AT1G26360

hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012513
Physical Location & Seq
Reverse (-)
9118822 .. 9121227
2406 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G26360.1

Sequence Viewer

Length: 1335 bp
ATGGGGAACTCGTTCACATGCATATCTCACGAGCAGGAACAACGTCCCAAGAAATCTTCCGGCGGAGGAGGAAATAACTCCGGGAAATACAAATACGTGCGTCGTCTGTCGCTGATGCCTTCATTTAGAAGGAGGACGCTACTTCCTTCGCTCTCCTGCTCTGGATCATCATCCACTTCGTCTTCCAAGAAAGGCGGGATCAAAGCAAAGACGAAGAAGATAAGAGAGAGACATCATCATCATCATCAAGACCACGAAAAAGACTCTCATATAATTCAAGAGCAGACACTAGCAGCCACTAATCTCCTCTTCAACCAAACCCCTCGTAACAGCAACTCTGTTGTTCCTCCTAGTTTCAGACGCTCCACCTCTGTTGTATATCCCTCTGCTCAGCCATCGGGTACCAGCTCAGGACCCGTTTCAGCCGTCCAGACTCCTAAGAAGTCAAGCGCGGGATTCGTAAGAAGCTCTAGCTCTAGGCAAAGGTCCAGTACCGATCCCATGATCAAGCCTAACCAGCTCGTTGACAAGGAGCTAAATAAGGTGGAAGGTTCGGAGACGAAGCGGTTTGTGCTGGTTCATGGTGGTGGGTTCGGAGCTTGGTGTTGGTACAAAACCATAACTCTTTTAGAGAAGCATGGTTTCCAAGTCGATGCTGTTGAGTTGACCGGTTCAGGTGTGAGCTCGATTGACACAAACAACATCACCAGCCTCGCTCACTACTCCAAGCCTCTCCTCCATTTCTTCGAATCCCTCAAACCCACCGAGAAGGTGATACTGGTGGGACATGATTTTGGAGGAGCTTGTATGTCCTATGCGATGGAGATGTTTCCTACAAAGATCGCCAAAGCTGTCTTTATCTCTGCTGCTATGTTGGCTAATGGCCAAAGCACTCTTGATCTCTTTAATCAACAGCTGGGGTCAAATGATCTGATGCAACAAGCACAGATATTTCTGTACGCCAACGGCAAAAAGAATCCTCCAACTGCCGTTGATTTTGACAGATCTTTGCTTAGAGACTTTCTCTTTAATCAAAGCCCTCCAAAGGACCTCGCATTGGCATCGGTATCCATTAGACCGATCCCATTCGCACCGGTCAGCGAAAAGGTTCACGTGTCGGAGAAAAACTACGGTTCTATCCGACGGTTCTACATCAAAACCATGGAAGATTACGCTGTACCGGTTCTTCTCCAGGAAGCAATGATCAAATTGAACCCACCGGAACAAGTTTTTCAGCTCAAAGGCTCCGATCACGCACCGTTCTTCTCTCGGCCTCAGTCCTTGAACAAAATCCTCGTCGAGATATCTCAAATACCGTTCAAGAAATCATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

444

Amino Acids

49.09

Weight (kDa)

9.8

Isoelectric Point (pI)

56.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 188 - 296 3e-09 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 189 - 424 3.6e-17 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 190 - 427 4.9e-18 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012513)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G26360 AT1G69240
fragaria_vesca FvH4_4g29850
malus_domestica MD13G1061500.v1.1
prunus_persica Prupe.1G288600_v2.0.a1
pyrus_communis pycom13g05410
rosa_chinensis RchiOBHm_Chr4g0438101
rosa_laevigata RLG00000001449 RLG00000006388
rosa_multiflora Rmu_sc0027297.1_g000003
rosa_roxburghii Rroxscaffold_5G00379240
rosa_rugosa Rorug04G0307000 Rorug04G0307100
rosa_samantha Rh4AG358500 Rh4BG369400 Rh4CG383500 Rh4DG364300
rosa_wichuraiana Rw0G006300 Rw0G016240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 401
AccB1I GGYRCC 1 cut(s) 401
AccII CGCG 1 cut(s) 452
AciI CCGC 4 cut(s) 63, 195, 452, 565
AclWI GGATC 4 cut(s) 172, 206, 491, 1075
AcoI YGGCCR 1 cut(s) 883
AcvI CACGTG 1 cut(s) 1114
AfaI GTAC 5 cut(s) 403, 493, 611, 959, 1179
AfiI CCNNNNNNNGG 2 cut(s) 1045, 1057
AflIII ACRYGT 1 cut(s) 1113
AgeI ACCGGT 3 cut(s) 668, 1093, 1180
AgsI TTSAA 5 cut(s) 278, 313, 1213, 1285, 1321
AjnI CCWGG 1 cut(s) 1191
Alw21I GWGCWC 1 cut(s) 686
Alw26I GTCTC 3 cut(s) 223, 551, 1011
AlwI GGATC 4 cut(s) 172, 206, 491, 1075
AoxI GGCC 2 cut(s) 883, 1271
ApeKI GCWGC 2 cut(s) 293, 866
ArsI GACNNNNNNTTYG 2 cut(s) 1281, 1313
AsiGI ACCGGT 3 cut(s) 668, 1093, 1180
Asp700I GAANNNNTTC 2 cut(s) 11, 1107
Asp718I GGTACC 1 cut(s) 401
AspLEI GCGC 1 cut(s) 452
AspS9I GGNCC 3 cut(s) 413, 486, 1048
AsuC2I CCSGG 1 cut(s) 82
AsuHPI GGTGA 2 cut(s) 697, 784
AsuII TTCGAA 1 cut(s) 747
AvaII GGWCC 3 cut(s) 413, 486, 1048
BalI TGGCCA 1 cut(s) 885
BanI GGYRCC 1 cut(s) 401
BanII GRGCYC 1 cut(s) 686
BarI GAAGNNNNNNTAC 2 cut(s) 1170, 1202
BauI CACGAG 1 cut(s) 29
BbrPI CACGTG 1 cut(s) 1114
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 686
BbvI GCAGC 2 cut(s) 305, 853
BccI CCATC 2 cut(s) 403, 814
BceAI ACGGC 3 cut(s) 410, 974, 982
BcgI CGANNNNNNTGC 2 cut(s) 1044, 1078
BciT130I CCWGG 1 cut(s) 1193
BciVI GTATCC 1 cut(s) 1078
BclI TGATCA 2 cut(s) 504, 1203
BcnI CCSGG 1 cut(s) 82
BcoDI GTCTC 3 cut(s) 223, 551, 1011
BfaI CTAG 4 cut(s) 290, 351, 471, 477
BfuI GTATCC 1 cut(s) 1078
BglII AGATCT 1 cut(s) 1004
BisI GCNGC 2 cut(s) 294, 867
BlpI GCTNAGC 1 cut(s) 390
BlsI GCNGC 2 cut(s) 295, 868
Bme1390I CCNGG 2 cut(s) 82, 1193
Bme18I GGWCC 3 cut(s) 413, 486, 1048
BmgT120I GGNCC 3 cut(s) 413, 486, 1048
BmiI GGNNCC 3 cut(s) 403, 415, 1246
BmrFI CCNGG 2 cut(s) 82, 1193
BmsI GCATC 4 cut(s) 105, 643, 924, 1070
BpiI GAAGAC 1 cut(s) 174
BplI GAGNNNNNCTC 2 cut(s) 1008, 1040
BpmI CTGGAG 1 cut(s) 1175
Bpu10I CCTNAGC 1 cut(s) 409
Bpu1102I GCTNAGC 1 cut(s) 390
Bpu14I TTCGAA 1 cut(s) 747
BpuMI CCSGG 1 cut(s) 82
BsaAI YACGTR 2 cut(s) 97, 1114
BsaBI GATNNNNATC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 1161
BsaWI WCCGGW 4 cut(s) 668, 1093, 1180, 1219
Bsc4I CCNNNNNNNGG 2 cut(s) 1045, 1057
Bse118I RCCGGY 3 cut(s) 668, 1093, 1180
Bse1I ACTGG 2 cut(s) 489, 783
Bse3DI GCAATG 1 cut(s) 1206
Bse8I GATNNNNATC 1 cut(s) 169
BseBI CCWGG 1 cut(s) 1193
BseDI CCNNGG 1 cut(s) 1161
BseGI GGATG 2 cut(s) 170, 1328
BseJI GATNNNNATC 1 cut(s) 169
BseLI CCNNNNNNNGG 2 cut(s) 1045, 1057
BseMI GCAATG 1 cut(s) 1206
BseMII CTCAG 3 cut(s) 404, 423, 1289
BseNI ACTGG 2 cut(s) 489, 783
BseRI GAGGAG 4 cut(s) 81, 296, 725, 813
BseXI GCAGC 2 cut(s) 305, 853
BseYI CCCAGC 1 cut(s) 916
Bsh1236I CGCG 1 cut(s) 452
BshFI GGCC 2 cut(s) 885, 1273
BshNI GGYRCC 1 cut(s) 401
BshTI ACCGGT 3 cut(s) 668, 1093, 1180
BsiHKAI GWGCWC 1 cut(s) 686
BsiSI CCGG 6 cut(s) 60, 81, 669, 1094, 1181, 1220
BslFI GGGAC 2 cut(s) 30, 798
BslI CCNNNNNNNGG 2 cut(s) 1045, 1057
BsmAI GTCTC 3 cut(s) 223, 551, 1011
BsmBI CGTCTC 1 cut(s) 551
BsmFI GGGAC 2 cut(s) 30, 798
BsnI GGCC 2 cut(s) 885, 1273
Bsp119I TTCGAA 1 cut(s) 747
Bsp1286I GDGCHC 1 cut(s) 686
Bsp1720I GCTNAGC 1 cut(s) 390
Bsp19I CCATGG 1 cut(s) 1161
BspACI CCGC 4 cut(s) 63, 195, 452, 565
BspANI GGCC 2 cut(s) 885, 1273
BspCNI CTCAG 3 cut(s) 403, 422, 1288
BspFNI CGCG 1 cut(s) 452
BspLI GGNNCC 3 cut(s) 403, 415, 1246
BspPI GGATC 4 cut(s) 172, 206, 491, 1075
BspT104I TTCGAA 1 cut(s) 747
BspT107I GGYRCC 1 cut(s) 401
BsrDI GCAATG 1 cut(s) 1206
BsrFI RCCGGY 3 cut(s) 668, 1093, 1180
BsrI ACTGG 2 cut(s) 489, 783
BssAI RCCGGY 3 cut(s) 668, 1093, 1180
BssECI CCNNGG 1 cut(s) 1161
BssSI CACGAG 1 cut(s) 29
BssT1I CCWWGG 1 cut(s) 1161
Bst2BI CACGAG 1 cut(s) 29
Bst2UI CCWGG 1 cut(s) 1193
Bst4CI ACNGT 4 cut(s) 1133, 1146, 1260, 1317
Bst6I CTCTTC 1 cut(s) 314
BstBAI YACGTR 2 cut(s) 97, 1114
BstBI TTCGAA 1 cut(s) 747
BstDEI CTNAG 5 cut(s) 390, 409, 438, 1013, 1275
BstDSI CCRYGG 1 cut(s) 1161
BstF5I GGATG 2 cut(s) 170, 1328
BstFNI CGCG 1 cut(s) 452
BstHHI GCGC 1 cut(s) 452
BstMAI GTCTC 3 cut(s) 223, 551, 1011
BstMWI GCNNNNNNNGC 3 cut(s) 517, 571, 875
BstNI CCWGG 1 cut(s) 1193
BstNSI RCATGY 1 cut(s) 21
BstSCI CCNGG 2 cut(s) 80, 1191
BstUI CGCG 1 cut(s) 452
BstV1I GCAGC 2 cut(s) 305, 853
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 1 cut(s) 1004
BstYI RGATCY 1 cut(s) 1004
BsuI GTATCC 1 cut(s) 1078
BsuRI GGCC 2 cut(s) 885, 1273
BtgI CCRYGG 1 cut(s) 1161
BtgZI GCGATG 1 cut(s) 833
BtsCI GGATG 2 cut(s) 170, 1328
CfoI GCGC 1 cut(s) 452
Cfr10I RCCGGY 3 cut(s) 668, 1093, 1180
Cfr13I GGNCC 3 cut(s) 413, 486, 1048
CseI GACGC 3 cut(s) 89, 145, 369
Csp6I GTAC 5 cut(s) 402, 492, 610, 958, 1178
CspAI ACCGGT 3 cut(s) 668, 1093, 1180
CspCI CAANNNNNGTGG 2 cut(s) 355, 390
CviAII CATG 6 cut(s) 18, 502, 581, 638, 788, 1162
CviQI GTAC 5 cut(s) 402, 492, 610, 958, 1178
DdeI CTNAG 5 cut(s) 390, 409, 438, 1013, 1275
EaeI YGGCCR 1 cut(s) 883
Eam1104I CTCTTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 314
EciI GGCGGA 1 cut(s) 78
Ecl136II GAGCTC 1 cut(s) 684
Eco130I CCWWGG 1 cut(s) 1161
Eco24I GRGCYC 1 cut(s) 686
Eco32I GATATC 1 cut(s) 1305
Eco47I GGWCC 3 cut(s) 413, 486, 1048
Eco53kI GAGCTC 1 cut(s) 684
Eco72I CACGTG 1 cut(s) 1114
EcoICRI GAGCTC 1 cut(s) 684
EcoO109I RGGNCCY 2 cut(s) 413, 1048
EcoRII CCWGG 1 cut(s) 1191
EcoRV GATATC 1 cut(s) 1305
EcoT14I CCWWGG 1 cut(s) 1161
EcoT22I ATGCAT 1 cut(s) 23
EcoT38I GRGCYC 1 cut(s) 686
ErhI CCWWGG 1 cut(s) 1161
Esp3I CGTCTC 1 cut(s) 551
FaeI CATG 6 cut(s) 21, 505, 584, 641, 791, 1165
FaqI GGGAC 2 cut(s) 30, 798
FatI CATG 6 cut(s) 17, 501, 580, 637, 787, 1161
FauI CCCGC 2 cut(s) 188, 445
FbaI TGATCA 2 cut(s) 504, 1203
Fnu4HI GCNGC 2 cut(s) 294, 867
FokI GGATG 2 cut(s) 157, 1315
FriOI GRGCYC 1 cut(s) 686
Fsp4HI GCNGC 2 cut(s) 294, 867
FspBI CTAG 4 cut(s) 290, 351, 471, 477
GlaI GCGC 1 cut(s) 451
GluI GCNGC 2 cut(s) 294, 867
GsaI CCCAGC 1 cut(s) 920
GsuI CTGGAG 1 cut(s) 1175
HaeIII GGCC 2 cut(s) 885, 1273
HapII CCGG 6 cut(s) 60, 81, 669, 1094, 1181, 1220
HgaI GACGC 3 cut(s) 89, 145, 369
HhaI GCGC 1 cut(s) 452
Hin1II CATG 6 cut(s) 21, 505, 584, 641, 791, 1165
Hin6I GCGC 1 cut(s) 450
HinP1I GCGC 1 cut(s) 450
HincII GTYRAC 2 cut(s) 526, 666
HindII GTYRAC 2 cut(s) 526, 666
HinfI GANTC 5 cut(s) 263, 433, 456, 749, 976
HpaII CCGG 6 cut(s) 60, 81, 669, 1094, 1181, 1220
HphI GGTGA 2 cut(s) 697, 784
Hpy166II GTNNAC 4 cut(s) 15, 526, 666, 1111
Hpy188I TCNGA 7 cut(s) 359, 556, 596, 933, 1120, 1142, 1249
Hpy8I GTNNAC 4 cut(s) 15, 526, 666, 1111
Hpy99I CGWCG 3 cut(s) 105, 1146, 1301
HpyAV CCTTC 5 cut(s) 123, 129, 156, 542, 763
HpyCH4III ACNGT 4 cut(s) 1133, 1146, 1260, 1317
HpyCH4IV ACGT 3 cut(s) 43, 96, 1113
HpyCH4V TGCA 2 cut(s) 21, 937
HpyF10VI GCNNNNNNNGC 3 cut(s) 517, 571, 875
HpyF3I CTNAG 5 cut(s) 390, 409, 438, 1013, 1275
HpySE526I ACGT 3 cut(s) 43, 96, 1113
Hsp92II CATG 6 cut(s) 21, 505, 584, 641, 791, 1165
HspAI GCGC 1 cut(s) 450
KpnI GGTACC 1 cut(s) 405
Ksp22I TGATCA 2 cut(s) 504, 1203
LmnI GCTCC 5 cut(s) 368, 532, 596, 800, 1250
Lsp1109I GCAGC 2 cut(s) 305, 853
LweI GCATC 4 cut(s) 105, 643, 924, 1070
MaeI CTAG 4 cut(s) 290, 351, 471, 477
MaeII ACGT 3 cut(s) 43, 96, 1113
MaeIII GTNAC 1 cut(s) 326
MboII GAAGA 9 cut(s) 48, 174, 226, 229, 301, 736, 1178, 1178, 1255
MflI RGATCY 1 cut(s) 1004
MhlI GDGCHC 1 cut(s) 686
MlsI TGGCCA 1 cut(s) 885
MluCI AATT 2 cut(s) 273, 1208
MluNI TGGCCA 1 cut(s) 885
MlyI GAGTC 2 cut(s) 257, 427
MmeI TCCRAC 3 cut(s) 1007, 1098, 1165
Mox20I TGGCCA 1 cut(s) 885
Mph1103I ATGCAT 1 cut(s) 23
MroXI GAANNNNTTC 2 cut(s) 11, 1107
MscI TGGCCA 1 cut(s) 885
MseI TTAA 2 cut(s) 906, 1029
MslI CAYNNNNRTG 1 cut(s) 585
Msp20I TGGCCA 1 cut(s) 885
MspA1I CMGCKG 1 cut(s) 916
MspI CCGG 6 cut(s) 60, 81, 669, 1094, 1181, 1220
MspR9I CCNGG 2 cut(s) 82, 1193
MvaI CCWGG 1 cut(s) 1193
MvnI CGCG 1 cut(s) 452
MwoI GCNNNNNNNGC 3 cut(s) 517, 571, 875
NciI CCSGG 1 cut(s) 82
NcoI CCATGG 1 cut(s) 1161
NlaIII CATG 6 cut(s) 21, 505, 584, 641, 791, 1165
NlaIV GGNNCC 3 cut(s) 403, 415, 1246
NmeAIII GCCGAG 1 cut(s) 1249
NsiI ATGCAT 1 cut(s) 23
NspI RCATGY 1 cut(s) 21
NspV TTCGAA 1 cut(s) 747
PdmI GAANNNNTTC 2 cut(s) 11, 1107
PfeI GAWTC 3 cut(s) 456, 749, 976
PfoI TCCNGGA 2 cut(s) 80, 1191
PinAI ACCGGT 3 cut(s) 668, 1093, 1180
PkrI GCNGC 2 cut(s) 295, 868
PleI GAGTC 2 cut(s) 257, 427
PmaCI CACGTG 1 cut(s) 1114
PmlI CACGTG 1 cut(s) 1114
PpsI GAGTC 2 cut(s) 257, 427
Ppu21I YACGTR 2 cut(s) 97, 1114
PpuMI RGGWCCY 2 cut(s) 413, 1048
Psp124BI GAGCTC 1 cut(s) 686
Psp5II RGGWCCY 2 cut(s) 413, 1048
Psp6I CCWGG 1 cut(s) 1191
PspCI CACGTG 1 cut(s) 1114
PspFI CCCAGC 1 cut(s) 916
PspGI CCWGG 1 cut(s) 1191
PspN4I GGNNCC 3 cut(s) 403, 415, 1246
PspPI GGNCC 3 cut(s) 413, 486, 1048
PspPPI RGGWCCY 2 cut(s) 413, 1048
PsuI RGATCY 1 cut(s) 1004
PvuII CAGCTG 1 cut(s) 916
RsaI GTAC 5 cut(s) 403, 493, 611, 959, 1179
RsaNI GTAC 5 cut(s) 402, 492, 610, 958, 1178
RseI CAYNNNNRTG 1 cut(s) 585
SacI GAGCTC 1 cut(s) 686
SaqAI TTAA 2 cut(s) 906, 1029
SatI GCNGC 2 cut(s) 294, 867
Sau96I GGNCC 3 cut(s) 413, 486, 1048
SchI GAGTC 2 cut(s) 257, 427
ScrFI CCNGG 2 cut(s) 82, 1193
SduI GDGCHC 1 cut(s) 686
SfaNI GCATC 4 cut(s) 105, 643, 924, 1070
SfuI TTCGAA 1 cut(s) 747
SinI GGWCC 3 cut(s) 413, 486, 1048
SmiMI CAYNNNNRTG 1 cut(s) 585
Sse9I AATT 2 cut(s) 273, 1208
SsiI CCGC 4 cut(s) 63, 195, 452, 565
SspMI CTAG 4 cut(s) 290, 351, 471, 477
SstI GAGCTC 1 cut(s) 686
StyD4I CCNGG 2 cut(s) 80, 1191
StyI CCWWGG 1 cut(s) 1161
TaaI ACNGT 4 cut(s) 1133, 1146, 1260, 1317
TaiI ACGT 3 cut(s) 46, 99, 1116
TaqI TCGA 4 cut(s) 651, 686, 747, 1299
TaqII GACCGA 1 cut(s) 1093
TasI AATT 2 cut(s) 273, 1208
TfiI GAWTC 3 cut(s) 456, 749, 976
Tru1I TTAA 2 cut(s) 906, 1029
Tru9I TTAA 2 cut(s) 906, 1029
TseI GCWGC 2 cut(s) 293, 866
TspDTI ATGAA 2 cut(s) 111, 569
VpaK11BI GGWCC 3 cut(s) 413, 486, 1048
XceI RCATGY 1 cut(s) 21
XmnI GAANNNNTTC 2 cut(s) 11, 1107
XspI CTAG 4 cut(s) 290, 351, 471, 477
Zsp2I ATGCAT 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.