(s)	295, 550
CviAII	CATG	1 cut(s)	544
CviJI	RGCY	9 cut(s)	156, 184, 313, 397, 403, 439, 481, 505, 513
CviKI_1	RGCY	9 cut(s)	156, 184, 313, 397, 403, 439, 481, 505, 513
CviQI	GTAC	2 cut(s)	295, 550
DdeI	CTNAG	1 cut(s)	47
DpnI	GATC	5 cut(s)	176, 251, 359, 525, 536
DpnII	GATC	5 cut(s)	174, 249, 357, 523, 534
DraI	TTTAAA	1 cut(s)	78
Eam1104I	CTCTTC	1 cut(s)	302
EarI	CTCTTC	1 cut(s)	302
EciI	GGCGGA	2 cut(s)	32, 536
Ecl136II	GAGCTC	1 cut(s)	184
Eco130I	CCWWGG	1 cut(s)	507
Eco147I	AGGCCT	1 cut(s)	313
Eco24I	GRGCYC	2 cut(s)	186, 483
Eco47I	GGWCC	3 cut(s)	193, 238, 379
Eco53kI	GAGCTC	1 cut(s)	184
Eco88I	CYCGRG	3 cut(s)	150, 483, 491
EcoICRI	GAGCTC	1 cut(s)	184
EcoNI	CCTNNNNNAGG	1 cut(s)	203
EcoO109I	RGGNCCY	2 cut(s)	238, 504
EcoRII	CCWGG	2 cut(s)	141, 189
EcoT14I	CCWWGG	1 cut(s)	507
EcoT38I	GRGCYC	2 cut(s)	186, 483
ErhI	CCWWGG	1 cut(s)	507
FaeI	CATG	1 cut(s)	547
FaiI	YATR	4 cut(s)	362, 364, 545, 577
FaqI	GGGAC	4 cut(s)	68, 251, 353, 380
FatI	CATG	1 cut(s)	543
FauI	CCCGC	1 cut(s)	228
FauNDI	CATATG	1 cut(s)	362
Fnu4HI	GCNGC	2 cut(s)	95, 281
FokI	GGATG	2 cut(s)	301, 542
FriOI	GRGCYC	2 cut(s)	186, 483
Fsp4HI	GCNGC	2 cut(s)	95, 281
FspBI	CTAG	1 cut(s)	327
GlaI	GCGC	3 cut(s)	98, 261, 279
GluI	GCNGC	2 cut(s)	95, 281
GsaI	CCCAGC	2 cut(s)	401, 407
GsuI	CTGGAG	2 cut(s)	284, 538
HaeII	RGCGCY	1 cut(s)	263
HaeIII	GGCC	2 cut(s)	313, 505
HapII	CCGG	4 cut(s)	242, 484, 527, 538
HgaI	GACGC	2 cut(s)	284, 334
HhaI	GCGC	3 cut(s)	99, 262, 280
Hin1I	GRCGYC	1 cut(s)	345
Hin1II	CATG	1 cut(s)	547
Hin6I	GCGC	3 cut(s)	97, 260, 278
HinP1I	GCGC	3 cut(s)	97, 260, 278
HinfI	GANTC	1 cut(s)	146
HpaII	CCGG	4 cut(s)	242, 484, 527, 538
HphI	GGTGA	1 cut(s)	427
Hpy166II	GTNNAC	2 cut(s)	379, 550
Hpy188I	TCNGA	5 cut(s)	50, 133, 231, 254, 478
Hpy188III	TCNNGA	3 cut(s)	150, 527, 555
Hpy8I	GTNNAC	2 cut(s)	379, 550
HpyAV	CCTTC	1 cut(s)	403
HpyCH4IV	ACGT	3 cut(s)	10, 81, 369
HpyF10VI	GCNNNNNNNGC	1 cut(s)	51
HpyF3I	CTNAG	1 cut(s)	47
HpySE526I	ACGT	3 cut(s)	10, 81, 369
Hsp92I	GRCGYC	1 cut(s)	345
Hsp92II	CATG	1 cut(s)	547
HspAI	GCGC	3 cut(s)	97, 260, 278
KflI	GGGWCCC	1 cut(s)	238
Kpn2I	TCCGGA	1 cut(s)	526
Kzo9I	GATC	5 cut(s)	174, 249, 357, 523, 534
LmnI	GCTCC	6 cut(s)	9, 31, 181, 265, 436, 478
Lsp1109I	GCAGC	1 cut(s)	267
MaeI	CTAG	1 cut(s)	327
MaeII	ACGT	3 cut(s)	10, 81, 369
MalI	GATC	5 cut(s)	176, 251, 359, 525, 536
MbiI	CCGCTC	1 cut(s)	26
MboI	GATC	5 cut(s)	174, 249, 357, 523, 534
MboII	GAAGA	3 cut(s)	202, 319, 340
MflI	RGATCY	3 cut(s)	249, 523, 534
MhlI	GDGCHC	3 cut(s)	186, 270, 483
MlyI	GAGTC	1 cut(s)	140
MmeI	TCCRAC	1 cut(s)	156
MroI	TCCGGA	1 cut(s)	526
MseI	TTAA	1 cut(s)	77
MspI	CCGG	4 cut(s)	242, 484, 527, 538
MspR9I	CCNGG	6 cut(s)	143, 191, 242, 484, 485, 539
MvaI	CCWGG	2 cut(s)	143, 191
MvnI	CGCG	4 cut(s)	94, 179, 278, 356
MwoI	GCNNNNNNNGC	1 cut(s)	51
NciI	CCSGG	4 cut(s)	242, 484, 485, 539
NdeI	CATATG	1 cut(s)	362
NdeII	GATC	5 cut(s)	174, 249, 357, 523, 534
NlaIII	CATG	1 cut(s)	547
NlaIV	GGNNCC	6 cut(s)	239, 240, 381, 480, 525, 536
PceI	AGGCCT	1 cut(s)	313
PflFI	GACNNNGTC	1 cut(s)	344
PflMI	CCANNNNNTGG	1 cut(s)	142
PkrI	GCNGC	2 cut(s)	96, 282
Ple19I	CGATCG	1 cut(s)	177
PleI	GAGTC	1 cut(s)	140
PpsI	GAGTC	1 cut(s)	140
Ppu21I	YACGTR	1 cut(s)	11
PpuMI	RGGWCCY	1 cut(s)	238
Psp124BI	GAGCTC	1 cut(s)	186
Psp5II	RGGWCCY	1 cut(s)	238
Psp6I	CCWGG	2 cut(s)	141, 189
PspFI	CCCAGC	2 cut(s)	397, 403
PspGI	CCWGG	2 cut(s)	141, 189
PspN4I	GGNNCC	6 cut(s)	239, 240, 381, 480, 525, 536
PspPI	GGNCC	4 cut(s)	193, 238, 379, 504
PspPPI	RGGWCCY	1 cut(s)	238
PstNI	CAGNNNCTG	1 cut(s)	397
PsuI	RGATCY	3 cut(s)	249, 523, 534
PsyI	GACNNNGTC	1 cut(s)	344
PvuI	CGATCG	1 cut(s)	177
RsaI	GTAC	2 cut(s)	296, 551
RsaNI	GTAC	2 cut(s)	295, 550
SacI	GAGCTC	1 cut(s)	186
SaqAI	TTAA	1 cut(s)	77
SatI	GCNGC	2 cut(s)	95, 281
Sau3AI	GATC	5 cut(s)	174, 249, 357, 523, 534
Sau96I	GGNCC	4 cut(s)	193, 238, 379, 504
SchI	GAGTC	1 cut(s)	140
ScrFI	CCNGG	6 cut(s)	143, 191, 242, 484, 485, 539
SduI	GDGCHC	3 cut(s)	186, 270, 483
SinI	GGWCC	3 cut(s)	193, 238, 379
SmaI	CCCGGG	1 cut(s)	485
SseBI	AGGCCT	1 cut(s)	313
SsiI	CCGC	9 cut(s)	24, 43, 94, 169, 179, 218, 235, 413, 521
SspI	AATATT	1 cut(s)	463
SspMI	CTAG	1 cut(s)	327
SstI	GAGCTC	1 cut(s)	186
StuI	AGGCCT	1 cut(s)	313
StyD4I	CCNGG	6 cut(s)	141, 189, 240, 482, 483, 537
StyI	CCWWGG	1 cut(s)	507
TaiI	ACGT	3 cut(s)	13, 84, 372
TatI	WGTACW	2 cut(s)	294, 549
TauI	GCSGC	1 cut(s)	97
Tru1I	TTAA	1 cut(s)	77
Tru9I	TTAA	1 cut(s)	77
TscAI	CASTG	1 cut(s)	277
TseI	GCWGC	1 cut(s)	280
TspMI	CCCGGG	1 cut(s)	483
TspRI	CASTG	1 cut(s)	277
Tth111I	GACNNNGTC	1 cut(s)	344
Van91I	CCANNNNNTGG	1 cut(s)	142
VpaK11BI	GGWCC	3 cut(s)	193, 238, 379
XagI	CCTNNNNNAGG	1 cut(s)	203
XmaI	CCCGGG	1 cut(s)	483
XspI	CTAG	1 cut(s)	327

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.