Alpha/beta hydrolase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26360 AT1G69240 |
| fragaria_vesca | FvH4_4g29850 |
| malus_domestica | MD13G1061500.v1.1 |
| prunus_persica | Prupe.1G288600_v2.0.a1 |
| pyrus_communis | pycom13g05410 |
| rosa_chinensis | RchiOBHm_Chr4g0438101 |
| rosa_laevigata | RLG00000001449 RLG00000006388 |
| rosa_multiflora | Rmu_sc0027297.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00379240 |
| rosa_rugosa | Rorug04G0307000 Rorug04G0307100 |
| rosa_samantha | Rh4AG358500 Rh4BG369400 Rh4CG383500 Rh4DG364300 |
| rosa_wichuraiana | Rw0G006300 Rw0G016240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 33 |
| Acc36I | ACCTGC | 1 cut(s) | 1518 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1586 |
| AccIII | TCCGGA | 1 cut(s) | 524 |
| AciI | CCGC | 5 cut(s) | 203, 994, 1067, 1253, 1517 |
| AclWI | GGATC | 5 cut(s) | 247, 831, 991, 1557, 1597 |
| AcoI | YGGCCR | 1 cut(s) | 1522 |
| AcsI | RAATTY | 1 cut(s) | 857 |
| AfaI | GTAC | 3 cut(s) | 124, 652, 742 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 81, 107, 255, 327, 1352, 1516, 1586 |
| AflIII | ACRYGT | 1 cut(s) | 653 |
| AgeI | ACCGGT | 1 cut(s) | 255 |
| AgsI | TTSAA | 6 cut(s) | 185, 253, 496, 880, 1270, 1500 |
| AhlI | ACTAGT | 1 cut(s) | 728 |
| AjnI | CCWGG | 3 cut(s) | 1351, 1579, 1618 |
| AleI | CACNNNNGTG | 2 cut(s) | 266, 435 |
| Alw21I | GWGCWC | 1 cut(s) | 56 |
| Alw26I | GTCTC | 4 cut(s) | 152, 341, 851, 1178 |
| AlwI | GGATC | 5 cut(s) | 247, 831, 991, 1557, 1597 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 950 |
| Aor13HI | TCCGGA | 1 cut(s) | 524 |
| AoxI | GGCC | 6 cut(s) | 303, 699, 926, 1121, 1522, 1553 |
| ApeKI | GCWGC | 2 cut(s) | 331, 716 |
| ApoI | RAATTY | 1 cut(s) | 857 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1310, 1342 |
| AsiGI | ACCGGT | 1 cut(s) | 255 |
| AspLEI | GCGC | 1 cut(s) | 34 |
| AspS9I | GGNCC | 5 cut(s) | 258, 1554, 1567, 1616, 1622 |
| AsuHPI | GGTGA | 4 cut(s) | 78, 90, 215, 1453 |
| AvaII | GGWCC | 4 cut(s) | 258, 1567, 1616, 1622 |
| AxyI | CCTNAGG | 1 cut(s) | 1125 |
| BalI | TGGCCA | 1 cut(s) | 1524 |
| BbsI | GAAGAC | 2 cut(s) | 158, 873 |
| Bbv12I | GWGCWC | 1 cut(s) | 56 |
| BbvI | GCAGC | 2 cut(s) | 343, 728 |
| BccI | CCATC | 5 cut(s) | 392, 691, 710, 1034, 1514 |
| BciT130I | CCWGG | 3 cut(s) | 1353, 1581, 1620 |
| BciVI | GTATCC | 1 cut(s) | 1493 |
| BclI | TGATCA | 1 cut(s) | 1099 |
| BcoDI | GTCTC | 4 cut(s) | 152, 341, 851, 1178 |
| BcuI | ACTAGT | 1 cut(s) | 728 |
| BfaI | CTAG | 8 cut(s) | 120, 126, 285, 327, 479, 605, 729, 1055 |
| BfmI | CTRYAG | 3 cut(s) | 195, 714, 1040 |
| BfuAI | ACCTGC | 1 cut(s) | 1518 |
| BfuI | GTATCC | 1 cut(s) | 1493 |
| BisI | GCNGC | 2 cut(s) | 332, 717 |
| BlpI | GCTNAGC | 1 cut(s) | 50 |
| BlsI | GCNGC | 2 cut(s) | 333, 718 |
| BmcAI | AGTACT | 2 cut(s) | 124, 742 |
| Bme1390I | CCNGG | 3 cut(s) | 1353, 1581, 1620 |
| Bme18I | GGWCC | 4 cut(s) | 258, 1567, 1616, 1622 |
| BmgT120I | GGNCC | 5 cut(s) | 258, 1554, 1567, 1616, 1622 |
| BmiI | GGNNCC | 4 cut(s) | 112, 282, 523, 1344 |
| BmrFI | CCNGG | 3 cut(s) | 1353, 1581, 1620 |
| BmsI | GCATC | 3 cut(s) | 168, 493, 920 |
| BpiI | GAAGAC | 2 cut(s) | 158, 873 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 944, 976 |
| BpmI | CTGGAG | 1 cut(s) | 304 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 50 |
| BpuEI | CTTGAG | 4 cut(s) | 386, 617, 996, 1102 |
| BsaI | GGTCTC | 2 cut(s) | 152, 851 |
| BsaJI | CCNNGG | 5 cut(s) | 114, 135, 1314, 1379, 1579 |
| BsaWI | WCCGGW | 2 cut(s) | 255, 524 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1411, 1441 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 81, 107, 255, 327, 1352, 1516, 1586 |
| Bse118I | RCCGGY | 1 cut(s) | 255 |
| Bse1I | ACTGG | 3 cut(s) | 523, 944, 1537 |
| Bse21I | CCTNAGG | 1 cut(s) | 1125 |
| Bse3DI | GCAATG | 3 cut(s) | 675, 726, 1056 |
| BseAI | TCCGGA | 1 cut(s) | 524 |
| BseBI | CCWGG | 3 cut(s) | 1353, 1581, 1620 |
| BseDI | CCNNGG | 5 cut(s) | 114, 135, 1314, 1379, 1579 |
| BseGI | GGATG | 3 cut(s) | 391, 904, 1525 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 81, 107, 255, 327, 1352, 1516, 1586 |
| BseMI | GCAATG | 3 cut(s) | 675, 726, 1056 |
| BseMII | CTCAG | 6 cut(s) | 41, 336, 809, 942, 1139, 1189 |
| BseNI | ACTGG | 3 cut(s) | 523, 944, 1537 |
| BseRI | GAGGAG | 5 cut(s) | 103, 623, 1205, 1419, 1422 |
| BseXI | GCAGC | 2 cut(s) | 343, 728 |
| BseYI | CCCAGC | 1 cut(s) | 1158 |
| BsgI | GTGCAG | 1 cut(s) | 1409 |
| BshFI | GGCC | 6 cut(s) | 305, 701, 928, 1123, 1524, 1555 |
| BshTI | ACCGGT | 1 cut(s) | 255 |
| BsiHKAI | GWGCWC | 1 cut(s) | 56 |
| BsiSI | CCGG | 3 cut(s) | 256, 278, 525 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 81, 107, 255, 327, 1352, 1516, 1586 |
| BsmAI | GTCTC | 4 cut(s) | 152, 341, 851, 1178 |
| BsnI | GGCC | 6 cut(s) | 305, 701, 928, 1123, 1524, 1555 |
| Bso31I | GGTCTC | 2 cut(s) | 152, 851 |
| Bsp1286I | GDGCHC | 1 cut(s) | 56 |
| Bsp13I | TCCGGA | 1 cut(s) | 524 |
| Bsp143I | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 50 |
| BspACI | CCGC | 5 cut(s) | 203, 994, 1067, 1253, 1517 |
| BspANI | GGCC | 6 cut(s) | 305, 701, 928, 1123, 1524, 1555 |
| BspCNI | CTCAG | 6 cut(s) | 42, 337, 808, 943, 1138, 1188 |
| BspEI | TCCGGA | 1 cut(s) | 524 |
| BspLI | GGNNCC | 4 cut(s) | 112, 282, 523, 1344 |
| BspMAI | CTGCAG | 1 cut(s) | 718 |
| BspMI | ACCTGC | 1 cut(s) | 1518 |
| BspPI | GGATC | 5 cut(s) | 247, 831, 991, 1557, 1597 |
| BspTNI | GGTCTC | 2 cut(s) | 152, 851 |
| BsrDI | GCAATG | 3 cut(s) | 675, 726, 1056 |
| BsrFI | RCCGGY | 1 cut(s) | 255 |
| BsrI | ACTGG | 3 cut(s) | 523, 944, 1537 |
| BssAI | RCCGGY | 1 cut(s) | 255 |
| BssECI | CCNNGG | 5 cut(s) | 114, 135, 1314, 1379, 1579 |
| BssMI | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| BssT1I | CCWWGG | 3 cut(s) | 135, 1314, 1379 |
| Bst2UI | CCWGG | 3 cut(s) | 1353, 1581, 1620 |
| Bst4CI | ACNGT | 1 cut(s) | 1396 |
| Bst6I | CTCTTC | 2 cut(s) | 100, 1234 |
| BstC8I | GCNNGC | 2 cut(s) | 19, 1515 |
| BstDEI | CTNAG | 7 cut(s) | 50, 345, 795, 951, 1125, 1175, 1563 |
| BstEII | GGTNACC | 2 cut(s) | 84, 1601 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 79 |
| BstF5I | GGATG | 3 cut(s) | 391, 904, 1525 |
| BstHHI | GCGC | 1 cut(s) | 34 |
| BstKTI | GATC | 8 cut(s) | 242, 781, 826, 986, 1021, 1102, 1552, 1592 |
| BstMAI | GTCTC | 4 cut(s) | 152, 341, 851, 1178 |
| BstMBI | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 367 |
| BstNI | CCWGG | 3 cut(s) | 1353, 1581, 1620 |
| BstNSI | RCATGY | 2 cut(s) | 21, 657 |
| BstPI | GGTNACC | 2 cut(s) | 84, 1601 |
| BstSCI | CCNGG | 3 cut(s) | 1351, 1579, 1618 |
| BstSFI | CTRYAG | 3 cut(s) | 195, 714, 1040 |
| BstV1I | GCAGC | 2 cut(s) | 343, 728 |
| BstV2I | GAAGAC | 2 cut(s) | 158, 873 |
| BstX2I | RGATCY | 2 cut(s) | 983, 1589 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 268, 1532 |
| BstYI | RGATCY | 2 cut(s) | 983, 1589 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1125 |
| BsuI | GTATCC | 1 cut(s) | 1493 |
| BsuRI | GGCC | 6 cut(s) | 305, 701, 928, 1123, 1524, 1555 |
| BtsCI | GGATG | 3 cut(s) | 391, 904, 1525 |
| BtsI | GCAGTG | 1 cut(s) | 1300 |
| BtsIMutI | CAGTG | 2 cut(s) | 1300, 1530 |
| BveI | ACCTGC | 1 cut(s) | 1518 |
| Cac8I | GCNNGC | 2 cut(s) | 19, 1515 |
| CaiI | CAGNNNCTG | 1 cut(s) | 950 |
| CfoI | GCGC | 1 cut(s) | 34 |
| Cfr10I | RCCGGY | 1 cut(s) | 255 |
| Cfr13I | GGNCC | 5 cut(s) | 258, 1554, 1567, 1616, 1622 |
| CseI | GACGC | 1 cut(s) | 776 |
| Csp6I | GTAC | 3 cut(s) | 123, 651, 741 |
| CspAI | ACCGGT | 1 cut(s) | 255 |
| CviAII | CATG | 6 cut(s) | 18, 416, 638, 654, 1022, 1103 |
| CviQI | GTAC | 3 cut(s) | 123, 651, 741 |
| DdeI | CTNAG | 7 cut(s) | 50, 345, 795, 951, 1125, 1175, 1563 |
| DpnI | GATC | 8 cut(s) | 241, 780, 825, 985, 1020, 1101, 1551, 1591 |
| DpnII | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| EaeI | YGGCCR | 1 cut(s) | 1522 |
| Eam1104I | CTCTTC | 2 cut(s) | 100, 1234 |
| EarI | CTCTTC | 2 cut(s) | 100, 1234 |
| Eco130I | CCWWGG | 3 cut(s) | 135, 1314, 1379 |
| Eco147I | AGGCCT | 2 cut(s) | 305, 1123 |
| Eco31I | GGTCTC | 2 cut(s) | 152, 851 |
| Eco32I | GATATC | 2 cut(s) | 1155, 1459 |
| Eco47I | GGWCC | 4 cut(s) | 258, 1567, 1616, 1622 |
| Eco81I | CCTNAGG | 1 cut(s) | 1125 |
| Eco91I | GGTNACC | 2 cut(s) | 84, 1601 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 79 |
| EcoO65I | GGTNACC | 2 cut(s) | 84, 1601 |
| EcoRII | CCWGG | 3 cut(s) | 1351, 1579, 1618 |
| EcoRV | GATATC | 2 cut(s) | 1155, 1459 |
| EcoT14I | CCWWGG | 3 cut(s) | 135, 1314, 1379 |
| ErhI | CCWWGG | 3 cut(s) | 135, 1314, 1379 |
| FaeI | CATG | 6 cut(s) | 21, 419, 641, 657, 1025, 1106 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 689, 721 |
| FatI | CATG | 6 cut(s) | 17, 415, 637, 653, 1021, 1102 |
| FauI | CCCGC | 1 cut(s) | 1074 |
| FauNDI | CATATG | 1 cut(s) | 664 |
| FbaI | TGATCA | 1 cut(s) | 1099 |
| Fnu4HI | GCNGC | 2 cut(s) | 332, 717 |
| FokI | GGATG | 3 cut(s) | 398, 911, 1532 |
| Fsp4HI | GCNGC | 2 cut(s) | 332, 717 |
| FspBI | CTAG | 8 cut(s) | 120, 126, 285, 327, 479, 605, 729, 1055 |
| FspI | TGCGCA | 1 cut(s) | 33 |
| GlaI | GCGC | 1 cut(s) | 33 |
| GluI | GCNGC | 2 cut(s) | 332, 717 |
| GsaI | CCCAGC | 1 cut(s) | 1162 |
| GsuI | CTGGAG | 1 cut(s) | 304 |
| HaeIII | GGCC | 6 cut(s) | 305, 701, 928, 1123, 1524, 1555 |
| HapII | CCGG | 3 cut(s) | 256, 278, 525 |
| HgaI | GACGC | 1 cut(s) | 776 |
| HhaI | GCGC | 1 cut(s) | 34 |
| Hin1II | CATG | 6 cut(s) | 21, 419, 641, 657, 1025, 1106 |
| Hin6I | GCGC | 1 cut(s) | 32 |
| HinP1I | GCGC | 1 cut(s) | 32 |
| HincII | GTYRAC | 3 cut(s) | 376, 511, 726 |
| HindII | GTYRAC | 3 cut(s) | 376, 511, 726 |
| HinfI | GANTC | 9 cut(s) | 220, 298, 349, 528, 601, 1058, 1287, 1448, 1471 |
| HpaI | GTTAAC | 1 cut(s) | 726 |
| HpaII | CCGG | 3 cut(s) | 256, 278, 525 |
| HphI | GGTGA | 4 cut(s) | 78, 90, 215, 1453 |
| Hpy166II | GTNNAC | 9 cut(s) | 261, 376, 430, 511, 726, 734, 1403, 1570, 1616 |
| Hpy188I | TCNGA | 5 cut(s) | 346, 798, 970, 1099, 1308 |
| Hpy188III | TCNNGA | 8 cut(s) | 217, 310, 365, 404, 479, 525, 605, 1013 |
| Hpy8I | GTNNAC | 9 cut(s) | 261, 376, 430, 511, 726, 734, 1403, 1570, 1616 |
| HpyAV | CCTTC | 4 cut(s) | 259, 316, 814, 1233 |
| HpyCH4III | ACNGT | 1 cut(s) | 1396 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 367 |
| HpyF3I | CTNAG | 7 cut(s) | 50, 345, 795, 951, 1125, 1175, 1563 |
| Hsp92II | CATG | 6 cut(s) | 21, 419, 641, 657, 1025, 1106 |
| HspAI | GCGC | 1 cut(s) | 32 |
| Kpn2I | TCCGGA | 1 cut(s) | 524 |
| Ksp22I | TGATCA | 1 cut(s) | 1099 |
| KspAI | GTTAAC | 1 cut(s) | 726 |
| Kzo9I | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| LmnI | GCTCC | 6 cut(s) | 116, 286, 323, 1218, 1348, 1378 |
| Lsp1109I | GCAGC | 2 cut(s) | 343, 728 |
| LweI | GCATC | 3 cut(s) | 168, 493, 920 |
| MaeI | CTAG | 8 cut(s) | 120, 126, 285, 327, 479, 605, 729, 1055 |
| MaeIII | GTNAC | 4 cut(s) | 84, 946, 1006, 1601 |
| MalI | GATC | 8 cut(s) | 241, 780, 825, 985, 1020, 1101, 1551, 1591 |
| MboI | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| MflI | RGATCY | 2 cut(s) | 983, 1589 |
| MhlI | GDGCHC | 1 cut(s) | 56 |
| MlsI | TGGCCA | 1 cut(s) | 1524 |
| MluCI | AATT | 4 cut(s) | 690, 857, 976, 1076 |
| MluNI | TGGCCA | 1 cut(s) | 1524 |
| MlyI | GAGTC | 2 cut(s) | 343, 1296 |
| MmeI | TCCRAC | 1 cut(s) | 613 |
| Mox20I | TGGCCA | 1 cut(s) | 1524 |
| MroI | TCCGGA | 1 cut(s) | 524 |
| MscI | TGGCCA | 1 cut(s) | 1524 |
| MseI | TTAA | 3 cut(s) | 515, 725, 747 |
| MslI | CAYNNNNRTG | 2 cut(s) | 266, 435 |
| Msp20I | TGGCCA | 1 cut(s) | 1524 |
| MspA1I | CMGCKG | 2 cut(s) | 1478, 1628 |
| MspI | CCGG | 3 cut(s) | 256, 278, 525 |
| MspR9I | CCNGG | 3 cut(s) | 1353, 1581, 1620 |
| MvaI | CCWGG | 3 cut(s) | 1353, 1581, 1620 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 367 |
| NdeI | CATATG | 1 cut(s) | 664 |
| NdeII | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| NlaIII | CATG | 6 cut(s) | 21, 419, 641, 657, 1025, 1106 |
| NlaIV | GGNNCC | 4 cut(s) | 112, 282, 523, 1344 |
| NmeAIII | GCCGAG | 2 cut(s) | 95, 828 |
| NmuCI | GTSAC | 2 cut(s) | 84, 1006 |
| NsbI | TGCGCA | 1 cut(s) | 33 |
| NspI | RCATGY | 2 cut(s) | 21, 657 |
| OliI | CACNNNNGTG | 2 cut(s) | 266, 435 |
| PaeI | GCATGC | 1 cut(s) | 21 |
| PceI | AGGCCT | 2 cut(s) | 305, 1123 |
| PciI | ACATGT | 1 cut(s) | 653 |
| PfeI | GAWTC | 7 cut(s) | 220, 298, 528, 601, 1058, 1448, 1471 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1586 |
| PinAI | ACCGGT | 1 cut(s) | 255 |
| PkrI | GCNGC | 2 cut(s) | 333, 718 |
| PleI | GAGTC | 2 cut(s) | 343, 1295 |
| PpsI | GAGTC | 2 cut(s) | 343, 1295 |
| PscI | ACATGT | 1 cut(s) | 653 |
| Psp6I | CCWGG | 3 cut(s) | 1351, 1579, 1618 |
| PspEI | GGTNACC | 2 cut(s) | 84, 1601 |
| PspFI | CCCAGC | 1 cut(s) | 1158 |
| PspGI | CCWGG | 3 cut(s) | 1351, 1579, 1618 |
| PspN4I | GGNNCC | 4 cut(s) | 112, 282, 523, 1344 |
| PspPI | GGNCC | 5 cut(s) | 258, 1554, 1567, 1616, 1622 |
| PstI | CTGCAG | 1 cut(s) | 718 |
| PstNI | CAGNNNCTG | 1 cut(s) | 950 |
| PsuI | RGATCY | 2 cut(s) | 983, 1589 |
| PvuII | CAGCTG | 2 cut(s) | 1478, 1628 |
| RsaI | GTAC | 3 cut(s) | 124, 652, 742 |
| RsaNI | GTAC | 3 cut(s) | 123, 651, 741 |
| RseI | CAYNNNNRTG | 2 cut(s) | 266, 435 |
| SaqAI | TTAA | 3 cut(s) | 515, 725, 747 |
| SatI | GCNGC | 2 cut(s) | 332, 717 |
| Sau3AI | GATC | 8 cut(s) | 239, 778, 823, 983, 1018, 1099, 1549, 1589 |
| Sau96I | GGNCC | 5 cut(s) | 258, 1554, 1567, 1616, 1622 |
| ScaI | AGTACT | 2 cut(s) | 124, 742 |
| SchI | GAGTC | 2 cut(s) | 343, 1296 |
| ScrFI | CCNGG | 3 cut(s) | 1353, 1581, 1620 |
| SduI | GDGCHC | 1 cut(s) | 56 |
| SfaNI | GCATC | 3 cut(s) | 168, 493, 920 |
| SfcI | CTRYAG | 3 cut(s) | 195, 714, 1040 |
| SinI | GGWCC | 4 cut(s) | 258, 1567, 1616, 1622 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 266, 435 |
| SmlI | CTYRAG | 4 cut(s) | 365, 596, 1011, 1117 |
| SmoI | CTYRAG | 4 cut(s) | 365, 596, 1011, 1117 |
| SpeI | ACTAGT | 1 cut(s) | 728 |
| SphI | GCATGC | 1 cut(s) | 21 |
| Sse9I | AATT | 4 cut(s) | 690, 857, 976, 1076 |
| SseBI | AGGCCT | 2 cut(s) | 305, 1123 |
| SsiI | CCGC | 5 cut(s) | 203, 994, 1067, 1253, 1517 |
| SspMI | CTAG | 8 cut(s) | 120, 126, 285, 327, 479, 605, 729, 1055 |
| StuI | AGGCCT | 2 cut(s) | 305, 1123 |
| StyD4I | CCNGG | 3 cut(s) | 1351, 1579, 1618 |
| StyI | CCWWGG | 3 cut(s) | 135, 1314, 1379 |
| TaaI | ACNGT | 1 cut(s) | 1396 |
| TaqI | TCGA | 2 cut(s) | 773, 1084 |
| TasI | AATT | 4 cut(s) | 690, 857, 976, 1076 |
| TatI | WGTACW | 2 cut(s) | 122, 740 |
| TfiI | GAWTC | 7 cut(s) | 220, 298, 528, 601, 1058, 1448, 1471 |
| Tru1I | TTAA | 3 cut(s) | 515, 725, 747 |
| Tru9I | TTAA | 3 cut(s) | 515, 725, 747 |
| TscAI | CASTG | 2 cut(s) | 1300, 1537 |
| TseFI | GTSAC | 2 cut(s) | 84, 1006 |
| TseI | GCWGC | 2 cut(s) | 331, 716 |
| Tsp45I | GTSAC | 2 cut(s) | 84, 1006 |
| TspDTI | ATGAA | 3 cut(s) | 697, 991, 1531 |
| TspGWI | ACGGA | 3 cut(s) | 447, 996, 1562 |
| TspRI | CASTG | 2 cut(s) | 1300, 1537 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1586 |
| VpaK11BI | GGWCC | 4 cut(s) | 258, 1567, 1616, 1622 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 79 |
| XapI | RAATTY | 1 cut(s) | 857 |
| XbaI | TCTAGA | 2 cut(s) | 478, 604 |
| XceI | RCATGY | 2 cut(s) | 21, 657 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 233 |
| XspI | CTAG | 8 cut(s) | 120, 126, 285, 327, 479, 605, 729, 1055 |
| ZrmI | AGTACT | 2 cut(s) | 124, 742 |