Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009337

Physical Location & Seq

Genomic Coordinates Reverse (-)

9540049 .. 9544303

Gene Structure 4255 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G27470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGTTTGAGTACCGGTGCAGCTCCATCGATTGGAAGCCATCTCCGGTGGTAGCTCTGGCCACCAGCGCCGACGGTTCTCAGGTCGCCGCAGCTCGTGAGGATGGTTCTCTTGAGCTCTGGCTCGTCTCTCCCGGTGCTTCCTCTTGGCACTGTCAGCTCATCATTCATGGAGATCCAAAATCGAGAATCTCGCACCTTGCGTGGTTTGGTACTGGTTCTAAAGGTTCTTCTTCCGCTAGATTGTTTTCTTCGAGCATTGATGGCTCAATTTCAGAGTGGGATCTTTTCGACTTGAAGCAGAAGGTCGTCCTAGATTCAATTGGGTTTTCAATCTGGCAAATAGCTCTGGCCCCTATCTCTATTGAAGCAGAAAGTAAAGAAGCTAAGCTGATTCAGAATGGATACTTGAGTGAGAAATCAGACGACGAGGAAGAAAGTGGAGTTGAAGATGATTCAGAGTTGGACGAGCTTGATGAGAAAGTGGAGGCCTTGGATAGGCATCTTGCAGCTGCTTGTGATGATGGCTGTGTGAGGATATATTATATCTCTGAATCTGACAAGTTAACGTACTATAGATCTTTGCCTAGGGTCACTGGTCGTGCTTTAAGTGTGACGTGGAGTGCGGACGCACAGAGGATCTTTTCAGGCAGTAGCGATGGGCTGATAAGATGCTGGGATGCTAATCTATGCCATGAGGTATATAGAATAACAGTTGGACTTGGAGGACTGGGAAATGGGTCTGAGCTCTGCATCTGGTCACTTCTTTCATTGAGATATGGAGTTCTTGTCAGTGGAGATAGTACAGGAAGTGTCCAGTTTTGGGATAGCCAGCATGGAACCCTTTTGCAGGCGCATTCTAATCACAAGGGTGATGTCAATGCTCTTGCAGCATCCCCAAGTCATAACCGGGTGTTTTCTGCAGGCGCTGATGGACAGGTTATTTTATATAAGCTCTCTGGTGGTACATCTAGATCACAAGATTTTAAACCTTCTTCTGCTCAGAAGTGGGATTATATCGGTTGTGTAAGGGCTCATACACATGATATCAGGGCTCTAACTGTTGCAGTGCCAATAAGTTGGGAAGGTTCCATTCCAGATAGGAATGCAAAAGTAACAAGTCCTAAACAGCGCAGGAAGGAGCCGGCTGGTTTCAGTTACCATAAATGGGCACATTTGGGGGTTCCGATGCTCATTTCAGCTGGTGATGATGCCAAGCTTTATGCATACTCGGTTCAAGAGTTTACTAAGTTCCCTCCACATGATATATGTCCTGCGCCTCAGAGAGTGCCCATGCAGATGGTACATAATACAGTGTTCAATCAGACTTCTCTTCTCTTGGTTCAGGATTCTTGTTCTTTAGATATTCTTCGTATTCACATAAGCAATGATTCTAGTGGGCGTGTCTCCACTAAGCCATTGGTTCGTGTTAAAAGTAAAGATGCTCGGAAGATCATATGCAGTGCAATTTCTAACACAGGATCACTTTTTGCTTATTCTGATCAAGTTCGCCCAAGTCTGTTTGAGTTGAAGAAAAATAAAATTGGAAAGAATCCATGGAGTGCTAATAGAAAGCGACTTCCTAATCTTCCGTTTGCCCATTCCATGGTTTTCAGCTGTGACTGCTCTCGGCTGATAATAGCTGGACATGATAGGAGGATATATATTGTTGACGTTGGTAGCATGGAGTTATTACATTCTTTTACACCACGCCAGGAGGGACAGGAAGGTGAATCTCCTCCTCATGAGCCTCCAATTACAAAACTGTATACTAGCTCAAATGATGATTGGTTAGCTGCTATCAATTGCTTTGGGGACATATATGTGTTCAACCTGGAAACGCAGAGGCAGCATTGGTTCATATCAAGGCTTGATGGTGCATCTGTTGCAGCCGCTGGTTTTCATCCGAGGGACAACAATGTGATTGTGATCTCCACCTCTTCAAACCAGGTCTTTGCATTGGATGTGGAGGCTAGAGAGTTGAGCAAGTGGTCATTGCTGCAGACTTTTTGTCTGCCAAAGAGCTACCAAAATTTTCCTGGTGAGGTCGTAGGACTCTCATTCTCTCCATCACCATGTTCATCATCTGTCATCATTTACAGCTCCAGAGCTAAGTGTTTGATTGAATTTGGGAAGCCGGCGGAACAAGACGAAGACACGGATACACCATGCAATCTGTCCGAAAAGCTAGAAGGTAAACTTGCAAGCATTAGTATGAAATTGGGGAATGGTGCTCAAAAACGTAGGTTAGAGGAGTATCAAAAAGAGAGTAAGAGTAATAAGAGAAAGAAGTTTGAAATGGTAACCTCAAAGCACCCAGTTCTATATTTACGACATCTATCAAAAAGTGCAATCTTGGTTATAGAGAAACCATGGATGGAGGTTATCAAGAATTTGGATACACAACCAGTTCACAGACATATATTCGGGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0010015 GO:0010051 GO:0010073 GO:0010101 GO:0010102 GO:0010154 GO:0010305 GO:0010311 GO:0010449 GO:0010817 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0032879 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051049 GO:0061458 GO:0065007 GO:0065008 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

810

Amino Acids

89.78

Weight (kDa)

6.71

Isoelectric Point (pI)

40.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_1st	PF25173	165 - 318	2.1e-12	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	166 - 320	4.8e-12	THOC3 beta-propeller domain
WDR55	PF24796	167 - 321	4.3e-09	WDR55
WD40_CDC20-Fz	PF24807	184 - 322	1.9e-09	CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd	PF25047	186 - 320	5.4e-07	TEP-1 second beta-propeller
Beta-prop_WDR90_POC16_2nd	PF23393	261 - 319	1.3e-06	WDR90/POC16, second beta-propeller
WD40_Prp19	PF24814	261 - 353	7.8e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27470 AT4G07410 AT4G07410
fragaria_vesca	FvH4_2g32880 FvH4_2g32880 FvH4_2g32880 FvH4_2g32880
malus_domestica	MD08G1080300.v1.1 MD15G1067400.v1.1
prunus_persica	Prupe.1G421300_v2.0.a1
pyrus_communis	pycom08g06630 pycom15g06390
rosa_chinensis	RchiOBHm_Chr6g0309831
rosa_laevigata	RLG00000010532
rosa_multiflora	Rmu_ssc0000373.1_g000003
rosa_roxburghii	Rroxscaffold_7G00159140
rosa_rugosa	Rorug06G0375100
rosa_samantha	Rh6AG488600 Rh6BG498100 Rh6CG502900 Rh6DG489000
rosa_wichuraiana	Rw6G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	30, 1603
AccI	GTMKAC	1 cut(s)	1766
AciI	CCGC	5 cut(s)	87, 234, 623, 1890, 2138
AclWI	GGATC	4 cut(s)	167, 288, 644, 1486
AcoI	YGGCCR	1 cut(s)	57
AcsI	RAATTY	3 cut(s)	2029, 2123, 2389
AfaI	GTAC	6 cut(s)	11, 211, 569, 802, 964, 1302
AfiI	CCNNNNNNNGG	6 cut(s)	30, 495, 820, 847, 1165, 1603
AgeI	ACCGGT	1 cut(s)	12
AhdI	GACNNNNNGTC	1 cut(s)	2007
AjiI	CACGTC	1 cut(s)	615
AjnI	CCWGG	4 cut(s)	1710, 1830, 1944, 2035
AleI	CACNNNNGTG	1 cut(s)	867
Alw21I	GWGCWC	3 cut(s)	117, 747, 2233
Alw26I	GTCTC	2 cut(s)	130, 1408
AlwI	GGATC	4 cut(s)	167, 288, 644, 1486
AlwNI	CAGNNNCTG	2 cut(s)	926, 1892
AoxI	GGCC	3 cut(s)	57, 348, 486
ApeKI	GCWGC	9 cut(s)	18, 89, 506, 509, 887, 1793, 1846, 1886, 1996
ApoI	RAATTY	3 cut(s)	2029, 2123, 2389
AsiGI	ACCGGT	1 cut(s)	12
AspA2I	CCTAGG	1 cut(s)	584
AspLEI	GCGC	5 cut(s)	68, 853, 926, 1131, 1276
AspS9I	GGNCC	1 cut(s)	349
AsuC2I	CCSGG	2 cut(s)	132, 908
AsuHPI	GGTGA	5 cut(s)	881, 1214, 1739, 2051, 2061
AvrII	CCTAGG	1 cut(s)	584
BaeGI	GKGCMC	2 cut(s)	1171, 1290
BaeI	ACNNNNGTAYC	2 cut(s)	394, 427
BalI	TGGCCA	1 cut(s)	59
BanII	GRGCYC	4 cut(s)	117, 747, 1033, 1054
BauI	CACGAG	1 cut(s)	93
BbsI	GAAGAC	1 cut(s)	2157
Bbv12I	GWGCWC	3 cut(s)	117, 747, 2233
BbvI	GCAGC	9 cut(s)	30, 101, 496, 518, 899, 1780, 1858, 1898, 1983
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	4 cut(s)	1712, 1832, 1946, 2037
BciVI	GTATCC	3 cut(s)	395, 2152, 2389
BclI	TGATCA	1 cut(s)	1498
BcnI	CCSGG	2 cut(s)	132, 908
BcoDI	GTCTC	2 cut(s)	130, 1408
BfaI	CTAG	8 cut(s)	237, 311, 585, 969, 1392, 1770, 1971, 2186
BfmI	CTRYAG	3 cut(s)	571, 918, 1997
BfoI	RGCGCY	2 cut(s)	69, 927
BfuI	GTATCC	3 cut(s)	395, 2152, 2389
BglII	AGATCT	1 cut(s)	575
BlnI	CCTAGG	1 cut(s)	584
BlpI	GCTNAGC	1 cut(s)	384
Bme1390I	CCNGG	6 cut(s)	132, 908, 1712, 1832, 1946, 2037
BmeRI	GACNNNNNGTC	1 cut(s)	2007
BmgBI	CACGTC	1 cut(s)	615
BmgT120I	GGNCC	1 cut(s)	349
BmiI	GGNNCC	5 cut(s)	351, 838, 1087, 1140, 1182
BmrFI	CCNGG	6 cut(s)	132, 908, 1712, 1832, 1946, 2037
BmrI	ACTGGG	2 cut(s)	737, 2309
BmsI	GCATC	9 cut(s)	508, 659, 667, 759, 899, 1176, 1198, 1429, 1886
BmuI	ACTGGG	2 cut(s)	737, 2309
BpiI	GAAGAC	1 cut(s)	2157
BpmI	CTGGAG	1 cut(s)	2086
Bpu1102I	GCTNAGC	1 cut(s)	384
BpuEI	CTTGAG	2 cut(s)	131, 427
BpuMI	CCSGG	2 cut(s)	132, 908
Bsa29I	ATCGAT	1 cut(s)	27
BsaBI	GATNNNNATC	3 cut(s)	498, 681, 1925
BsaJI	CCNNGG	6 cut(s)	489, 584, 1553, 1602, 1904, 2369
BsaWI	WCCGGW	2 cut(s)	12, 43
BsaXI	ACNNNNNCTCC	2 cut(s)	771, 801
Bsc4I	CCNNNNNNNGG	6 cut(s)	30, 495, 820, 847, 1165, 1603
Bse118I	RCCGGY	3 cut(s)	12, 1141, 2134
Bse1I	ACTGG	6 cut(s)	217, 598, 732, 814, 2315, 2405
Bse3DI	GCAATG	2 cut(s)	1390, 1991
Bse8I	GATNNNNATC	3 cut(s)	498, 681, 1925
BseBI	CCWGG	4 cut(s)	1712, 1832, 1946, 2037
BseCI	ATCGAT	1 cut(s)	27
BseDI	CCNNGG	6 cut(s)	489, 584, 1553, 1602, 1904, 2369
BseGI	GGATG	6 cut(s)	106, 682, 890, 1900, 1966, 2379
BseJI	GATNNNNATC	3 cut(s)	498, 681, 1925
BseLI	CCNNNNNNNGG	6 cut(s)	30, 495, 820, 847, 1165, 1603
BseMI	GCAATG	2 cut(s)	1390, 1991
BseMII	CTCAG	4 cut(s)	92, 732, 1013, 1292
BseNI	ACTGG	6 cut(s)	217, 598, 732, 814, 2315, 2405
BseRI	GAGGAG	3 cut(s)	1725, 1728, 2264
BseSI	GKGCMC	2 cut(s)	1171, 1290
BseXI	GCAGC	9 cut(s)	30, 101, 496, 518, 899, 1780, 1858, 1898, 1983
BseYI	CCCAGC	1 cut(s)	672
BsgI	GTGCAG	1 cut(s)	37
BshFI	GGCC	3 cut(s)	59, 350, 488
BshTI	ACCGGT	1 cut(s)	12
BshVI	ATCGAT	1 cut(s)	27
BsiHKAI	GWGCWC	3 cut(s)	117, 747, 2233
BsiSI	CCGG	6 cut(s)	13, 44, 132, 907, 1142, 2135
BslFI	GGGAC	3 cut(s)	1731, 1826, 1922
BslI	CCNNNNNNNGG	6 cut(s)	30, 495, 820, 847, 1165, 1603
BsmAI	GTCTC	2 cut(s)	130, 1408
BsmBI	CGTCTC	1 cut(s)	130
BsmFI	GGGAC	3 cut(s)	1731, 1826, 1922
BsmI	GAATGC	2 cut(s)	853, 1108
BsnI	GGCC	3 cut(s)	59, 350, 488
Bsp1286I	GDGCHC	7 cut(s)	117, 747, 1033, 1054, 1171, 1290, 2233
Bsp143I	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
Bsp1720I	GCTNAGC	1 cut(s)	384
Bsp19I	CCATGG	3 cut(s)	1553, 1602, 2369
BspACI	CCGC	5 cut(s)	87, 234, 623, 1890, 2138
BspANI	GGCC	3 cut(s)	59, 350, 488
BspCNI	CTCAG	4 cut(s)	91, 733, 1012, 1291
BspDI	ATCGAT	1 cut(s)	27
BspHI	TCATGA	1 cut(s)	1741
BspLI	GGNNCC	5 cut(s)	351, 838, 1087, 1140, 1182
BspMAI	CTGCAG	2 cut(s)	922, 2001
BspPI	GGATC	4 cut(s)	167, 288, 644, 1486
BsrDI	GCAATG	2 cut(s)	1390, 1991
BsrFI	RCCGGY	3 cut(s)	12, 1141, 2134
BsrI	ACTGG	6 cut(s)	217, 598, 732, 814, 2315, 2405
BssAI	RCCGGY	3 cut(s)	12, 1141, 2134
BssECI	CCNNGG	6 cut(s)	489, 584, 1553, 1602, 1904, 2369
BssMI	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
BssNAI	GTATAC	1 cut(s)	1767
BssSI	CACGAG	1 cut(s)	93
BssT1I	CCWWGG	5 cut(s)	489, 584, 1553, 1602, 2369
Bst1107I	GTATAC	1 cut(s)	1767
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	4 cut(s)	1712, 1832, 1946, 2037
Bst4CI	ACNGT	6 cut(s)	74, 152, 712, 1060, 1312, 1764
Bst6I	CTCTTC	2 cut(s)	1335, 1942
BstAPI	GCANNNNNTGC	1 cut(s)	1883
BstC8I	GCNNGC	6 cut(s)	830, 849, 922, 1143, 2136, 2203
BstDEI	CTNAG	8 cut(s)	78, 384, 741, 999, 1245, 1278, 1410, 2109
BstDSI	CCRYGG	3 cut(s)	1553, 1602, 2369
BstEII	GGTNACC	1 cut(s)	2299
BstENI	CCTNNNNNAGG	2 cut(s)	493, 845
BstF5I	GGATG	6 cut(s)	106, 682, 890, 1900, 1966, 2379
BstH2I	RGCGCY	2 cut(s)	69, 927
BstHHI	GCGC	5 cut(s)	68, 853, 926, 1131, 1276
BstKTI	GATC	9 cut(s)	175, 283, 578, 639, 974, 1452, 1481, 1501, 1929
BstMAI	GTCTC	2 cut(s)	130, 1408
BstMBI	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
BstMWI	GCNNNNNNNGC	7 cut(s)	65, 154, 261, 887, 1620, 1846, 1883
BstNI	CCWGG	4 cut(s)	1712, 1832, 1946, 2037
BstPI	GGTNACC	1 cut(s)	2299
BstSCI	CCNGG	6 cut(s)	130, 906, 1710, 1830, 1944, 2035
BstSFI	CTRYAG	3 cut(s)	571, 918, 1997
BstSLI	GKGCMC	2 cut(s)	1171, 1290
BstV1I	GCAGC	9 cut(s)	30, 101, 496, 518, 899, 1780, 1858, 1898, 1983
BstV2I	GAAGAC	1 cut(s)	2157
BstX2I	RGATCY	4 cut(s)	172, 280, 575, 636
BstXI	CCANNNNNNTGG	2 cut(s)	1077, 1297
BstYI	RGATCY	4 cut(s)	172, 280, 575, 636
BstZ17I	GTATAC	1 cut(s)	1767
Bsu15I	ATCGAT	1 cut(s)	27
BsuI	GTATCC	3 cut(s)	395, 2152, 2389
BsuRI	GGCC	3 cut(s)	59, 350, 488
BsuTUI	ATCGAT	1 cut(s)	27
BtgI	CCRYGG	3 cut(s)	1553, 1602, 2369
BtgZI	GCGATG	1 cut(s)	669
BtrI	CACGTC	1 cut(s)	615
BtsCI	GGATG	6 cut(s)	106, 682, 890, 1900, 1966, 2379
BtsI	GCAGTG	2 cut(s)	1071, 1465
BtsIMutI	CAGTG	6 cut(s)	148, 591, 796, 1071, 1317, 1465
Cac8I	GCNNGC	6 cut(s)	830, 849, 922, 1143, 2136, 2203
CaiI	CAGNNNCTG	2 cut(s)	926, 1892
CciI	TCATGA	1 cut(s)	1741
CfoI	GCGC	5 cut(s)	68, 853, 926, 1131, 1276
Cfr10I	RCCGGY	3 cut(s)	12, 1141, 2134
Cfr13I	GGNCC	1 cut(s)	349
ClaI	ATCGAT	1 cut(s)	27
CseI	GACGC	1 cut(s)	635
CsiI	ACCWGGT	1 cut(s)	1944
Csp6I	GTAC	6 cut(s)	10, 210, 568, 801, 963, 1301
CspAI	ACCGGT	1 cut(s)	12
CviQI	GTAC	6 cut(s)	10, 210, 568, 801, 963, 1301
DdeI	CTNAG	8 cut(s)	78, 384, 741, 999, 1245, 1278, 1410, 2109
DpnI	GATC	9 cut(s)	174, 282, 577, 638, 973, 1451, 1480, 1500, 1928
DpnII	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
DraI	TTTAAA	1 cut(s)	985
DriI	GACNNNNNGTC	1 cut(s)	2007
EaeI	YGGCCR	1 cut(s)	57
Eam1104I	CTCTTC	2 cut(s)	1335, 1942
Eam1105I	GACNNNNNGTC	1 cut(s)	2007
EarI	CTCTTC	2 cut(s)	1335, 1942
EciI	GGCGGA	1 cut(s)	2153
Ecl136II	GAGCTC	2 cut(s)	115, 745
Eco130I	CCWWGG	5 cut(s)	489, 584, 1553, 1602, 2369
Eco147I	AGGCCT	1 cut(s)	488
Eco24I	GRGCYC	4 cut(s)	117, 747, 1033, 1054
Eco32I	GATATC	1 cut(s)	1045
Eco53kI	GAGCTC	2 cut(s)	115, 745
Eco91I	GGTNACC	1 cut(s)	2299
EcoICRI	GAGCTC	2 cut(s)	115, 745
EcoNI	CCTNNNNNAGG	2 cut(s)	493, 845
EcoO65I	GGTNACC	1 cut(s)	2299
EcoRII	CCWGG	4 cut(s)	1710, 1830, 1944, 2035
EcoRV	GATATC	1 cut(s)	1045
EcoT14I	CCWWGG	5 cut(s)	489, 584, 1553, 1602, 2369
EcoT22I	ATGCAT	1 cut(s)	1225
EcoT38I	GRGCYC	4 cut(s)	117, 747, 1033, 1054
ErhI	CCWWGG	5 cut(s)	489, 584, 1553, 1602, 2369
Esp3I	CGTCTC	1 cut(s)	130
FalI	AAGNNNNNCTT	2 cut(s)	2181, 2213
FaqI	GGGAC	3 cut(s)	1731, 1826, 1922
FauNDI	CATATG	1 cut(s)	1454
FbaI	TGATCA	1 cut(s)	1498
FblI	GTMKAC	1 cut(s)	1766
FokI	GGATG	6 cut(s)	113, 689, 877, 1887, 1973, 2386
FriOI	GRGCYC	4 cut(s)	117, 747, 1033, 1054
FspBI	CTAG	8 cut(s)	237, 311, 585, 969, 1392, 1770, 1971, 2186
GlaI	GCGC	5 cut(s)	67, 852, 925, 1130, 1275
GsaI	CCCAGC	1 cut(s)	676
GsuI	CTGGAG	1 cut(s)	2086
HaeII	RGCGCY	2 cut(s)	69, 927
HaeIII	GGCC	3 cut(s)	59, 350, 488
HapII	CCGG	6 cut(s)	13, 44, 132, 907, 1142, 2135
HgaI	GACGC	1 cut(s)	635
HhaI	GCGC	5 cut(s)	68, 853, 926, 1131, 1276
Hin6I	GCGC	5 cut(s)	66, 851, 924, 1129, 1274
HinP1I	GCGC	5 cut(s)	66, 851, 924, 1129, 1274
HincII	GTYRAC	2 cut(s)	564, 1669
HindII	GTYRAC	2 cut(s)	564, 1669
HindIII	AAGCTT	1 cut(s)	1214
HpaI	GTTAAC	1 cut(s)	564
HpaII	CCGG	6 cut(s)	13, 44, 132, 907, 1142, 2135
HphI	GGTGA	5 cut(s)	881, 1214, 1739, 2051, 2061
Hpy166II	GTNNAC	6 cut(s)	564, 1242, 1669, 1767, 2195, 2410
Hpy8I	GTNNAC	6 cut(s)	564, 1242, 1669, 1767, 2195, 2410
Hpy99I	CGWCG	2 cut(s)	74, 428
HpyAV	CCTTC	6 cut(s)	295, 999, 1076, 1129, 1718, 2183
HpyCH4III	ACNGT	6 cut(s)	74, 152, 712, 1060, 1312, 1764
HpyCH4IV	ACGT	4 cut(s)	566, 614, 1671, 2239
HpyF10VI	GCNNNNNNNGC	7 cut(s)	65, 154, 261, 887, 1620, 1846, 1883
HpyF3I	CTNAG	8 cut(s)	78, 384, 741, 999, 1245, 1278, 1410, 2109
HpySE526I	ACGT	4 cut(s)	566, 614, 1671, 2239
HspAI	GCGC	5 cut(s)	66, 851, 924, 1129, 1274
KroI	GCCGGC	2 cut(s)	1141, 2134
KroNI	GCCGGC	2 cut(s)	1143, 2136
Ksp22I	TGATCA	1 cut(s)	1498
KspAI	GTTAAC	1 cut(s)	564
Kzo9I	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
LmnI	GCTCC	3 cut(s)	26, 1138, 2105
Lsp1109I	GCAGC	9 cut(s)	30, 101, 496, 518, 899, 1780, 1858, 1898, 1983
LweI	GCATC	9 cut(s)	508, 659, 667, 759, 899, 1176, 1198, 1429, 1886
MabI	ACCWGGT	1 cut(s)	1944
MaeI	CTAG	8 cut(s)	237, 311, 585, 969, 1392, 1770, 1971, 2186
MaeII	ACGT	4 cut(s)	566, 614, 1671, 2239
MaeIII	GTNAC	7 cut(s)	589, 610, 756, 1111, 1154, 1616, 2299
MalI	GATC	9 cut(s)	174, 282, 577, 638, 973, 1451, 1480, 1500, 1928
MboI	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
MfeI	CAATTG	2 cut(s)	318, 1801
MflI	RGATCY	4 cut(s)	172, 280, 575, 636
MhlI	GDGCHC	7 cut(s)	117, 747, 1033, 1054, 1171, 1290, 2233
MlsI	TGGCCA	1 cut(s)	59
MluNI	TGGCCA	1 cut(s)	59
MlyI	GAGTC	1 cut(s)	2046
MmeI	TCCRAC	2 cut(s)	441, 694
Mox20I	TGGCCA	1 cut(s)	59
Mph1103I	ATGCAT	1 cut(s)	1225
MroNI	GCCGGC	2 cut(s)	1141, 2134
MscI	TGGCCA	1 cut(s)	59
MseI	TTAA	4 cut(s)	563, 605, 984, 1428
MslI	CAYNNNNRTG	6 cut(s)	867, 1038, 1295, 1820, 2071, 2210
Msp20I	TGGCCA	1 cut(s)	59
MspA1I	CMGCKG	4 cut(s)	509, 1199, 1614, 1892
MspI	CCGG	6 cut(s)	13, 44, 132, 907, 1142, 2135
MspR9I	CCNGG	6 cut(s)	132, 908, 1712, 1832, 1946, 2037
MunI	CAATTG	2 cut(s)	318, 1801
Mva1269I	GAATGC	2 cut(s)	853, 1108
MvaI	CCWGG	4 cut(s)	1712, 1832, 1946, 2037
MwoI	GCNNNNNNNGC	7 cut(s)	65, 154, 261, 887, 1620, 1846, 1883
NaeI	GCCGGC	2 cut(s)	1143, 2136
NciI	CCSGG	2 cut(s)	132, 908
NcoI	CCATGG	3 cut(s)	1553, 1602, 2369
NdeI	CATATG	1 cut(s)	1454
NdeII	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
NgoMIV	GCCGGC	2 cut(s)	1141, 2134
NlaIV	GGNNCC	5 cut(s)	351, 838, 1087, 1140, 1182
NmeAIII	GCCGAG	1 cut(s)	1606
NmuCI	GTSAC	4 cut(s)	589, 610, 756, 1616
NsiI	ATGCAT	1 cut(s)	1225
OliI	CACNNNNGTG	1 cut(s)	867
PagI	TCATGA	1 cut(s)	1741
PceI	AGGCCT	1 cut(s)	488
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	2 cut(s)	853, 1108
PdiI	GCCGGC	2 cut(s)	1143, 2136
PfeI	GAWTC	9 cut(s)	186, 314, 391, 452, 551, 1346, 1388, 1549, 1730
PflMI	CCANNNNNTGG	2 cut(s)	30, 1603
PinAI	ACCGGT	1 cut(s)	12
PleI	GAGTC	1 cut(s)	2046
PpsI	GAGTC	1 cut(s)	2046
Psp124BI	GAGCTC	2 cut(s)	117, 747
Psp6I	CCWGG	4 cut(s)	1710, 1830, 1944, 2035
PspEI	GGTNACC	1 cut(s)	2299
PspFI	CCCAGC	1 cut(s)	672
PspGI	CCWGG	4 cut(s)	1710, 1830, 1944, 2035
PspN4I	GGNNCC	5 cut(s)	351, 838, 1087, 1140, 1182
PspPI	GGNCC	1 cut(s)	349
PstI	CTGCAG	2 cut(s)	922, 2001
PstNI	CAGNNNCTG	2 cut(s)	926, 1892
PsuI	RGATCY	4 cut(s)	172, 280, 575, 636
PvuII	CAGCTG	3 cut(s)	509, 1199, 1614
RsaI	GTAC	6 cut(s)	11, 211, 569, 802, 964, 1302
RsaNI	GTAC	6 cut(s)	10, 210, 568, 801, 963, 1301
RseI	CAYNNNNRTG	6 cut(s)	867, 1038, 1295, 1820, 2071, 2210
SacI	GAGCTC	2 cut(s)	117, 747
SaqAI	TTAA	4 cut(s)	563, 605, 984, 1428
Sau3AI	GATC	9 cut(s)	172, 280, 575, 636, 971, 1449, 1478, 1498, 1926
Sau96I	GGNCC	1 cut(s)	349
SchI	GAGTC	1 cut(s)	2046
ScrFI	CCNGG	6 cut(s)	132, 908, 1712, 1832, 1946, 2037
SduI	GDGCHC	7 cut(s)	117, 747, 1033, 1054, 1171, 1290, 2233
SexAI	ACCWGGT	1 cut(s)	1944
SfaNI	GCATC	9 cut(s)	508, 659, 667, 759, 899, 1176, 1198, 1429, 1886
SfcI	CTRYAG	3 cut(s)	571, 918, 1997
SmiMI	CAYNNNNRTG	6 cut(s)	867, 1038, 1295, 1820, 2071, 2210
SmlI	CTYRAG	2 cut(s)	110, 406
SmoI	CTYRAG	2 cut(s)	110, 406
SseBI	AGGCCT	1 cut(s)	488
SsiI	CCGC	5 cut(s)	87, 234, 623, 1890, 2138
SspMI	CTAG	8 cut(s)	237, 311, 585, 969, 1392, 1770, 1971, 2186
SstI	GAGCTC	2 cut(s)	117, 747
StuI	AGGCCT	1 cut(s)	488
StyD4I	CCNGG	6 cut(s)	130, 906, 1710, 1830, 1944, 2035
StyI	CCWWGG	5 cut(s)	489, 584, 1553, 1602, 2369
TaaI	ACNGT	6 cut(s)	74, 152, 712, 1060, 1312, 1764
TaiI	ACGT	4 cut(s)	569, 617, 1674, 2242
TaqI	TCGA	4 cut(s)	27, 182, 251, 288
TatI	WGTACW	1 cut(s)	800
TauI	GCSGC	2 cut(s)	89, 1892
TfiI	GAWTC	9 cut(s)	186, 314, 391, 452, 551, 1346, 1388, 1549, 1730
Tru1I	TTAA	4 cut(s)	563, 605, 984, 1428
Tru9I	TTAA	4 cut(s)	563, 605, 984, 1428
TscAI	CASTG	6 cut(s)	155, 598, 796, 1071, 1317, 1465
TseFI	GTSAC	4 cut(s)	589, 610, 756, 1616
TseI	GCWGC	9 cut(s)	18, 89, 506, 509, 887, 1793, 1846, 1886, 1996
Tsp45I	GTSAC	4 cut(s)	589, 610, 756, 1616
TspDTI	ATGAA	6 cut(s)	155, 756, 1846, 1889, 2067, 2228
TspGWI	ACGGA	2 cut(s)	1578, 2171
TspRI	CASTG	6 cut(s)	155, 598, 796, 1071, 1317, 1465
Van91I	CCANNNNNTGG	2 cut(s)	30, 1603
XagI	CCTNNNNNAGG	2 cut(s)	493, 845
XapI	RAATTY	3 cut(s)	2029, 2123, 2389
XbaI	TCTAGA	1 cut(s)	968
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1414, 2033
XmaJI	CCTAGG	1 cut(s)	584
XmiI	GTMKAC	1 cut(s)	1766
XspI	CTAG	8 cut(s)	237, 311, 585, 969, 1392, 1770, 1971, 2186
Zsp2I	ATGCAT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.