Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0012869

Physical Location & Seq

Genomic Coordinates Reverse (-)

11534607 .. 11536437

Gene Structure 1831 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G32070.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 774 bp

ATGCTACTAATCCCAATTTCTTCTTCTTCGTCTTCGTCTATCCCTCCTCCTAATTCATATCCATCGAATCATCACTCTCTGTTTTTCTCCAATCTCACATTCCCAATTCAACATGGAAGTAGAAAGTTGAAGACTTTGCGACTCAGAGCCAATTTCTGGGAGTCAATCCGATCTGGGTTTGTGAAGAATAATAATAGTACGCAACTTGTGGAACCACCTTCTATAGTCAATGATGAAGAAGAAGAGACTGAGCCATTGTTACCTGTGGAATTTACTTTAGTTGAGAGAAATCTTGAAGATGGTTTAGTTGAAGAGATCATATTTTCTTCTGGTGGTGAGATTGATGTTTATGATCTTCAAGGTCTTTGTGATAAGGTGGGATGGCCAAGGAGACCGTTAGTGAAACTAGCTGCTGCTTTGAAGAATAGTTATATGGTTGCTACTTTGCATTCTGTAATGAAGTCATCATCAGATTCAGATTCATCAGAAGGCGGGGATGGGGAGAAGCAGCAGGAGAAGAAGCTTATTGGTATGGCACGTGCGACGTCGGATCATGCCTTTAATGCTACAATTTGGGATGTTCTTGTTGATCCTGAATATCAGGGTCAAGGGCTAGGTAAAGCTCTTGTTGAAAAACTTGTAAGGGCTCTTCTTCAAAGAGATATTGGTAACATATCTCTGTTTGCAGATAGTCAAGTTGTGGATTTCTATCAGAACTTGGGGTTTGAGGCTGATCCAGAAGGCATCAAAGGCATGTTTTGGTACCCAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004059 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006725 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0010817 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0018130 GO:0019438 GO:0030186 GO:0030187 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00380 map00380

Pfam Domains

Protein Families

Acetyltransf_1 Acetyltransf_10

Protein Analysis

257

Amino Acids

28.56

Weight (kDa)

4.96

Isoelectric Point (pI)

50.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	171 - 242	5.6e-14	Acetyltransferase (GNAT) family
Acetyltransf_10	PF13673	171 - 245	1.3e-11	Acetyltransferase (GNAT) domain
Acetyltransf_7	PF13508	172 - 243	2.2e-12	Acetyltransferase (GNAT) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32070 AT1G32070 AT1G32070
fragaria_vesca	FvH4_6g09480
malus_domestica	MD04G1177200.v1.1 MD04G1177300.v1.1 MD12G1192400.v1.1
prunus_persica	Prupe.6G296900_v2.0.a1 Prupe.6G297300_v2.0.a1
pyrus_communis	pycom12g17940
rosa_chinensis	RchiOBHm_Chr3g0460061
rosa_laevigata	RLG00000025047
rosa_multiflora	Rmu_sc0021757.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419880
rosa_samantha	Rh3AG097600 Rh3BG100700 Rh3CG102800
rosa_wichuraiana	Rw3G008230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	548
Acc65I	GGTACC	1 cut(s)	762
AccB1I	GGYRCC	1 cut(s)	762
AccB7I	CCANNNNNTGG	1 cut(s)	156
AciI	CCGC	1 cut(s)	492
AclWI	GGATC	3 cut(s)	558, 584, 728
AcoI	YGGCCR	1 cut(s)	383
AcsI	RAATTY	1 cut(s)	269
AcvI	CACGTG	1 cut(s)	539
AcyI	GRCGYC	1 cut(s)	545
AfaI	GTAC	2 cut(s)	199, 764
AfiI	CCNNNNNNNGG	1 cut(s)	156
AgsI	TTSAA	8 cut(s)	110, 130, 296, 311, 359, 421, 632, 656
AjuI	GAANNNNNNNTTGG	4 cut(s)	7, 39, 83, 115
AluBI	AGCT	3 cut(s)	410, 523, 623
AluI	AGCT	3 cut(s)	410, 523, 623
Alw26I	GTCTC	2 cut(s)	239, 385
AlwI	GGATC	3 cut(s)	558, 584, 728
AoxI	GGCC	1 cut(s)	383
ApeKI	GCWGC	3 cut(s)	410, 413, 508
ApoI	RAATTY	1 cut(s)	269
Asp718I	GGTACC	1 cut(s)	762
AsuHPI	GGTGA	1 cut(s)	347
BalI	TGGCCA	1 cut(s)	385
BanI	GGYRCC	1 cut(s)	762
BanII	GRGCYC	1 cut(s)	649
BarI	GAAGNNNNNNTAC	2 cut(s)	633, 665
BbrPI	CACGTG	1 cut(s)	539
BbsI	GAAGAC	2 cut(s)	24, 137
BbvI	GCAGC	3 cut(s)	397, 400, 520
BccI	CCATC	4 cut(s)	70, 293, 375, 491
BcoDI	GTCTC	2 cut(s)	239, 385
BfaI	CTAG	2 cut(s)	407, 614
BfmI	CTRYAG	1 cut(s)	222
BisI	GCNGC	3 cut(s)	411, 414, 509
BlsI	GCNGC	3 cut(s)	412, 415, 510
BmiI	GGNNCC	2 cut(s)	213, 764
BmsI	GCATC	1 cut(s)	753
BpiI	GAAGAC	2 cut(s)	24, 137
BsaAI	YACGTR	1 cut(s)	539
BsaBI	GATNNNNATC	1 cut(s)	708
BsaHI	GRCGYC	1 cut(s)	545
BsaI	GGTCTC	1 cut(s)	385
BsaJI	CCNNGG	1 cut(s)	386
Bsc4I	CCNNNNNNNGG	1 cut(s)	156
Bse8I	GATNNNNATC	1 cut(s)	708
BseDI	CCNNGG	1 cut(s)	386
BseGI	GGATG	3 cut(s)	386, 502, 583
BseJI	GATNNNNATC	1 cut(s)	708
BseLI	CCNNNNNNNGG	1 cut(s)	156
BseMII	CTCAG	2 cut(s)	157, 240
BseRI	GAGGAG	1 cut(s)	36
BseXI	GCAGC	3 cut(s)	397, 400, 520
BshFI	GGCC	1 cut(s)	385
BshNI	GGYRCC	1 cut(s)	762
BslI	CCNNNNNNNGG	1 cut(s)	156
BsmAI	GTCTC	2 cut(s)	239, 385
BsmI	GAATGC	1 cut(s)	448
BsnI	GGCC	1 cut(s)	385
Bso31I	GGTCTC	1 cut(s)	385
Bsp1286I	GDGCHC	1 cut(s)	649
Bsp143I	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
BspACI	CCGC	1 cut(s)	492
BspANI	GGCC	1 cut(s)	385
BspCNI	CTCAG	2 cut(s)	156, 241
BspLI	GGNNCC	2 cut(s)	213, 764
BspPI	GGATC	3 cut(s)	558, 584, 728
BspQI	GCTCTTC	1 cut(s)	654
BspT107I	GGYRCC	1 cut(s)	762
BspTNI	GGTCTC	1 cut(s)	385
BssECI	CCNNGG	1 cut(s)	386
BssMI	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
BssNI	GRCGYC	1 cut(s)	545
BssT1I	CCWWGG	1 cut(s)	386
Bst4CI	ACNGT	1 cut(s)	396
Bst6I	CTCTTC	3 cut(s)	237, 306, 654
BstACI	GRCGYC	1 cut(s)	545
BstBAI	YACGTR	1 cut(s)	539
BstDEI	CTNAG	2 cut(s)	143, 249
BstF5I	GGATG	3 cut(s)	386, 502, 583
BstKTI	GATC	6 cut(s)	173, 318, 355, 553, 592, 736
BstMAI	GTCTC	2 cut(s)	239, 385
BstMBI	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
BstMWI	GCNNNNNNNGC	2 cut(s)	563, 750
BstNSI	RCATGY	1 cut(s)	757
BstSFI	CTRYAG	1 cut(s)	222
BstV1I	GCAGC	3 cut(s)	397, 400, 520
BstV2I	GAAGAC	2 cut(s)	24, 137
BsuRI	GGCC	1 cut(s)	385
BtsCI	GGATG	3 cut(s)	386, 502, 583
Csp6I	GTAC	2 cut(s)	198, 763
CviAII	CATG	3 cut(s)	113, 554, 754
CviJI	RGCY	9 cut(s)	149, 253, 385, 410, 523, 613, 623, 647, 731
CviKI_1	RGCY	9 cut(s)	149, 253, 385, 410, 523, 613, 623, 647, 731
CviQI	GTAC	2 cut(s)	198, 763
DdeI	CTNAG	2 cut(s)	143, 249
DpnI	GATC	6 cut(s)	172, 317, 354, 552, 591, 735
DpnII	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
EaeI	YGGCCR	1 cut(s)	383
Eam1104I	CTCTTC	3 cut(s)	237, 306, 654
EarI	CTCTTC	3 cut(s)	237, 306, 654
Eco130I	CCWWGG	1 cut(s)	386
Eco24I	GRGCYC	1 cut(s)	649
Eco31I	GGTCTC	1 cut(s)	385
Eco72I	CACGTG	1 cut(s)	539
EcoT14I	CCWWGG	1 cut(s)	386
EcoT38I	GRGCYC	1 cut(s)	649
ErhI	CCWWGG	1 cut(s)	386
FaeI	CATG	3 cut(s)	116, 557, 757
FatI	CATG	3 cut(s)	112, 553, 753
FauI	CCCGC	1 cut(s)	485
Fnu4HI	GCNGC	3 cut(s)	411, 414, 509
FokI	GGATG	3 cut(s)	393, 509, 590
FriOI	GRGCYC	1 cut(s)	649
Fsp4HI	GCNGC	3 cut(s)	411, 414, 509
FspBI	CTAG	2 cut(s)	407, 614
GluI	GCNGC	3 cut(s)	411, 414, 509
HaeIII	GGCC	1 cut(s)	385
Hin1I	GRCGYC	1 cut(s)	545
Hin1II	CATG	3 cut(s)	116, 557, 757
HindIII	AAGCTT	1 cut(s)	521
HinfI	GANTC	5 cut(s)	67, 141, 161, 473, 479
HphI	GGTGA	1 cut(s)	347
Hpy188I	TCNGA	7 cut(s)	146, 170, 472, 478, 487, 550, 714
Hpy188III	TCNNGA	3 cut(s)	293, 593, 737
Hpy99I	CGWCG	2 cut(s)	547, 550
HpyAV	CCTTC	3 cut(s)	228, 482, 734
HpyCH4III	ACNGT	1 cut(s)	396
HpyCH4IV	ACGT	2 cut(s)	538, 545
HpyCH4V	TGCA	2 cut(s)	448, 686
HpyF10VI	GCNNNNNNNGC	2 cut(s)	563, 750
HpyF3I	CTNAG	2 cut(s)	143, 249
HpySE526I	ACGT	2 cut(s)	538, 545
Hsp92I	GRCGYC	1 cut(s)	545
Hsp92II	CATG	3 cut(s)	116, 557, 757
KpnI	GGTACC	1 cut(s)	766
Kzo9I	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
LguI	GCTCTTC	1 cut(s)	654
LpnPI	CCDG	8 cut(s)	142, 159, 276, 315, 497, 587, 606, 750
Lsp1109I	GCAGC	3 cut(s)	397, 400, 520
LweI	GCATC	1 cut(s)	753
MaeI	CTAG	2 cut(s)	407, 614
MaeII	ACGT	2 cut(s)	538, 545
MaeIII	GTNAC	2 cut(s)	258, 668
MalI	GATC	6 cut(s)	172, 317, 354, 552, 591, 735
MboI	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
MhlI	GDGCHC	1 cut(s)	649
MlsI	TGGCCA	1 cut(s)	385
MluCI	AATT	6 cut(s)	15, 52, 105, 151, 269, 570
MluNI	TGGCCA	1 cut(s)	385
MlyI	GAGTC	2 cut(s)	135, 170
MmeI	TCCRAC	1 cut(s)	528
MnlI	CCTC	3 cut(s)	54, 57, 721
Mox20I	TGGCCA	1 cut(s)	385
MscI	TGGCCA	1 cut(s)	385
MseI	TTAA	1 cut(s)	561
Msp20I	TGGCCA	1 cut(s)	385
Mva1269I	GAATGC	1 cut(s)	448
MwoI	GCNNNNNNNGC	2 cut(s)	563, 750
NdeII	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
NlaIII	CATG	3 cut(s)	116, 557, 757
NlaIV	GGNNCC	2 cut(s)	213, 764
NspI	RCATGY	1 cut(s)	757
PciSI	GCTCTTC	1 cut(s)	654
PctI	GAATGC	1 cut(s)	448
PfeI	GAWTC	3 cut(s)	67, 473, 479
PflMI	CCANNNNNTGG	1 cut(s)	156
PkrI	GCNGC	3 cut(s)	412, 415, 510
PleI	GAGTC	2 cut(s)	135, 169
PmaCI	CACGTG	1 cut(s)	539
PmlI	CACGTG	1 cut(s)	539
PpsI	GAGTC	2 cut(s)	135, 169
Ppu21I	YACGTR	1 cut(s)	539
PspCI	CACGTG	1 cut(s)	539
PspN4I	GGNNCC	2 cut(s)	213, 764
RsaI	GTAC	2 cut(s)	199, 764
RsaNI	GTAC	2 cut(s)	198, 763
SapI	GCTCTTC	1 cut(s)	654
SaqAI	TTAA	1 cut(s)	561
SatI	GCNGC	3 cut(s)	411, 414, 509
Sau3AI	GATC	6 cut(s)	170, 315, 352, 550, 589, 733
SchI	GAGTC	2 cut(s)	135, 170
SduI	GDGCHC	1 cut(s)	649
SfaNI	GCATC	1 cut(s)	753
SfcI	CTRYAG	1 cut(s)	222
Sse9I	AATT	6 cut(s)	15, 52, 105, 151, 269, 570
SsiI	CCGC	1 cut(s)	492
SspMI	CTAG	2 cut(s)	407, 614
StyI	CCWWGG	1 cut(s)	386
TaaI	ACNGT	1 cut(s)	396
TaiI	ACGT	2 cut(s)	541, 548
TaqI	TCGA	1 cut(s)	65
TasI	AATT	6 cut(s)	15, 52, 105, 151, 269, 570
TfiI	GAWTC	3 cut(s)	67, 473, 479
Tru1I	TTAA	1 cut(s)	561
Tru9I	TTAA	1 cut(s)	561
TseI	GCWGC	3 cut(s)	410, 413, 508
TspDTI	ATGAA	4 cut(s)	45, 249, 471, 473
Van91I	CCANNNNNTGG	1 cut(s)	156
XapI	RAATTY	1 cut(s)	269
XceI	RCATGY	1 cut(s)	757
XspI	CTAG	2 cut(s)	407, 614
ZraI	GACGTC	1 cut(s)	546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.