TIFY 5A-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G30135 AT2G34600 |
| fragaria_vesca | FvH4_3g05360 FvH4_3g05370 |
| malus_domestica | MD05G1282000.v1.1 MD05G1282100.v1.1 MD10G1260700.v1.1 |
| prunus_persica | Prupe.4G082500_v2.0.a1 |
| pyrus_communis | pycom10g21670 pycom10g21680 |
| rosa_chinensis | RchiOBHm_Chr5g0014381 RchiOBHm_Chr5g0014391 |
| rosa_laevigata | RLG00000032103 RLG00000032104 |
| rosa_multiflora | Rmu_co8215942.1_g000001 Rmu_co8389687.1_g000001 Rmu_sc0039946.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00062200 Rroxscaffold_1G00062210 |
| rosa_rugosa | Rorug05G0017600 Rorug05G0017700 |
| rosa_samantha | Rh5AG112400 Rh5AG112500 Rh5BG109100 Rh5BG109200 Rh5CG120900 Rh5CG121000 Rh5DG108100 Rh5DG108200 |
| rosa_wichuraiana | Rw5G009750 Rw5G009760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 99 |
| AciI | CCGC | 1 cut(s) | 182 |
| AcuI | CTGAAG | 1 cut(s) | 143 |
| AcvI | CACGTG | 1 cut(s) | 314 |
| AfaI | GTAC | 1 cut(s) | 223 |
| AluBI | AGCT | 3 cut(s) | 63, 109, 157 |
| AluI | AGCT | 3 cut(s) | 63, 109, 157 |
| AoxI | GGCC | 1 cut(s) | 162 |
| ApeKI | GCWGC | 3 cut(s) | 106, 294, 297 |
| AsuHPI | GGTGA | 2 cut(s) | 65, 258 |
| BbrPI | CACGTG | 1 cut(s) | 314 |
| BbvI | GCAGC | 3 cut(s) | 118, 306, 309 |
| BceAI | ACGGC | 1 cut(s) | 285 |
| BfaI | CTAG | 1 cut(s) | 26 |
| BfmI | CTRYAG | 1 cut(s) | 121 |
| BfuAI | ACCTGC | 1 cut(s) | 99 |
| BisI | GCNGC | 4 cut(s) | 107, 183, 295, 298 |
| BlsI | GCNGC | 4 cut(s) | 108, 184, 296, 299 |
| BmiI | GGNNCC | 1 cut(s) | 374 |
| BsaAI | YACGTR | 1 cut(s) | 314 |
| BseGI | GGATG | 1 cut(s) | 385 |
| BseMII | CTCAG | 1 cut(s) | 144 |
| BseXI | GCAGC | 3 cut(s) | 118, 306, 309 |
| BsgI | GTGCAG | 1 cut(s) | 260 |
| BshFI | GGCC | 1 cut(s) | 164 |
| BsnI | GGCC | 1 cut(s) | 164 |
| BspACI | CCGC | 1 cut(s) | 182 |
| BspANI | GGCC | 1 cut(s) | 164 |
| BspCNI | CTCAG | 1 cut(s) | 145 |
| BspLI | GGNNCC | 1 cut(s) | 374 |
| BspMI | ACCTGC | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 2 cut(s) | 125, 208 |
| BstBAI | YACGTR | 1 cut(s) | 314 |
| BstC8I | GCNNGC | 1 cut(s) | 275 |
| BstDEI | CTNAG | 1 cut(s) | 153 |
| BstF5I | GGATG | 1 cut(s) | 385 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 106 |
| BstSFI | CTRYAG | 1 cut(s) | 121 |
| BstV1I | GCAGC | 3 cut(s) | 118, 306, 309 |
| BsuRI | GGCC | 1 cut(s) | 164 |
| BtsCI | GGATG | 1 cut(s) | 385 |
| BtsI | GCAGTG | 1 cut(s) | 338 |
| BtsIMutI | CAGTG | 4 cut(s) | 130, 150, 213, 338 |
| BveI | ACCTGC | 1 cut(s) | 99 |
| Cac8I | GCNNGC | 1 cut(s) | 275 |
| Csp6I | GTAC | 1 cut(s) | 222 |
| CviJI | RGCY | 8 cut(s) | 63, 109, 157, 164, 170, 273, 300, 375 |
| CviKI_1 | RGCY | 8 cut(s) | 63, 109, 157, 164, 170, 273, 300, 375 |
| CviQI | GTAC | 1 cut(s) | 222 |
| DdeI | CTNAG | 1 cut(s) | 153 |
| Eco57I | CTGAAG | 1 cut(s) | 143 |
| Eco72I | CACGTG | 1 cut(s) | 314 |
| FaiI | YATR | 4 cut(s) | 255, 292, 329, 396 |
| Fnu4HI | GCNGC | 4 cut(s) | 107, 183, 295, 298 |
| FokI | GGATG | 1 cut(s) | 372 |
| Fsp4HI | GCNGC | 4 cut(s) | 107, 183, 295, 298 |
| FspBI | CTAG | 1 cut(s) | 26 |
| GluI | GCNGC | 4 cut(s) | 107, 183, 295, 298 |
| HaeIII | GGCC | 1 cut(s) | 164 |
| HinfI | GANTC | 1 cut(s) | 238 |
| HphI | GGTGA | 2 cut(s) | 65, 258 |
| Hpy188I | TCNGA | 4 cut(s) | 49, 145, 237, 372 |
| Hpy188III | TCNNGA | 2 cut(s) | 20, 86 |
| HpyCH4III | ACNGT | 2 cut(s) | 125, 208 |
| HpyCH4IV | ACGT | 1 cut(s) | 313 |
| HpyCH4V | TGCA | 5 cut(s) | 15, 94, 277, 294, 343 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 106 |
| HpyF3I | CTNAG | 1 cut(s) | 153 |
| HpySE526I | ACGT | 1 cut(s) | 313 |
| LmnI | GCTCC | 2 cut(s) | 68, 372 |
| LpnPI | CCDG | 6 cut(s) | 5, 73, 104, 146, 178, 287 |
| Lsp1109I | GCAGC | 3 cut(s) | 118, 306, 309 |
| MaeI | CTAG | 1 cut(s) | 26 |
| MaeII | ACGT | 1 cut(s) | 313 |
| MaeIII | GTNAC | 2 cut(s) | 148, 336 |
| MboII | GAAGA | 4 cut(s) | 33, 36, 255, 343 |
| MluCI | AATT | 3 cut(s) | 257, 402, 409 |
| MlyI | GAGTC | 1 cut(s) | 247 |
| MnlI | CCTC | 2 cut(s) | 78, 334 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 106 |
| NlaIV | GGNNCC | 1 cut(s) | 374 |
| NmuCI | GTSAC | 2 cut(s) | 148, 336 |
| PkrI | GCNGC | 4 cut(s) | 108, 184, 296, 299 |
| PleI | GAGTC | 1 cut(s) | 246 |
| PmaCI | CACGTG | 1 cut(s) | 314 |
| PmlI | CACGTG | 1 cut(s) | 314 |
| PpsI | GAGTC | 1 cut(s) | 246 |
| Ppu21I | YACGTR | 1 cut(s) | 314 |
| PspCI | CACGTG | 1 cut(s) | 314 |
| PspN4I | GGNNCC | 1 cut(s) | 374 |
| RsaI | GTAC | 1 cut(s) | 223 |
| RsaNI | GTAC | 1 cut(s) | 222 |
| SatI | GCNGC | 4 cut(s) | 107, 183, 295, 298 |
| SchI | GAGTC | 1 cut(s) | 247 |
| SetI | ASST | 5 cut(s) | 65, 93, 111, 159, 316 |
| SfcI | CTRYAG | 1 cut(s) | 121 |
| Sse9I | AATT | 3 cut(s) | 257, 402, 409 |
| SsiI | CCGC | 1 cut(s) | 182 |
| SspMI | CTAG | 1 cut(s) | 26 |
| TaaI | ACNGT | 2 cut(s) | 125, 208 |
| TaiI | ACGT | 1 cut(s) | 316 |
| TasI | AATT | 3 cut(s) | 257, 402, 409 |
| TauI | GCSGC | 1 cut(s) | 185 |
| TscAI | CASTG | 4 cut(s) | 130, 157, 213, 345 |
| TseFI | GTSAC | 2 cut(s) | 148, 336 |
| TseI | GCWGC | 3 cut(s) | 106, 294, 297 |
| Tsp45I | GTSAC | 2 cut(s) | 148, 336 |
| TspDTI | ATGAA | 3 cut(s) | 66, 270, 344 |
| TspRI | CASTG | 4 cut(s) | 130, 157, 213, 345 |
| XspI | CTAG | 1 cut(s) | 26 |