Rw5G010020

CBL-interacting serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
11003571 .. 11009692
6122 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G010020.1

Sequence Viewer

Length: 1410 bp
ATGGCGACGAGGGCGGGCAGTACTTCGAGTCGGACTCGGGTCGGGAGGTACGATCTGGGTCGGACCCTAGGGGAGGGCAATTTCGCCAAGGTCAAGTTTGCGAGGAACATCGAGACCGGTGAGAATTTCGCTATTAAGATTCTGGACAAAGAGAAGGTCCTCAAGCACAAGATGATCGGCCAGATCAAACGAGAAATATCAACGATGAAGTTAATTAGACATCCCAATGTAATCCGTATGTATGAGGTGATGGCTAGCAAGACAAAAATATACATCGTTTTGGAGTTTGTGACTGGTGGAGAACTATTTGACAAAATTGCAAGTAAAGGAAGATTGAAAGAAGATGAAGCAAGGAAGTATTTTCAGCAGCTTATAAATGCAGTGGATTACTGCCATAGCAGAGGTGTTTTCCATAGAGACCTGAAGCCCGAGAATTTGCTGCTGGATGCTAATGGAGTGCTTAAAGTTTCAGATTTTGGGCTCAGTGCGCTGCCTCAGCAAGTTCGAGAAGATGGATTACTTCACACAACATGTGGGACACCAAATTATGTTGCCCCTGAGGTCATCAACAACAAAGGGTATGATGGAGCAAAGGCTGATCTATGGTCTTGTGGTGTGATTCTTTATGTCTTGATGGCTGGCTATCTGCCTTTTGAAGATTCCAATCTCATGTCATTATATAAAAAGATATTCAAGGCTGAGTTCTCATGTCCTCCATGGTTCTCCTCAAGTGCAAAGAAGCTAATTAAGAGAATCTTGGACCCTAACCCCTTGACACGAATTACAATTGCTGAGGTCATTGAGAATGAGTGGTTCAAGAAAGGGTATAAAGCACCTAATTTTGAACAAGTTGATGTTAGTCTCGATGATGTGGATGCGATATTCAATGATTCAGGGGATACCCAGAACCTTGTAGTTGAGAAGCGAGAGGAAAGACATGTGCCTGTTACCATGAATGCCTTTGAGCTTATCTCTACATCTCAGGGCCTGAATCTCAATAGTCTTTTTGAGAAACAGATGGAACTTGTTAAACGAGAAACAAGATTCACATCCAAACGTCCTGCTAATGAGATTATTTCTAAAATTGAGGAAGCTGCAGCACCATTGGGTTTTGGTGTGAAGAAAAATAATTTTAAGTTGAAGCTTCAAGGTGAAAAAACTGGACGTAAAGGTCATCTATCTGTTGCAACAGAGATTTTTGAGGTGGCCCCTTCACTCTACATGGTTGAAGTCCGCAAGTCAGGGGGAGATACTCTGGAATTTCACAATTTCTACAAGAACCTTTCCACGGGGCTGAAGGATATTGTCTGGAAGTCGGGAGATGAGTCAAGGAGGGAAGCAGAACTTGGTTCTGGTTCTGGTACTGGTGCTGGTGCTGGTGCAGGTGCAGGTGCGGTGCCATCTACATGA

Protein Analysis

469

Amino Acids

52.27

Weight (kDa)

9.07

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 17 - 272 4.6e-77 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 19 - 268 5e-39 Protein tyrosine and serine/threonine kinase
Kinase-like PF14531 109 - 222 2.5e-06 Kinase-like
NAF PF03822 315 - 375 9.5e-23 NAF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 374
AarI CACCTGC 2 cut(s) 1373, 1379
AasI GACNNNNNNGTC 1 cut(s) 1170
Acc36I ACCTGC 2 cut(s) 1373, 1379
AccB1I GGYRCC 1 cut(s) 1396
AciI CCGC 3 cut(s) 14, 1234, 1394
AcoI YGGCCR 1 cut(s) 178
AcsI RAATTY 3 cut(s) 124, 433, 1259
AcuI CTGAAG 2 cut(s) 443, 1316
AfaI GTAC 3 cut(s) 22, 50, 1363
AfiI CCNNNNNNNGG 2 cut(s) 73, 1288
AflIII ACRYGT 2 cut(s) 530, 937
AgeI ACCGGT 1 cut(s) 116
AgsI TTSAA 9 cut(s) 337, 656, 694, 817, 845, 886, 1141, 1148, 1229
AjuI GAANNNNNNNTTGG 2 cut(s) 1329, 1361
AluBI AGCT 5 cut(s) 370, 742, 967, 1094, 1144
AluI AGCT 5 cut(s) 370, 742, 967, 1094, 1144
Alw26I GTCTC 3 cut(s) 107, 411, 866
AlwNI CAGNNNCTG 1 cut(s) 988
Ama87I CYCGRG 2 cut(s) 36, 428
AoxI GGCC 3 cut(s) 178, 985, 1206
ApeKI GCWGC 5 cut(s) 367, 439, 490, 1094, 1097
ApoI RAATTY 3 cut(s) 124, 433, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 141, 173
AsiGI ACCGGT 1 cut(s) 116
AspA2I CCTAGG 1 cut(s) 67
AspLEI GCGC 1 cut(s) 490
AspS9I GGNCC 5 cut(s) 63, 157, 760, 985, 1207
AsuHPI GGTGA 3 cut(s) 131, 259, 1163
AsuNHI GCTAGC 1 cut(s) 254
AvaI CYCGRG 2 cut(s) 36, 428
AvaII GGWCC 3 cut(s) 63, 157, 760
AvrII CCTAGG 1 cut(s) 67
AxyI CCTNAGG 1 cut(s) 558
BanI GGYRCC 1 cut(s) 1396
BanII GRGCYC 1 cut(s) 483
BarI GAAGNNNNNNTAC 2 cut(s) 501, 533
BbvCI CCTCAGC 2 cut(s) 495, 792
BbvI GCAGC 5 cut(s) 379, 426, 477, 1081, 1109
BccI CCATC 6 cut(s) 244, 506, 578, 628, 1012, 1408
BciVI GTATCC 1 cut(s) 892
BcoDI GTCTC 3 cut(s) 107, 411, 866
BfaI CTAG 2 cut(s) 68, 255
BfmI CTRYAG 1 cut(s) 1095
BfuAI ACCTGC 2 cut(s) 1373, 1379
BfuI GTATCC 1 cut(s) 892
BisI GCNGC 5 cut(s) 368, 440, 491, 1095, 1098
BlnI CCTAGG 1 cut(s) 67
BlsI GCNGC 5 cut(s) 369, 441, 492, 1096, 1099
BmcAI AGTACT 1 cut(s) 22
Bme18I GGWCC 3 cut(s) 63, 157, 760
BmeT110I CYCGRG 2 cut(s) 36, 428
BmgT120I GGNCC 5 cut(s) 63, 157, 760, 985, 1207
BmiI GGNNCC 4 cut(s) 65, 762, 1209, 1398
BmsI GCATC 2 cut(s) 436, 865
BmtI GCTAGC 1 cut(s) 258
BoxI GACNNNNGTC 1 cut(s) 38
BplI GAGNNNNNCTC 4 cut(s) 19, 51, 956, 988
Bpu10I CCTNAGC 2 cut(s) 495, 792
BpuEI CTTGAG 2 cut(s) 146, 712
BsaBI GATNNNNATC 2 cut(s) 663, 1048
BsaI GGTCTC 2 cut(s) 107, 411
BsaJI CCNNGG 4 cut(s) 67, 87, 716, 1287
BsaWI WCCGGW 1 cut(s) 116
Bsc4I CCNNNNNNNGG 2 cut(s) 73, 1288
Bse118I RCCGGY 1 cut(s) 116
Bse1I ACTGG 3 cut(s) 298, 1165, 1369
Bse21I CCTNAGG 1 cut(s) 558
Bse8I GATNNNNATC 2 cut(s) 663, 1048
BseDI CCNNGG 4 cut(s) 67, 87, 716, 1287
BseGI GGATG 4 cut(s) 220, 451, 880, 1049
BseJI GATNNNNATC 2 cut(s) 663, 1048
BseLI CCNNNNNNNGG 2 cut(s) 73, 1288
BseMII CTCAG 6 cut(s) 496, 509, 549, 690, 783, 995
BseNI ACTGG 3 cut(s) 298, 1165, 1369
BseRI GAGGAG 1 cut(s) 715
BseXI GCAGC 5 cut(s) 379, 426, 477, 1081, 1109
BsgI GTGCAG 2 cut(s) 1401, 1407
BshFI GGCC 3 cut(s) 180, 987, 1208
BshNI GGYRCC 1 cut(s) 1396
BshTI ACCGGT 1 cut(s) 116
BsiHKCI CYCGRG 2 cut(s) 36, 428
BsiSI CCGG 1 cut(s) 117
BslFI GGGAC 1 cut(s) 550
BslI CCNNNNNNNGG 2 cut(s) 73, 1288
BsmAI GTCTC 3 cut(s) 107, 411, 866
BsmFI GGGAC 1 cut(s) 550
BsmI GAATGC 1 cut(s) 961
BsnI GGCC 3 cut(s) 180, 987, 1208
Bso31I GGTCTC 2 cut(s) 107, 411
BsoBI CYCGRG 2 cut(s) 36, 428
Bsp1286I GDGCHC 1 cut(s) 483
Bsp143I GATC 4 cut(s) 52, 174, 183, 598
Bsp19I CCATGG 1 cut(s) 716
BspACI CCGC 3 cut(s) 14, 1234, 1394
BspANI GGCC 3 cut(s) 180, 987, 1208
BspCNI CTCAG 6 cut(s) 495, 508, 550, 691, 784, 994
BspLI GGNNCC 4 cut(s) 65, 762, 1209, 1398
BspMAI CTGCAG 1 cut(s) 1099
BspMI ACCTGC 2 cut(s) 1373, 1379
BspOI GCTAGC 1 cut(s) 258
BspT107I GGYRCC 1 cut(s) 1396
BspTNI GGTCTC 2 cut(s) 107, 411
BsrFI RCCGGY 1 cut(s) 116
BsrI ACTGG 3 cut(s) 298, 1165, 1369
BssAI RCCGGY 1 cut(s) 116
BssECI CCNNGG 4 cut(s) 67, 87, 716, 1287
BssMI GATC 4 cut(s) 52, 174, 183, 598
BssT1I CCWWGG 3 cut(s) 67, 87, 716
BstC8I GCNNGC 3 cut(s) 16, 256, 640
BstDEI CTNAG 6 cut(s) 482, 495, 558, 699, 792, 981
BstDSI CCRYGG 2 cut(s) 716, 1287
BstENI CCTNNNNNAGG 1 cut(s) 71
BstF5I GGATG 4 cut(s) 220, 451, 880, 1049
BstHHI GCGC 1 cut(s) 490
BstKTI GATC 4 cut(s) 55, 177, 186, 601
BstMAI GTCTC 3 cut(s) 107, 411, 866
BstMBI GATC 4 cut(s) 52, 174, 183, 598
BstMWI GCNNNNNNNGC 3 cut(s) 11, 487, 496
BstNSI RCATGY 2 cut(s) 534, 941
BstPAI GACNNNNGTC 1 cut(s) 38
BstSFI CTRYAG 1 cut(s) 1095
BstV1I GCAGC 5 cut(s) 379, 426, 477, 1081, 1109
Bsu36I CCTNAGG 1 cut(s) 558
BsuI GTATCC 1 cut(s) 892
BsuRI GGCC 3 cut(s) 180, 987, 1208
BtgI CCRYGG 2 cut(s) 716, 1287
BtsCI GGATG 4 cut(s) 220, 451, 880, 1049
BtsI GCAGTG 1 cut(s) 387
BtsIMutI CAGTG 2 cut(s) 387, 490
BveI ACCTGC 2 cut(s) 1373, 1379
Cac8I GCNNGC 3 cut(s) 16, 256, 640
CaiI CAGNNNCTG 1 cut(s) 988
CfoI GCGC 1 cut(s) 490
Cfr10I RCCGGY 1 cut(s) 116
Cfr13I GGNCC 5 cut(s) 63, 157, 760, 985, 1207
Csp6I GTAC 3 cut(s) 21, 49, 1362
CspAI ACCGGT 1 cut(s) 116
CviAII CATG 8 cut(s) 531, 670, 708, 717, 938, 952, 1222, 1407
CviQI GTAC 3 cut(s) 21, 49, 1362
DdeI CTNAG 6 cut(s) 482, 495, 558, 699, 792, 981
DpnI GATC 4 cut(s) 54, 176, 185, 600
DpnII GATC 4 cut(s) 52, 174, 183, 598
DrdI GACNNNNNNGTC 1 cut(s) 1170
DseDI GACNNNNNNGTC 1 cut(s) 1170
EaeI YGGCCR 1 cut(s) 178
Eco130I CCWWGG 3 cut(s) 67, 87, 716
Eco24I GRGCYC 1 cut(s) 483
Eco31I GGTCTC 2 cut(s) 107, 411
Eco47I GGWCC 3 cut(s) 63, 157, 760
Eco57I CTGAAG 2 cut(s) 443, 1316
Eco81I CCTNAGG 1 cut(s) 558
Eco88I CYCGRG 2 cut(s) 36, 428
EcoNI CCTNNNNNAGG 1 cut(s) 71
EcoO109I RGGNCCY 2 cut(s) 157, 985
EcoT14I CCWWGG 3 cut(s) 67, 87, 716
EcoT38I GRGCYC 1 cut(s) 483
ErhI CCWWGG 3 cut(s) 67, 87, 716
FaeI CATG 8 cut(s) 534, 673, 711, 720, 941, 955, 1225, 1410
FalI AAGNNNNNCTT 4 cut(s) 740, 772, 1329, 1361
FaqI GGGAC 1 cut(s) 550
FatI CATG 8 cut(s) 530, 669, 707, 716, 937, 951, 1221, 1406
FauI CCCGC 1 cut(s) 7
Fnu4HI GCNGC 5 cut(s) 368, 440, 491, 1095, 1098
FokI GGATG 4 cut(s) 207, 458, 887, 1036
FriOI GRGCYC 1 cut(s) 483
Fsp4HI GCNGC 5 cut(s) 368, 440, 491, 1095, 1098
FspBI CTAG 2 cut(s) 68, 255
GlaI GCGC 1 cut(s) 489
GluI GCNGC 5 cut(s) 368, 440, 491, 1095, 1098
HaeIII GGCC 3 cut(s) 180, 987, 1208
HapII CCGG 1 cut(s) 117
HhaI GCGC 1 cut(s) 490
Hin1II CATG 8 cut(s) 534, 673, 711, 720, 941, 955, 1225, 1410
Hin6I GCGC 1 cut(s) 488
HinP1I GCGC 1 cut(s) 488
HindIII AAGCTT 1 cut(s) 1142
HpaII CCGG 1 cut(s) 117
HphI GGTGA 3 cut(s) 131, 259, 1163
Hpy188I TCNGA 3 cut(s) 33, 63, 472
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 3 cut(s) 148, 1221, 1291
HpyCH4IV ACGT 2 cut(s) 1057, 1165
HpyCH4V TGCA 7 cut(s) 320, 380, 734, 1097, 1187, 1382, 1388
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 487, 496
HpyF3I CTNAG 6 cut(s) 482, 495, 558, 699, 792, 981
HpySE526I ACGT 2 cut(s) 1057, 1165
Hsp92II CATG 8 cut(s) 534, 673, 711, 720, 941, 955, 1225, 1410
HspAI GCGC 1 cut(s) 488
Kzo9I GATC 4 cut(s) 52, 174, 183, 598
LmnI GCTCC 1 cut(s) 587
Lsp1109I GCAGC 5 cut(s) 379, 426, 477, 1081, 1109
LweI GCATC 2 cut(s) 436, 865
MaeI CTAG 2 cut(s) 68, 255
MaeII ACGT 2 cut(s) 1057, 1165
MaeIII GTNAC 2 cut(s) 289, 946
MalI GATC 4 cut(s) 54, 176, 185, 600
MboI GATC 4 cut(s) 52, 174, 183, 598
MboII GAAGA 5 cut(s) 342, 353, 521, 668, 1132
MfeI CAATTG 1 cut(s) 786
MhlI GDGCHC 1 cut(s) 483
MlyI GAGTC 3 cut(s) 28, 37, 1334
MmeI TCCRAC 2 cut(s) 11, 41
MseI TTAA 6 cut(s) 135, 212, 462, 747, 1029, 1134
MslI CAYNNNNRTG 2 cut(s) 225, 1405
MspI CCGG 1 cut(s) 117
MunI CAATTG 1 cut(s) 786
Mva1269I GAATGC 1 cut(s) 961
MwoI GCNNNNNNNGC 3 cut(s) 11, 487, 496
NcoI CCATGG 1 cut(s) 716
NdeII GATC 4 cut(s) 52, 174, 183, 598
NheI GCTAGC 1 cut(s) 254
NlaIII CATG 8 cut(s) 534, 673, 711, 720, 941, 955, 1225, 1410
NlaIV GGNNCC 4 cut(s) 65, 762, 1209, 1398
NmuCI GTSAC 1 cut(s) 289
NspI RCATGY 2 cut(s) 534, 941
PaqCI CACCTGC 2 cut(s) 1373, 1379
PciI ACATGT 2 cut(s) 530, 937
PcsI WCGNNNNNNNCGW 1 cut(s) 48
PctI GAATGC 1 cut(s) 961
PfeI GAWTC 7 cut(s) 139, 619, 659, 753, 890, 991, 1044
PinAI ACCGGT 1 cut(s) 116
PkrI GCNGC 5 cut(s) 369, 441, 492, 1096, 1099
PleI GAGTC 3 cut(s) 28, 36, 1333
PpsI GAGTC 3 cut(s) 28, 36, 1333
PpuMI RGGWCCY 1 cut(s) 157
PscI ACATGT 2 cut(s) 530, 937
PshAI GACNNNNGTC 1 cut(s) 38
PsiI TTATAA 1 cut(s) 374
Psp5II RGGWCCY 1 cut(s) 157
PspN4I GGNNCC 4 cut(s) 65, 762, 1209, 1398
PspPI GGNCC 5 cut(s) 63, 157, 760, 985, 1207
PspPPI RGGWCCY 1 cut(s) 157
PstI CTGCAG 1 cut(s) 1099
PstNI CAGNNNCTG 1 cut(s) 988
RsaI GTAC 3 cut(s) 22, 50, 1363
RsaNI GTAC 3 cut(s) 21, 49, 1362
RseI CAYNNNNRTG 2 cut(s) 225, 1405
SaqAI TTAA 6 cut(s) 135, 212, 462, 747, 1029, 1134
SatI GCNGC 5 cut(s) 368, 440, 491, 1095, 1098
Sau3AI GATC 4 cut(s) 52, 174, 183, 598
Sau96I GGNCC 5 cut(s) 63, 157, 760, 985, 1207
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 3 cut(s) 28, 37, 1334
SduI GDGCHC 1 cut(s) 483
SfaNI GCATC 2 cut(s) 436, 865
SfcI CTRYAG 1 cut(s) 1095
SinI GGWCC 3 cut(s) 63, 157, 760
SmiMI CAYNNNNRTG 2 cut(s) 225, 1405
SmlI CTYRAG 2 cut(s) 161, 727
SmoI CTYRAG 2 cut(s) 161, 727
SsiI CCGC 3 cut(s) 14, 1234, 1394
SspMI CTAG 2 cut(s) 68, 255
StyI CCWWGG 3 cut(s) 67, 87, 716
TaiI ACGT 2 cut(s) 1060, 1168
TaqI TCGA 4 cut(s) 26, 111, 505, 864
TatI WGTACW 1 cut(s) 20
TfiI GAWTC 7 cut(s) 139, 619, 659, 753, 890, 991, 1044
Tru1I TTAA 6 cut(s) 135, 212, 462, 747, 1029, 1134
Tru9I TTAA 6 cut(s) 135, 212, 462, 747, 1029, 1134
TscAI CASTG 2 cut(s) 387, 490
TseFI GTSAC 1 cut(s) 289
TseI GCWGC 5 cut(s) 367, 439, 490, 1094, 1097
Tsp45I GTSAC 1 cut(s) 289
TspDTI ATGAA 3 cut(s) 221, 360, 968
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 2 cut(s) 387, 490
VpaK11BI GGWCC 3 cut(s) 63, 157, 760
XagI CCTNNNNNAGG 1 cut(s) 71
XapI RAATTY 3 cut(s) 124, 433, 1259
XceI RCATGY 2 cut(s) 534, 941
XmaJI CCTAGG 1 cut(s) 67
XspI CTAG 2 cut(s) 68, 255
ZrmI AGTACT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.