Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009337

Physical Location & Seq

Genomic Coordinates Reverse (-)

4200506 .. 4205356

Gene Structure 4851 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G07410.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGCTCGAGTACCGTTGCAGCTCCGTTGACTGGAAACCATCACCGGTGGTAGCCCTAGCTAACAGCTCCGACGACTCTCAAGTCGCCGCCGCTCGCGAGGACGGTTCTCTTGAAATCTGGCTCGTCTCCCCCGGCGCCGTCGGATGGCACTGTCAACTCACTATCCATGGCGATCCAAATTCGAGAATCTCGTCTCTTGCGTGGTGCTGTTCTCCTTCTATAGGGCTTCCTTCTGGTCGGTTATTCTCCTCTAGCATCGATGGCTCTATTTCTGAATGGGATCTTTTCGATTTGAAGCAGAAGATTGTGCTTGAGTCTATTGGAATCTCGATATGGCAAATGGCATTGGCTCCGATTAGCGGATTCTCGAGTGATGTAGAAGGTATTAAGAATGGATACTTGAGTGAGAAATCGAATGATGAGGAAGAGATTGGGAGTGAAGAAGATGGTTCTGATTCCGATGAGTTTCATGAGAAGTCAGAGGAGGAGATAGATAGGATTCTTGCAGCTGCTTGTGATGATGGTTGTGTGAGACTGTACCGTATCTCTAATTTAGAAAAGTTAACTTACTATAGATCATTGCCTAGGGTCAGTGGACGTGCTTTAAGTGTAACATGGAGTCCAGATGCAAAAAGGATCTTTTCGGGGAGCAGTGATGGGCTGATAAGATGCTGGGACGCTACCTCGTGTCATGAGGTATACAGAATTACAGCTGGTCTTGGTGGACTAGGAAGTAGTTCTGAGATCTGTGTTTGGTCACTTCTTTCGTTGAGGTGTTCAGTTCTTGTGAGTGGAGATAGTACAGGAACTGTCCAGTTTTGGGATAGTGAGCATGGAACCCTTTTGGAAGCACACTCTAATCACAAAGGTGATGTCAATACTCTTGCAGCAGCCCCCAGCCATAATCGAGTCTTTTCTGCTGGTGCGGATGGACAGGTTATCCTTTATAAGCTCTCTGGTAGTACTAACGGTTCTCAAGATTTGAAGCCTTCTTCCTCTCAGAAATGGGACTATATTGGTTATGTCAAGGCTCATACACATGACATCAGAGCTCTTACAGTTGCTGTACCAATTAGTCGAGAAGATCCTTTTCCGGATGATATACTGCCAGATAAAGCGAGTCGTAAACATCGCAAAAAGGGGAAGCCGGTTGACTTCACTTATCATAAATGGGCTCATTTGGGTGTTCCGATGCTTATTTCTGCTGGTGATGATGCAAAGCTTTTTGCATATTCAATTCAGGAATTTACTAAGTTCTCCCCACATGATATATGTCCTGCGCCTCAGAGAATACCCATGCAAATGGTACATAATTCGATGTTCAATAAGACTTCTCTTCTACTGGTTCAGGGTATTAGTACTTTAGATATTCTTCGACTTAATATAAGCAGTGATTCTAGTGGTCGTGCCTCAACAAAGTCATTGGTTCGTGTTAAAAGTAGAGATGCCCGAAAGATCATATGCAGTGCAATTTCTAACACCGGATCACATTTTGCTTACTCTGACCAAATTGGCCCCAGTCTGTTCGAGTTGAAGAAAAATGAATTTACAAAGTGTCCATGGAGTGTTAGTAGAAGGCGACTTCCTGAACTTCCATTTGCACATTCCATGATTTTCAGTTCGGACTGCTCTCGTCTAATAATAGCAGGGCATGATAGAAGGATATATACTATTGACATAAGTAGTTTGGAACTAGTATATGCATTTACACCATCTAGGGAGGAGCATGAAGGTGAAGCTCCAACACCTAAGGAGCCTCCAATAACAAAATTGTTTACTAGCTCAGATGGTCAGTGGCTAGCTGCTATCAATTGCTTTGGGGACATCTATGTATTCAACCTCGAAACACAAAGGCAGCACTGGTTCATTTCAAGACTCGATGGTGCATCTGTTACCGCTGCTGGATTTCATCCCTGGAATAACAATGCACTTGTGATCTCAACCTCCTCGAATCAGGTCTTTGCTTTTGATGTAGAAGCTAGACAGTTAGGCAAGTGGTCGTTGCTAAACACTTATGTTCTGCCAAAGAGGTATCAAGAGTTTCCTGGGGAGGTCCTTGGACTCTCATTCTCCCCGTCACCAAATTCATCATCTGTGATAGTTTACAGTTCCAGAGCGAAATGTTTGATCGACTTCGGGAAGCCTGTGGAAGAAGATGAAGAGTATGATTTACCAAACGGCAATTTGTCTAAAACGCTAGAAGGTAAACTTGTCAACTTGGGCTTGAAAAAGGGAAAGGGTACAAACCGAAAACGTCGGTTAGATGAGTATCAGTTAGAGGGTAAGAGTAATGAACGAAAGAACTTCGAAATCTTACCTTCAAACCACCCTGTTTTATTCGTGGGTCACCTTTCTAAAAACTCAATCCTGGTGATAGAGAAACCATGGATGGATGTTGTCAAGAGTTTGGATAATCAACCAGTAGACAGACATATTTTTGGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0010015 GO:0010051 GO:0010073 GO:0010101 GO:0010102 GO:0010154 GO:0010305 GO:0010311 GO:0010449 GO:0010817 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0032879 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051049 GO:0061458 GO:0065007 GO:0065008 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

815

Amino Acids

90.27

Weight (kDa)

6.08

Isoelectric Point (pI)

42.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR3_1st	PF25173	164 - 318	2.4e-13	WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	165 - 322	9.7e-09	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	166 - 319	1.5e-13	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	166 - 318	1.7e-12	WDR5 beta-propeller domain
WDR55	PF24796	166 - 320	5.7e-10	WDR55
WD40_CDC20-Fz	PF24807	192 - 323	6.9e-11	CDC20/Fizzy WD40 domain
Beta-prop_WDR90_POC16_2nd	PF23393	217 - 320	8.7e-09	WDR90/POC16, second beta-propeller
WD40_Prp19	PF24814	257 - 354	2.4e-06	Prp19 WD40 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27470 AT4G07410 AT4G07410
fragaria_vesca	FvH4_2g32880 FvH4_2g32880 FvH4_2g32880 FvH4_2g32880
malus_domestica	MD08G1080300.v1.1 MD15G1067400.v1.1
prunus_persica	Prupe.1G421300_v2.0.a1
pyrus_communis	pycom08g06630 pycom15g06390
rosa_chinensis	RchiOBHm_Chr6g0309831
rosa_laevigata	RLG00000010532
rosa_multiflora	Rmu_ssc0000373.1_g000003
rosa_roxburghii	Rroxscaffold_7G00159140
rosa_rugosa	Rorug06G0375100
rosa_samantha	Rh6AG488600 Rh6BG498100 Rh6CG502900 Rh6DG489000
rosa_wichuraiana	Rw6G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	948
AasI	GACNNNNNNGTC	1 cut(s)	80
AccB1I	GGYRCC	1 cut(s)	134
AccBSI	CCGCTC	1 cut(s)	92
AccI	GTMKAC	2 cut(s)	699, 2424
AccII	CGCG	1 cut(s)	96
AccIII	TCCGGA	1 cut(s)	1093
AciI	CCGC	5 cut(s)	87, 90, 360, 926, 1896
AclWI	GGATC	5 cut(s)	167, 288, 644, 1079, 1492
AcsI	RAATTY	4 cut(s)	178, 1244, 1544, 2083
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	8 cut(s)	11, 539, 802, 964, 1068, 1308, 1360, 2242
AfiI	CCNNNNNNNGG	5 cut(s)	30, 144, 221, 359, 820
AgeI	ACCGGT	1 cut(s)	43
AhlI	ACTAGT	1 cut(s)	1693
AjiI	CACGTC	1 cut(s)	599
AjnI	CCWGG	3 cut(s)	1913, 2044, 2367
AleI	CACNNNNGTG	1 cut(s)	867
Alw21I	GWGCWC	1 cut(s)	1054
Alw26I	GTCTC	3 cut(s)	130, 198, 526
AlwI	GGATC	5 cut(s)	167, 288, 644, 1079, 1492
AlwNI	CAGNNNCTG	2 cut(s)	809, 1064
Ama87I	CYCGRG	2 cut(s)	5, 367
Aor13HI	TCCGGA	1 cut(s)	1093
AoxI	GGCC	1 cut(s)	1513
ApeKI	GCWGC	8 cut(s)	18, 506, 509, 887, 890, 1802, 1855, 1898
ApoI	RAATTY	4 cut(s)	178, 1244, 1544, 2083
ArsI	GACNNNNNNTTYG	2 cut(s)	858, 890
AsiGI	ACCGGT	1 cut(s)	43
Asp700I	GAANNNNTTC	1 cut(s)	736
AspA2I	CCTAGG	1 cut(s)	584
AspLEI	GCGC	2 cut(s)	137, 1282
AspS9I	GGNCC	2 cut(s)	1514, 2053
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	7 cut(s)	33, 881, 1220, 1745, 2070, 2339, 2383
AsuII	TTCGAA	1 cut(s)	2307
AsuNHI	GCTAGC	1 cut(s)	1798
AvaI	CYCGRG	2 cut(s)	5, 367
AvaII	GGWCC	1 cut(s)	2053
AvrII	CCTAGG	1 cut(s)	584
AxyI	CCTNAGG	1 cut(s)	1749
BaeI	ACNNNNGTAYC	2 cut(s)	388, 421
BanI	GGYRCC	1 cut(s)	134
BanII	GRGCYC	2 cut(s)	1054, 1177
BarI	GAAGNNNNNNTAC	2 cut(s)	1651, 1683
BauI	CACGAG	1 cut(s)	685
Bbv12I	GWGCWC	1 cut(s)	1054
BbvI	GCAGC	8 cut(s)	30, 496, 518, 899, 902, 1789, 1867, 1885
BceAI	ACGGC	2 cut(s)	122, 2194
BciT130I	CCWGG	3 cut(s)	1915, 2046, 2369
BciVI	GTATCC	1 cut(s)	389
BcnI	CCSGG	1 cut(s)	132
BcoDI	GTCTC	3 cut(s)	130, 198, 526
BcuI	ACTAGT	1 cut(s)	1693
BfmI	CTRYAG	2 cut(s)	219, 571
BfoI	RGCGCY	1 cut(s)	138
BfuI	GTATCC	1 cut(s)	389
BglII	AGATCT	1 cut(s)	744
BlnI	CCTAGG	1 cut(s)	584
BmcAI	AGTACT	2 cut(s)	964, 1360
Bme1390I	CCNGG	4 cut(s)	132, 1915, 2046, 2369
Bme18I	GGWCC	1 cut(s)	2053
BmeT110I	CYCGRG	2 cut(s)	5, 367
BmgBI	CACGTC	1 cut(s)	599
BmgT120I	GGNCC	2 cut(s)	1514, 2053
BmiI	GGNNCC	5 cut(s)	136, 351, 838, 1516, 1755
BmrFI	CCNGG	4 cut(s)	132, 1915, 2046, 2369
BmrI	ACTGGG	1 cut(s)	1512
BmsI	GCATC	7 cut(s)	264, 616, 659, 1182, 1204, 1435, 1895
BmtI	GCTAGC	1 cut(s)	1802
BmuI	ACTGGG	1 cut(s)	1512
Bpu14I	TTCGAA	1 cut(s)	2307
BpuEI	CTTGAG	4 cut(s)	63, 332, 421, 960
BpuMI	CCSGG	1 cut(s)	132
Bsa29I	ATCGAT	1 cut(s)	258
BsaBI	GATNNNNATC	1 cut(s)	2268
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	8 cut(s)	130, 166, 584, 1559, 1913, 2045, 2056, 2384
BsaWI	WCCGGW	3 cut(s)	43, 1093, 1481
BsaXI	ACNNNNNCTCC	2 cut(s)	1555, 1585
Bsc4I	CCNNNNNNNGG	5 cut(s)	30, 144, 221, 359, 820
Bse118I	RCCGGY	2 cut(s)	43, 1147
Bse1I	ACTGG	6 cut(s)	35, 814, 1347, 1518, 1865, 2420
Bse21I	CCTNAGG	1 cut(s)	1749
Bse3DI	GCAATG	1 cut(s)	578
Bse8I	GATNNNNATC	1 cut(s)	2268
BseAI	TCCGGA	1 cut(s)	1093
BseBI	CCWGG	3 cut(s)	1915, 2046, 2369
BseCI	ATCGAT	1 cut(s)	258
BseDI	CCNNGG	8 cut(s)	130, 166, 584, 1559, 1913, 2045, 2056, 2384
BseGI	GGATG	6 cut(s)	149, 934, 1102, 1909, 2394, 2398
BseJI	GATNNNNATC	1 cut(s)	2268
BseLI	CCNNNNNNNGG	5 cut(s)	30, 144, 221, 359, 820
BseMI	GCAATG	1 cut(s)	578
BseMII	CTCAG	4 cut(s)	732, 1013, 1298, 1797
BseNI	ACTGG	6 cut(s)	35, 814, 1347, 1518, 1865, 2420
BseRI	GAGGAG	5 cut(s)	238, 497, 500, 1736, 1936
BseXI	GCAGC	8 cut(s)	30, 496, 518, 899, 902, 1789, 1867, 1885
BseYI	CCCAGC	2 cut(s)	672, 896
Bsh1236I	CGCG	1 cut(s)	96
BshFI	GGCC	1 cut(s)	1515
BshNI	GGYRCC	1 cut(s)	134
BshTI	ACCGGT	1 cut(s)	43
BshVI	ATCGAT	1 cut(s)	258
BsiHKAI	GWGCWC	1 cut(s)	1054
BsiHKCI	CYCGRG	2 cut(s)	5, 367
BsiSI	CCGG	5 cut(s)	44, 132, 1094, 1148, 1482
BslFI	GGGAC	3 cut(s)	689, 1022, 1835
BslI	CCNNNNNNNGG	5 cut(s)	30, 144, 221, 359, 820
BsmAI	GTCTC	3 cut(s)	130, 198, 526
BsmBI	CGTCTC	2 cut(s)	130, 198
BsmFI	GGGAC	3 cut(s)	689, 1022, 1835
BsnI	GGCC	1 cut(s)	1515
BsoBI	CYCGRG	2 cut(s)	5, 367
Bsp119I	TTCGAA	1 cut(s)	2307
Bsp1286I	GDGCHC	2 cut(s)	1054, 1177
Bsp13I	TCCGGA	1 cut(s)	1093
Bsp19I	CCATGG	3 cut(s)	166, 1559, 2384
Bsp68I	TCGCGA	1 cut(s)	96
BspACI	CCGC	5 cut(s)	87, 90, 360, 926, 1896
BspANI	GGCC	1 cut(s)	1515
BspCNI	CTCAG	4 cut(s)	733, 1012, 1297, 1796
BspDI	ATCGAT	1 cut(s)	258
BspEI	TCCGGA	1 cut(s)	1093
BspFNI	CGCG	1 cut(s)	96
BspHI	TCATGA	2 cut(s)	469, 691
BspLI	GGNNCC	5 cut(s)	136, 351, 838, 1516, 1755
BspOI	GCTAGC	1 cut(s)	1802
BspPI	GGATC	5 cut(s)	167, 288, 644, 1079, 1492
BspT104I	TTCGAA	1 cut(s)	2307
BspT107I	GGYRCC	1 cut(s)	134
BsrBI	CCGCTC	1 cut(s)	92
BsrDI	GCAATG	1 cut(s)	578
BsrFI	RCCGGY	2 cut(s)	43, 1147
BsrI	ACTGG	6 cut(s)	35, 814, 1347, 1518, 1865, 2420
BssAI	RCCGGY	2 cut(s)	43, 1147
BssECI	CCNNGG	8 cut(s)	130, 166, 584, 1559, 1913, 2045, 2056, 2384
BssNAI	GTATAC	1 cut(s)	700
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	685
BssT1I	CCWWGG	5 cut(s)	166, 584, 1559, 2056, 2384
Bst1107I	GTATAC	1 cut(s)	700
Bst2BI	CACGAG	1 cut(s)	685
Bst2UI	CCWGG	3 cut(s)	1915, 2046, 2369
Bst6I	CTCTTC	3 cut(s)	420, 1341, 2154
BstACI	GRCGYC	1 cut(s)	135
BstBI	TTCGAA	1 cut(s)	2307
BstC8I	GCNNGC	2 cut(s)	94, 1800
BstDEI	CTNAG	6 cut(s)	741, 999, 1251, 1284, 1749, 1783
BstDSI	CCRYGG	3 cut(s)	166, 1559, 2384
BstEII	GGTNACC	1 cut(s)	2345
BstENI	CCTNNNNNAGG	1 cut(s)	219
BstF5I	GGATG	6 cut(s)	149, 934, 1102, 1909, 2394, 2398
BstFNI	CGCG	1 cut(s)	96
BstH2I	RGCGCY	1 cut(s)	138
BstHHI	GCGC	2 cut(s)	137, 1282
BstMAI	GTCTC	3 cut(s)	130, 198, 526
BstMWI	GCNNNNNNNGC	1 cut(s)	261
BstNI	CCWGG	3 cut(s)	1915, 2046, 2369
BstPI	GGTNACC	1 cut(s)	2345
BstSCI	CCNGG	4 cut(s)	130, 1913, 2044, 2367
BstSFI	CTRYAG	2 cut(s)	219, 571
BstUI	CGCG	1 cut(s)	96
BstV1I	GCAGC	8 cut(s)	30, 496, 518, 899, 902, 1789, 1867, 1885
BstX2I	RGATCY	4 cut(s)	280, 636, 744, 1084
BstXI	CCANNNNNNTGG	1 cut(s)	1303
BstYI	RGATCY	4 cut(s)	280, 636, 744, 1084
BstZ17I	GTATAC	1 cut(s)	700
Bsu15I	ATCGAT	1 cut(s)	258
Bsu36I	CCTNAGG	1 cut(s)	1749
BsuI	GTATCC	1 cut(s)	389
BsuRI	GGCC	1 cut(s)	1515
BsuTUI	ATCGAT	1 cut(s)	258
BtgI	CCRYGG	3 cut(s)	166, 1559, 2384
BtgZI	GCGATG	1 cut(s)	1115
BtrI	CACGTC	1 cut(s)	599
BtsCI	GGATG	6 cut(s)	149, 934, 1102, 1909, 2394, 2398
BtsI	GCAGTG	3 cut(s)	658, 1396, 1471
BtsIMutI	CAGTG	7 cut(s)	148, 598, 658, 1396, 1471, 1799, 1858
BtuMI	TCGCGA	1 cut(s)	96
Cac8I	GCNNGC	2 cut(s)	94, 1800
CaiI	CAGNNNCTG	2 cut(s)	809, 1064
CciI	TCATGA	2 cut(s)	469, 691
CfoI	GCGC	2 cut(s)	137, 1282
Cfr10I	RCCGGY	2 cut(s)	43, 1147
Cfr13I	GGNCC	2 cut(s)	1514, 2053
ClaI	ATCGAT	1 cut(s)	258
CseI	GACGC	1 cut(s)	686
Csp6I	GTAC	8 cut(s)	10, 538, 801, 963, 1067, 1307, 1359, 2241
CspAI	ACCGGT	1 cut(s)	43
CviQI	GTAC	8 cut(s)	10, 538, 801, 963, 1067, 1307, 1359, 2241
DdeI	CTNAG	6 cut(s)	741, 999, 1251, 1284, 1749, 1783
DinI	GGCGCC	1 cut(s)	136
DrdI	GACNNNNNNGTC	1 cut(s)	80
DseDI	GACNNNNNNGTC	1 cut(s)	80
Eam1104I	CTCTTC	3 cut(s)	420, 1341, 2154
EarI	CTCTTC	3 cut(s)	420, 1341, 2154
Ecl136II	GAGCTC	1 cut(s)	1052
Eco130I	CCWWGG	5 cut(s)	166, 584, 1559, 2056, 2384
Eco24I	GRGCYC	2 cut(s)	1054, 1177
Eco47I	GGWCC	1 cut(s)	2053
Eco53kI	GAGCTC	1 cut(s)	1052
Eco81I	CCTNAGG	1 cut(s)	1749
Eco88I	CYCGRG	2 cut(s)	5, 367
Eco91I	GGTNACC	1 cut(s)	2345
EcoICRI	GAGCTC	1 cut(s)	1052
EcoNI	CCTNNNNNAGG	1 cut(s)	219
EcoO109I	RGGNCCY	1 cut(s)	2053
EcoO65I	GGTNACC	1 cut(s)	2345
EcoRII	CCWGG	3 cut(s)	1913, 2044, 2367
EcoT14I	CCWWGG	5 cut(s)	166, 584, 1559, 2056, 2384
EcoT22I	ATGCAT	1 cut(s)	1705
EcoT38I	GRGCYC	2 cut(s)	1054, 1177
EgeI	GGCGCC	1 cut(s)	136
EheI	GGCGCC	1 cut(s)	136
ErhI	CCWWGG	5 cut(s)	166, 584, 1559, 2056, 2384
Esp3I	CGTCTC	2 cut(s)	130, 198
FalI	AAGNNNNNCTT	2 cut(s)	2193, 2225
FaqI	GGGAC	3 cut(s)	689, 1022, 1835
FauNDI	CATATG	1 cut(s)	1460
FblI	GTMKAC	2 cut(s)	699, 2424
FokI	GGATG	6 cut(s)	156, 941, 1109, 1896, 2401, 2405
FriOI	GRGCYC	2 cut(s)	1054, 1177
GlaI	GCGC	2 cut(s)	136, 1281
GsaI	CCCAGC	2 cut(s)	676, 900
HaeII	RGCGCY	1 cut(s)	138
HaeIII	GGCC	1 cut(s)	1515
HapII	CCGG	5 cut(s)	44, 132, 1094, 1148, 1482
HgaI	GACGC	1 cut(s)	686
HhaI	GCGC	2 cut(s)	137, 1282
Hin1I	GRCGYC	1 cut(s)	135
Hin6I	GCGC	2 cut(s)	135, 1280
HinP1I	GCGC	2 cut(s)	135, 1280
HincII	GTYRAC	5 cut(s)	28, 155, 564, 1153, 2215
HindII	GTYRAC	5 cut(s)	28, 155, 564, 1153, 2215
HindIII	AAGCTT	1 cut(s)	1220
HpaI	GTTAAC	1 cut(s)	564
HpaII	CCGG	5 cut(s)	44, 132, 1094, 1148, 1482
HphI	GGTGA	7 cut(s)	33, 881, 1220, 1745, 2070, 2339, 2383
Hpy99I	CGWCG	3 cut(s)	74, 143, 2259
HpyAV	CCTTC	9 cut(s)	225, 240, 374, 999, 1569, 1653, 1724, 2195, 2328
HpyCH4IV	ACGT	2 cut(s)	598, 2254
HpyF10VI	GCNNNNNNNGC	1 cut(s)	261
HpyF3I	CTNAG	6 cut(s)	741, 999, 1251, 1284, 1749, 1783
HpySE526I	ACGT	2 cut(s)	598, 2254
Hsp92I	GRCGYC	1 cut(s)	135
HspAI	GCGC	2 cut(s)	135, 1280
KasI	GGCGCC	1 cut(s)	134
Kpn2I	TCCGGA	1 cut(s)	1093
KspAI	GTTAAC	1 cut(s)	564
LmnI	GCTCC	7 cut(s)	26, 71, 355, 648, 1723, 1744, 1753
Lsp1109I	GCAGC	8 cut(s)	30, 496, 518, 899, 902, 1789, 1867, 1885
LweI	GCATC	7 cut(s)	264, 616, 659, 1182, 1204, 1435, 1895
MaeII	ACGT	2 cut(s)	598, 2254
MaeIII	GTNAC	5 cut(s)	610, 756, 1891, 2076, 2345
MbiI	CCGCTC	1 cut(s)	92
MfeI	CAATTG	1 cut(s)	1810
MflI	RGATCY	4 cut(s)	280, 636, 744, 1084
MhlI	GDGCHC	2 cut(s)	1054, 1177
Mly113I	GGCGCC	1 cut(s)	135
MlyI	GAGTC	7 cut(s)	68, 323, 628, 918, 1129, 1869, 2055
MmeI	TCCRAC	3 cut(s)	93, 121, 1766
Mph1103I	ATGCAT	1 cut(s)	1705
MroI	TCCGGA	1 cut(s)	1093
MroXI	GAANNNNTTC	1 cut(s)	736
MseI	TTAA	5 cut(s)	387, 563, 605, 1380, 1434
MslI	CAYNNNNRTG	5 cut(s)	867, 1038, 1182, 1301, 1731
MspA1I	CMGCKG	3 cut(s)	509, 713, 1898
MspI	CCGG	5 cut(s)	44, 132, 1094, 1148, 1482
MspR9I	CCNGG	4 cut(s)	132, 1915, 2046, 2369
MunI	CAATTG	1 cut(s)	1810
MvaI	CCWGG	3 cut(s)	1915, 2046, 2369
MvnI	CGCG	1 cut(s)	96
MwoI	GCNNNNNNNGC	1 cut(s)	261
NarI	GGCGCC	1 cut(s)	135
NciI	CCSGG	1 cut(s)	132
NcoI	CCATGG	3 cut(s)	166, 1559, 2384
NdeI	CATATG	1 cut(s)	1460
NheI	GCTAGC	1 cut(s)	1798
NlaIV	GGNNCC	5 cut(s)	136, 351, 838, 1516, 1755
NmuCI	GTSAC	3 cut(s)	756, 2076, 2345
NruI	TCGCGA	1 cut(s)	96
NsiI	ATGCAT	1 cut(s)	1705
NspV	TTCGAA	1 cut(s)	2307
OliI	CACNNNNGTG	1 cut(s)	867
PaeR7I	CTCGAG	2 cut(s)	5, 367
PagI	TCATGA	2 cut(s)	469, 691
PcsI	WCGNNNNNNNCGW	2 cut(s)	188, 197
PdmI	GAANNNNTTC	1 cut(s)	736
PfeI	GAWTC	7 cut(s)	186, 324, 363, 455, 499, 1394, 1951
PinAI	ACCGGT	1 cut(s)	43
PleI	GAGTC	7 cut(s)	68, 322, 627, 917, 1128, 1869, 2055
PluTI	GGCGCC	1 cut(s)	138
PpsI	GAGTC	7 cut(s)	68, 322, 627, 917, 1128, 1869, 2055
PpuMI	RGGWCCY	1 cut(s)	2053
PsiI	TTATAA	1 cut(s)	948
Psp124BI	GAGCTC	1 cut(s)	1054
Psp5II	RGGWCCY	1 cut(s)	2053
Psp6I	CCWGG	3 cut(s)	1913, 2044, 2367
PspEI	GGTNACC	1 cut(s)	2345
PspFI	CCCAGC	2 cut(s)	672, 896
PspGI	CCWGG	3 cut(s)	1913, 2044, 2367
PspN4I	GGNNCC	5 cut(s)	136, 351, 838, 1516, 1755
PspPI	GGNCC	2 cut(s)	1514, 2053
PspPPI	RGGWCCY	1 cut(s)	2053
PspXI	VCTCGAGB	1 cut(s)	5
PsrI	GAACNNNNNNTAC	2 cut(s)	955, 987
PstNI	CAGNNNCTG	2 cut(s)	809, 1064
PsuI	RGATCY	4 cut(s)	280, 636, 744, 1084
PvuII	CAGCTG	2 cut(s)	509, 713
RruI	TCGCGA	1 cut(s)	96
RsaI	GTAC	8 cut(s)	11, 539, 802, 964, 1068, 1308, 1360, 2242
RsaNI	GTAC	8 cut(s)	10, 538, 801, 963, 1067, 1307, 1359, 2241
RseI	CAYNNNNRTG	5 cut(s)	867, 1038, 1182, 1301, 1731
SacI	GAGCTC	1 cut(s)	1054
SaqAI	TTAA	5 cut(s)	387, 563, 605, 1380, 1434
Sau96I	GGNCC	2 cut(s)	1514, 2053
ScaI	AGTACT	2 cut(s)	964, 1360
SchI	GAGTC	7 cut(s)	68, 323, 628, 918, 1129, 1869, 2055
ScrFI	CCNGG	4 cut(s)	132, 1915, 2046, 2369
SduI	GDGCHC	2 cut(s)	1054, 1177
SfaNI	GCATC	7 cut(s)	264, 616, 659, 1182, 1204, 1435, 1895
SfcI	CTRYAG	2 cut(s)	219, 571
SfoI	GGCGCC	1 cut(s)	136
Sfr274I	CTCGAG	2 cut(s)	5, 367
SfuI	TTCGAA	1 cut(s)	2307
SgrAI	CRCCGGYG	1 cut(s)	43
SinI	GGWCC	1 cut(s)	2053
SlaI	CTCGAG	2 cut(s)	5, 367
SmiMI	CAYNNNNRTG	5 cut(s)	867, 1038, 1182, 1301, 1731
SmlI	CTYRAG	6 cut(s)	5, 78, 311, 367, 400, 975
SmoI	CTYRAG	6 cut(s)	5, 78, 311, 367, 400, 975
SpeI	ACTAGT	1 cut(s)	1693
SsiI	CCGC	5 cut(s)	87, 90, 360, 926, 1896
SspDI	GGCGCC	1 cut(s)	134
SstI	GAGCTC	1 cut(s)	1054
StyD4I	CCNGG	4 cut(s)	130, 1913, 2044, 2367
StyI	CCWWGG	5 cut(s)	166, 584, 1559, 2056, 2384
TaiI	ACGT	2 cut(s)	601, 2257
TatI	WGTACW	3 cut(s)	800, 962, 1358
TauI	GCSGC	2 cut(s)	89, 92
TfiI	GAWTC	7 cut(s)	186, 324, 363, 455, 499, 1394, 1951
Tru1I	TTAA	5 cut(s)	387, 563, 605, 1380, 1434
Tru9I	TTAA	5 cut(s)	387, 563, 605, 1380, 1434
TscAI	CASTG	7 cut(s)	155, 598, 658, 1396, 1471, 1799, 1865
TseFI	GTSAC	3 cut(s)	756, 2076, 2345
TseI	GCWGC	8 cut(s)	18, 506, 509, 887, 890, 1802, 1855, 1898
Tsp45I	GTSAC	3 cut(s)	756, 2076, 2345
TspDTI	ATGAA	8 cut(s)	458, 1557, 1743, 1855, 1898, 2076, 2172, 2307
TspGWI	ACGGA	1 cut(s)	13
TspRI	CASTG	7 cut(s)	155, 598, 658, 1396, 1471, 1799, 1865
VpaK11BI	GGWCC	1 cut(s)	2053
XagI	CCTNNNNNAGG	1 cut(s)	219
XapI	RAATTY	4 cut(s)	178, 1244, 1544, 2083
XhoI	CTCGAG	2 cut(s)	5, 367
XmaJI	CCTAGG	1 cut(s)	584
XmiI	GTMKAC	2 cut(s)	699, 2424
XmnI	GAANNNNTTC	1 cut(s)	736
ZrmI	AGTACT	2 cut(s)	964, 1360
Zsp2I	ATGCAT	1 cut(s)	1705

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.