Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0009337

Physical Location & Seq

Genomic Coordinates Forward (+)

24813559 .. 24819095

Gene Structure 5537 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g32880.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGCTCGAAGTCTATAGAAACAGCTCCGTCGATTGGAAGCCGTCGCCGGTCGTTGCCCTAGCCACCAGCGTCGACGACTCGCAGGTCGCCGCCGCCCGCGCCGACGGCTCCGTCGAGATTTGGCTCGTCTCGCCCGGCGCCGTCGGATGGCACTGTCAGCTGACGATTCATGGAGACCCTAACACGAGTGTTTCGTCGCTCATTTGGTGCCGGGCCGGCTCGAAAGGCTTGCCGTGTGGCCGGCTGTTCTCTTCCAGCCTCGACGGCTCCATTTCGCATTGGGATCTTTTCAATTTGAAGCAGACGACTGTTTTGGAGTCTGTTGGGGTCTCAATCTTTAATATGGCCGTGGCACCTTTTGTTAATGATACAGAAAATGGGTATTTGAACGATAATGGGAGTGATCCTGAAACAAGTGATAGTGATACCAGTGATAGCGAGGATGATTCTGACTCAGACGATGATCATGCACCATCAGTTGTTGTGAACCCCCGTGTAGCATTAGCTGGTGGTGATGGTTTTCTGCAAATTTACAGTATTAACGACGCAGATGAGTTCGTATACACTAAATCACTGCCTAGGGTCAACGGAAGTATTTTAAGTGTTGCGTGGAGTCCCGATGCAAAGTTTATATATGCAGGAAGTACTGATGGCATGATAAGAATCTGGGATGCTAGAGGAGGCATTGAAAAACATAGGATTACAGTTGGACTTGGAGGTTTGGGTGGCGGATCTGAAATCTGTGTGTGGGTGTTACTTTCTCTGAGGTGCGGGACCCTTGTAAGTGCAGACAGTACTGGAAGTGTTCAGTTTTGGGACAGTCAGCATGGAACTCTACTGCAAGCACATTCATATCACAAGGGGGACGTGAAAGCTCTCGCAGCAGCTCCCAGCCATAATCGCGTGTTCTCTGCTGGTTCAGATGGTCAGGTTATTCTTTATAAGCTTTCTAGTGAGACGCTGGAATCTAGTGTAGGGTCTGCTCCTAATGTAATGAAGAAATGGATCTACATTGGTTATACAAGAGCCCATACACATGATGTTAGGGCATTGACAGTGGCTGTACCAATTAGCAGAGAAGATCCCCTACCCGATCAAGGTAGAAAAAGAGCACGTCGTAAGGACAAGCCGGTTGATTTTAGTTATCTTAAATGGGCACATTTGGGTGTTCCTATGCTTATCTCTGCTGGTGATGACACAAAGCTCTTTACCTACCCTGTTAAGGAGTTCACTCAGTTCTCTCCGCATGATATATGCCCTGCGCCTCAGAGAGTATCCATTCAATTGGCGCCTAATACAGAGTTCAGTCAAACATCATTGCTTCTTGTTCAAGGTTCTCATTCATTGGATATCCTGCGCGTACGTGTAAAACCGGGTCCCTTTTTTGATATGGCTCGTGGCCCCTCAGGGGGTCTAGCATCAACAAATGGCCTGTTTCAAATTAAGTCATCACGGAAGATCATTTGCAGCACCATATCTAATTCAGGGGAGTTTTTTGCTTATTCTGACCATGCAAAAATTAGCCTGTTTGAGTTGAAGAAGTGTATTCGATCAGGAAAAAAAGAAGTGAAGTGTAAAGTTGGCGAAAGTGAATTGACACTTAATAAAAGAAACTTACCTCGAAAACTACCGTTTGCCCATTCGATGGTTTTTAGTTTTGATTCTTCTCGCTTGATGATAGCAGGGCATGACAGAAGAATATATGTTGTGGATCTACACAGCTCAGAGCTAGTGCATACCTTTACCCCTTGCCGTGATTTGCATGATCAAGAATTACCACCTACTGAGCCTCCCATAACAAAAATGTTTACGAGTTCTGATGGGCAGTGGTTGGCTGCCATCAACTGCTTTGGCGATGTATATGTCTTTAATCTGGAGATACAGAGGCAGCATTGGTACATTTCAAGACTGGATAATGCCTCGGTGACAGCTGGAGGCTTTTCTCCAAGAAACAATAATGTTCTTATACTCACAACCTCTTCAAATCAGGTATATGCGTTGGATGTTGAGGAGAGAAAATTGGGGGACTGGTCGAGGCAGCATACGTATGTTCTCCCAAAGAGATTCCAAGAATTTCCAGGAGAAGTGATAGGGCTCTCTTTCCCACCTTCACCAAGTACAGCATCTGTTATTGTCTATAGTGCCAGGGCCATGTGCTTGATTGACTTTGGGATGCCTGTTGATCGAGACGATGAAAGTGAGATGATAAATGGTCAGGATCCAGCATTGAGGAATTTGCAAAGTAATGGGAAATTAAAACGCAAGTGGACAGACAGCCAAACTAAGAAACTCTTTGGTAGGAAGAATTTTGAATTTATTCCGTTTGGAGATCCAGTTTTATTCATAGGACATCTTTCCAAAAGTTCCGTGTTGAAAATATACAAACCATGGATGGAAGTGGTTAGGAATTTCGACTCTGCACCTGTAGACAAACATACATTTGGGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0010015 GO:0010051 GO:0010073 GO:0010101 GO:0010102 GO:0010154 GO:0010305 GO:0010311 GO:0010449 GO:0010817 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0032879 GO:0035266 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048527 GO:0048528 GO:0048589 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051049 GO:0061458 GO:0065007 GO:0065008 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

817

Amino Acids

89.94

Weight (kDa)

6.48

Isoelectric Point (pI)

37.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	17 - 232	2.3e-12	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	166 - 320	2.4e-13	WDR5 beta-propeller domain
WDR55	PF24796	166 - 322	7.4e-07	WDR55
Beta-prop_THOC3	PF25174	167 - 318	2.2e-11	THOC3 beta-propeller domain
Beta-prop_TEP1_2nd	PF25047	183 - 317	2.1e-06	TEP-1 second beta-propeller
WD40_CDC20-Fz	PF24807	191 - 351	2.8e-10	CDC20/Fizzy WD40 domain
WD40	PF00400	197 - 224	1.9e-07	WD domain, G-beta repeat
Beta-prop_WDR90_POC16_2nd	PF23393	261 - 322	2.3e-06	WDR90/POC16, second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0009337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27470 AT4G07410 AT4G07410
fragaria_vesca	FvH4_2g32880 FvH4_2g32880 FvH4_2g32880 FvH4_2g32880
malus_domestica	MD08G1080300.v1.1 MD15G1067400.v1.1
prunus_persica	Prupe.1G421300_v2.0.a1
pyrus_communis	pycom08g06630 pycom15g06390
rosa_chinensis	RchiOBHm_Chr6g0309831
rosa_laevigata	RLG00000010532
rosa_multiflora	Rmu_ssc0000373.1_g000003
rosa_roxburghii	Rroxscaffold_7G00159140
rosa_rugosa	Rorug06G0375100
rosa_samantha	Rh6AG488600 Rh6BG498100 Rh6CG502900 Rh6DG489000
rosa_wichuraiana	Rw6G042550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	942
AasI	GACNNNNNNGTC	2 cut(s)	83, 110
Acc36I	ACCTGC	1 cut(s)	73
AccB1I	GGYRCC	4 cut(s)	137, 207, 352, 1288
AccB7I	CCANNNNNTGG	1 cut(s)	1645
AccI	GTMKAC	3 cut(s)	72, 561, 2427
AccII	CGCG	3 cut(s)	99, 903, 1359
AciI	CCGC	6 cut(s)	90, 93, 97, 729, 771, 1244
AclWI	GGATC	9 cut(s)	291, 398, 739, 1013, 1076, 1719, 2213, 2226, 2324
AcoI	YGGCCR	2 cut(s)	238, 345
AcsI	RAATTY	6 cut(s)	528, 2072, 2233, 2305, 2312, 2407
AcyI	GRCGYC	2 cut(s)	138, 1289
AfaI	GTAC	6 cut(s)	646, 796, 1065, 1362, 1898, 2119
AfiI	CCNNNNNNNGG	7 cut(s)	33, 147, 1097, 1222, 1408, 1409, 1645
AflIII	ACRYGT	1 cut(s)	1363
AjiI	CACGTC	2 cut(s)	868, 1115
AjnI	CCWGG	2 cut(s)	2077, 2144
Alw21I	GWGCWC	1 cut(s)	1114
Alw26I	GTCTC	5 cut(s)	133, 168, 334, 950, 2181
AlwI	GGATC	9 cut(s)	291, 398, 739, 1013, 1076, 1719, 2213, 2226, 2324
AlwNI	CAGNNNCTG	2 cut(s)	1061, 2126
AoxI	GGCC	6 cut(s)	213, 238, 345, 1399, 1429, 2148
ApeKI	GCWGC	6 cut(s)	881, 884, 1467, 1835, 1888, 2038
ApoI	RAATTY	6 cut(s)	528, 2072, 2233, 2305, 2312, 2407
ArsI	GACNNNNNNTTYG	2 cut(s)	295, 327
Asp700I	GAANNNNTTC	1 cut(s)	2316
AspA2I	CCTAGG	1 cut(s)	578
AspLEI	GCGC	5 cut(s)	101, 140, 1264, 1291, 1359
AspS9I	GGNCC	5 cut(s)	213, 774, 1376, 1400, 2148
AsuC2I	CCSGG	3 cut(s)	135, 212, 1374
AsuHPI	GGTGA	4 cut(s)	524, 1202, 1936, 2103
AvaII	GGWCC	2 cut(s)	774, 1376
AvrII	CCTAGG	1 cut(s)	578
AxyI	CCTNAGG	1 cut(s)	1405
BaeGI	GKGCMC	1 cut(s)	1159
BamHI	GGATCC	1 cut(s)	2218
BanI	GGYRCC	4 cut(s)	137, 207, 352, 1288
BanII	GRGCYC	2 cut(s)	1030, 2097
BarI	GAAGNNNNNNTAC	2 cut(s)	1071, 1103
BauI	CACGAG	2 cut(s)	184, 1395
Bbv12I	GWGCWC	1 cut(s)	1114
BbvI	GCAGC	6 cut(s)	893, 896, 1479, 1822, 1900, 2050
BccI	CCATC	9 cut(s)	141, 481, 509, 644, 917, 1639, 1814, 1847, 2386
BceAI	ACGGC	7 cut(s)	25, 121, 125, 217, 280, 332, 1737
BcgI	CGANNNNNNTGC	4 cut(s)	211, 245, 449, 483
BciT130I	CCWGG	2 cut(s)	2079, 2146
BciVI	GTATCC	1 cut(s)	1285
BclI	TGATCA	2 cut(s)	463, 1765
BcnI	CCSGG	3 cut(s)	135, 212, 1374
BcoDI	GTCTC	5 cut(s)	133, 168, 334, 950, 2181
BfaI	CTAG	7 cut(s)	59, 579, 675, 951, 969, 1415, 1730
BfmI	CTRYAG	3 cut(s)	13, 2137, 2424
BfoI	RGCGCY	2 cut(s)	141, 1292
BfuAI	ACCTGC	1 cut(s)	73
BfuI	GTATCC	1 cut(s)	1285
BglI	GCCNNNNNGGC	2 cut(s)	216, 264
BisI	GCNGC	8 cut(s)	90, 93, 882, 885, 1468, 1836, 1889, 2039
BlnI	CCTAGG	1 cut(s)	578
BlsI	GCNGC	8 cut(s)	91, 94, 883, 886, 1469, 1837, 1890, 2040
BmcAI	AGTACT	2 cut(s)	646, 796
Bme1390I	CCNGG	5 cut(s)	135, 212, 1374, 2079, 2146
Bme18I	GGWCC	2 cut(s)	774, 1376
BmgBI	CACGTC	2 cut(s)	868, 1115
BmgT120I	GGNCC	5 cut(s)	213, 774, 1376, 1400, 2148
BmrFI	CCNGG	5 cut(s)	135, 212, 1374, 2079, 2146
BmsI	GCATC	5 cut(s)	610, 661, 1427, 2132, 2163
BpmI	CTGGAG	2 cut(s)	1895, 1953
BpuMI	CCSGG	3 cut(s)	135, 212, 1374
BsaAI	YACGTR	2 cut(s)	1364, 2046
BsaBI	GATNNNNATC	1 cut(s)	662
BsaHI	GRCGYC	2 cut(s)	138, 1289
BsaI	GGTCTC	2 cut(s)	168, 334
BsaJI	CCNNGG	5 cut(s)	348, 578, 1920, 2145, 2387
BsaXI	ACNNNNNCTCC	4 cut(s)	1774, 1804, 2319, 2349
Bsc4I	CCNNNNNNNGG	7 cut(s)	33, 147, 1097, 1222, 1408, 1409, 1645
Bse118I	RCCGGY	4 cut(s)	46, 215, 240, 1129
Bse1I	ACTGG	5 cut(s)	429, 802, 1914, 2033, 2333
Bse21I	CCTNAGG	1 cut(s)	1405
Bse3DI	GCAATG	1 cut(s)	1316
Bse8I	GATNNNNATC	1 cut(s)	662
BseBI	CCWGG	2 cut(s)	2079, 2146
BseDI	CCNNGG	5 cut(s)	348, 578, 1920, 2145, 2387
BseGI	GGATG	6 cut(s)	152, 448, 676, 2008, 2178, 2397
BseJI	GATNNNNATC	1 cut(s)	662
BseLI	CCNNNNNNNGG	7 cut(s)	33, 147, 1097, 1222, 1408, 1409, 1645
BseMI	GCAATG	1 cut(s)	1316
BseMII	CTCAG	7 cut(s)	468, 755, 1247, 1280, 1419, 1737, 1776
BseNI	ACTGG	5 cut(s)	429, 802, 1914, 2033, 2333
BseRI	GAGGAG	2 cut(s)	693, 2024
BseSI	GKGCMC	1 cut(s)	1159
BseXI	GCAGC	6 cut(s)	893, 896, 1479, 1822, 1900, 2050
BseYI	CCCAGC	1 cut(s)	890
BsgI	GTGCAG	2 cut(s)	807, 2403
Bsh1236I	CGCG	3 cut(s)	99, 903, 1359
Bsh1285I	CGRYCG	1 cut(s)	51
BshFI	GGCC	6 cut(s)	215, 240, 347, 1401, 1431, 2150
BshNI	GGYRCC	4 cut(s)	137, 207, 352, 1288
BsiEI	CGRYCG	1 cut(s)	51
BsiHKAI	GWGCWC	1 cut(s)	1114
BsiSI	CCGG	7 cut(s)	47, 135, 211, 216, 241, 1130, 1373
BsiWI	CGTACG	1 cut(s)	1360
BslFI	GGGAC	6 cut(s)	600, 787, 830, 878, 1362, 2039
BslI	CCNNNNNNNGG	7 cut(s)	33, 147, 1097, 1222, 1408, 1409, 1645
BsmAI	GTCTC	5 cut(s)	133, 168, 334, 950, 2181
BsmBI	CGTCTC	3 cut(s)	133, 950, 2181
BsmFI	GGGAC	6 cut(s)	600, 787, 830, 878, 1362, 2039
BsnI	GGCC	6 cut(s)	215, 240, 347, 1401, 1431, 2150
Bso31I	GGTCTC	2 cut(s)	168, 334
Bsp1286I	GDGCHC	4 cut(s)	1030, 1114, 1159, 2097
Bsp19I	CCATGG	1 cut(s)	2387
BspACI	CCGC	6 cut(s)	90, 93, 97, 729, 771, 1244
BspANI	GGCC	6 cut(s)	215, 240, 347, 1401, 1431, 2150
BspCNI	CTCAG	7 cut(s)	467, 756, 1246, 1279, 1418, 1736, 1777
BspFNI	CGCG	3 cut(s)	99, 903, 1359
BspMI	ACCTGC	1 cut(s)	73
BspPI	GGATC	9 cut(s)	291, 398, 739, 1013, 1076, 1719, 2213, 2226, 2324
BspT107I	GGYRCC	4 cut(s)	137, 207, 352, 1288
BspTNI	GGTCTC	2 cut(s)	168, 334
BsrDI	GCAATG	1 cut(s)	1316
BsrFI	RCCGGY	4 cut(s)	46, 215, 240, 1129
BsrI	ACTGG	5 cut(s)	429, 802, 1914, 2033, 2333
BssAI	RCCGGY	4 cut(s)	46, 215, 240, 1129
BssECI	CCNNGG	5 cut(s)	348, 578, 1920, 2145, 2387
BssNAI	GTATAC	1 cut(s)	562
BssNI	GRCGYC	2 cut(s)	138, 1289
BssSI	CACGAG	2 cut(s)	184, 1395
BssT1I	CCWWGG	2 cut(s)	578, 2387
Bst1107I	GTATAC	1 cut(s)	562
Bst2BI	CACGAG	2 cut(s)	184, 1395
Bst2UI	CCWGG	2 cut(s)	2079, 2146
Bst4CI	ACNGT	8 cut(s)	155, 310, 536, 706, 794, 821, 1057, 1632
Bst6I	CTCTTC	2 cut(s)	256, 1984
BstACI	GRCGYC	2 cut(s)	138, 1289
BstBAI	YACGTR	2 cut(s)	1364, 2046
BstC8I	GCNNGC	5 cut(s)	97, 217, 230, 242, 843
BstDEI	CTNAG	8 cut(s)	454, 764, 1233, 1266, 1405, 1723, 1785, 2283
BstDSI	CCRYGG	2 cut(s)	348, 2387
BstF5I	GGATG	6 cut(s)	152, 448, 676, 2008, 2178, 2397
BstFNI	CGCG	3 cut(s)	99, 903, 1359
BstH2I	RGCGCY	2 cut(s)	141, 1292
BstHHI	GCGC	5 cut(s)	101, 140, 1264, 1291, 1359
BstMAI	GTCTC	5 cut(s)	133, 168, 334, 950, 2181
BstMCI	CGRYCG	1 cut(s)	51
BstMWI	GCNNNNNNNGC	9 cut(s)	98, 105, 130, 157, 216, 225, 264, 881, 900
BstNI	CCWGG	2 cut(s)	2079, 2146
BstSCI	CCNGG	5 cut(s)	133, 210, 1372, 2077, 2144
BstSFI	CTRYAG	3 cut(s)	13, 2137, 2424
BstSLI	GKGCMC	1 cut(s)	1159
BstSNI	TACGTA	1 cut(s)	2046
BstUI	CGCG	3 cut(s)	99, 903, 1359
BstV1I	GCAGC	6 cut(s)	893, 896, 1479, 1822, 1900, 2050
BstX2I	RGATCY	7 cut(s)	283, 731, 1005, 1081, 1711, 2218, 2329
BstXI	CCANNNNNNTGG	1 cut(s)	1285
BstYI	RGATCY	7 cut(s)	283, 731, 1005, 1081, 1711, 2218, 2329
BstZ17I	GTATAC	1 cut(s)	562
Bsu36I	CCTNAGG	1 cut(s)	1405
BsuI	GTATCC	1 cut(s)	1285
BsuRI	GGCC	6 cut(s)	215, 240, 347, 1401, 1431, 2150
BtgI	CCRYGG	2 cut(s)	348, 2387
BtgZI	GCGATG	1 cut(s)	1869
BtrI	CACGTC	2 cut(s)	868, 1115
BtsCI	GGATG	6 cut(s)	152, 448, 676, 2008, 2178, 2397
BtsI	GCAGTG	2 cut(s)	572, 1832
BtsIMutI	CAGTG	5 cut(s)	151, 436, 572, 1062, 1832
BveI	ACCTGC	1 cut(s)	73
Cac8I	GCNNGC	5 cut(s)	97, 217, 230, 242, 843
CaiI	CAGNNNCTG	2 cut(s)	1061, 2126
CfoI	GCGC	5 cut(s)	101, 140, 1264, 1291, 1359
Cfr10I	RCCGGY	4 cut(s)	46, 215, 240, 1129
Cfr13I	GGNCC	5 cut(s)	213, 774, 1376, 1400, 2148
CseI	GACGC	3 cut(s)	58, 554, 967
Csp6I	GTAC	6 cut(s)	645, 795, 1064, 1361, 1897, 2118
CviQI	GTAC	6 cut(s)	645, 795, 1064, 1361, 1897, 2118
DdeI	CTNAG	8 cut(s)	454, 764, 1233, 1266, 1405, 1723, 1785, 2283
DinI	GGCGCC	2 cut(s)	139, 1290
DrdI	GACNNNNNNGTC	2 cut(s)	83, 110
DseDI	GACNNNNNNGTC	2 cut(s)	83, 110
EaeI	YGGCCR	2 cut(s)	238, 345
Eam1104I	CTCTTC	2 cut(s)	256, 1984
EarI	CTCTTC	2 cut(s)	256, 1984
EciI	GGCGGA	1 cut(s)	744
Eco105I	TACGTA	1 cut(s)	2046
Eco130I	CCWWGG	2 cut(s)	578, 2387
Eco24I	GRGCYC	2 cut(s)	1030, 2097
Eco31I	GGTCTC	2 cut(s)	168, 334
Eco32I	GATATC	1 cut(s)	1351
Eco47I	GGWCC	2 cut(s)	774, 1376
Eco81I	CCTNAGG	1 cut(s)	1405
EcoO109I	RGGNCCY	2 cut(s)	774, 1376
EcoRII	CCWGG	2 cut(s)	2077, 2144
EcoRV	GATATC	1 cut(s)	1351
EcoT14I	CCWWGG	2 cut(s)	578, 2387
EcoT38I	GRGCYC	2 cut(s)	1030, 2097
EgeI	GGCGCC	2 cut(s)	139, 1290
EheI	GGCGCC	2 cut(s)	139, 1290
ErhI	CCWWGG	2 cut(s)	578, 2387
Esp3I	CGTCTC	3 cut(s)	133, 950, 2181
FalI	AAGNNNNNCTT	2 cut(s)	2276, 2308
FaqI	GGGAC	6 cut(s)	600, 787, 830, 878, 1362, 2039
FauI	CCCGC	2 cut(s)	104, 764
FbaI	TGATCA	2 cut(s)	463, 1765
FblI	GTMKAC	3 cut(s)	72, 561, 2427
Fnu4HI	GCNGC	8 cut(s)	90, 93, 882, 885, 1468, 1836, 1889, 2039
FokI	GGATG	6 cut(s)	159, 455, 683, 2015, 2185, 2404
FriOI	GRGCYC	2 cut(s)	1030, 2097
Fsp4HI	GCNGC	8 cut(s)	90, 93, 882, 885, 1468, 1836, 1889, 2039
FspBI	CTAG	7 cut(s)	59, 579, 675, 951, 969, 1415, 1730
GlaI	GCGC	5 cut(s)	100, 139, 1263, 1290, 1358
GluI	GCNGC	8 cut(s)	90, 93, 882, 885, 1468, 1836, 1889, 2039
GsaI	CCCAGC	1 cut(s)	894
GsuI	CTGGAG	2 cut(s)	1895, 1953
HaeII	RGCGCY	2 cut(s)	141, 1292
HaeIII	GGCC	6 cut(s)	215, 240, 347, 1401, 1431, 2150
HapII	CCGG	7 cut(s)	47, 135, 211, 216, 241, 1130, 1373
HgaI	GACGC	3 cut(s)	58, 554, 967
HhaI	GCGC	5 cut(s)	101, 140, 1264, 1291, 1359
Hin1I	GRCGYC	2 cut(s)	138, 1289
Hin6I	GCGC	5 cut(s)	99, 138, 1262, 1289, 1357
HinP1I	GCGC	5 cut(s)	99, 138, 1262, 1289, 1357
HincII	GTYRAC	2 cut(s)	73, 586
HindII	GTYRAC	2 cut(s)	73, 586
HindIII	AAGCTT	1 cut(s)	944
HpaII	CCGG	7 cut(s)	47, 135, 211, 216, 241, 1130, 1373
HphI	GGTGA	4 cut(s)	524, 1202, 1936, 2103
Hpy166II	GTNNAC	8 cut(s)	73, 487, 562, 586, 1230, 1809, 2268, 2428
Hpy188III	TCNNGA	9 cut(s)	115, 407, 617, 1554, 1769, 1874, 1905, 2186, 2216
Hpy8I	GTNNAC	8 cut(s)	73, 487, 562, 586, 1230, 1809, 2268, 2428
HpyAV	CCTTC	1 cut(s)	2118
HpyCH4III	ACNGT	8 cut(s)	155, 310, 536, 706, 794, 821, 1057, 1632
HpyCH4IV	ACGT	4 cut(s)	867, 1114, 1363, 2045
HpyF10VI	GCNNNNNNNGC	9 cut(s)	98, 105, 130, 157, 216, 225, 264, 881, 900
HpyF3I	CTNAG	8 cut(s)	454, 764, 1233, 1266, 1405, 1723, 1785, 2283
HpySE526I	ACGT	4 cut(s)	867, 1114, 1363, 2045
Hsp92I	GRCGYC	2 cut(s)	138, 1289
HspAI	GCGC	5 cut(s)	99, 138, 1262, 1289, 1357
KasI	GGCGCC	2 cut(s)	137, 1288
KflI	GGGWCCC	2 cut(s)	774, 1376
KroI	GCCGGC	2 cut(s)	215, 240
KroNI	GCCGGC	2 cut(s)	217, 242
Ksp22I	TGATCA	2 cut(s)	463, 1765
LmnI	GCTCC	5 cut(s)	29, 113, 272, 892, 988
Lsp1109I	GCAGC	6 cut(s)	893, 896, 1479, 1822, 1900, 2050
LweI	GCATC	5 cut(s)	610, 661, 1427, 2132, 2163
MaeI	CTAG	7 cut(s)	59, 579, 675, 951, 969, 1415, 1730
MaeII	ACGT	4 cut(s)	867, 1114, 1363, 2045
MaeIII	GTNAC	2 cut(s)	753, 1924
MboII	GAAGA	9 cut(s)	243, 1009, 1091, 1468, 1549, 1656, 1707, 1971, 2314
MfeI	CAATTG	1 cut(s)	1283
MflI	RGATCY	7 cut(s)	283, 731, 1005, 1081, 1711, 2218, 2329
MhlI	GDGCHC	4 cut(s)	1030, 1114, 1159, 2097
Mly113I	GGCGCC	2 cut(s)	138, 1289
MlyI	GAGTC	5 cut(s)	71, 326, 446, 622, 2408
MmeI	TCCRAC	3 cut(s)	124, 688, 1980
MroNI	GCCGGC	2 cut(s)	215, 240
MroXI	GAANNNNTTC	1 cut(s)	2316
MslI	CAYNNNNRTG	3 cut(s)	1035, 1164, 2046
MspA1I	CMGCKG	2 cut(s)	160, 1931
MspI	CCGG	7 cut(s)	47, 135, 211, 216, 241, 1130, 1373
MspR9I	CCNGG	5 cut(s)	135, 212, 1374, 2079, 2146
MunI	CAATTG	1 cut(s)	1283
MvaI	CCWGG	2 cut(s)	2079, 2146
MvnI	CGCG	3 cut(s)	99, 903, 1359
MwoI	GCNNNNNNNGC	9 cut(s)	98, 105, 130, 157, 216, 225, 264, 881, 900
NaeI	GCCGGC	2 cut(s)	217, 242
NarI	GGCGCC	2 cut(s)	138, 1289
NciI	CCSGG	3 cut(s)	135, 212, 1374
NcoI	CCATGG	1 cut(s)	2387
NgoMIV	GCCGGC	2 cut(s)	215, 240
NmuCI	GTSAC	1 cut(s)	1924
PcsI	WCGNNNNNNNCGW	2 cut(s)	111, 191
PdiI	GCCGGC	2 cut(s)	217, 242
PdmI	GAANNNNTTC	1 cut(s)	2316
PfeI	GAWTC	6 cut(s)	166, 446, 663, 965, 1661, 2064
Pfl23II	CGTACG	1 cut(s)	1360
PflMI	CCANNNNNTGG	1 cut(s)	1645
PfoI	TCCNGGA	1 cut(s)	2077
PkrI	GCNGC	8 cut(s)	91, 94, 883, 886, 1469, 1837, 1890, 2040
PleI	GAGTC	5 cut(s)	71, 325, 446, 621, 2408
PluTI	GGCGCC	2 cut(s)	141, 1292
PpsI	GAGTC	5 cut(s)	71, 325, 446, 621, 2408
Ppu21I	YACGTR	2 cut(s)	1364, 2046
PpuMI	RGGWCCY	2 cut(s)	774, 1376
PsiI	TTATAA	1 cut(s)	942
Psp5II	RGGWCCY	2 cut(s)	774, 1376
Psp6I	CCWGG	2 cut(s)	2077, 2144
PspFI	CCCAGC	1 cut(s)	890
PspGI	CCWGG	2 cut(s)	2077, 2144
PspLI	CGTACG	1 cut(s)	1360
PspPI	GGNCC	5 cut(s)	213, 774, 1376, 1400, 2148
PspPPI	RGGWCCY	2 cut(s)	774, 1376
PstNI	CAGNNNCTG	2 cut(s)	1061, 2126
PsuI	RGATCY	7 cut(s)	283, 731, 1005, 1081, 1711, 2218, 2329
PvuII	CAGCTG	2 cut(s)	160, 1931
RsaI	GTAC	6 cut(s)	646, 796, 1065, 1362, 1898, 2119
RsaNI	GTAC	6 cut(s)	645, 795, 1064, 1361, 1897, 2118
RseI	CAYNNNNRTG	3 cut(s)	1035, 1164, 2046
SalI	GTCGAC	1 cut(s)	71
SatI	GCNGC	8 cut(s)	90, 93, 882, 885, 1468, 1836, 1889, 2039
Sau96I	GGNCC	5 cut(s)	213, 774, 1376, 1400, 2148
ScaI	AGTACT	2 cut(s)	646, 796
SchI	GAGTC	5 cut(s)	71, 326, 446, 622, 2408
ScrFI	CCNGG	5 cut(s)	135, 212, 1374, 2079, 2146
SduI	GDGCHC	4 cut(s)	1030, 1114, 1159, 2097
SfaNI	GCATC	5 cut(s)	610, 661, 1427, 2132, 2163
SfcI	CTRYAG	3 cut(s)	13, 2137, 2424
SfoI	GGCGCC	2 cut(s)	139, 1290
SgrDI	CGTCGACG	1 cut(s)	71
SinI	GGWCC	2 cut(s)	774, 1376
SmiMI	CAYNNNNRTG	3 cut(s)	1035, 1164, 2046
SnaBI	TACGTA	1 cut(s)	2046
SsiI	CCGC	6 cut(s)	90, 93, 97, 729, 771, 1244
SspDI	GGCGCC	2 cut(s)	137, 1288
SspMI	CTAG	7 cut(s)	59, 579, 675, 951, 969, 1415, 1730
StyD4I	CCNGG	5 cut(s)	133, 210, 1372, 2077, 2144
StyI	CCWWGG	2 cut(s)	578, 2387
TaaI	ACNGT	8 cut(s)	155, 310, 536, 706, 794, 821, 1057, 1632
TaiI	ACGT	4 cut(s)	870, 1117, 1366, 2048
TatI	WGTACW	3 cut(s)	644, 794, 2117
TauI	GCSGC	2 cut(s)	92, 95
TfiI	GAWTC	6 cut(s)	166, 446, 663, 965, 1661, 2064
TscAI	CASTG	5 cut(s)	158, 436, 579, 1062, 1832
TseFI	GTSAC	1 cut(s)	1924
TseI	GCWGC	6 cut(s)	881, 884, 1467, 1835, 1888, 2038
Tsp45I	GTSAC	1 cut(s)	1924
TspDTI	ATGAA	6 cut(s)	158, 840, 1010, 1332, 2208, 2332
TspGWI	ACGGA	6 cut(s)	16, 100, 603, 1468, 2310, 2356
TspRI	CASTG	5 cut(s)	158, 436, 579, 1062, 1832
Van91I	CCANNNNNTGG	1 cut(s)	1645
VpaK11BI	GGWCC	2 cut(s)	774, 1376
XapI	RAATTY	6 cut(s)	528, 2072, 2233, 2305, 2312, 2407
XmaJI	CCTAGG	1 cut(s)	578
XmiI	GTMKAC	3 cut(s)	72, 561, 2427
XmnI	GAANNNNTTC	1 cut(s)	2316
XspI	CTAG	7 cut(s)	59, 579, 675, 951, 969, 1415, 1730
ZrmI	AGTACT	2 cut(s)	646, 796

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.