Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003331

Physical Location & Seq

Genomic Coordinates Reverse (-)

16787508 .. 16789436

Gene Structure 1929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G44130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGATATCAAGATTTTCTCTTCTTCTGTTCTTGTTCTTGGTCATAGTTCCTCTATCAAAATCTTCAATCTTCAAAACCTTCATCAAATCCTCTCCTTCCTCAGTCGTCTTCCCTCTCTCCGGCAACGTCTTCCCTCTCGGATACTACTCAGTCTTAATGCAAATAGGAAGCCCTCCAAAGGCATTTCAATTTGATATTGATACCGGAAGCGATCTCACTTGGGTTCAATGTGATGCTCCTTGCAGTGGTTGCACTTTGCCTCCTAATCTTCAGTACAAGCCTAAAGGAAACATTATCCCGTGCTCAAACCCGATCTGTACAGCTCTTCACTGGCCTAACAAGCCTCATTGCCCAAACCCGCAAGAACAATGTGACTATGAAGTTAAATATGCTGATCAAGGTTCATCAATGGGTGCACTTGTTACCGATCAGTTTCCTTTAAAACTCGTAAATGGCTCGTTCATGCAACCTCCTGTAGCATTCGGGTGTGGTTATGATCAGAGTTACCCTAGTGCACATCCTCCGCCCGCGACTGCTGGAGTTTTGGGACTTGGAAGAGGGAAAATCGGTCTCTTGACACAGCTTGTCTCCGCGGGACTAACAAGAAATGTGGTTGGACATTGCTTAAGTTCTAAAGGTGGAGGCTTTTTGTTCTTTGGAGACAATCTTGTTCCTTCCATTGGTGTGGCATGGACACCATTATTATCACAAGACAACCACTACACGACCGGACCAGCCGATCTTCTCTTCAACGGAAAGCCAACAGGTTTAAAAGGACTTAAACTCATTTTTGACACCGGAAGCTCTTACACTTACTTCAACAGCAAGGCATACCAAACAATAATTAACCTGATCGGAAATGATCTGAAAGTCTCACCGTTGAAGGTTGCGAAAGAAGATAAGACCTTACCAATCTGCTGGAAAGGAGCTAAGCCCTTTAAATCTGTTCTTGAGGTCAAGAACTTTTTCAAGACCATAACAATCAACTTCACCAATGGGAGAAGAAACACTCAGCTCTATCTTGCACCCGAATTATATCTCATTGTCTCTAAAACTGGAAACGTATGCTTGGGACTACTAAATGGAAGTGAAGTAGGATTACAAAACTCCAACGTAATCGGAGATATCTCTATGCAAGGGCTAATGATGATCTACGACAACGAGAAGCAACAACTCGGATGGGTTTCTTCAGATTGCAATAAGCTTCCCAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

405

Amino Acids

43.96

Weight (kDa)

8.87

Isoelectric Point (pI)

31.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	49 - 221	1.5e-46	Xylanase inhibitor N-terminal
Asp	PF00026	49 - 393	6e-14	Eukaryotic aspartyl protease
TAXi_C	PF14541	261 - 394	1.2e-15	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44130 AT1G77480 AT1G77480
fragaria_vesca	FvH4_2g27390 FvH4_2g27390 FvH4_2g27390
malus_domestica	MD15G1345400.v1.1
prunus_persica	Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.7G031200_v2.0.a1
pyrus_communis	pycom15g30990
rosa_chinensis	RchiOBHm_Chr6g0296231
rosa_laevigata	RLG00000011715
rosa_roxburghii	Rroxscaffold_7G00171720 Rroxscaffold_7G00178340
rosa_rugosa	Rorug06G0259700.1 Rorug06G0259800.1
rosa_samantha	Rh6AG371900 Rh6BG379800 Rh6CG385200 Rh6DG372400
rosa_wichuraiana	Rw6G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	530, 593
AciI	CCGC	5 cut(s)	359, 524, 528, 591, 593
AcuI	CTGAAG	2 cut(s)	254, 1173
AfaI	GTAC	2 cut(s)	275, 319
AfiI	CCNNNNNNNGG	4 cut(s)	119, 178, 245, 680
AflII	CTTAAG	1 cut(s)	625
AgsI	TTSAA	8 cut(s)	66, 73, 188, 227, 751, 820, 883, 970
AluBI	AGCT	6 cut(s)	323, 583, 804, 929, 1015, 1204
AluI	AGCT	6 cut(s)	323, 583, 804, 929, 1015, 1204
Alw21I	GWGCWC	3 cut(s)	305, 418, 517
Alw26I	GTCTC	5 cut(s)	575, 592, 654, 877, 1051
Alw44I	GTGCAC	2 cut(s)	414, 513
AoxI	GGCC	1 cut(s)	332
ApaLI	GTGCAC	2 cut(s)	414, 513
Asp700I	GAANNNNTTC	1 cut(s)	965
AspS9I	GGNCC	1 cut(s)	731
AsuHPI	GGTGA	2 cut(s)	867, 982
AvaII	GGWCC	1 cut(s)	731
BaeGI	GKGCMC	2 cut(s)	418, 517
BarI	GAAGNNNNNNTAC	2 cut(s)	1083, 1115
BbsI	GAAGAC	2 cut(s)	100, 121
Bbv12I	GWGCWC	3 cut(s)	305, 418, 517
BccI	CCATC	1 cut(s)	1173
BciVI	GTATCC	1 cut(s)	134
BclI	TGATCA	2 cut(s)	394, 496
BcoDI	GTCTC	5 cut(s)	575, 592, 654, 877, 1051
BfaI	CTAG	1 cut(s)	510
BfmI	CTRYAG	1 cut(s)	474
BfrI	CTTAAG	1 cut(s)	625
BfuI	GTATCC	1 cut(s)	134
BlpI	GCTNAGC	1 cut(s)	930
Bme18I	GGWCC	1 cut(s)	731
BmgT120I	GGNCC	1 cut(s)	731
BmsI	GCATC	1 cut(s)	223
BpiI	GAAGAC	2 cut(s)	100, 121
BpmI	CTGGAG	1 cut(s)	558
Bpu1102I	GCTNAGC	1 cut(s)	930
BpuEI	CTTGAG	1 cut(s)	971
BsaI	GGTCTC	1 cut(s)	575
BsaJI	CCNNGG	1 cut(s)	591
BsaWI	WCCGGW	3 cut(s)	203, 728, 797
BsaXI	ACNNNNNCTCC	2 cut(s)	244, 274
Bsc4I	CCNNNNNNNGG	4 cut(s)	119, 178, 245, 680
Bse1I	ACTGG	2 cut(s)	335, 1060
Bse3DI	GCAATG	2 cut(s)	346, 619
BseDI	CCNNGG	1 cut(s)	591
BseGI	GGATG	2 cut(s)	517, 1184
BseLI	CCNNNNNNNGG	4 cut(s)	119, 178, 245, 680
BseMI	GCAATG	2 cut(s)	346, 619
BseMII	CTCAG	3 cut(s)	114, 162, 1025
BseNI	ACTGG	2 cut(s)	335, 1060
BseSI	GKGCMC	2 cut(s)	418, 517
Bsh1236I	CGCG	2 cut(s)	530, 593
Bsh1285I	CGRYCG	1 cut(s)	729
BshFI	GGCC	1 cut(s)	334
BsiEI	CGRYCG	1 cut(s)	729
BsiHKAI	GWGCWC	3 cut(s)	305, 418, 517
BsiSI	CCGG	4 cut(s)	120, 204, 729, 798
BslFI	GGGAC	3 cut(s)	561, 609, 1086
BslI	CCNNNNNNNGG	4 cut(s)	119, 178, 245, 680
BsmAI	GTCTC	5 cut(s)	575, 592, 654, 877, 1051
BsmFI	GGGAC	3 cut(s)	561, 609, 1086
BsmI	GAATGC	1 cut(s)	479
BsnI	GGCC	1 cut(s)	334
Bso31I	GGTCTC	1 cut(s)	575
Bsp1286I	GDGCHC	3 cut(s)	305, 418, 517
Bsp1407I	TGTACA	1 cut(s)	317
Bsp143I	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
Bsp1720I	GCTNAGC	1 cut(s)	930
BspACI	CCGC	5 cut(s)	359, 524, 528, 591, 593
BspANI	GGCC	1 cut(s)	334
BspCNI	CTCAG	3 cut(s)	113, 161, 1024
BspFNI	CGCG	2 cut(s)	530, 593
BspQI	GCTCTTC	1 cut(s)	330
BspTI	CTTAAG	1 cut(s)	625
BspTNI	GGTCTC	1 cut(s)	575
BsrDI	GCAATG	2 cut(s)	346, 619
BsrGI	TGTACA	1 cut(s)	317
BsrI	ACTGG	2 cut(s)	335, 1060
BssECI	CCNNGG	1 cut(s)	591
BssMI	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
Bst4CI	ACNGT	1 cut(s)	879
Bst6I	CTCTTC	4 cut(s)	24, 330, 550, 752
BstAFI	CTTAAG	1 cut(s)	625
BstAPI	GCANNNNNTGC	1 cut(s)	249
BstAUI	TGTACA	1 cut(s)	317
BstC8I	GCNNGC	1 cut(s)	528
BstDEI	CTNAG	4 cut(s)	100, 148, 930, 1011
BstDSI	CCRYGG	1 cut(s)	591
BstF5I	GGATG	2 cut(s)	517, 1184
BstFNI	CGCG	2 cut(s)	530, 593
BstKTI	GATC	9 cut(s)	214, 315, 397, 430, 499, 742, 855, 865, 1152
BstMAI	GTCTC	5 cut(s)	575, 592, 654, 877, 1051
BstMBI	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
BstMCI	CGRYCG	1 cut(s)	729
BstMWI	GCNNNNNNNGC	2 cut(s)	249, 340
BstSFI	CTRYAG	1 cut(s)	474
BstSLI	GKGCMC	2 cut(s)	418, 517
BstUI	CGCG	2 cut(s)	530, 593
BstV2I	GAAGAC	2 cut(s)	100, 121
BstXI	CCANNNNNNTGG	2 cut(s)	685, 918
BsuI	GTATCC	1 cut(s)	134
BsuRI	GGCC	1 cut(s)	334
BtgI	CCRYGG	1 cut(s)	591
BtsCI	GGATG	2 cut(s)	517, 1184
BtsI	GCAGTG	1 cut(s)	250
BtsIMutI	CAGTG	2 cut(s)	250, 328
Cac8I	GCNNGC	1 cut(s)	528
Cfr13I	GGNCC	1 cut(s)	731
Cfr42I	CCGCGG	1 cut(s)	594
Csp6I	GTAC	2 cut(s)	274, 318
CspCI	CAANNNNNGTGG	2 cut(s)	591, 626
CviAII	CATG	3 cut(s)	463, 690, 1215
CviQI	GTAC	2 cut(s)	274, 318
DdeI	CTNAG	4 cut(s)	100, 148, 930, 1011
DpnI	GATC	9 cut(s)	213, 314, 396, 429, 498, 741, 854, 864, 1151
DpnII	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
DraI	TTTAAA	3 cut(s)	441, 771, 940
Eam1104I	CTCTTC	4 cut(s)	24, 330, 550, 752
EarI	CTCTTC	4 cut(s)	24, 330, 550, 752
EciI	GGCGGA	1 cut(s)	513
Eco31I	GGTCTC	1 cut(s)	575
Eco32I	GATATC	2 cut(s)	6, 1126
Eco47I	GGWCC	1 cut(s)	731
Eco57I	CTGAAG	2 cut(s)	254, 1173
EcoRV	GATATC	2 cut(s)	6, 1126
FaeI	CATG	3 cut(s)	466, 693, 1218
FaqI	GGGAC	3 cut(s)	561, 609, 1086
FatI	CATG	3 cut(s)	462, 689, 1214
FauI	CCCGC	3 cut(s)	366, 535, 586
FbaI	TGATCA	2 cut(s)	394, 496
FokI	GGATG	2 cut(s)	504, 1191
FspBI	CTAG	1 cut(s)	510
GsuI	CTGGAG	1 cut(s)	558
HaeIII	GGCC	1 cut(s)	334
HapII	CCGG	4 cut(s)	120, 204, 729, 798
Hin1II	CATG	3 cut(s)	466, 693, 1218
HindIII	AAGCTT	1 cut(s)	1202
HpaII	CCGG	4 cut(s)	120, 204, 729, 798
HphI	GGTGA	2 cut(s)	867, 982
Hpy166II	GTNNAC	2 cut(s)	416, 515
Hpy188I	TCNGA	7 cut(s)	140, 501, 857, 867, 1121, 1178, 1192
Hpy188III	TCNNGA	5 cut(s)	9, 574, 950, 958, 970
Hpy8I	GTNNAC	2 cut(s)	416, 515
HpyAV	CCTTC	4 cut(s)	88, 105, 684, 877
HpyCH4III	ACNGT	1 cut(s)	879
HpyCH4IV	ACGT	3 cut(s)	126, 1062, 1113
HpyCH4V	TGCA	9 cut(s)	160, 243, 252, 416, 466, 515, 1025, 1135, 1197
HpyF10VI	GCNNNNNNNGC	2 cut(s)	249, 340
HpyF3I	CTNAG	4 cut(s)	100, 148, 930, 1011
HpySE526I	ACGT	3 cut(s)	126, 1062, 1113
Hsp92II	CATG	3 cut(s)	466, 693, 1218
Ksp22I	TGATCA	2 cut(s)	394, 496
KspI	CCGCGG	1 cut(s)	594
Kzo9I	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	2 cut(s)	241, 926
LweI	GCATC	1 cut(s)	223
MaeI	CTAG	1 cut(s)	510
MaeII	ACGT	3 cut(s)	126, 1062, 1113
MaeIII	GTNAC	3 cut(s)	371, 421, 503
MalI	GATC	9 cut(s)	213, 314, 396, 429, 498, 741, 854, 864, 1151
MboI	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
MhlI	GDGCHC	3 cut(s)	305, 418, 517
MluCI	AATT	3 cut(s)	188, 843, 1031
MmeI	TCCRAC	2 cut(s)	595, 1134
MroXI	GAANNNNTTC	1 cut(s)	965
MseI	TTAA	8 cut(s)	155, 384, 440, 626, 770, 780, 846, 939
MslI	CAYNNNNRTG	2 cut(s)	484, 683
MspA1I	CMGCKG	1 cut(s)	593
MspCI	CTTAAG	1 cut(s)	625
MspI	CCGG	4 cut(s)	120, 204, 729, 798
Mva1269I	GAATGC	1 cut(s)	479
MvnI	CGCG	2 cut(s)	530, 593
MwoI	GCNNNNNNNGC	2 cut(s)	249, 340
NdeII	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
NlaIII	CATG	3 cut(s)	466, 693, 1218
NmuCI	GTSAC	1 cut(s)	371
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	1 cut(s)	479
PdmI	GAANNNNTTC	1 cut(s)	965
PspPI	GGNCC	1 cut(s)	731
RsaI	GTAC	2 cut(s)	275, 319
RsaNI	GTAC	2 cut(s)	274, 318
RseI	CAYNNNNRTG	2 cut(s)	484, 683
SacII	CCGCGG	1 cut(s)	594
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	8 cut(s)	155, 384, 440, 626, 770, 780, 846, 939
Sau3AI	GATC	9 cut(s)	211, 312, 394, 427, 496, 739, 852, 862, 1149
Sau96I	GGNCC	1 cut(s)	731
SduI	GDGCHC	3 cut(s)	305, 418, 517
SfaNI	GCATC	1 cut(s)	223
SfcI	CTRYAG	1 cut(s)	474
Sfr303I	CCGCGG	1 cut(s)	594
SgrBI	CCGCGG	1 cut(s)	594
SinI	GGWCC	1 cut(s)	731
SmiMI	CAYNNNNRTG	2 cut(s)	484, 683
SmlI	CTYRAG	2 cut(s)	625, 950
SmoI	CTYRAG	2 cut(s)	625, 950
Sse9I	AATT	3 cut(s)	188, 843, 1031
SsiI	CCGC	5 cut(s)	359, 524, 528, 591, 593
SspMI	CTAG	1 cut(s)	510
TaaI	ACNGT	1 cut(s)	879
TaiI	ACGT	3 cut(s)	129, 1065, 1116
TaqII	GACCGA	1 cut(s)	557
TasI	AATT	3 cut(s)	188, 843, 1031
TatI	WGTACW	2 cut(s)	273, 317
Tru1I	TTAA	8 cut(s)	155, 384, 440, 626, 770, 780, 846, 939
Tru9I	TTAA	8 cut(s)	155, 384, 440, 626, 770, 780, 846, 939
TscAI	CASTG	2 cut(s)	250, 335
TseFI	GTSAC	1 cut(s)	371
Tsp45I	GTSAC	1 cut(s)	371
TspDTI	ATGAA	4 cut(s)	70, 393, 393, 451
TspGWI	ACGGA	1 cut(s)	768
TspRI	CASTG	2 cut(s)	250, 335
Vha464I	CTTAAG	1 cut(s)	625
VneI	GTGCAC	2 cut(s)	414, 513
VpaK11BI	GGWCC	1 cut(s)	731
XmnI	GAANNNNTTC	1 cut(s)	965
XspI	CTAG	1 cut(s)	510

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.