Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008698

Physical Location & Seq

Genomic Coordinates Reverse (-)

11795609 .. 11797221

Gene Structure 1613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G32610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGGATAGGACTTGTTGGTATTATGATCAGTTAGGTGTGAATAAGATTGGGAAGAACATAAAGAAGAGTCCTTTACCACAACCACAAGGTTATAGCATGAGCAACAATGATTTTACAAGTATTGTTCAACAGCTTACGGATTCTCCGTCGCGTGAGAGTTTACCTCAGCCTCTTCCTCGGAATCTGTTGAAGCCTCAGCAGAAGATTAGACCAGTGGGTCAAATACAGATAAACCGGCCCTGTGTTCCTCCTCCTGTAATGGCTCAACCTACTCATGAGTTTGTTGCTAGACCTCCAATGCATCCTTTGCCACATGGTTCACAACCAATTATCAGTCATGGAGACCAGTTTGGGTCTAATACAGCTGAGTCTTCTGTCTCGGTGTATATGCGTTATCGTCAAAGCTCACTTGGAGATTCTGGACCTAATGAAAACCAAATGCAGCCATCTCATGACAATCAACAGCAGCCACAGGTGGAAGGTCAAGCTCAATCGCATAATCATCATTCGCCACGGTTCAATGATTCTGCACGAAACACACCCATTTTGCCAACTCCTAAGTTCGACGGTCCGCCACAACAGATGCATAATAATAGTCTTCCTTCTCCTCGATTCAACGGTCGAGGGATATTACCTACTCCAACGTCCCAATATCGTCCACAATCTCCAACTGCTTACCGGAATTTGCTCTCCCCTAGGTCACCTTCTCCGCTGCTGTCTACAGGAGTTCAATATCCTCCACCACTAACACCAAGAAACTATACATTCTCATCAATGGATCAACCTGGAATTCTCGGTCCGGGCACAATTCCTCTGCCTCATGCATCTCCGTTTGGGGTTATACCAATATCTAGTCAAAGATGGAGAGGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009960 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0040008 GO:0043076 GO:0043078 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048316 GO:0048580 GO:0048608 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0061458 GO:0065007 GO:0080050 GO:0080113 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

291

Amino Acids

32.36

Weight (kDa)

9.86

Isoelectric Point (pI)

74.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32610 AT1G32610 AT1G32610 AT2G35230 AT2G35230 AT2G35230
fragaria_vesca	FvH4_4g21960
malus_domestica	MD06G1101200.v1.1 MD14G1120900.v1.1
prunus_persica	Prupe.5G036600_v2.0.a1 Prupe.5G036600_v2.0.a1 Prupe.5G036600_v2.0.a1
pyrus_communis	pycom06g09640
rosa_chinensis	RchiOBHm_Chr7g0209711
rosa_laevigata	RLG00000003100
rosa_multiflora	Rmu_sc0002616.1_g000013
rosa_roxburghii	Rroxscaffold_3G00249130
rosa_rugosa	Rorug07G0115600
rosa_samantha	Rh7AG249300 Rh7BG243200 Rh7CG265300 Rh7DG255100
rosa_wichuraiana	Rw7G021130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	216
AccI	GTMKAC	1 cut(s)	719
AccII	CGCG	1 cut(s)	151
AciI	CCGC	2 cut(s)	572, 710
AclWI	GGATC	1 cut(s)	786
AcsI	RAATTY	2 cut(s)	682, 789
AgsI	TTSAA	5 cut(s)	128, 190, 520, 616, 731
AjnI	CCWGG	1 cut(s)	784
AluBI	AGCT	4 cut(s)	133, 365, 405, 488
AluI	AGCT	4 cut(s)	133, 365, 405, 488
Alw26I	GTCTC	2 cut(s)	336, 382
AlwI	GGATC	1 cut(s)	786
AoxI	GGCC	1 cut(s)	236
ApeKI	GCWGC	3 cut(s)	442, 466, 712
ApoI	RAATTY	2 cut(s)	682, 789
AspA2I	CCTAGG	1 cut(s)	695
AspS9I	GGNCC	4 cut(s)	237, 422, 569, 797
AsuC2I	CCSGG	1 cut(s)	801
AsuHPI	GGTGA	1 cut(s)	693
AvaII	GGWCC	3 cut(s)	422, 569, 797
AvrII	CCTAGG	1 cut(s)	695
BaeGI	GKGCMC	1 cut(s)	806
BbsI	GAAGAC	2 cut(s)	363, 590
BbvCI	CCTCAGC	2 cut(s)	165, 195
BbvI	GCAGC	3 cut(s)	454, 478, 699
BccI	CCATC	2 cut(s)	454, 855
BciT130I	CCWGG	1 cut(s)	786
BclI	TGATCA	1 cut(s)	25
BcnI	CCSGG	1 cut(s)	801
BcoDI	GTCTC	2 cut(s)	336, 382
BfaI	CTAG	3 cut(s)	288, 696, 852
BfmI	CTRYAG	1 cut(s)	720
BisI	GCNGC	3 cut(s)	443, 467, 713
BlnI	CCTAGG	1 cut(s)	695
BlsI	GCNGC	3 cut(s)	444, 468, 714
Bme1390I	CCNGG	2 cut(s)	786, 801
Bme18I	GGWCC	3 cut(s)	422, 569, 797
BmgT120I	GGNCC	4 cut(s)	237, 422, 569, 797
BmrFI	CCNGG	2 cut(s)	786, 801
BmsI	GCATC	3 cut(s)	310, 573, 833
BpiI	GAAGAC	2 cut(s)	363, 590
BplI	GAGNNNNNCTC	2 cut(s)	148, 180
Bpu10I	CCTNAGC	2 cut(s)	165, 195
BpuMI	CCSGG	1 cut(s)	801
BsaI	GGTCTC	1 cut(s)	336
BsaJI	CCNNGG	3 cut(s)	176, 512, 695
BsaWI	WCCGGW	1 cut(s)	678
BsaXI	ACNNNNNCTCC	2 cut(s)	127, 157
Bse118I	RCCGGY	1 cut(s)	234
Bse1I	ACTGG	2 cut(s)	212, 346
BseBI	CCWGG	1 cut(s)	786
BseDI	CCNNGG	3 cut(s)	176, 512, 695
BseGI	GGATG	1 cut(s)	301
BseMII	CTCAG	3 cut(s)	179, 209, 357
BseNI	ACTGG	2 cut(s)	212, 346
BseRI	GAGGAG	2 cut(s)	240, 597
BseSI	GKGCMC	1 cut(s)	806
BseXI	GCAGC	3 cut(s)	454, 478, 699
BsgI	GTGCAG	1 cut(s)	513
Bsh1236I	CGCG	1 cut(s)	151
Bsh1285I	CGRYCG	1 cut(s)	622
BshFI	GGCC	1 cut(s)	238
BsiEI	CGRYCG	1 cut(s)	622
BsiSI	CCGG	3 cut(s)	235, 679, 800
BslFI	GGGAC	1 cut(s)	631
BsmAI	GTCTC	2 cut(s)	336, 382
BsmFI	GGGAC	1 cut(s)	631
BsnI	GGCC	1 cut(s)	238
Bso31I	GGTCTC	1 cut(s)	336
Bsp1286I	GDGCHC	1 cut(s)	806
Bsp143I	GATC	2 cut(s)	25, 778
BspACI	CCGC	2 cut(s)	572, 710
BspANI	GGCC	1 cut(s)	238
BspCNI	CTCAG	3 cut(s)	178, 208, 358
BspFNI	CGCG	1 cut(s)	151
BspHI	TCATGA	2 cut(s)	274, 451
BspPI	GGATC	1 cut(s)	786
BspTNI	GGTCTC	1 cut(s)	336
BsrFI	RCCGGY	1 cut(s)	234
BsrI	ACTGG	2 cut(s)	212, 346
BssAI	RCCGGY	1 cut(s)	234
BssECI	CCNNGG	3 cut(s)	176, 512, 695
BssMI	GATC	2 cut(s)	25, 778
BssT1I	CCWWGG	1 cut(s)	695
Bst2UI	CCWGG	1 cut(s)	786
Bst4CI	ACNGT	3 cut(s)	516, 569, 620
Bst6I	CTCTTC	2 cut(s)	59, 177
BstAPI	GCANNNNNTGC	1 cut(s)	307
BstDEI	CTNAG	4 cut(s)	165, 195, 366, 558
BstDSI	CCRYGG	1 cut(s)	512
BstEII	GGTNACC	1 cut(s)	699
BstF5I	GGATG	1 cut(s)	301
BstFNI	CGCG	1 cut(s)	151
BstKTI	GATC	2 cut(s)	28, 781
BstMAI	GTCTC	2 cut(s)	336, 382
BstMBI	GATC	2 cut(s)	25, 778
BstMCI	CGRYCG	1 cut(s)	622
BstMWI	GCNNNNNNNGC	1 cut(s)	307
BstNI	CCWGG	1 cut(s)	786
BstPI	GGTNACC	1 cut(s)	699
BstSCI	CCNGG	2 cut(s)	784, 799
BstSFI	CTRYAG	1 cut(s)	720
BstSLI	GKGCMC	1 cut(s)	806
BstUI	CGCG	1 cut(s)	151
BstV1I	GCAGC	3 cut(s)	454, 478, 699
BstV2I	GAAGAC	2 cut(s)	363, 590
BsuRI	GGCC	1 cut(s)	238
BtgI	CCRYGG	1 cut(s)	512
BtsCI	GGATG	1 cut(s)	301
BtsIMutI	CAGTG	1 cut(s)	219
CciI	TCATGA	2 cut(s)	274, 451
Cfr10I	RCCGGY	1 cut(s)	234
Cfr13I	GGNCC	4 cut(s)	237, 422, 569, 797
CpoI	CGGWCCG	2 cut(s)	569, 797
CspI	CGGWCCG	2 cut(s)	569, 797
CviAII	CATG	6 cut(s)	97, 275, 314, 338, 452, 821
DdeI	CTNAG	4 cut(s)	165, 195, 366, 558
DpnI	GATC	2 cut(s)	27, 780
DpnII	GATC	2 cut(s)	25, 778
DrdI	GACNNNNNNGTC	1 cut(s)	216
DseDI	GACNNNNNNGTC	1 cut(s)	216
Eam1104I	CTCTTC	2 cut(s)	59, 177
EarI	CTCTTC	2 cut(s)	59, 177
EciI	GGCGGA	1 cut(s)	561
Eco130I	CCWWGG	1 cut(s)	695
Eco31I	GGTCTC	1 cut(s)	336
Eco47I	GGWCC	3 cut(s)	422, 569, 797
Eco91I	GGTNACC	1 cut(s)	699
EcoO65I	GGTNACC	1 cut(s)	699
EcoRI	GAATTC	1 cut(s)	789
EcoRII	CCWGG	1 cut(s)	784
EcoT14I	CCWWGG	1 cut(s)	695
EcoT22I	ATGCAT	3 cut(s)	303, 588, 826
ErhI	CCWWGG	1 cut(s)	695
FaeI	CATG	6 cut(s)	100, 278, 317, 341, 455, 824
FaqI	GGGAC	1 cut(s)	631
FatI	CATG	6 cut(s)	96, 274, 313, 337, 451, 820
FbaI	TGATCA	1 cut(s)	25
FblI	GTMKAC	1 cut(s)	719
Fnu4HI	GCNGC	3 cut(s)	443, 467, 713
FokI	GGATG	1 cut(s)	288
Fsp4HI	GCNGC	3 cut(s)	443, 467, 713
FspBI	CTAG	3 cut(s)	288, 696, 852
GluI	GCNGC	3 cut(s)	443, 467, 713
HaeIII	GGCC	1 cut(s)	238
HapII	CCGG	3 cut(s)	235, 679, 800
Hin1II	CATG	6 cut(s)	100, 278, 317, 341, 455, 824
HinfI	GANTC	7 cut(s)	67, 140, 181, 368, 416, 524, 612
HpaII	CCGG	3 cut(s)	235, 679, 800
HphI	GGTGA	1 cut(s)	693
Hpy166II	GTNNAC	4 cut(s)	161, 320, 659, 720
Hpy188I	TCNGA	1 cut(s)	180
Hpy188III	TCNNGA	3 cut(s)	275, 420, 452
Hpy8I	GTNNAC	4 cut(s)	161, 320, 659, 720
Hpy99I	CGWCG	2 cut(s)	151, 569
HpyAV	CCTTC	3 cut(s)	473, 612, 714
HpyCH4III	ACNGT	3 cut(s)	516, 569, 620
HpyCH4IV	ACGT	1 cut(s)	644
HpyCH4V	TGCA	5 cut(s)	301, 442, 530, 586, 824
HpyF10VI	GCNNNNNNNGC	1 cut(s)	307
HpyF3I	CTNAG	4 cut(s)	165, 195, 366, 558
HpySE526I	ACGT	1 cut(s)	644
Hsp92II	CATG	6 cut(s)	100, 278, 317, 341, 455, 824
Ksp22I	TGATCA	1 cut(s)	25
Kzo9I	GATC	2 cut(s)	25, 778
Lsp1109I	GCAGC	3 cut(s)	454, 478, 699
LweI	GCATC	3 cut(s)	310, 573, 833
MaeI	CTAG	3 cut(s)	288, 696, 852
MaeII	ACGT	1 cut(s)	644
MaeIII	GTNAC	2 cut(s)	699, 869
MalI	GATC	2 cut(s)	27, 780
MboI	GATC	2 cut(s)	25, 778
MboII	GAAGA	6 cut(s)	64, 76, 164, 214, 363, 590
MhlI	GDGCHC	1 cut(s)	806
MluCI	AATT	4 cut(s)	327, 682, 789, 807
MlyI	GAGTC	2 cut(s)	76, 377
MmeI	TCCRAC	2 cut(s)	665, 692
Mph1103I	ATGCAT	3 cut(s)	303, 588, 826
MspA1I	CMGCKG	2 cut(s)	365, 712
MspI	CCGG	3 cut(s)	235, 679, 800
MspR9I	CCNGG	2 cut(s)	786, 801
MvaI	CCWGG	1 cut(s)	786
MvnI	CGCG	1 cut(s)	151
MwoI	GCNNNNNNNGC	1 cut(s)	307
NciI	CCSGG	1 cut(s)	801
NdeII	GATC	2 cut(s)	25, 778
NlaIII	CATG	6 cut(s)	100, 278, 317, 341, 455, 824
NmuCI	GTSAC	1 cut(s)	699
NsiI	ATGCAT	3 cut(s)	303, 588, 826
PagI	TCATGA	2 cut(s)	274, 451
PcsI	WCGNNNNNNNCGW	1 cut(s)	143
PfeI	GAWTC	5 cut(s)	140, 181, 416, 524, 612
PkrI	GCNGC	3 cut(s)	444, 468, 714
PleI	GAGTC	2 cut(s)	75, 376
PpsI	GAGTC	2 cut(s)	75, 376
Psp6I	CCWGG	1 cut(s)	784
PspEI	GGTNACC	1 cut(s)	699
PspGI	CCWGG	1 cut(s)	784
PspPI	GGNCC	4 cut(s)	237, 422, 569, 797
PvuII	CAGCTG	1 cut(s)	365
Rsr2I	CGGWCCG	2 cut(s)	569, 797
RsrII	CGGWCCG	2 cut(s)	569, 797
SatI	GCNGC	3 cut(s)	443, 467, 713
Sau3AI	GATC	2 cut(s)	25, 778
Sau96I	GGNCC	4 cut(s)	237, 422, 569, 797
SchI	GAGTC	2 cut(s)	76, 377
ScrFI	CCNGG	2 cut(s)	786, 801
SduI	GDGCHC	1 cut(s)	806
SfaNI	GCATC	3 cut(s)	310, 573, 833
SfcI	CTRYAG	1 cut(s)	720
SinI	GGWCC	3 cut(s)	422, 569, 797
Sse9I	AATT	4 cut(s)	327, 682, 789, 807
SsiI	CCGC	2 cut(s)	572, 710
SspMI	CTAG	3 cut(s)	288, 696, 852
StyD4I	CCNGG	2 cut(s)	784, 799
StyI	CCWWGG	1 cut(s)	695
TaaI	ACNGT	3 cut(s)	516, 569, 620
TaiI	ACGT	1 cut(s)	647
TaqI	TCGA	3 cut(s)	564, 610, 622
TaqII	GACCGA	1 cut(s)	785
TasI	AATT	4 cut(s)	327, 682, 789, 807
TfiI	GAWTC	5 cut(s)	140, 181, 416, 524, 612
TscAI	CASTG	1 cut(s)	219
TseFI	GTSAC	1 cut(s)	699
TseI	GCWGC	3 cut(s)	442, 466, 712
Tsp45I	GTSAC	1 cut(s)	699
TspDTI	ATGAA	1 cut(s)	444
TspGWI	ACGGA	3 cut(s)	135, 152, 819
TspRI	CASTG	1 cut(s)	219
VpaK11BI	GGWCC	3 cut(s)	422, 569, 797
XapI	RAATTY	2 cut(s)	682, 789
XmaJI	CCTAGG	1 cut(s)	695
XmiI	GTMKAC	1 cut(s)	719
XspI	CTAG	3 cut(s)	288, 696, 852
Zsp2I	ATGCAT	3 cut(s)	303, 588, 826

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.