Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0008251

Physical Location & Seq

Genomic Coordinates Forward (+)

3700389 .. 3706534

Gene Structure 6146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G075500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGGATCGGGAAATGGTGGACGCTGGCCCAGTTACGCCTGGACAGGTGTCTTTTTTGCTTGGAATCATCCCAGTATTTGTCACATGGATATATTCGGAGTACTTAGAATATAAAAAATCTTCATCTCATCCTAAAGTTCATTCAGATACTAATCTGGTTGAGTTGGGAGAGGAAACGATCAAGGAAGATGATCGGGCTGTTTTGCTGGAAGGAGGCCTTTCGAGATCAGCATCTACAAAGTTTAATAGTTCATCCATTAAAATAAACTTAATTAGGTTTCTGACTATGGATGACTCTTTTTTACTTGAAAACAGAGCAACTCTTAGAGTGATGTCTGAGCTTGGGGCAATTCTGTTCTATTTCTACATATGTGACCGCACAAGTATACTGGGGTCTTCTACAAAGAATTACAATCGGGATCTGTTCCTCTTTCTGTACCTTCTCCTCGTCATAGTTTCAGCAGTGACATCTTTGAAGAAACATACTGACAGATCAGCATTCTCTGGAAAATCTATACTTTACCTGAATCGGCATCAGACGGAGGAATGGAAAGGGTGGATGCAGGTCCTATTTCTAATGTACCATTACTTTGCCGCAAGCGAGATTTACAATGCAATACGTGTCTTTATTGCTGCATATGTTTGGATGACTGGATTTGGAAACTTTTCCTACTACTACATTAGAAAGGATTTTAGCCTCGCCCGCTTTGCTCAGATGATGTGGCGGCTAAATTTTTTTGTGGCGTTTTGCTGTATTGTTCTTAACAACGACTATATGTTGTATTACATCTGTCCAATGCACACTCTGTACACTCTTATGGTGTATGGAGCCCTTGGCATCTTTAGCAAGTACAATGAGATCAGATCAGTGATGGCTGTAAAGATTCTAGGATGCTTTCTTGCGGTTATCTTGATTTGGGAAATACCTGGAGTTTTTGAAATATTCTTTCGTCCATTATCCTTCTTATTGGGGTATACTGATCCTGCAAAACCAGATCTCCCTCGTCTGCATGAATGGCATTTTAGATCAGGACTTGATCGCTACATATGGATTATTGGAATGATATATGCCTATTATCATCCTAATGTGGAGAAATGGATGGATAAATTGGAGGAATCTGATACCAAAAGGAGGGTCCCAATTAAAGCAGGAATATTTGCCGGTTCTGTGTTTGTTGGTTATCTGTGGTATGAATATATTTACAAGCTGGACAAGGTTTCATACAACAAGTTGCATCCCTACACATCATGGATTCCGATAACTGTATATATATGTCTGCGGAACTTTACTCAGCAGTTGCGGGGTGTTTCTTTGACTCTCTTTGCGTGGCTTGGCAAGATTACTTTGGAAACCTATATTTCACAGTTCCATATCTGGCTGAGATCAAACACACCTAATGGACAGCCTAAGTGGCTTCTCTCTCTCATTCCAGAATATCCCTTGCTCAACTTCATGCTGACAACTGCCATCTATGTTTTGGTATCTCATCGGCTTTTCGAGTTAACTAATACGCTTAAGACAGTGTTTGTACCCACAAAAGACAACCAAAGGCTGCTTTATAATTTTCTTGCAGGGGCGGCCATTTTTACTTGTTTGTATTTCATCTCATTCATTCTTGTTCAGATACCTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010410 GO:0012505 GO:0016051 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045491 GO:0045492 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576 GO:1990937

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cas1_AcylT

Protein Analysis

545

Amino Acids

63.67

Weight (kDa)

8.91

Isoelectric Point (pI)

30.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008251)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29890 AT1G29890 AT1G29890 AT2G34410 AT2G34410 AT2G34410 AT5G46340 AT5G46340
fragaria_vesca	FvH4_3g06190
malus_domestica	MD05G1290200.v1.1 MD10G1266300.v1.1
prunus_persica	Prupe.4G075500_v2.0.a1 Prupe.4G075500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0013141
rosa_laevigata	RLG00000031992
rosa_multiflora	Rmu_sc0004521.1_g000001
rosa_roxburghii	Rroxscaffold_1G00063440
rosa_rugosa	Rorug05G0007400
rosa_samantha	Rh5AG101700 Rh5BG098100 Rh5CG110200 Rh5DG097300
rosa_wichuraiana	Rw5G008890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1560
Acc36I	ACCTGC	1 cut(s)	553
AccI	GTMKAC	2 cut(s)	385, 974
AciI	CCGC	8 cut(s)	376, 594, 703, 724, 902, 1279, 1300, 1577
AclWI	GGATC	3 cut(s)	12, 426, 974
AcoI	YGGCCR	1 cut(s)	1578
AcsI	RAATTY	1 cut(s)	730
AfaI	GTAC	6 cut(s)	101, 437, 581, 809, 851, 1530
AfiI	CCNNNNNNNGG	1 cut(s)	1131
AflII	CTTAAG	1 cut(s)	1514
AflIII	ACRYGT	1 cut(s)	619
AgsI	TTSAA	3 cut(s)	308, 475, 938
AjnI	CCWGG	2 cut(s)	37, 925
AluBI	AGCT	2 cut(s)	340, 1207
AluI	AGCT	2 cut(s)	340, 1207
AlwI	GGATC	3 cut(s)	12, 426, 974
AoxI	GGCC	3 cut(s)	25, 214, 1578
ApeKI	GCWGC	2 cut(s)	632, 1552
ApoI	RAATTY	1 cut(s)	730
ArsI	GACNNNNNNTTYG	2 cut(s)	1119, 1151
Asp700I	GAANNNNTTC	1 cut(s)	664
AspS9I	GGNCC	3 cut(s)	26, 565, 1135
AvaII	GGWCC	2 cut(s)	565, 1135
BanII	GRGCYC	1 cut(s)	832
BbsI	GAAGAC	1 cut(s)	387
BbvI	GCAGC	2 cut(s)	619, 1539
BccI	CCATC	3 cut(s)	865, 1093, 1475
BciT130I	CCWGG	2 cut(s)	39, 927
BfaI	CTAG	1 cut(s)	887
BfrI	CTTAAG	1 cut(s)	1514
BfuAI	ACCTGC	1 cut(s)	553
BglI	GCCNNNNNGGC	1 cut(s)	1411
BglII	AGATCT	1 cut(s)	994
BisI	GCNGC	5 cut(s)	594, 633, 725, 1553, 1578
BlsI	GCNGC	5 cut(s)	595, 634, 726, 1554, 1579
BmcAI	AGTACT	1 cut(s)	101
Bme1390I	CCNGG	2 cut(s)	39, 927
Bme18I	GGWCC	2 cut(s)	565, 1135
BmgT120I	GGNCC	3 cut(s)	26, 565, 1135
BmiI	GGNNCC	3 cut(s)	829, 1136, 1137
BmrFI	CCNGG	2 cut(s)	39, 927
BmrI	ACTGGG	3 cut(s)	23, 65, 398
BmsI	GCATC	6 cut(s)	239, 541, 549, 846, 881, 1243
BmuI	ACTGGG	3 cut(s)	23, 65, 398
BoxI	GACNNNNGTC	1 cut(s)	46
BpiI	GAAGAC	1 cut(s)	387
BpmI	CTGGAG	1 cut(s)	948
BsaAI	YACGTR	1 cut(s)	620
BsaBI	GATNNNNATC	2 cut(s)	150, 229
BsaJI	CCNNGG	1 cut(s)	832
BsaXI	ACNNNNNCTCC	2 cut(s)	981, 1011
Bsc4I	CCNNNNNNNGG	1 cut(s)	1131
Bse118I	RCCGGY	1 cut(s)	1160
Bse1I	ACTGG	4 cut(s)	29, 71, 393, 655
Bse8I	GATNNNNATC	2 cut(s)	150, 229
BseBI	CCWGG	2 cut(s)	39, 927
BseDI	CCNNGG	1 cut(s)	832
BseJI	GATNNNNATC	2 cut(s)	150, 229
BseLI	CCNNNNNNNGG	1 cut(s)	1131
BseMII	CTCAG	4 cut(s)	327, 725, 1304, 1370
BseNI	ACTGG	4 cut(s)	29, 71, 393, 655
BseRI	GAGGAG	1 cut(s)	434
BseXI	GCAGC	2 cut(s)	619, 1539
BshFI	GGCC	3 cut(s)	27, 216, 1580
BsiSI	CCGG	1 cut(s)	1161
BslFI	GGGAC	1 cut(s)	1121
BslI	CCNNNNNNNGG	1 cut(s)	1131
BsmFI	GGGAC	1 cut(s)	1121
BsmI	GAATGC	1 cut(s)	497
BsnI	GGCC	3 cut(s)	27, 216, 1580
Bsp1286I	GDGCHC	1 cut(s)	832
Bsp1407I	TGTACA	1 cut(s)	807
BspACI	CCGC	8 cut(s)	376, 594, 703, 724, 902, 1279, 1300, 1577
BspANI	GGCC	3 cut(s)	27, 216, 1580
BspCNI	CTCAG	4 cut(s)	328, 724, 1303, 1371
BspLI	GGNNCC	3 cut(s)	829, 1136, 1137
BspMI	ACCTGC	1 cut(s)	553
BspPI	GGATC	3 cut(s)	12, 426, 974
BspTI	CTTAAG	1 cut(s)	1514
BsrFI	RCCGGY	1 cut(s)	1160
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	4 cut(s)	29, 71, 393, 655
BssAI	RCCGGY	1 cut(s)	1160
BssECI	CCNNGG	1 cut(s)	832
BssNAI	GTATAC	2 cut(s)	386, 975
BssT1I	CCWWGG	1 cut(s)	832
Bst1107I	GTATAC	2 cut(s)	386, 975
Bst2UI	CCWGG	2 cut(s)	39, 927
Bst4CI	ACNGT	3 cut(s)	1264, 1365, 1522
BstAFI	CTTAAG	1 cut(s)	1514
BstAUI	TGTACA	1 cut(s)	807
BstBAI	YACGTR	1 cut(s)	620
BstC8I	GCNNGC	3 cut(s)	25, 598, 703
BstDEI	CTNAG	7 cut(s)	103, 323, 336, 711, 1290, 1379, 1407
BstMWI	GCNNNNNNNGC	6 cut(s)	702, 707, 843, 1015, 1411, 1577
BstNI	CCWGG	2 cut(s)	39, 927
BstPAI	GACNNNNGTC	1 cut(s)	46
BstSCI	CCNGG	2 cut(s)	37, 925
BstV1I	GCAGC	2 cut(s)	619, 1539
BstV2I	GAAGAC	1 cut(s)	387
BstX2I	RGATCY	2 cut(s)	418, 994
BstYI	RGATCY	2 cut(s)	418, 994
BstZ17I	GTATAC	2 cut(s)	386, 975
BsuRI	GGCC	3 cut(s)	27, 216, 1580
BtsI	GCAGTG	1 cut(s)	468
BtsIMutI	CAGTG	3 cut(s)	468, 873, 1527
BveI	ACCTGC	1 cut(s)	553
Cac8I	GCNNGC	3 cut(s)	25, 598, 703
Cfr10I	RCCGGY	1 cut(s)	1160
Cfr13I	GGNCC	3 cut(s)	26, 565, 1135
CseI	GACGC	1 cut(s)	29
Csp6I	GTAC	6 cut(s)	100, 436, 580, 808, 850, 1529
CviAII	CATG	4 cut(s)	84, 1010, 1248, 1453
CviQI	GTAC	6 cut(s)	100, 436, 580, 808, 850, 1529
DdeI	CTNAG	7 cut(s)	103, 323, 336, 711, 1290, 1379, 1407
EaeI	YGGCCR	1 cut(s)	1578
Eco130I	CCWWGG	1 cut(s)	832
Eco147I	AGGCCT	1 cut(s)	216
Eco24I	GRGCYC	1 cut(s)	832
Eco47I	GGWCC	2 cut(s)	565, 1135
EcoO109I	RGGNCCY	2 cut(s)	565, 1135
EcoRII	CCWGG	2 cut(s)	37, 925
EcoT14I	CCWWGG	1 cut(s)	832
EcoT38I	GRGCYC	1 cut(s)	832
ErhI	CCWWGG	1 cut(s)	832
FaeI	CATG	4 cut(s)	87, 1013, 1251, 1456
FalI	AAGNNNNNCTT	2 cut(s)	201, 233
FaqI	GGGAC	1 cut(s)	1121
FatI	CATG	4 cut(s)	83, 1009, 1247, 1452
FauI	CCCGC	2 cut(s)	710, 1293
FauNDI	CATATG	3 cut(s)	368, 637, 1046
FblI	GTMKAC	2 cut(s)	385, 974
Fnu4HI	GCNGC	5 cut(s)	594, 633, 725, 1553, 1578
FriOI	GRGCYC	1 cut(s)	832
Fsp4HI	GCNGC	5 cut(s)	594, 633, 725, 1553, 1578
FspBI	CTAG	1 cut(s)	887
GluI	GCNGC	5 cut(s)	594, 633, 725, 1553, 1578
GsuI	CTGGAG	1 cut(s)	948
HaeIII	GGCC	3 cut(s)	27, 216, 1580
HapII	CCGG	1 cut(s)	1161
HgaI	GACGC	1 cut(s)	29
Hin1II	CATG	4 cut(s)	87, 1013, 1251, 1456
HincII	GTYRAC	1 cut(s)	1503
HindII	GTYRAC	1 cut(s)	1503
HinfI	GANTC	7 cut(s)	63, 293, 526, 883, 1115, 1252, 1315
HpaI	GTTAAC	1 cut(s)	1503
HpaII	CCGG	1 cut(s)	1161
Hpy166II	GTNNAC	5 cut(s)	19, 386, 810, 975, 1503
Hpy188III	TCNNGA	7 cut(s)	8, 222, 416, 504, 910, 1029, 1430
Hpy8I	GTNNAC	5 cut(s)	19, 386, 810, 975, 1503
HpyAV	CCTTC	3 cut(s)	203, 449, 970
HpyCH4III	ACNGT	3 cut(s)	1264, 1365, 1522
HpyCH4IV	ACGT	1 cut(s)	619
HpyCH4V	TGCA	8 cut(s)	562, 614, 635, 799, 986, 1009, 1234, 1571
HpyF10VI	GCNNNNNNNGC	6 cut(s)	702, 707, 843, 1015, 1411, 1577
HpyF3I	CTNAG	7 cut(s)	103, 323, 336, 711, 1290, 1379, 1407
HpySE526I	ACGT	1 cut(s)	619
Hsp92II	CATG	4 cut(s)	87, 1013, 1251, 1456
KflI	GGGWCCC	1 cut(s)	1135
KspAI	GTTAAC	1 cut(s)	1503
LmnI	GCTCC	1 cut(s)	827
Lsp1109I	GCAGC	2 cut(s)	619, 1539
LweI	GCATC	6 cut(s)	239, 541, 549, 846, 881, 1243
MaeI	CTAG	1 cut(s)	887
MaeII	ACGT	1 cut(s)	619
MaeIII	GTNAC	4 cut(s)	31, 79, 371, 463
MboII	GAAGA	4 cut(s)	111, 197, 387, 487
MflI	RGATCY	2 cut(s)	418, 994
MhlI	GDGCHC	1 cut(s)	832
MluCI	AATT	7 cut(s)	270, 348, 406, 730, 1106, 1140, 1561
MlyI	GAGTC	2 cut(s)	287, 1309
MnlI	CCTC	9 cut(s)	163, 206, 437, 455, 535, 707, 1011, 1105, 1125
MroXI	GAANNNNTTC	1 cut(s)	664
MseI	TTAA	7 cut(s)	243, 258, 269, 762, 1143, 1502, 1515
MslI	CAYNNNNRTG	2 cut(s)	815, 1083
MspCI	CTTAAG	1 cut(s)	1514
MspI	CCGG	1 cut(s)	1161
MspR9I	CCNGG	2 cut(s)	39, 927
Mva1269I	GAATGC	1 cut(s)	497
MvaI	CCWGG	2 cut(s)	39, 927
MwoI	GCNNNNNNNGC	6 cut(s)	702, 707, 843, 1015, 1411, 1577
NdeI	CATATG	3 cut(s)	368, 637, 1046
NlaIII	CATG	4 cut(s)	87, 1013, 1251, 1456
NlaIV	GGNNCC	3 cut(s)	829, 1136, 1137
NmuCI	GTSAC	3 cut(s)	79, 371, 463
PceI	AGGCCT	1 cut(s)	216
PctI	GAATGC	1 cut(s)	497
PdmI	GAANNNNTTC	1 cut(s)	664
PfeI	GAWTC	5 cut(s)	63, 526, 883, 1115, 1252
PkrI	GCNGC	5 cut(s)	595, 634, 726, 1554, 1579
PleI	GAGTC	2 cut(s)	287, 1309
PpsI	GAGTC	2 cut(s)	287, 1309
Ppu21I	YACGTR	1 cut(s)	620
PpuMI	RGGWCCY	2 cut(s)	565, 1135
PshAI	GACNNNNGTC	1 cut(s)	46
PsiI	TTATAA	1 cut(s)	1560
Psp5II	RGGWCCY	2 cut(s)	565, 1135
Psp6I	CCWGG	2 cut(s)	37, 925
PspGI	CCWGG	2 cut(s)	37, 925
PspN4I	GGNNCC	3 cut(s)	829, 1136, 1137
PspPI	GGNCC	3 cut(s)	26, 565, 1135
PspPPI	RGGWCCY	2 cut(s)	565, 1135
PsuI	RGATCY	2 cut(s)	418, 994
RsaI	GTAC	6 cut(s)	101, 437, 581, 809, 851, 1530
RsaNI	GTAC	6 cut(s)	100, 436, 580, 808, 850, 1529
RseI	CAYNNNNRTG	2 cut(s)	815, 1083
SaqAI	TTAA	7 cut(s)	243, 258, 269, 762, 1143, 1502, 1515
SatI	GCNGC	5 cut(s)	594, 633, 725, 1553, 1578
Sau96I	GGNCC	3 cut(s)	26, 565, 1135
ScaI	AGTACT	1 cut(s)	101
SchI	GAGTC	2 cut(s)	287, 1309
ScrFI	CCNGG	2 cut(s)	39, 927
SduI	GDGCHC	1 cut(s)	832
SfaNI	GCATC	6 cut(s)	239, 541, 549, 846, 881, 1243
SinI	GGWCC	2 cut(s)	565, 1135
SmiMI	CAYNNNNRTG	2 cut(s)	815, 1083
SmlI	CTYRAG	1 cut(s)	1514
SmoI	CTYRAG	1 cut(s)	1514
Sse9I	AATT	7 cut(s)	270, 348, 406, 730, 1106, 1140, 1561
SseBI	AGGCCT	1 cut(s)	216
SsiI	CCGC	8 cut(s)	376, 594, 703, 724, 902, 1279, 1300, 1577
SspI	AATATT	2 cut(s)	942, 1155
SspMI	CTAG	1 cut(s)	887
StuI	AGGCCT	1 cut(s)	216
StyD4I	CCNGG	2 cut(s)	37, 925
StyI	CCWWGG	1 cut(s)	832
TaaI	ACNGT	3 cut(s)	1264, 1365, 1522
TaiI	ACGT	1 cut(s)	622
TaqI	TCGA	2 cut(s)	221, 1497
TasI	AATT	7 cut(s)	270, 348, 406, 730, 1106, 1140, 1561
TatI	WGTACW	3 cut(s)	99, 807, 849
TauI	GCSGC	3 cut(s)	596, 727, 1580
TfiI	GAWTC	5 cut(s)	63, 526, 883, 1115, 1252
Tru1I	TTAA	7 cut(s)	243, 258, 269, 762, 1143, 1502, 1515
Tru9I	TTAA	7 cut(s)	243, 258, 269, 762, 1143, 1502, 1515
TscAI	CASTG	3 cut(s)	468, 873, 1527
TseFI	GTSAC	3 cut(s)	79, 371, 463
TseI	GCWGC	2 cut(s)	632, 1552
Tsp45I	GTSAC	3 cut(s)	79, 371, 463
TspDTI	ATGAA	9 cut(s)	111, 128, 240, 1026, 1206, 1209, 1441, 1591, 1600
TspGWI	ACGGA	1 cut(s)	554
TspRI	CASTG	3 cut(s)	468, 873, 1527
Vha464I	CTTAAG	1 cut(s)	1514
VpaK11BI	GGWCC	2 cut(s)	565, 1135
XapI	RAATTY	1 cut(s)	730
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1474
XmiI	GTMKAC	2 cut(s)	385, 974
XmnI	GAANNNNTTC	1 cut(s)	664
XspI	CTAG	1 cut(s)	887
ZrmI	AGTACT	1 cut(s)	101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.