FvH4_6g09480

Acetyltransferase NSI-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
5655325 .. 5658876
3552 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g09480.t1

Sequence Viewer

Length: 741 bp
ATGCCTACTACGCTCAGAGCCTTCTATCCTCTGTGCCCTATTGCTTCGTTTGATTTGGGTTGTCTTCAAGTATCAAATAAGTTATTGTTTCCTTGCAATTTAAGCCACGGCCTTATTAAAGGAAGCAGAATTCATAAGACATATCAACTCAAGGCTGGCTTTTGGGAATCAATTAAATCTGGTATCTTAAGCAACAACACAACACAAGTAGTGGAACCACCATCCACACTTGCAGAAGAGGAAGAACCCCTTCCTGAAGAGTTGGTTCTCATTGAAAAGACTGAACCAGATGGAACAGTTGAAGAAATAATTTTTTCTTCTGGTGGAGATGTTGATGTGTATGATCTTCAATCCCTCTGCGATAAGGTAGGCTGGCCTCGCAGGCCACTTTCAAAACTGGCTGCAGCTTTGAAAAATAGCTACATGGTAGCCACATTACATTCGGTTCGGAAATCACCAGGATCAGACGGGTATGACCAGAAGAAGCTAATTGGGTTGGCGCGAGCTACATCTGACCATGCGTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTAGCTATCAGGGACAAGGCCTTGGAAAGACCCTAGTTGAAAAGATTATAAGGGCTCTTCTGCAGAGGGACATTGGCAATATTTCACTATTTGCAGATAGTCAAGTCGTGGATTTCTATCAAAATTTGGGTTTTGAAGCTGACCCGGAGGGCATCAAAGGCATGTTTTGGTACCCAAAGTTTTAG

Protein Analysis

247

Amino Acids

27.23

Weight (kDa)

5.29

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 157 - 230 2.6e-13 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 159 - 231 2.6e-11 Acetyltransferase (GNAT) domain
Acetyltransf_10 PF13673 159 - 233 4.5e-11 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012869)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 605
Acc65I GGTACC 1 cut(s) 726
AccB1I GGYRCC 1 cut(s) 726
AccB7I CCANNNNNTGG 1 cut(s) 537
AccII CGCG 1 cut(s) 502
AclWI GGATC 2 cut(s) 469, 548
AcsI RAATTY 2 cut(s) 129, 679
AcuI CTGAAG 1 cut(s) 276
AfaI GTAC 1 cut(s) 728
AfiI CCNNNNNNNGG 1 cut(s) 537
AflII CTTAAG 1 cut(s) 187
AgsI TTSAA 9 cut(s) 68, 275, 302, 350, 393, 412, 526, 596, 692
AjnI CCWGG 1 cut(s) 457
AluBI AGCT 6 cut(s) 407, 420, 487, 506, 561, 695
AluI AGCT 6 cut(s) 407, 420, 487, 506, 561, 695
AlwI GGATC 2 cut(s) 469, 548
AoxI GGCC 4 cut(s) 109, 374, 383, 574
ApeKI GCWGC 2 cut(s) 401, 404
ApoI RAATTY 2 cut(s) 129, 679
Asp700I GAANNNNTTC 1 cut(s) 249
Asp718I GGTACC 1 cut(s) 726
AspLEI GCGC 1 cut(s) 502
AsuC2I CCSGG 1 cut(s) 701
AsuHPI GGTGA 1 cut(s) 447
BaeGI GKGCMC 1 cut(s) 38
BanI GGYRCC 1 cut(s) 726
BanII GRGCYC 1 cut(s) 613
BbsI GAAGAC 1 cut(s) 56
BbvI GCAGC 2 cut(s) 388, 416
BccI CCATC 2 cut(s) 229, 284
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 1 cut(s) 459
BcnI CCSGG 1 cut(s) 701
BfaI CTAG 3 cut(s) 548, 558, 590
BfmI CTRYAG 2 cut(s) 402, 617
BfrI CTTAAG 1 cut(s) 187
BglI GCCNNNNNGGC 1 cut(s) 382
BisI GCNGC 2 cut(s) 402, 405
BlsI GCNGC 2 cut(s) 403, 406
Bme1390I CCNGG 2 cut(s) 459, 701
BmiI GGNNCC 2 cut(s) 216, 728
BmrFI CCNGG 2 cut(s) 459, 701
BmsI GCATC 1 cut(s) 717
BpiI GAAGAC 1 cut(s) 56
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 1 cut(s) 701
BsaBI GATNNNNATC 1 cut(s) 672
BsaJI CCNNGG 2 cut(s) 106, 577
Bsc4I CCNNNNNNNGG 1 cut(s) 537
Bse1I ACTGG 1 cut(s) 402
Bse8I GATNNNNATC 1 cut(s) 672
BseBI CCWGG 1 cut(s) 459
BseDI CCNNGG 2 cut(s) 106, 577
BseGI GGATG 2 cut(s) 221, 547
BseJI GATNNNNATC 1 cut(s) 672
BseLI CCNNNNNNNGG 1 cut(s) 537
BseMII CTCAG 1 cut(s) 28
BseNI ACTGG 1 cut(s) 402
BseSI GKGCMC 1 cut(s) 38
BseXI GCAGC 2 cut(s) 388, 416
Bsh1236I CGCG 1 cut(s) 502
BshFI GGCC 4 cut(s) 111, 376, 385, 576
BshNI GGYRCC 1 cut(s) 726
BsiSI CCGG 1 cut(s) 701
BslFI GGGAC 2 cut(s) 582, 638
BslI CCNNNNNNNGG 1 cut(s) 537
BsmFI GGGAC 2 cut(s) 582, 638
BsnI GGCC 4 cut(s) 111, 376, 385, 576
Bsp1286I GDGCHC 2 cut(s) 38, 613
Bsp143I GATC 3 cut(s) 343, 461, 553
BspANI GGCC 4 cut(s) 111, 376, 385, 576
BspCNI CTCAG 1 cut(s) 27
BspFNI CGCG 1 cut(s) 502
BspLI GGNNCC 2 cut(s) 216, 728
BspMAI CTGCAG 2 cut(s) 406, 621
BspPI GGATC 2 cut(s) 469, 548
BspQI GCTCTTC 1 cut(s) 618
BspT107I GGYRCC 1 cut(s) 726
BspTI CTTAAG 1 cut(s) 187
BsrI ACTGG 1 cut(s) 402
BssECI CCNNGG 2 cut(s) 106, 577
BssMI GATC 3 cut(s) 343, 461, 553
BssT1I CCWWGG 1 cut(s) 577
Bst2UI CCWGG 1 cut(s) 459
Bst4CI ACNGT 1 cut(s) 298
Bst6I CTCTTC 3 cut(s) 231, 252, 618
BstAFI CTTAAG 1 cut(s) 187
BstC8I GCNNGC 4 cut(s) 157, 374, 383, 504
BstDEI CTNAG 1 cut(s) 14
BstDSI CCRYGG 1 cut(s) 106
BstF5I GGATG 2 cut(s) 221, 547
BstFNI CGCG 1 cut(s) 502
BstHHI GCGC 1 cut(s) 502
BstKTI GATC 3 cut(s) 346, 464, 556
BstMBI GATC 3 cut(s) 343, 461, 553
BstMWI GCNNNNNNNGC 6 cut(s) 10, 102, 378, 382, 527, 714
BstNI CCWGG 1 cut(s) 459
BstNSI RCATGY 1 cut(s) 721
BstSCI CCNGG 2 cut(s) 457, 699
BstSFI CTRYAG 2 cut(s) 402, 617
BstSLI GKGCMC 1 cut(s) 38
BstUI CGCG 1 cut(s) 502
BstV1I GCAGC 2 cut(s) 388, 416
BstV2I GAAGAC 1 cut(s) 56
BsuRI GGCC 4 cut(s) 111, 376, 385, 576
BtgI CCRYGG 1 cut(s) 106
BtsCI GGATG 2 cut(s) 221, 547
Cac8I GCNNGC 4 cut(s) 157, 374, 383, 504
CfoI GCGC 1 cut(s) 502
Csp6I GTAC 1 cut(s) 727
CviAII CATG 3 cut(s) 424, 518, 718
CviQI GTAC 1 cut(s) 727
DdeI CTNAG 1 cut(s) 14
DpnI GATC 3 cut(s) 345, 463, 555
DpnII GATC 3 cut(s) 343, 461, 553
Eam1104I CTCTTC 3 cut(s) 231, 252, 618
EarI CTCTTC 3 cut(s) 231, 252, 618
Eco130I CCWWGG 1 cut(s) 577
Eco147I AGGCCT 1 cut(s) 576
Eco24I GRGCYC 1 cut(s) 613
Eco57I CTGAAG 1 cut(s) 276
EcoRI GAATTC 1 cut(s) 129
EcoRII CCWGG 1 cut(s) 457
EcoT14I CCWWGG 1 cut(s) 577
EcoT38I GRGCYC 1 cut(s) 613
ErhI CCWWGG 1 cut(s) 577
FaeI CATG 3 cut(s) 427, 521, 721
FaiI YATR 8 cut(s) 135, 142, 342, 425, 474, 519, 605, 719
FalI AAGNNNNNCTT 4 cut(s) 143, 175, 234, 266
FaqI GGGAC 2 cut(s) 582, 638
FatI CATG 3 cut(s) 423, 517, 717
Fnu4HI GCNGC 2 cut(s) 402, 405
FokI GGATG 2 cut(s) 208, 554
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 2 cut(s) 402, 405
FspBI CTAG 3 cut(s) 548, 558, 590
GlaI GCGC 1 cut(s) 501
GluI GCNGC 2 cut(s) 402, 405
HaeIII GGCC 4 cut(s) 111, 376, 385, 576
HapII CCGG 1 cut(s) 701
HhaI GCGC 1 cut(s) 502
Hin1II CATG 3 cut(s) 427, 521, 721
Hin6I GCGC 1 cut(s) 500
HinP1I GCGC 1 cut(s) 500
HinfI GANTC 1 cut(s) 167
HpaII CCGG 1 cut(s) 701
HphI GGTGA 1 cut(s) 447
Hpy188I TCNGA 4 cut(s) 17, 450, 466, 514
Hpy188III TCNNGA 1 cut(s) 254
HpyAV CCTTC 2 cut(s) 31, 260
HpyCH4III ACNGT 1 cut(s) 298
HpyCH4V TGCA 5 cut(s) 96, 233, 404, 619, 650
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 102, 378, 382, 527, 714
HpyF3I CTNAG 1 cut(s) 14
Hsp92II CATG 3 cut(s) 427, 521, 721
HspAI GCGC 1 cut(s) 500
KpnI GGTACC 1 cut(s) 730
Kzo9I GATC 3 cut(s) 343, 461, 553
LguI GCTCTTC 1 cut(s) 618
Lsp1109I GCAGC 2 cut(s) 388, 416
LweI GCATC 1 cut(s) 717
MaeI CTAG 3 cut(s) 548, 558, 590
MalI GATC 3 cut(s) 345, 463, 555
MboI GATC 3 cut(s) 343, 461, 553
MboII GAAGA 9 cut(s) 56, 248, 254, 269, 309, 314, 338, 493, 605
MhlI GDGCHC 2 cut(s) 38, 613
MluCI AATT 7 cut(s) 97, 129, 171, 309, 489, 534, 679
MnlI CCTC 6 cut(s) 39, 232, 365, 387, 615, 697
MroXI GAANNNNTTC 1 cut(s) 249
MseI TTAA 4 cut(s) 101, 117, 174, 188
MspCI CTTAAG 1 cut(s) 187
MspI CCGG 1 cut(s) 701
MspR9I CCNGG 2 cut(s) 459, 701
MvaI CCWGG 1 cut(s) 459
MvnI CGCG 1 cut(s) 502
MwoI GCNNNNNNNGC 6 cut(s) 10, 102, 378, 382, 527, 714
NciI CCSGG 1 cut(s) 701
NdeII GATC 3 cut(s) 343, 461, 553
NlaIII CATG 3 cut(s) 427, 521, 721
NlaIV GGNNCC 2 cut(s) 216, 728
NspI RCATGY 1 cut(s) 721
PceI AGGCCT 1 cut(s) 576
PciSI GCTCTTC 1 cut(s) 618
PdmI GAANNNNTTC 1 cut(s) 249
PfeI GAWTC 1 cut(s) 167
PflMI CCANNNNNTGG 1 cut(s) 537
PkrI GCNGC 2 cut(s) 403, 406
PsiI TTATAA 1 cut(s) 605
Psp6I CCWGG 1 cut(s) 457
PspGI CCWGG 1 cut(s) 457
PspN4I GGNNCC 2 cut(s) 216, 728
PstI CTGCAG 2 cut(s) 406, 621
RsaI GTAC 1 cut(s) 728
RsaNI GTAC 1 cut(s) 727
SapI GCTCTTC 1 cut(s) 618
SaqAI TTAA 4 cut(s) 101, 117, 174, 188
SatI GCNGC 2 cut(s) 402, 405
Sau3AI GATC 3 cut(s) 343, 461, 553
ScrFI CCNGG 2 cut(s) 459, 701
SduI GDGCHC 2 cut(s) 38, 613
SetI ASST 7 cut(s) 369, 409, 422, 489, 508, 563, 697
SfaNI GCATC 1 cut(s) 717
SfcI CTRYAG 2 cut(s) 402, 617
SfiI GGCCNNNNNGGCC 1 cut(s) 382
SmlI CTYRAG 2 cut(s) 149, 187
SmoI CTYRAG 2 cut(s) 149, 187
Sse9I AATT 7 cut(s) 97, 129, 171, 309, 489, 534, 679
SseBI AGGCCT 1 cut(s) 576
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 548, 558, 590
StuI AGGCCT 1 cut(s) 576
StyD4I CCNGG 2 cut(s) 457, 699
StyI CCWWGG 1 cut(s) 577
TaaI ACNGT 1 cut(s) 298
TasI AATT 7 cut(s) 97, 129, 171, 309, 489, 534, 679
TfiI GAWTC 1 cut(s) 167
Tru1I TTAA 4 cut(s) 101, 117, 174, 188
Tru9I TTAA 4 cut(s) 101, 117, 174, 188
TseI GCWGC 2 cut(s) 401, 404
TspDTI ATGAA 1 cut(s) 122
Van91I CCANNNNNTGG 1 cut(s) 537
Vha464I CTTAAG 1 cut(s) 187
XapI RAATTY 2 cut(s) 129, 679
XceI RCATGY 1 cut(s) 721
XmnI GAANNNNTTC 1 cut(s) 249
XspI CTAG 3 cut(s) 548, 558, 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.