TIFY 5A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30135 AT2G34600 |
| fragaria_vesca | FvH4_3g05360 FvH4_3g05370 |
| malus_domestica | MD05G1282000.v1.1 MD05G1282100.v1.1 MD10G1260700.v1.1 |
| prunus_persica | Prupe.4G082500_v2.0.a1 |
| pyrus_communis | pycom10g21670 pycom10g21680 |
| rosa_chinensis | RchiOBHm_Chr5g0014381 RchiOBHm_Chr5g0014391 |
| rosa_laevigata | RLG00000032103 RLG00000032104 |
| rosa_multiflora | Rmu_co8215942.1_g000001 Rmu_co8389687.1_g000001 Rmu_sc0039946.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00062200 Rroxscaffold_1G00062210 |
| rosa_rugosa | Rorug05G0017600 Rorug05G0017700 |
| rosa_samantha | Rh5AG112400 Rh5AG112500 Rh5BG109100 Rh5BG109200 Rh5CG120900 Rh5CG121000 Rh5DG108100 Rh5DG108200 |
| rosa_wichuraiana | Rw5G009750 Rw5G009760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 272 |
| AclWI | GGATC | 2 cut(s) | 251, 264 |
| AcsI | RAATTY | 2 cut(s) | 354, 360 |
| AcuI | CTGAAG | 4 cut(s) | 51, 156, 173, 326 |
| AfaI | GTAC | 1 cut(s) | 380 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 190, 249 |
| AgsI | TTSAA | 1 cut(s) | 365 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 324, 356 |
| AluBI | AGCT | 3 cut(s) | 7, 295, 368 |
| AluI | AGCT | 3 cut(s) | 7, 295, 368 |
| AlwI | GGATC | 2 cut(s) | 251, 264 |
| ApoI | RAATTY | 2 cut(s) | 354, 360 |
| AsuHPI | GGTGA | 1 cut(s) | 366 |
| AsuII | TTCGAA | 1 cut(s) | 358 |
| BamHI | GGATCC | 1 cut(s) | 256 |
| BccI | CCATC | 1 cut(s) | 192 |
| BfmI | CTRYAG | 1 cut(s) | 8 |
| BmiI | GGNNCC | 1 cut(s) | 258 |
| BmsI | GCATC | 1 cut(s) | 320 |
| Bpu14I | TTCGAA | 1 cut(s) | 358 |
| Bsa29I | ATCGAT | 2 cut(s) | 200, 209 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 190, 249 |
| Bse1I | ACTGG | 1 cut(s) | 96 |
| BseCI | ATCGAT | 2 cut(s) | 200, 209 |
| BseGI | GGATG | 1 cut(s) | 239 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 190, 249 |
| BseNI | ACTGG | 1 cut(s) | 96 |
| Bsh1285I | CGRYCG | 1 cut(s) | 213 |
| BshVI | ATCGAT | 2 cut(s) | 200, 209 |
| BsiEI | CGRYCG | 1 cut(s) | 213 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 190, 249 |
| Bsp119I | TTCGAA | 1 cut(s) | 358 |
| Bsp143I | GATC | 3 cut(s) | 197, 210, 256 |
| BspDI | ATCGAT | 2 cut(s) | 200, 209 |
| BspLI | GGNNCC | 1 cut(s) | 258 |
| BspPI | GGATC | 2 cut(s) | 251, 264 |
| BspT104I | TTCGAA | 1 cut(s) | 358 |
| BsrI | ACTGG | 1 cut(s) | 96 |
| BssMI | GATC | 3 cut(s) | 197, 210, 256 |
| Bst4CI | ACNGT | 1 cut(s) | 378 |
| BstBI | TTCGAA | 1 cut(s) | 358 |
| BstC8I | GCNNGC | 1 cut(s) | 217 |
| BstF5I | GGATG | 1 cut(s) | 239 |
| BstKTI | GATC | 3 cut(s) | 200, 213, 259 |
| BstMBI | GATC | 3 cut(s) | 197, 210, 256 |
| BstMCI | CGRYCG | 1 cut(s) | 213 |
| BstSFI | CTRYAG | 1 cut(s) | 8 |
| BstX2I | RGATCY | 1 cut(s) | 256 |
| BstYI | RGATCY | 1 cut(s) | 256 |
| Bsu15I | ATCGAT | 2 cut(s) | 200, 209 |
| BsuTUI | ATCGAT | 2 cut(s) | 200, 209 |
| BtsCI | GGATG | 1 cut(s) | 239 |
| Cac8I | GCNNGC | 1 cut(s) | 217 |
| ClaI | ATCGAT | 2 cut(s) | 200, 209 |
| Csp6I | GTAC | 1 cut(s) | 379 |
| CviJI | RGCY | 3 cut(s) | 7, 295, 368 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 295, 368 |
| CviQI | GTAC | 1 cut(s) | 379 |
| DpnI | GATC | 3 cut(s) | 199, 212, 258 |
| DpnII | GATC | 3 cut(s) | 197, 210, 256 |
| Eco57I | CTGAAG | 4 cut(s) | 51, 156, 173, 326 |
| EcoRI | GAATTC | 1 cut(s) | 360 |
| FaiI | YATR | 2 cut(s) | 54, 288 |
| FblI | GTMKAC | 1 cut(s) | 272 |
| FokI | GGATG | 1 cut(s) | 226 |
| HincII | GTYRAC | 1 cut(s) | 273 |
| HindII | GTYRAC | 1 cut(s) | 273 |
| HinfI | GANTC | 4 cut(s) | 56, 62, 89, 125 |
| HphI | GGTGA | 1 cut(s) | 366 |
| Hpy166II | GTNNAC | 1 cut(s) | 273 |
| Hpy188I | TCNGA | 5 cut(s) | 61, 70, 175, 256, 345 |
| Hpy188III | TCNNGA | 2 cut(s) | 102, 387 |
| Hpy8I | GTNNAC | 1 cut(s) | 273 |
| Hpy99I | CGWCG | 1 cut(s) | 393 |
| HpyCH4III | ACNGT | 1 cut(s) | 378 |
| Kzo9I | GATC | 3 cut(s) | 197, 210, 256 |
| LpnPI | CCDG | 3 cut(s) | 87, 109, 176 |
| LweI | GCATC | 1 cut(s) | 320 |
| MaeIII | GTNAC | 2 cut(s) | 20, 178 |
| MalI | GATC | 3 cut(s) | 199, 212, 258 |
| MboI | GATC | 3 cut(s) | 197, 210, 256 |
| MboII | GAAGA | 5 cut(s) | 57, 134, 162, 179, 332 |
| MflI | RGATCY | 1 cut(s) | 256 |
| MluCI | AATT | 4 cut(s) | 16, 141, 354, 360 |
| MmeI | TCCRAC | 1 cut(s) | 234 |
| MnlI | CCTC | 4 cut(s) | 88, 253, 270, 286 |
| NdeII | GATC | 3 cut(s) | 197, 210, 256 |
| NlaIV | GGNNCC | 1 cut(s) | 258 |
| NmuCI | GTSAC | 1 cut(s) | 20 |
| NspV | TTCGAA | 1 cut(s) | 358 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 206, 355 |
| PfeI | GAWTC | 4 cut(s) | 56, 62, 89, 125 |
| Ple19I | CGATCG | 1 cut(s) | 213 |
| PspN4I | GGNNCC | 1 cut(s) | 258 |
| PsuI | RGATCY | 1 cut(s) | 256 |
| PvuI | CGATCG | 1 cut(s) | 213 |
| RsaI | GTAC | 1 cut(s) | 380 |
| RsaNI | GTAC | 1 cut(s) | 379 |
| SalI | GTCGAC | 1 cut(s) | 271 |
| Sau3AI | GATC | 3 cut(s) | 197, 210, 256 |
| SetI | ASST | 5 cut(s) | 9, 80, 278, 297, 370 |
| SfaNI | GCATC | 1 cut(s) | 320 |
| SfcI | CTRYAG | 1 cut(s) | 8 |
| SfuI | TTCGAA | 1 cut(s) | 358 |
| Sse9I | AATT | 4 cut(s) | 16, 141, 354, 360 |
| TaaI | ACNGT | 1 cut(s) | 378 |
| TaqI | TCGA | 4 cut(s) | 200, 209, 272, 358 |
| TasI | AATT | 4 cut(s) | 16, 141, 354, 360 |
| TfiI | GAWTC | 4 cut(s) | 56, 62, 89, 125 |
| TseFI | GTSAC | 1 cut(s) | 20 |
| Tsp45I | GTSAC | 1 cut(s) | 20 |
| TspDTI | ATGAA | 5 cut(s) | 17, 135, 242, 272, 332 |
| TspGWI | ACGGA | 1 cut(s) | 364 |
| XapI | RAATTY | 2 cut(s) | 354, 360 |
| XmiI | GTMKAC | 1 cut(s) | 272 |