Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0012869

Physical Location & Seq

Genomic Coordinates Forward (+)

27112824 .. 27115807

Gene Structure 2984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G296900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 744 bp

ATGCGTACGCTCACTCTCGTCGCTTCCTATCCTCTATGCCCAATTGTTTCATTTGAATTGTGTCGTCAAGCATCAAACAAGTTATTCTTTCCTTGCAATATAAGCGAGAAGCTTGCTAAAGCAAGCAGGGTGCATAAGACATATCAACTCAAGGCTGGATTTTGGGAATCCATTAAATCTGGTATTTTAAACAACAACACAACACAAGTAGTAGAACCCCCCTCAACGCTTCCAGAAGAGGAAGAAGAACCTTTGCCTCAAGAATTTGTTCTCATTGAAAAGACTGAACCAGATGGAACAGTTGAAGAAATAATATTTTCTTCTGGTGGAGATATTGATGTGTATGATCTTCAAGCCCTTTGTGATAAGGTAGGCTGGCCTCGGAGGCCGCTGTCGAAACTAGCTGCAGCTTTGAAAAATAGCTACATGGTAGCCACGTTGCATTCAGTTCGGAAATCACCTGGATCAGAGGGGAATGACCAAAAGAAGTTAATTGGCATGGCTCGAGCTACATCAGATCATGCCTTCAATGCTACAATCTGGGATGTCCTTGTTGATCCTGGTTATCAGGGCCAAGGCCTCGGAAAGGCCCTTGTTGAAAAGCTTATAAGGGCTCTTCTGCAGAGGGACATCGGAAATATTTCACTGTTTGCAGATAGTCAAGTTGTGGAGTTCTATCAAAATTTGGGTTTTGAACCTGACCCAGAGGGCATTAAAGGGATGTTTTGGTACCCAAAGTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004059 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006725 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009058 GO:0009507 GO:0009536 GO:0009987 GO:0010817 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0018130 GO:0019438 GO:0030186 GO:0030187 GO:0034641 GO:0034754 GO:0042430 GO:0042435 GO:0042445 GO:0042446 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00380 map00380

Pfam Domains

Protein Families

Acetyltransf_1 Acetyltransf_10

Protein Analysis

248

Amino Acids

27.53

Weight (kDa)

5.37

Isoelectric Point (pI)

46.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32070 AT1G32070 AT1G32070
fragaria_vesca	FvH4_6g09480
malus_domestica	MD04G1177200.v1.1 MD04G1177300.v1.1 MD12G1192400.v1.1
prunus_persica	Prupe.6G296900_v2.0.a1 Prupe.6G297300_v2.0.a1
pyrus_communis	pycom12g17940
rosa_chinensis	RchiOBHm_Chr3g0460061
rosa_laevigata	RLG00000025047
rosa_multiflora	Rmu_sc0021757.1_g000001
rosa_roxburghii	Rroxscaffold_6G00419880
rosa_samantha	Rh3AG097600 Rh3BG100700 Rh3CG102800
rosa_wichuraiana	Rw3G008230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	608
Acc65I	GGTACC	1 cut(s)	729
AccB1I	GGYRCC	1 cut(s)	729
AciI	CCGC	1 cut(s)	389
AclWI	GGATC	2 cut(s)	472, 551
AcsI	RAATTY	2 cut(s)	263, 682
AfaI	GTAC	2 cut(s)	7, 731
AfiI	CCNNNNNNNGG	1 cut(s)	586
AgsI	TTSAA	8 cut(s)	56, 278, 305, 353, 415, 529, 599, 695
AjnI	CCWGG	2 cut(s)	460, 559
AluBI	AGCT	6 cut(s)	112, 404, 410, 423, 509, 604
AluI	AGCT	6 cut(s)	112, 404, 410, 423, 509, 604
AlwI	GGATC	2 cut(s)	472, 551
Ama87I	CYCGRG	1 cut(s)	504
AoxI	GGCC	5 cut(s)	377, 386, 571, 577, 588
ApeKI	GCWGC	2 cut(s)	404, 407
ApoI	RAATTY	2 cut(s)	263, 682
Asp700I	GAANNNNTTC	2 cut(s)	267, 640
Asp718I	GGTACC	1 cut(s)	729
AspS9I	GGNCC	2 cut(s)	571, 589
AsuHPI	GGTGA	1 cut(s)	450
AvaI	CYCGRG	1 cut(s)	504
BanI	GGYRCC	1 cut(s)	729
BanII	GRGCYC	1 cut(s)	616
BbvI	GCAGC	2 cut(s)	391, 419
BccI	CCATC	1 cut(s)	287
BcgI	CGANNNNNNTGC	4 cut(s)	95, 129, 431, 465
BciT130I	CCWGG	2 cut(s)	462, 561
BfaI	CTAG	1 cut(s)	401
BfmI	CTRYAG	2 cut(s)	405, 620
BglI	GCCNNNNNGGC	1 cut(s)	385
BisI	GCNGC	3 cut(s)	389, 405, 408
BlsI	GCNGC	3 cut(s)	390, 406, 409
Bme1390I	CCNGG	2 cut(s)	462, 561
BmeT110I	CYCGRG	1 cut(s)	504
BmgT120I	GGNCC	2 cut(s)	571, 589
BmiI	GGNNCC	1 cut(s)	731
BmrFI	CCNGG	2 cut(s)	462, 561
BmsI	GCATC	1 cut(s)	80
BpuEI	CTTGAG	2 cut(s)	134, 243
BsaJI	CCNNGG	3 cut(s)	380, 574, 580
Bsc4I	CCNNNNNNNGG	1 cut(s)	586
BseBI	CCWGG	2 cut(s)	462, 561
BseDI	CCNNGG	3 cut(s)	380, 574, 580
BseGI	GGATG	2 cut(s)	550, 726
BseLI	CCNNNNNNNGG	1 cut(s)	586
BseXI	GCAGC	2 cut(s)	391, 419
BshFI	GGCC	5 cut(s)	379, 388, 573, 579, 590
BshNI	GGYRCC	1 cut(s)	729
BsiHKCI	CYCGRG	1 cut(s)	504
BsiWI	CGTACG	1 cut(s)	5
BslFI	GGGAC	1 cut(s)	641
BslI	CCNNNNNNNGG	1 cut(s)	586
BsmFI	GGGAC	1 cut(s)	641
BsmI	GAATGC	1 cut(s)	442
BsnI	GGCC	5 cut(s)	379, 388, 573, 579, 590
BsoBI	CYCGRG	1 cut(s)	504
Bsp1286I	GDGCHC	1 cut(s)	616
Bsp143I	GATC	4 cut(s)	346, 464, 517, 556
BspACI	CCGC	1 cut(s)	389
BspANI	GGCC	5 cut(s)	379, 388, 573, 579, 590
BspLI	GGNNCC	1 cut(s)	731
BspMAI	CTGCAG	2 cut(s)	409, 624
BspPI	GGATC	2 cut(s)	472, 551
BspQI	GCTCTTC	1 cut(s)	621
BspT107I	GGYRCC	1 cut(s)	729
BssECI	CCNNGG	3 cut(s)	380, 574, 580
BssMI	GATC	4 cut(s)	346, 464, 517, 556
BssT1I	CCWWGG	1 cut(s)	574
Bst2UI	CCWGG	2 cut(s)	462, 561
Bst4CI	ACNGT	2 cut(s)	301, 648
Bst6I	CTCTTC	2 cut(s)	231, 621
BstC8I	GCNNGC	3 cut(s)	114, 124, 377
BstENI	CCTNNNNNAGG	1 cut(s)	584
BstF5I	GGATG	2 cut(s)	550, 726
BstKTI	GATC	4 cut(s)	349, 467, 520, 559
BstMBI	GATC	4 cut(s)	346, 464, 517, 556
BstMWI	GCNNNNNNNGC	3 cut(s)	102, 385, 530
BstNI	CCWGG	2 cut(s)	462, 561
BstSCI	CCNGG	2 cut(s)	460, 559
BstSFI	CTRYAG	2 cut(s)	405, 620
BstV1I	GCAGC	2 cut(s)	391, 419
BsuRI	GGCC	5 cut(s)	379, 388, 573, 579, 590
BtsCI	GGATG	2 cut(s)	550, 726
BtsIMutI	CAGTG	1 cut(s)	644
Cac8I	GCNNGC	3 cut(s)	114, 124, 377
Cfr13I	GGNCC	2 cut(s)	571, 589
Csp6I	GTAC	2 cut(s)	6, 730
CviAII	CATG	3 cut(s)	427, 499, 521
CviQI	GTAC	2 cut(s)	6, 730
DpnI	GATC	4 cut(s)	348, 466, 519, 558
DpnII	GATC	4 cut(s)	346, 464, 517, 556
DraI	TTTAAA	1 cut(s)	189
Eam1104I	CTCTTC	2 cut(s)	231, 621
EarI	CTCTTC	2 cut(s)	231, 621
Eco130I	CCWWGG	1 cut(s)	574
Eco147I	AGGCCT	1 cut(s)	579
Eco24I	GRGCYC	1 cut(s)	616
Eco88I	CYCGRG	1 cut(s)	504
EcoNI	CCTNNNNNAGG	1 cut(s)	584
EcoO109I	RGGNCCY	1 cut(s)	589
EcoRII	CCWGG	2 cut(s)	460, 559
EcoT14I	CCWWGG	1 cut(s)	574
EcoT38I	GRGCYC	1 cut(s)	616
ErhI	CCWWGG	1 cut(s)	574
FaeI	CATG	3 cut(s)	430, 502, 524
FaiI	YATR	9 cut(s)	37, 101, 135, 142, 345, 428, 500, 522, 608
FalI	AAGNNNNNCTT	2 cut(s)	71, 103
FaqI	GGGAC	1 cut(s)	641
FatI	CATG	3 cut(s)	426, 498, 520
Fnu4HI	GCNGC	3 cut(s)	389, 405, 408
FokI	GGATG	2 cut(s)	557, 733
FriOI	GRGCYC	1 cut(s)	616
Fsp4HI	GCNGC	3 cut(s)	389, 405, 408
FspBI	CTAG	1 cut(s)	401
GluI	GCNGC	3 cut(s)	389, 405, 408
HaeIII	GGCC	5 cut(s)	379, 388, 573, 579, 590
Hin1II	CATG	3 cut(s)	430, 502, 524
HindIII	AAGCTT	2 cut(s)	110, 602
HinfI	GANTC	1 cut(s)	167
HphI	GGTGA	1 cut(s)	450
Hpy188I	TCNGA	6 cut(s)	384, 453, 469, 517, 584, 635
Hpy188III	TCNNGA	2 cut(s)	233, 260
Hpy99I	CGWCG	1 cut(s)	23
HpyAV	CCTTC	1 cut(s)	535
HpyCH4III	ACNGT	2 cut(s)	301, 648
HpyCH4IV	ACGT	1 cut(s)	437
HpyCH4V	TGCA	6 cut(s)	96, 133, 407, 442, 622, 653
HpyF10VI	GCNNNNNNNGC	3 cut(s)	102, 385, 530
HpySE526I	ACGT	1 cut(s)	437
Hsp92II	CATG	3 cut(s)	430, 502, 524
KpnI	GGTACC	1 cut(s)	733
Kzo9I	GATC	4 cut(s)	346, 464, 517, 556
LguI	GCTCTTC	1 cut(s)	621
Lsp1109I	GCAGC	2 cut(s)	391, 419
LweI	GCATC	1 cut(s)	80
MaeI	CTAG	1 cut(s)	401
MaeII	ACGT	1 cut(s)	437
MalI	GATC	4 cut(s)	348, 466, 519, 558
MboI	GATC	4 cut(s)	346, 464, 517, 556
MboII	GAAGA	7 cut(s)	248, 254, 257, 312, 317, 341, 608
MfeI	CAATTG	1 cut(s)	42
MhlI	GDGCHC	1 cut(s)	616
MluCI	AATT	5 cut(s)	42, 56, 263, 492, 682
MroXI	GAANNNNTTC	2 cut(s)	267, 640
MseI	TTAA	4 cut(s)	174, 188, 491, 714
MspA1I	CMGCKG	1 cut(s)	391
MspR9I	CCNGG	2 cut(s)	462, 561
MunI	CAATTG	1 cut(s)	42
Mva1269I	GAATGC	1 cut(s)	442
MvaI	CCWGG	2 cut(s)	462, 561
MwoI	GCNNNNNNNGC	3 cut(s)	102, 385, 530
NdeII	GATC	4 cut(s)	346, 464, 517, 556
NlaIII	CATG	3 cut(s)	430, 502, 524
NlaIV	GGNNCC	1 cut(s)	731
PaeR7I	CTCGAG	1 cut(s)	504
PceI	AGGCCT	1 cut(s)	579
PciSI	GCTCTTC	1 cut(s)	621
PctI	GAATGC	1 cut(s)	442
PdmI	GAANNNNTTC	2 cut(s)	267, 640
PfeI	GAWTC	1 cut(s)	167
Pfl23II	CGTACG	1 cut(s)	5
PkrI	GCNGC	3 cut(s)	390, 406, 409
PsiI	TTATAA	1 cut(s)	608
Psp6I	CCWGG	2 cut(s)	460, 559
PspGI	CCWGG	2 cut(s)	460, 559
PspLI	CGTACG	1 cut(s)	5
PspN4I	GGNNCC	1 cut(s)	731
PspPI	GGNCC	2 cut(s)	571, 589
PspXI	VCTCGAGB	1 cut(s)	504
PstI	CTGCAG	2 cut(s)	409, 624
RsaI	GTAC	2 cut(s)	7, 731
RsaNI	GTAC	2 cut(s)	6, 730
SapI	GCTCTTC	1 cut(s)	621
SaqAI	TTAA	4 cut(s)	174, 188, 491, 714
SatI	GCNGC	3 cut(s)	389, 405, 408
Sau3AI	GATC	4 cut(s)	346, 464, 517, 556
Sau96I	GGNCC	2 cut(s)	571, 589
ScrFI	CCNGG	2 cut(s)	462, 561
SduI	GDGCHC	1 cut(s)	616
SfaNI	GCATC	1 cut(s)	80
SfcI	CTRYAG	2 cut(s)	405, 620
SfiI	GGCCNNNNNGGCC	1 cut(s)	385
Sfr274I	CTCGAG	1 cut(s)	504
SlaI	CTCGAG	1 cut(s)	504
SmlI	CTYRAG	3 cut(s)	149, 258, 504
SmoI	CTYRAG	3 cut(s)	149, 258, 504
Sse9I	AATT	5 cut(s)	42, 56, 263, 492, 682
SseBI	AGGCCT	1 cut(s)	579
SsiI	CCGC	1 cut(s)	389
SspI	AATATT	2 cut(s)	315, 640
SspMI	CTAG	1 cut(s)	401
StuI	AGGCCT	1 cut(s)	579
StyD4I	CCNGG	2 cut(s)	460, 559
StyI	CCWWGG	1 cut(s)	574
TaaI	ACNGT	2 cut(s)	301, 648
TaiI	ACGT	1 cut(s)	440
TaqI	TCGA	2 cut(s)	395, 505
TasI	AATT	5 cut(s)	42, 56, 263, 492, 682
TauI	GCSGC	1 cut(s)	391
TfiI	GAWTC	1 cut(s)	167
Tru1I	TTAA	4 cut(s)	174, 188, 491, 714
Tru9I	TTAA	4 cut(s)	174, 188, 491, 714
TscAI	CASTG	1 cut(s)	651
TseI	GCWGC	2 cut(s)	404, 407
TspDTI	ATGAA	1 cut(s)	39
TspRI	CASTG	1 cut(s)	651
XagI	CCTNNNNNAGG	1 cut(s)	584
XapI	RAATTY	2 cut(s)	263, 682
XhoI	CTCGAG	1 cut(s)	504
XmnI	GAANNNNTTC	2 cut(s)	267, 640
XspI	CTAG	1 cut(s)	401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.