AT1G30270

Non-specific serine threonine protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
10654800 .. 10658924
4125 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30270.2

Sequence Viewer

Length: 1449 bp
ATGGCTTCTCGAACAACGCCTTCACGATCGACTCCTTCACGATCAACGCCTTCTGGTAGTTCTTCTGGTGGTAGGACACGAGTTGGTAAGTATGAGCTTGGACGAACTTTGGGTGAAGGAACTTTCGCTAAGGTCAAATTCGCTAGAAATGTTGAGAATGGTGATAATGTCGCTATTAAGGTTATTGATAAAGAGAAAGTTCTGAAAAATAAGATGATCGCTCAGATCAAGCGTGAGATTTCGACGATGAAATTGATCAAGCACCCGAATGTCATTCGTATGTTTGAGGTGATGGCTAGCAAAACTAAGATCTACTTCGTTTTGGAATTCGTCACTGGTGGGGAGCTTTTCGATAAAATTTCAAGCAATGGGAGATTGAAGGAAGATGAGGCGAGGAAGTATTTCCAACAGCTGATTAATGCGGTTGATTATTGTCATAGCAGGGGAGTTTATCATAGAGACCTTAAGCCAGAAAATTTGCTTTTGGATGCTAATGGTGCTTTGAAAGTGTCTGACTTTGGATTGAGCGCTCTACCTCAGCAAGTTCGAGAGGATGGGTTACTTCACACAACCTGTGGAACACCCAATTATGTTGCTCCGGAGGTAATCAACAACAAAGGTTATGATGGAGCGAAGGCTGATTTGTGGTCTTGTGGAGTAATTCTCTTTGTTTTAATGGCTGGTTATTTACCTTTTGAAGATTCTAACCTGACGTCGTTATATAAAAAGATATTCAAAGCAGAATTTACTTGCCCTCCCTGGTTCTCTGCAAGTGCTAAGAAGTTAATCAAAAGAATTCTGGATCCCAATCCAGCAACGAGGATTACATTTGCTGAGGTCATTGAAAATGAGTGGTTTAAAAAAGGGTATAAAGCACCTAAATTTGAGAATGCTGATGTCAGCCTTGATGATGTTGATGCAATCTTTGATGACTCAGGGGAGTCTAAGAATCTTGTTGTGGAGAGGCGAGAAGAAGGACTCAAAACACCAGTAACGATGAATGCTTTTGAGCTCATCTCGACATCCCAGGGTCTCAATCTCGGTTCACTTTTCGAAAAACAAATGGGGCTGGTGAAACGAAAAACTCGATTTACTTCCAAATCTTCGGCTAATGAGATAGTTACAAAAATTGAGGCTGCGGCAGCACCTATGGGGTTTGATGTCAAGACAAATAACTACAAGATGAAGCTGACAGGAGAGAAATCAGGCCGCAAGGGTCAGTTGGCAGTTGCCACTGAGGTTTTTCAAGTTGCTCCATCTCTTTACATGGTTGAAATGCGAAAATCAGGGGGTGACACATTGGAATTCCACAAGTTTTACAAGAACCTTACCACGGGACTTAAGGACATTGTTTGGAAAACCATCGACGAAGAGAAAGAGGAAGGAACCGATGGTGGTGGTACTAATGGTGCCATGGCTAACCGGACAATTGCAAAACAGTCGACATAA

Protein Analysis

482

Amino Acids

53.51

Weight (kDa)

9.25

Isoelectric Point (pI)

32.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 31 - 286 7.4e-77 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 32 - 282 5.5e-40 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 115 - 268 2.1e-06 Kinase-like
NAF PF03822 330 - 389 2.5e-21 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 716
AccB1I GGYRCC 1 cut(s) 1409
AccI GTMKAC 1 cut(s) 1442
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 3 cut(s) 422, 1139, 1210
AclWI GGATC 2 cut(s) 797, 810
AcsI RAATTY 8 cut(s) 137, 326, 357, 475, 743, 795, 881, 1304
AcyI GRCGYC 1 cut(s) 713
AfaI GTAC 1 cut(s) 1402
AfeI AGCGCT 1 cut(s) 529
AfiI CCNNNNNNNGG 1 cut(s) 1333
AflII CTTAAG 2 cut(s) 464, 1340
AgsI TTSAA 8 cut(s) 363, 379, 505, 698, 736, 845, 1247, 1274
AjnI CCWGG 2 cut(s) 758, 1026
AluBI AGCT 5 cut(s) 97, 346, 412, 1012, 1189
AluI AGCT 5 cut(s) 97, 346, 412, 1012, 1189
Alw21I GWGCWC 1 cut(s) 1014
Alw26I GTCTC 2 cut(s) 453, 1037
AlwI GGATC 2 cut(s) 797, 810
Aor13HI TCCGGA 1 cut(s) 598
Aor51HI AGCGCT 1 cut(s) 529
AoxI GGCC 1 cut(s) 1207
ApeKI GCWGC 2 cut(s) 1136, 1142
ApoI RAATTY 8 cut(s) 137, 326, 357, 475, 743, 795, 881, 1304
AseI ATTAAT 1 cut(s) 417
Asp700I GAANNNNTTC 1 cut(s) 401
AspLEI GCGC 1 cut(s) 530
AsuHPI GGTGA 5 cut(s) 125, 173, 301, 1084, 1304
AsuII TTCGAA 1 cut(s) 1053
AsuNHI GCTAGC 1 cut(s) 296
BamHI GGATCC 1 cut(s) 802
BanI GGYRCC 1 cut(s) 1409
BanII GRGCYC 1 cut(s) 1014
BauI CACGAG 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 1014
BbvCI CCTCAGC 2 cut(s) 537, 834
BbvI GCAGC 2 cut(s) 1123, 1154
BccI CCATC 6 cut(s) 286, 548, 620, 1264, 1370, 1385
BcgI CGANNNNNNTGC 1 cut(s) 1422
BciT130I CCWGG 2 cut(s) 760, 1028
BclI TGATCA 1 cut(s) 255
BcoDI GTCTC 2 cut(s) 453, 1037
BfaI CTAG 2 cut(s) 144, 297
BfoI RGCGCY 1 cut(s) 531
BfrI CTTAAG 2 cut(s) 464, 1340
BglII AGATCT 1 cut(s) 309
BisI GCNGC 4 cut(s) 1137, 1140, 1143, 1210
BlsI GCNGC 4 cut(s) 1138, 1141, 1144, 1211
Bme1390I CCNGG 2 cut(s) 760, 1028
BmiI GGNNCC 3 cut(s) 804, 1387, 1411
BmrFI CCNGG 2 cut(s) 760, 1028
BmsI GCATC 2 cut(s) 478, 907
BmtI GCTAGC 1 cut(s) 300
BplI GAGNNNNNCTC 4 cut(s) 648, 680, 1001, 1033
Bpu10I CCTNAGC 3 cut(s) 129, 537, 834
Bpu14I TTCGAA 1 cut(s) 1053
BsaBI GATNNNNATC 1 cut(s) 807
BsaHI GRCGYC 1 cut(s) 713
BsaI GGTCTC 2 cut(s) 453, 1037
BsaJI CCNNGG 5 cut(s) 758, 1026, 1027, 1332, 1413
BsaWI WCCGGW 2 cut(s) 598, 1422
BsaXI ACNNNNNCTCC 2 cut(s) 739, 769
Bsc4I CCNNNNNNNGG 1 cut(s) 1333
Bse1I ACTGG 2 cut(s) 340, 989
Bse3DI GCAATG 1 cut(s) 373
Bse8I GATNNNNATC 1 cut(s) 807
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 2 cut(s) 760, 1028
BseDI CCNNGG 5 cut(s) 758, 1026, 1027, 1332, 1413
BseGI GGATG 3 cut(s) 493, 559, 1022
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 1 cut(s) 1333
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 5 cut(s) 236, 551, 825, 948, 1227
BseNI ACTGG 2 cut(s) 340, 989
BseXI GCAGC 2 cut(s) 1123, 1154
Bsh1285I CGRYCG 1 cut(s) 29
BshFI GGCC 1 cut(s) 1209
BshNI GGYRCC 1 cut(s) 1409
BsiEI CGRYCG 1 cut(s) 29
BsiHKAI GWGCWC 1 cut(s) 1014
BsiSI CCGG 2 cut(s) 599, 1423
BslFI GGGAC 1 cut(s) 1350
BslI CCNNNNNNNGG 1 cut(s) 1333
BsmAI GTCTC 2 cut(s) 453, 1037
BsmFI GGGAC 1 cut(s) 1350
BsmI GAATGC 2 cut(s) 895, 1006
BsnI GGCC 1 cut(s) 1209
Bso31I GGTCTC 2 cut(s) 453, 1037
Bsp119I TTCGAA 1 cut(s) 1053
Bsp1286I GDGCHC 1 cut(s) 1014
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
Bsp19I CCATGG 1 cut(s) 1413
BspACI CCGC 3 cut(s) 422, 1139, 1210
BspANI GGCC 1 cut(s) 1209
BspCNI CTCAG 5 cut(s) 235, 550, 826, 947, 1228
BspEI TCCGGA 1 cut(s) 598
BspLI GGNNCC 3 cut(s) 804, 1387, 1411
BspOI GCTAGC 1 cut(s) 300
BspPI GGATC 2 cut(s) 797, 810
BspT104I TTCGAA 1 cut(s) 1053
BspT107I GGYRCC 1 cut(s) 1409
BspTI CTTAAG 2 cut(s) 464, 1340
BspTNI GGTCTC 2 cut(s) 453, 1037
BsrDI GCAATG 1 cut(s) 373
BsrI ACTGG 2 cut(s) 340, 989
BssECI CCNNGG 5 cut(s) 758, 1026, 1027, 1332, 1413
BssMI GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
BssNI GRCGYC 1 cut(s) 713
BssSI CACGAG 1 cut(s) 78
BssT1I CCWWGG 1 cut(s) 1413
Bst2BI CACGAG 1 cut(s) 78
Bst2UI CCWGG 2 cut(s) 760, 1028
Bst4CI ACNGT 1 cut(s) 1440
Bst6I CTCTTC 1 cut(s) 1365
BstACI GRCGYC 1 cut(s) 713
BstAFI CTTAAG 2 cut(s) 464, 1340
BstBI TTCGAA 1 cut(s) 1053
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 9 cut(s) 129, 222, 306, 537, 777, 834, 934, 945, 1236
BstDSI CCRYGG 2 cut(s) 1332, 1413
BstF5I GGATG 3 cut(s) 493, 559, 1022
BstH2I RGCGCY 1 cut(s) 531
BstHHI GCGC 1 cut(s) 530
BstKTI GATC 7 cut(s) 29, 44, 219, 228, 258, 312, 805
BstMAI GTCTC 2 cut(s) 453, 1037
BstMBI GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
BstMCI CGRYCG 1 cut(s) 29
BstMWI GCNNNNNNNGC 2 cut(s) 497, 1142
BstNI CCWGG 2 cut(s) 760, 1028
BstSCI CCNGG 2 cut(s) 758, 1026
BstV1I GCAGC 2 cut(s) 1123, 1154
BstX2I RGATCY 2 cut(s) 309, 802
BstYI RGATCY 2 cut(s) 309, 802
BsuRI GGCC 1 cut(s) 1209
BtgI CCRYGG 2 cut(s) 1332, 1413
BtsCI GGATG 3 cut(s) 493, 559, 1022
BtsIMutI CAGTG 2 cut(s) 333, 1233
Cac8I GCNNGC 1 cut(s) 298
CfoI GCGC 1 cut(s) 530
Csp6I GTAC 1 cut(s) 1401
CviAII CATG 2 cut(s) 1267, 1414
CviQI GTAC 1 cut(s) 1401
DdeI CTNAG 9 cut(s) 129, 222, 306, 537, 777, 834, 934, 945, 1236
DpnI GATC 7 cut(s) 28, 43, 218, 227, 257, 311, 804
DpnII GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
DraI TTTAAA 1 cut(s) 859
Eam1104I CTCTTC 1 cut(s) 1365
EarI CTCTTC 1 cut(s) 1365
Ecl136II GAGCTC 1 cut(s) 1012
Eco130I CCWWGG 1 cut(s) 1413
Eco24I GRGCYC 1 cut(s) 1014
Eco31I GGTCTC 2 cut(s) 453, 1037
Eco47III AGCGCT 1 cut(s) 529
Eco53kI GAGCTC 1 cut(s) 1012
EcoICRI GAGCTC 1 cut(s) 1012
EcoRI GAATTC 3 cut(s) 326, 795, 1304
EcoRII CCWGG 2 cut(s) 758, 1026
EcoT14I CCWWGG 1 cut(s) 1413
EcoT38I GRGCYC 1 cut(s) 1014
ErhI CCWWGG 1 cut(s) 1413
FaeI CATG 2 cut(s) 1270, 1417
FalI AAGNNNNNCTT 2 cut(s) 299, 331
FaqI GGGAC 1 cut(s) 1350
FatI CATG 2 cut(s) 1266, 1413
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 1442
Fnu4HI GCNGC 4 cut(s) 1137, 1140, 1143, 1210
FokI GGATG 3 cut(s) 500, 566, 1009
FriOI GRGCYC 1 cut(s) 1014
Fsp4HI GCNGC 4 cut(s) 1137, 1140, 1143, 1210
FspBI CTAG 2 cut(s) 144, 297
GlaI GCGC 1 cut(s) 529
GluI GCNGC 4 cut(s) 1137, 1140, 1143, 1210
HaeII RGCGCY 1 cut(s) 531
HaeIII GGCC 1 cut(s) 1209
HapII CCGG 2 cut(s) 599, 1423
HhaI GCGC 1 cut(s) 530
Hin1I GRCGYC 1 cut(s) 713
Hin1II CATG 2 cut(s) 1270, 1417
Hin6I GCGC 1 cut(s) 528
HinP1I GCGC 1 cut(s) 528
HincII GTYRAC 1 cut(s) 1443
HindII GTYRAC 1 cut(s) 1443
HinfI GANTC 6 cut(s) 31, 701, 932, 941, 949, 978
HpaII CCGG 2 cut(s) 599, 1423
HphI GGTGA 5 cut(s) 125, 173, 301, 1084, 1304
Hpy166II GTNNAC 2 cut(s) 1046, 1443
Hpy188I TCNGA 3 cut(s) 204, 225, 514
Hpy188III TCNNGA 8 cut(s) 9, 24, 39, 548, 599, 800, 1018, 1165
Hpy8I GTNNAC 2 cut(s) 1046, 1443
Hpy99I CGWCG 3 cut(s) 247, 718, 1370
HpyAV CCTTC 8 cut(s) 30, 45, 60, 110, 373, 628, 968, 1376
HpyCH4III ACNGT 1 cut(s) 1440
HpyCH4IV ACGT 1 cut(s) 713
HpyCH4V TGCA 3 cut(s) 770, 920, 1433
HpyF10VI GCNNNNNNNGC 2 cut(s) 497, 1142
HpyF3I CTNAG 9 cut(s) 129, 222, 306, 537, 777, 834, 934, 945, 1236
HpySE526I ACGT 1 cut(s) 713
Hsp92I GRCGYC 1 cut(s) 713
Hsp92II CATG 2 cut(s) 1270, 1417
HspAI GCGC 1 cut(s) 528
Kpn2I TCCGGA 1 cut(s) 598
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
LmnI GCTCC 4 cut(s) 343, 601, 629, 1258
Lsp1109I GCAGC 2 cut(s) 1123, 1154
LweI GCATC 2 cut(s) 478, 907
MaeI CTAG 2 cut(s) 144, 297
MaeII ACGT 1 cut(s) 713
MaeIII GTNAC 5 cut(s) 331, 558, 991, 1120, 1292
MalI GATC 7 cut(s) 28, 43, 218, 227, 257, 311, 804
MboI GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
MboII GAAGA 6 cut(s) 54, 395, 710, 983, 1095, 1382
MfeI CAATTG 1 cut(s) 1428
MflI RGATCY 2 cut(s) 309, 802
MhlI GDGCHC 1 cut(s) 1014
MlyI GAGTC 4 cut(s) 25, 926, 950, 972
MmeI TCCRAC 1 cut(s) 430
MroI TCCGGA 1 cut(s) 598
MroXI GAANNNNTTC 1 cut(s) 401
MseI TTAA 7 cut(s) 177, 417, 465, 674, 785, 858, 1341
MslI CAYNNNNRTG 2 cut(s) 267, 278
MspA1I CMGCKG 1 cut(s) 412
MspCI CTTAAG 2 cut(s) 464, 1340
MspI CCGG 2 cut(s) 599, 1423
MspR9I CCNGG 2 cut(s) 760, 1028
MunI CAATTG 1 cut(s) 1428
Mva1269I GAATGC 2 cut(s) 895, 1006
MvaI CCWGG 2 cut(s) 760, 1028
MwoI GCNNNNNNNGC 2 cut(s) 497, 1142
NcoI CCATGG 1 cut(s) 1413
NdeII GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
NheI GCTAGC 1 cut(s) 296
NlaIII CATG 2 cut(s) 1270, 1417
NlaIV GGNNCC 3 cut(s) 804, 1387, 1411
NmuCI GTSAC 2 cut(s) 331, 1292
NspV TTCGAA 1 cut(s) 1053
PasI CCCWGGG 1 cut(s) 1027
PcsI WCGNNNNNNNCGW 1 cut(s) 1084
PctI GAATGC 2 cut(s) 895, 1006
PdmI GAANNNNTTC 1 cut(s) 401
PfeI GAWTC 2 cut(s) 701, 949
PkrI GCNGC 4 cut(s) 1138, 1141, 1144, 1211
Ple19I CGATCG 1 cut(s) 29
PleI GAGTC 4 cut(s) 25, 926, 949, 972
PpsI GAGTC 4 cut(s) 25, 926, 949, 972
PshBI ATTAAT 1 cut(s) 417
Psp124BI GAGCTC 1 cut(s) 1014
Psp6I CCWGG 2 cut(s) 758, 1026
PspGI CCWGG 2 cut(s) 758, 1026
PspN4I GGNNCC 3 cut(s) 804, 1387, 1411
PsuI RGATCY 2 cut(s) 309, 802
PvuI CGATCG 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 412
RsaI GTAC 1 cut(s) 1402
RsaNI GTAC 1 cut(s) 1401
RseI CAYNNNNRTG 2 cut(s) 267, 278
SacI GAGCTC 1 cut(s) 1014
SalI GTCGAC 1 cut(s) 1441
SaqAI TTAA 7 cut(s) 177, 417, 465, 674, 785, 858, 1341
SatI GCNGC 4 cut(s) 1137, 1140, 1143, 1210
Sau3AI GATC 7 cut(s) 26, 41, 216, 225, 255, 309, 802
SchI GAGTC 4 cut(s) 25, 926, 950, 972
ScrFI CCNGG 2 cut(s) 760, 1028
SduI GDGCHC 1 cut(s) 1014
SfaNI GCATC 2 cut(s) 478, 907
SfuI TTCGAA 1 cut(s) 1053
SmiMI CAYNNNNRTG 2 cut(s) 267, 278
SmlI CTYRAG 2 cut(s) 464, 1340
SmoI CTYRAG 2 cut(s) 464, 1340
SsiI CCGC 3 cut(s) 422, 1139, 1210
SspMI CTAG 2 cut(s) 144, 297
SstI GAGCTC 1 cut(s) 1014
StyD4I CCNGG 2 cut(s) 758, 1026
StyI CCWWGG 1 cut(s) 1413
TaaI ACNGT 1 cut(s) 1440
TaiI ACGT 1 cut(s) 716
TauI GCSGC 2 cut(s) 1142, 1212
TfiI GAWTC 2 cut(s) 701, 949
Tru1I TTAA 7 cut(s) 177, 417, 465, 674, 785, 858, 1341
Tru9I TTAA 7 cut(s) 177, 417, 465, 674, 785, 858, 1341
TscAI CASTG 2 cut(s) 340, 1240
TseFI GTSAC 2 cut(s) 331, 1292
TseI GCWGC 2 cut(s) 1136, 1142
Tsp45I GTSAC 2 cut(s) 331, 1292
TspDTI ATGAA 3 cut(s) 263, 1013, 1199
TspRI CASTG 2 cut(s) 340, 1240
Vha464I CTTAAG 2 cut(s) 464, 1340
VspI ATTAAT 1 cut(s) 417
XapI RAATTY 8 cut(s) 137, 326, 357, 475, 743, 795, 881, 1304
XmiI GTMKAC 1 cut(s) 1442
XmnI GAANNNNTTC 1 cut(s) 401
XspI CTAG 2 cut(s) 144, 297
ZraI GACGTC 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.