AT1G29890

O-acetyltransferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10463029 .. 10467452
4424 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G29890.2

Sequence Viewer

Length: 1413 bp
ATGTTCTCTAGCCATAATATTTTCTTAACCATTGGCATTGTGTTTATTCGTAGGTTTCTGACTTTGGAAGACTCTTTCTTGCTTGAAAACCGAGCAACCTTGAGAGCAATGGCTGAGTTTGGAGCAATTCTTTTATATTTTTATATTTGTGATCGAACTAGCTTGATCGGGCAGTCTCAAAAGAATTACAGCCGAGACCTTTTTCTCTTTCTCTTCTGTCTTCTCATCATAGTGTCAGCTATGACGTCCTTGAAGAAACACACTGACAAGTCACCAATAACAGGAAAGTCCATTCTGTATCTCAATCGTCACCAGACTGAAGAATGGAAAGGGTGGATGCAGGTTCTATTTCTGATGTATCATTATTTTGCGGCAGTTGAGTTTTACAATGCAATCAGGGTCTTCATCGCTGGCTATGTGTGGATGACCGGTTTTGGGAACTTCTCTTATTACTATATCCGAAAGGATTTCTCCCTTGCACGATTCACTCAGATGATGTGGCGGCTTAACTTTTTTGTGGCGTTTTGTTGCATTATTCTCAACAATGACTATATGCTGTACTACATCTGTCCAATGCACACTCTATTCACGCTGATGGTCTATGGAGCCCTTGGTATTTACAGTCAGTATAACGAAATAGCATCAGTGATGGCTCTGAAGATTGCTTCATGCTTTCTCGTGGTTATCCTTATGTGGGAGATTCCTGGAGTTTTTGAGATTTTCTGGAGTCCTCTGGCATTCTTACTGGGGTACACAGATCCAGCTAAACCAGACCTTCCACGTCTACACGAATGGCATTTCAGATCTGGACTTGATCGCTACATATGGATCATCGGCATGATATATGCATATTTTCATCCCACTGTAGAAAGATGGATGGAGAAATTGGAGGAGTGTGATGCTAAGAGAAGGATGTCAATCAAGACAAGCATAATAGGAATTTCTTCATTCGCTGGTTACCTTTGGTATGAATACATCTACAAGCTGGACAAGGTTACGTACAACAAATATCATCCCTACACATCTTGGATTCCAATAACTGTCTACATCTGTCTGCGAAATTGCACCCAACAGCTACGGAGATTTTCCCTGACACTCTTTGCGTGGCTGGGCAAGATAACTCTCGAGACCTACATTTCACAGTTTCACATCTGGTTAAGATCGAGTGTGCCAAATGGGCAGCCAAAGTTGCTATTATCAATCATCCCAGAATACCCAATGCTCAACTTCATGCTCACCACGGCCATCTACGTCTTGGTATCTGTTCGACTTTTCGAGCTAACCAATACATTAAAATCAGTTTTCATACCCACGAAAGACGACAAACGGCTGCTCCACAACGTGATTGCTATGGCTGCGATATCATTTTGTTTATATATTATCGGTCTTATTCTTCTCTTGATCCCACATTAA

Protein Analysis

470

Amino Acids

55.55

Weight (kDa)

9.07

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cas1_AcylT PF07779 107 - 240 1.6e-33 10 TM Acyl Transferase domain found in Cas1p
Cas1_AcylT PF07779 276 - 560 4.3e-51 10 TM Acyl Transferase domain found in Cas1p
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 248
Acc36I ACCTGC 1 cut(s) 331
AccI GTMKAC 2 cut(s) 784, 1044
AciI CCGC 2 cut(s) 371, 502
AclWI GGATC 3 cut(s) 752, 836, 1396
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 1 cut(s) 939
AcuI CTGAAG 2 cut(s) 339, 677
AcyI GRCGYC 1 cut(s) 245
AdeI CACNNNGTG 1 cut(s) 1342
AfaI GTAC 3 cut(s) 560, 752, 1001
AfiI CCNNNNNNNGG 3 cut(s) 281, 435, 694
AgeI ACCGGT 1 cut(s) 428
AgsI TTSAA 2 cut(s) 86, 253
AjiI CACGTC 1 cut(s) 782
AjnI CCWGG 1 cut(s) 703
AluBI AGCT 6 cut(s) 162, 239, 764, 985, 1075, 1279
AluI AGCT 6 cut(s) 162, 239, 764, 985, 1075, 1279
Alw26I GTCTC 3 cut(s) 180, 189, 1121
AlwI GGATC 3 cut(s) 752, 836, 1396
Ama87I CYCGRG 1 cut(s) 1124
AoxI GGCC 1 cut(s) 1242
ApeKI GCWGC 3 cut(s) 1180, 1330, 1355
ApoI RAATTY 1 cut(s) 939
AsiGI ACCGGT 1 cut(s) 428
Asp700I GAANNNNTTC 1 cut(s) 943
AsuHPI GGTGA 3 cut(s) 264, 302, 1228
AvaI CYCGRG 1 cut(s) 1124
BanII GRGCYC 1 cut(s) 610
BauI CACGAG 1 cut(s) 677
BbsI GAAGAC 3 cut(s) 75, 212, 394
BbvI GCAGC 3 cut(s) 1192, 1317, 1342
BccI CCATC 5 cut(s) 589, 643, 867, 871, 1253
BceAI ACGGC 2 cut(s) 1257, 1343
BciT130I CCWGG 1 cut(s) 705
BcoDI GTCTC 3 cut(s) 180, 189, 1121
BfaI CTAG 2 cut(s) 9, 159
BfmI CTRYAG 1 cut(s) 864
BfuAI ACCTGC 1 cut(s) 331
BglI GCCNNNNNGGC 1 cut(s) 1177
BglII AGATCT 1 cut(s) 803
BisI GCNGC 5 cut(s) 372, 503, 1181, 1331, 1356
BlsI GCNGC 5 cut(s) 373, 504, 1182, 1332, 1357
Bme1390I CCNGG 1 cut(s) 705
BmeT110I CYCGRG 1 cut(s) 1124
BmgBI CACGTC 1 cut(s) 782
BmiI GGNNCC 1 cut(s) 607
BmrFI CCNGG 1 cut(s) 705
BmrI ACTGGG 1 cut(s) 755
BmsI GCATC 3 cut(s) 327, 650, 889
BmuI ACTGGG 1 cut(s) 755
BpiI GAAGAC 3 cut(s) 75, 212, 394
BpmI CTGGAG 2 cut(s) 726, 745
BpuEI CTTGAG 1 cut(s) 121
BsaAI YACGTR 1 cut(s) 999
BsaBI GATNNNNATC 1 cut(s) 917
BsaHI GRCGYC 1 cut(s) 245
BsaI GGTCTC 2 cut(s) 189, 1121
BsaJI CCNNGG 2 cut(s) 610, 1239
BsaWI WCCGGW 1 cut(s) 428
BsaXI ACNNNNNCTCC 2 cut(s) 1317, 1347
Bsc4I CCNNNNNNNGG 3 cut(s) 281, 435, 694
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 1 cut(s) 750
Bse3DI GCAATG 1 cut(s) 114
Bse8I GATNNNNATC 1 cut(s) 917
BseBI CCWGG 1 cut(s) 705
BseDI CCNNGG 2 cut(s) 610, 1239
BseGI GGATG 7 cut(s) 342, 429, 856, 882, 918, 1012, 1203
BseJI GATNNNNATC 1 cut(s) 917
BseLI CCNNNNNNNGG 3 cut(s) 281, 435, 694
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 2 cut(s) 105, 503
BseNI ACTGG 1 cut(s) 750
BseRI GAGGAG 1 cut(s) 905
BseXI GCAGC 3 cut(s) 1192, 1317, 1342
BseYI CCCAGC 1 cut(s) 1108
BshFI GGCC 1 cut(s) 1244
BshTI ACCGGT 1 cut(s) 428
BsiHKCI CYCGRG 1 cut(s) 1124
BsiSI CCGG 1 cut(s) 429
BslI CCNNNNNNNGG 3 cut(s) 281, 435, 694
BsmAI GTCTC 3 cut(s) 180, 189, 1121
BsmI GAATGC 1 cut(s) 737
BsnI GGCC 1 cut(s) 1244
Bso31I GGTCTC 2 cut(s) 189, 1121
BsoBI CYCGRG 1 cut(s) 1124
Bsp1286I GDGCHC 1 cut(s) 610
Bsp143I GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
BspACI CCGC 2 cut(s) 371, 502
BspANI GGCC 1 cut(s) 1244
BspCNI CTCAG 2 cut(s) 106, 502
BspLI GGNNCC 1 cut(s) 607
BspMI ACCTGC 1 cut(s) 331
BspPI GGATC 3 cut(s) 752, 836, 1396
BspTNI GGTCTC 2 cut(s) 189, 1121
BsrDI GCAATG 1 cut(s) 114
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 1 cut(s) 750
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 2 cut(s) 610, 1239
BssMI GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
BssNI GRCGYC 1 cut(s) 245
BssSI CACGAG 1 cut(s) 677
BssT1I CCWWGG 1 cut(s) 610
Bst2BI CACGAG 1 cut(s) 677
Bst2UI CCWGG 1 cut(s) 705
Bst4CI ACNGT 4 cut(s) 623, 865, 1042, 1143
Bst6I CTCTTC 1 cut(s) 218
BstACI GRCGYC 1 cut(s) 245
BstBAI YACGTR 1 cut(s) 999
BstC8I GCNNGC 1 cut(s) 412
BstDEI CTNAG 3 cut(s) 114, 489, 903
BstDSI CCRYGG 1 cut(s) 1239
BstEII GGTNACC 1 cut(s) 956
BstF5I GGATG 7 cut(s) 342, 429, 856, 882, 918, 1012, 1203
BstKTI GATC 8 cut(s) 154, 168, 760, 806, 817, 831, 1163, 1404
BstMAI GTCTC 3 cut(s) 180, 189, 1121
BstMBI GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
BstMWI GCNNNNNNNGC 3 cut(s) 1177, 1189, 1355
BstNI CCWGG 1 cut(s) 705
BstPI GGTNACC 1 cut(s) 956
BstSCI CCNGG 1 cut(s) 703
BstSFI CTRYAG 1 cut(s) 864
BstSNI TACGTA 1 cut(s) 999
BstV1I GCAGC 3 cut(s) 1192, 1317, 1342
BstV2I GAAGAC 3 cut(s) 75, 212, 394
BstX2I RGATCY 2 cut(s) 757, 803
BstYI RGATCY 2 cut(s) 757, 803
BsuRI GGCC 1 cut(s) 1244
BtgI CCRYGG 1 cut(s) 1239
BtgZI GCGATG 1 cut(s) 391
BtrI CACGTC 1 cut(s) 782
BtsCI GGATG 7 cut(s) 342, 429, 856, 882, 918, 1012, 1203
BtsIMutI CAGTG 3 cut(s) 261, 651, 861
BveI ACCTGC 1 cut(s) 331
Cac8I GCNNGC 1 cut(s) 412
Cfr10I RCCGGY 1 cut(s) 428
Csp6I GTAC 3 cut(s) 559, 751, 1000
CspAI ACCGGT 1 cut(s) 428
CviAII CATG 3 cut(s) 669, 838, 1231
CviQI GTAC 3 cut(s) 559, 751, 1000
DdeI CTNAG 3 cut(s) 114, 489, 903
DpnI GATC 8 cut(s) 153, 167, 759, 805, 816, 830, 1162, 1403
DpnII GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
DraIII CACNNNGTG 1 cut(s) 1342
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
Eco105I TACGTA 1 cut(s) 999
Eco130I CCWWGG 1 cut(s) 610
Eco24I GRGCYC 1 cut(s) 610
Eco31I GGTCTC 2 cut(s) 189, 1121
Eco32I GATATC 1 cut(s) 1362
Eco57I CTGAAG 2 cut(s) 339, 677
Eco88I CYCGRG 1 cut(s) 1124
Eco91I GGTNACC 1 cut(s) 956
EcoO65I GGTNACC 1 cut(s) 956
EcoRII CCWGG 1 cut(s) 703
EcoRV GATATC 1 cut(s) 1362
EcoT14I CCWWGG 1 cut(s) 610
EcoT22I ATGCAT 1 cut(s) 850
EcoT38I GRGCYC 1 cut(s) 610
ErhI CCWWGG 1 cut(s) 610
FaeI CATG 3 cut(s) 672, 841, 1234
FatI CATG 3 cut(s) 668, 837, 1230
FauNDI CATATG 1 cut(s) 824
FblI GTMKAC 2 cut(s) 784, 1044
Fnu4HI GCNGC 5 cut(s) 372, 503, 1181, 1331, 1356
FokI GGATG 7 cut(s) 349, 436, 843, 889, 925, 999, 1190
FriOI GRGCYC 1 cut(s) 610
Fsp4HI GCNGC 5 cut(s) 372, 503, 1181, 1331, 1356
FspBI CTAG 2 cut(s) 9, 159
GluI GCNGC 5 cut(s) 372, 503, 1181, 1331, 1356
GsaI CCCAGC 1 cut(s) 1112
GsuI CTGGAG 2 cut(s) 726, 745
HaeIII GGCC 1 cut(s) 1244
HapII CCGG 1 cut(s) 429
Hin1I GRCGYC 1 cut(s) 245
Hin1II CATG 3 cut(s) 672, 841, 1234
HinfI GANTC 5 cut(s) 71, 483, 700, 727, 1030
HpaII CCGG 1 cut(s) 429
HphI GGTGA 3 cut(s) 264, 302, 1228
Hpy166II GTNNAC 3 cut(s) 753, 785, 1045
Hpy188I TCNGA 6 cut(s) 60, 354, 461, 492, 657, 803
Hpy188III TCNNGA 6 cut(s) 724, 807, 922, 1124, 1126, 1399
Hpy8I GTNNAC 3 cut(s) 753, 785, 1045
HpyAV CCTTC 2 cut(s) 785, 903
HpyCH4III ACNGT 4 cut(s) 623, 865, 1042, 1143
HpyCH4IV ACGT 5 cut(s) 245, 781, 998, 1251, 1341
HpyCH4V TGCA 7 cut(s) 340, 392, 479, 531, 577, 848, 1065
HpyF10VI GCNNNNNNNGC 3 cut(s) 1177, 1189, 1355
HpyF3I CTNAG 3 cut(s) 114, 489, 903
HpySE526I ACGT 5 cut(s) 245, 781, 998, 1251, 1341
Hsp92I GRCGYC 1 cut(s) 245
Hsp92II CATG 3 cut(s) 672, 841, 1234
Kzo9I GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
LmnI GCTCC 3 cut(s) 122, 605, 1338
Lsp1109I GCAGC 3 cut(s) 1192, 1317, 1342
LweI GCATC 3 cut(s) 327, 650, 889
MaeI CTAG 2 cut(s) 9, 159
MaeII ACGT 5 cut(s) 245, 781, 998, 1251, 1341
MaeIII GTNAC 4 cut(s) 270, 308, 956, 994
MalI GATC 8 cut(s) 153, 167, 759, 805, 816, 830, 1162, 1403
MboI GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
MboII GAAGA 9 cut(s) 80, 205, 212, 265, 332, 394, 670, 936, 1385
MflI RGATCY 2 cut(s) 757, 803
MhlI GDGCHC 1 cut(s) 610
MluCI AATT 5 cut(s) 126, 184, 884, 939, 1060
MlyI GAGTC 2 cut(s) 65, 736
MnlI CCTC 2 cut(s) 741, 883
Mph1103I ATGCAT 1 cut(s) 850
MroXI GAANNNNTTC 1 cut(s) 943
MseI TTAA 5 cut(s) 26, 507, 1157, 1292, 1411
MslI CAYNNNNRTG 4 cut(s) 230, 491, 593, 836
MspI CCGG 1 cut(s) 429
MspR9I CCNGG 1 cut(s) 705
Mva1269I GAATGC 1 cut(s) 737
MvaI CCWGG 1 cut(s) 705
MwoI GCNNNNNNNGC 3 cut(s) 1177, 1189, 1355
NdeI CATATG 1 cut(s) 824
NdeII GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
NlaIII CATG 3 cut(s) 672, 841, 1234
NlaIV GGNNCC 1 cut(s) 607
NmeAIII GCCGAG 1 cut(s) 218
NmuCI GTSAC 2 cut(s) 270, 308
NsiI ATGCAT 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 1124
PctI GAATGC 1 cut(s) 737
PdmI GAANNNNTTC 1 cut(s) 943
PfeI GAWTC 3 cut(s) 483, 700, 1030
PfoI TCCNGGA 1 cut(s) 703
PinAI ACCGGT 1 cut(s) 428
PkrI GCNGC 5 cut(s) 373, 504, 1182, 1332, 1357
PleI GAGTC 2 cut(s) 65, 735
PpsI GAGTC 2 cut(s) 65, 735
Ppu21I YACGTR 1 cut(s) 999
Psp6I CCWGG 1 cut(s) 703
PspEI GGTNACC 1 cut(s) 956
PspFI CCCAGC 1 cut(s) 1108
PspGI CCWGG 1 cut(s) 703
PspN4I GGNNCC 1 cut(s) 607
PsuI RGATCY 2 cut(s) 757, 803
RsaI GTAC 3 cut(s) 560, 752, 1001
RsaNI GTAC 3 cut(s) 559, 751, 1000
RseI CAYNNNNRTG 4 cut(s) 230, 491, 593, 836
SaqAI TTAA 5 cut(s) 26, 507, 1157, 1292, 1411
SatI GCNGC 5 cut(s) 372, 503, 1181, 1331, 1356
Sau3AI GATC 8 cut(s) 151, 165, 757, 803, 814, 828, 1160, 1401
SchI GAGTC 2 cut(s) 65, 736
ScrFI CCNGG 1 cut(s) 705
SduI GDGCHC 1 cut(s) 610
SfaNI GCATC 3 cut(s) 327, 650, 889
SfcI CTRYAG 1 cut(s) 864
Sfr274I CTCGAG 1 cut(s) 1124
SlaI CTCGAG 1 cut(s) 1124
SmiMI CAYNNNNRTG 4 cut(s) 230, 491, 593, 836
SmlI CTYRAG 2 cut(s) 100, 1124
SmoI CTYRAG 2 cut(s) 100, 1124
SnaBI TACGTA 1 cut(s) 999
Sse9I AATT 5 cut(s) 126, 184, 884, 939, 1060
SsiI CCGC 2 cut(s) 371, 502
SspI AATATT 1 cut(s) 19
SspMI CTAG 2 cut(s) 9, 159
StyD4I CCNGG 1 cut(s) 703
StyI CCWWGG 1 cut(s) 610
TaaI ACNGT 4 cut(s) 623, 865, 1042, 1143
TaiI ACGT 5 cut(s) 248, 784, 1001, 1254, 1344
TaqI TCGA 5 cut(s) 154, 1125, 1163, 1267, 1275
TaqII GACCGA 1 cut(s) 1373
TasI AATT 5 cut(s) 126, 184, 884, 939, 1060
TatI WGTACW 1 cut(s) 558
TauI GCSGC 2 cut(s) 374, 505
TfiI GAWTC 3 cut(s) 483, 700, 1030
Tru1I TTAA 5 cut(s) 26, 507, 1157, 1292, 1411
Tru9I TTAA 5 cut(s) 26, 507, 1157, 1292, 1411
TscAI CASTG 3 cut(s) 268, 651, 868
TseFI GTSAC 2 cut(s) 270, 308
TseI GCWGC 3 cut(s) 1180, 1330, 1355
Tsp45I GTSAC 2 cut(s) 270, 308
TspDTI ATGAA 7 cut(s) 394, 657, 845, 936, 984, 1219, 1294
TspGWI ACGGA 1 cut(s) 1093
TspRI CASTG 3 cut(s) 268, 651, 868
XapI RAATTY 1 cut(s) 939
XcmI CCANNNNNNNNNTGG 1 cut(s) 1252
XhoI CTCGAG 1 cut(s) 1124
XmiI GTMKAC 2 cut(s) 784, 1044
XmnI GAANNNNTTC 1 cut(s) 943
XspI CTAG 2 cut(s) 9, 159
ZraI GACGTC 1 cut(s) 246
Zsp2I ATGCAT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.