Prupe.1G493500_v2.0.a1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41011738 .. 41015466
3729 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G493500.13

Sequence Viewer

Length: 1359 bp
ATGGGTGGCGATAAAAGGAACAGAGTATTTGCATTGACGGCCTTGCTCATTCTGGGTTTGTCTGTAACCTTCCCATGTTGTTTCTCGGCAGCCAATCAGCCCCAGACCAAGAAAAAATCGGCCCAAGCGAATAAATTTGGTTCTTCAGCTGTTTTTCCTCTTCATGGAAATGTGTATCCTCTTGGGTACTACTCTGTGTCCATCAACATAGGCTACCCAGCCAAGCGCTTCGACCTCGATATTGACACTGGCAGTGACCTCACTTGGGTCCAATGTGATGCTCCTTGTACCGGTTGTACCAAGCAGCCCCGTGAATATCTTTATAAACCCAAAAACAACCATCTGCAATGTGGAGACCCTCTTTGTGTTGCCTTCCACTCACCAGCAAGCGACCCATGCAAGACCCCAGATGATCAATGCGACTATGAGGTTGAATATGCTGATCAAGGATCATCTCTTGGTGTGATGGTCAACGATTACTTCCCCCTGAAGTTCACCAACGGCTCTCAACTTGGTCCTCGTTTGGCCTTTGGGTGTGGATATGATCAAAAATATCCTGGTCCAAACACACCTCCCACCACAGGAGTCATCGGCCTTGGCAAGGGCAAAGCCAGCATTGTGTCACAACTAAGTCGCATGGGTTTAACGCGTAATGTGGTGGGTCACTGTCTAAGTGGGCAAGGAGGAGGATTTCTTTTTCTCGGGGATGATCTTGTCTCTTTTTCTAGGGTCATGTGGACACCAATGTCACGCAATTCCATGGAAAATCACTACTCCTCTGGACCAGCAGAACTTGTATTCAATGGAAAGTCTACCGGTGTTAAGGGGCTTTCTCTTGTTTTTGACAGTGGGAGCTCCTACACTTATTTCAATTCCCAAGCTTACAAGGCTGTAGTTAATCTGGTAAGAAATGATTTAGATGGAAAGCCAATAAAGGAAACAAATGAGGACAAATCCCTTCCAATCTGCTGGAAAGGCCGCAAGCCTTTCAAATCTGTTGGTGACGCGAAGAACTTTTTCAAGCCCTTAGCACTGAGCTTCATTAATGCCAAGAATGTTCAGCTGCAATTATCACCCGAAGATTATCTTATAGTTTCGAAACATGGCAATGTGTGCTTCGGGATTTTGAATGGCTCTGAAGTAGGACTGGAAAATTTGAATATCATCGGAGACATTATGTTGCTAGATAAAATGCTGATATATGACAATGAAAACCAGCGAATTGGATGGGCACCTGCAAATTGCAATAGACTTCCCAATGTGGATCGTGAATACTCTGAAGGTAATTCTCAGCCCATTGTAGCTAATTTGGGTATCTTGGAACAGCGTTGTCCTGCTTATGCTTTGTATGATCAATAA

Protein Analysis

453

Amino Acids

49.4

Weight (kDa)

7.81

Isoelectric Point (pI)

32.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 324
AarI CACCTGC 1 cut(s) 1243
AasI GACNNNNNNGTC 1 cut(s) 745
Acc36I ACCTGC 1 cut(s) 1243
AccB1I GGYRCC 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 812
AccII CGCG 2 cut(s) 649, 1007
AciI CCGC 1 cut(s) 979
AclWI GGATC 2 cut(s) 457, 1272
AcsI RAATTY 2 cut(s) 134, 1153
AcuI CTGAAG 4 cut(s) 129, 509, 1158, 1299
AfaI GTAC 3 cut(s) 188, 289, 298
AfeI AGCGCT 1 cut(s) 227
AfiI CCNNNNNNNGG 5 cut(s) 164, 265, 290, 581, 601
AflIII ACRYGT 1 cut(s) 647
AgeI ACCGGT 2 cut(s) 290, 815
AgsI TTSAA 7 cut(s) 434, 802, 871, 991, 1021, 1129, 1159
AjnI CCWGG 1 cut(s) 556
AluBI AGCT 6 cut(s) 149, 855, 881, 1038, 1063, 1304
AluI AGCT 6 cut(s) 149, 855, 881, 1038, 1063, 1304
Alw21I GWGCWC 1 cut(s) 857
Alw26I GTCTC 3 cut(s) 348, 721, 1164
AlwI GGATC 2 cut(s) 457, 1272
Ama87I CYCGRG 1 cut(s) 701
Aor51HI AGCGCT 1 cut(s) 227
AoxI GGCC 5 cut(s) 39, 120, 525, 592, 976
ApeKI GCWGC 3 cut(s) 89, 304, 1063
ApoI RAATTY 2 cut(s) 134, 1153
AseI ATTAAT 1 cut(s) 1044
AsiGI ACCGGT 2 cut(s) 290, 815
Asp700I GAANNNNTTC 1 cut(s) 1016
AspLEI GCGC 1 cut(s) 228
AspS9I GGNCC 5 cut(s) 121, 268, 515, 560, 782
AsuHPI GGTGA 4 cut(s) 372, 487, 1013, 1065
AsuII TTCGAA 1 cut(s) 1097
AvaI CYCGRG 1 cut(s) 701
AvaII GGWCC 4 cut(s) 268, 515, 560, 782
BaeGI GKGCMC 1 cut(s) 1234
BanI GGYRCC 1 cut(s) 1231
BanII GRGCYC 1 cut(s) 857
Bbv12I GWGCWC 1 cut(s) 857
BbvI GCAGC 3 cut(s) 101, 316, 1050
BccI CCATC 5 cut(s) 209, 348, 460, 914, 1221
BceAI ACGGC 2 cut(s) 54, 517
BciT130I CCWGG 1 cut(s) 558
BciVI GTATCC 1 cut(s) 186
BclI TGATCA 4 cut(s) 412, 442, 544, 1351
BcoDI GTCTC 3 cut(s) 348, 721, 1164
BfaI CTAG 2 cut(s) 726, 1184
BfmI CTRYAG 1 cut(s) 891
BfoI RGCGCY 1 cut(s) 229
BfuAI ACCTGC 1 cut(s) 1243
BfuI GTATCC 1 cut(s) 186
BisI GCNGC 4 cut(s) 90, 305, 979, 1064
BlsI GCNGC 4 cut(s) 91, 306, 980, 1065
Bme1390I CCNGG 1 cut(s) 558
Bme18I GGWCC 4 cut(s) 268, 515, 560, 782
BmeT110I CYCGRG 1 cut(s) 701
BmgT120I GGNCC 5 cut(s) 121, 268, 515, 560, 782
BmiI GGNNCC 2 cut(s) 269, 1233
BmrFI CCNGG 1 cut(s) 558
BmsI GCATC 1 cut(s) 268
Bpu10I CCTNAGC 1 cut(s) 1027
Bpu14I TTCGAA 1 cut(s) 1097
BsaI GGTCTC 1 cut(s) 348
BsaJI CCNNGG 2 cut(s) 595, 759
BsaWI WCCGGW 2 cut(s) 290, 815
Bsc4I CCNNNNNNNGG 5 cut(s) 164, 265, 290, 581, 601
Bse118I RCCGGY 2 cut(s) 290, 815
Bse1I ACTGG 2 cut(s) 253, 1152
Bse3DI GCAATG 2 cut(s) 353, 1114
BseBI CCWGG 1 cut(s) 558
BseDI CCNNGG 2 cut(s) 595, 759
BseGI GGATG 2 cut(s) 712, 1232
BseLI CCNNNNNNNGG 5 cut(s) 164, 265, 290, 581, 601
BseMI GCAATG 2 cut(s) 353, 1114
BseMII CTCAG 2 cut(s) 1025, 1304
BseNI ACTGG 2 cut(s) 253, 1152
BseRI GAGGAG 2 cut(s) 699, 766
BseSI GKGCMC 1 cut(s) 1234
BseXI GCAGC 3 cut(s) 101, 316, 1050
BseYI CCCAGC 1 cut(s) 217
Bsh1236I CGCG 2 cut(s) 649, 1007
BshFI GGCC 5 cut(s) 41, 122, 527, 594, 978
BshNI GGYRCC 1 cut(s) 1231
BshTI ACCGGT 2 cut(s) 290, 815
BsiHKAI GWGCWC 1 cut(s) 857
BsiHKCI CYCGRG 1 cut(s) 701
BsiSI CCGG 2 cut(s) 291, 816
BslI CCNNNNNNNGG 5 cut(s) 164, 265, 290, 581, 601
BsmAI GTCTC 3 cut(s) 348, 721, 1164
BsnI GGCC 5 cut(s) 41, 122, 527, 594, 978
Bso31I GGTCTC 1 cut(s) 348
BsoBI CYCGRG 1 cut(s) 701
Bsp119I TTCGAA 1 cut(s) 1097
Bsp1286I GDGCHC 2 cut(s) 857, 1234
Bsp143I GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
Bsp19I CCATGG 1 cut(s) 759
BspACI CCGC 1 cut(s) 979
BspANI GGCC 5 cut(s) 41, 122, 527, 594, 978
BspCNI CTCAG 2 cut(s) 1026, 1303
BspFNI CGCG 2 cut(s) 649, 1007
BspLI GGNNCC 2 cut(s) 269, 1233
BspMI ACCTGC 1 cut(s) 1243
BspPI GGATC 2 cut(s) 457, 1272
BspT104I TTCGAA 1 cut(s) 1097
BspT107I GGYRCC 1 cut(s) 1231
BspTNI GGTCTC 1 cut(s) 348
BsrDI GCAATG 2 cut(s) 353, 1114
BsrFI RCCGGY 2 cut(s) 290, 815
BsrI ACTGG 2 cut(s) 253, 1152
BssAI RCCGGY 2 cut(s) 290, 815
BssECI CCNNGG 2 cut(s) 595, 759
BssMI GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
BssT1I CCWWGG 2 cut(s) 595, 759
Bst2UI CCWGG 1 cut(s) 558
Bst4CI ACNGT 2 cut(s) 668, 848
Bst6I CTCTTC 1 cut(s) 165
BstAPI GCANNNNNTGC 1 cut(s) 1113
BstBI TTCGAA 1 cut(s) 1097
BstC8I GCNNGC 3 cut(s) 388, 613, 983
BstDEI CTNAG 5 cut(s) 629, 671, 1027, 1034, 1290
BstDSI CCRYGG 1 cut(s) 759
BstENI CCTNNNNNAGG 1 cut(s) 599
BstF5I GGATG 2 cut(s) 712, 1232
BstFNI CGCG 2 cut(s) 649, 1007
BstH2I RGCGCY 1 cut(s) 229
BstHHI GCGC 1 cut(s) 228
BstKTI GATC 7 cut(s) 415, 445, 452, 547, 712, 1267, 1354
BstMAI GTCTC 3 cut(s) 348, 721, 1164
BstMBI GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
BstMWI GCNNNNNNNGC 6 cut(s) 38, 396, 612, 887, 975, 1113
BstNI CCWGG 1 cut(s) 558
BstSCI CCNGG 1 cut(s) 556
BstSFI CTRYAG 1 cut(s) 891
BstSLI GKGCMC 1 cut(s) 1234
BstUI CGCG 2 cut(s) 649, 1007
BstV1I GCAGC 3 cut(s) 101, 316, 1050
BstXI CCANNNNNNTGG 2 cut(s) 969, 1223
BsuI GTATCC 1 cut(s) 186
BsuRI GGCC 5 cut(s) 41, 122, 527, 594, 978
BtgI CCRYGG 1 cut(s) 759
BtsCI GGATG 2 cut(s) 712, 1232
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 5 cut(s) 246, 259, 664, 853, 1031
BveI ACCTGC 1 cut(s) 1243
Cac8I GCNNGC 3 cut(s) 388, 613, 983
CfoI GCGC 1 cut(s) 228
Cfr10I RCCGGY 2 cut(s) 290, 815
Cfr13I GGNCC 5 cut(s) 121, 268, 515, 560, 782
CseI GACGC 1 cut(s) 1013
Csp6I GTAC 3 cut(s) 187, 288, 297
CspAI ACCGGT 2 cut(s) 290, 815
CviAII CATG 7 cut(s) 75, 164, 396, 637, 733, 760, 1103
CviQI GTAC 3 cut(s) 187, 288, 297
DdeI CTNAG 5 cut(s) 629, 671, 1027, 1034, 1290
DpnI GATC 7 cut(s) 414, 444, 451, 546, 711, 1266, 1353
DpnII GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
DrdI GACNNNNNNGTC 1 cut(s) 745
DseDI GACNNNNNNGTC 1 cut(s) 745
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Ecl136II GAGCTC 1 cut(s) 855
Eco130I CCWWGG 2 cut(s) 595, 759
Eco24I GRGCYC 1 cut(s) 857
Eco31I GGTCTC 1 cut(s) 348
Eco47I GGWCC 4 cut(s) 268, 515, 560, 782
Eco47III AGCGCT 1 cut(s) 227
Eco53kI GAGCTC 1 cut(s) 855
Eco57I CTGAAG 4 cut(s) 129, 509, 1158, 1299
Eco88I CYCGRG 1 cut(s) 701
EcoICRI GAGCTC 1 cut(s) 855
EcoNI CCTNNNNNAGG 1 cut(s) 599
EcoRII CCWGG 1 cut(s) 556
EcoT14I CCWWGG 2 cut(s) 595, 759
EcoT38I GRGCYC 1 cut(s) 857
ErhI CCWWGG 2 cut(s) 595, 759
FaeI CATG 7 cut(s) 78, 167, 399, 640, 736, 763, 1106
FalI AAGNNNNNCTT 2 cut(s) 1071, 1103
FatI CATG 7 cut(s) 74, 163, 395, 636, 732, 759, 1102
FbaI TGATCA 4 cut(s) 412, 442, 544, 1351
FblI GTMKAC 1 cut(s) 812
Fnu4HI GCNGC 4 cut(s) 90, 305, 979, 1064
FokI GGATG 2 cut(s) 719, 1239
FriOI GRGCYC 1 cut(s) 857
Fsp4HI GCNGC 4 cut(s) 90, 305, 979, 1064
FspBI CTAG 2 cut(s) 726, 1184
GlaI GCGC 1 cut(s) 227
GluI GCNGC 4 cut(s) 90, 305, 979, 1064
GsaI CCCAGC 1 cut(s) 221
HaeII RGCGCY 1 cut(s) 229
HaeIII GGCC 5 cut(s) 41, 122, 527, 594, 978
HapII CCGG 2 cut(s) 291, 816
HgaI GACGC 1 cut(s) 1013
HhaI GCGC 1 cut(s) 228
Hin1II CATG 7 cut(s) 78, 167, 399, 640, 736, 763, 1106
Hin6I GCGC 1 cut(s) 226
HinP1I GCGC 1 cut(s) 226
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HindIII AAGCTT 1 cut(s) 879
HinfI GANTC 1 cut(s) 585
HpaII CCGG 2 cut(s) 291, 816
HphI GGTGA 4 cut(s) 372, 487, 1013, 1065
Hpy166II GTNNAC 4 cut(s) 472, 495, 738, 813
Hpy188I TCNGA 3 cut(s) 1138, 1169, 1279
Hpy188III TCNNGA 3 cut(s) 780, 1120, 1268
Hpy8I GTNNAC 4 cut(s) 472, 495, 738, 813
HpyAV CCTTC 4 cut(s) 79, 382, 968, 1274
HpyCH4III ACNGT 2 cut(s) 668, 848
HpyCH4V TGCA 6 cut(s) 32, 346, 399, 1066, 1238, 1245
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 396, 612, 887, 975, 1113
HpyF3I CTNAG 5 cut(s) 629, 671, 1027, 1034, 1290
Hsp92II CATG 7 cut(s) 78, 167, 399, 640, 736, 763, 1106
HspAI GCGC 1 cut(s) 226
Ksp22I TGATCA 4 cut(s) 412, 442, 544, 1351
Kzo9I GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
LmnI GCTCC 3 cut(s) 286, 852, 860
Lsp1109I GCAGC 3 cut(s) 101, 316, 1050
LweI GCATC 1 cut(s) 268
MaeI CTAG 2 cut(s) 726, 1184
MaeIII GTNAC 6 cut(s) 64, 254, 621, 662, 747, 1001
MalI GATC 7 cut(s) 414, 444, 451, 546, 711, 1266, 1353
MboI GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
MboII GAAGA 4 cut(s) 135, 152, 1021, 1091
MhlI GDGCHC 2 cut(s) 857, 1234
MluCI AATT 9 cut(s) 134, 754, 871, 1067, 1153, 1221, 1240, 1285, 1306
MluI ACGCGT 1 cut(s) 647
MlyI GAGTC 1 cut(s) 594
MroXI GAANNNNTTC 1 cut(s) 1016
MseI TTAA 4 cut(s) 644, 822, 897, 1044
MslI CAYNNNNRTG 2 cut(s) 168, 1107
MspA1I CMGCKG 2 cut(s) 149, 1063
MspI CCGG 2 cut(s) 291, 816
MspR9I CCNGG 1 cut(s) 558
MvaI CCWGG 1 cut(s) 558
MvnI CGCG 2 cut(s) 649, 1007
MwoI GCNNNNNNNGC 6 cut(s) 38, 396, 612, 887, 975, 1113
NcoI CCATGG 1 cut(s) 759
NdeII GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
NlaIII CATG 7 cut(s) 78, 167, 399, 640, 736, 763, 1106
NlaIV GGNNCC 2 cut(s) 269, 1233
NmeAIII GCCGAG 1 cut(s) 65
NmuCI GTSAC 5 cut(s) 254, 621, 662, 747, 1001
NspV TTCGAA 1 cut(s) 1097
PaqCI CACCTGC 1 cut(s) 1243
PcsI WCGNNNNNNNCGW 1 cut(s) 125
PdmI GAANNNNTTC 1 cut(s) 1016
PinAI ACCGGT 2 cut(s) 290, 815
PkrI GCNGC 4 cut(s) 91, 306, 980, 1065
PleI GAGTC 1 cut(s) 593
PpsI GAGTC 1 cut(s) 593
PshBI ATTAAT 1 cut(s) 1044
PsiI TTATAA 1 cut(s) 324
Psp124BI GAGCTC 1 cut(s) 857
Psp6I CCWGG 1 cut(s) 556
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 1 cut(s) 556
PspN4I GGNNCC 2 cut(s) 269, 1233
PspPI GGNCC 5 cut(s) 121, 268, 515, 560, 782
PvuII CAGCTG 2 cut(s) 149, 1063
RsaI GTAC 3 cut(s) 188, 289, 298
RsaNI GTAC 3 cut(s) 187, 288, 297
RseI CAYNNNNRTG 2 cut(s) 168, 1107
SacI GAGCTC 1 cut(s) 857
SaqAI TTAA 4 cut(s) 644, 822, 897, 1044
SatI GCNGC 4 cut(s) 90, 305, 979, 1064
Sau3AI GATC 7 cut(s) 412, 442, 449, 544, 709, 1264, 1351
Sau96I GGNCC 5 cut(s) 121, 268, 515, 560, 782
SchI GAGTC 1 cut(s) 594
ScrFI CCNGG 1 cut(s) 558
SduI GDGCHC 2 cut(s) 857, 1234
SfaNI GCATC 1 cut(s) 268
SfcI CTRYAG 1 cut(s) 891
SfuI TTCGAA 1 cut(s) 1097
SinI GGWCC 4 cut(s) 268, 515, 560, 782
SmiMI CAYNNNNRTG 2 cut(s) 168, 1107
Sse9I AATT 9 cut(s) 134, 754, 871, 1067, 1153, 1221, 1240, 1285, 1306
SsiI CCGC 1 cut(s) 979
SspMI CTAG 2 cut(s) 726, 1184
SstI GAGCTC 1 cut(s) 857
StyD4I CCNGG 1 cut(s) 556
StyI CCWWGG 2 cut(s) 595, 759
TaaI ACNGT 2 cut(s) 668, 848
TaqI TCGA 3 cut(s) 231, 237, 1097
TasI AATT 9 cut(s) 134, 754, 871, 1067, 1153, 1221, 1240, 1285, 1306
TauI GCSGC 1 cut(s) 981
Tru1I TTAA 4 cut(s) 644, 822, 897, 1044
Tru9I TTAA 4 cut(s) 644, 822, 897, 1044
TscAI CASTG 5 cut(s) 253, 259, 671, 853, 1038
TseFI GTSAC 5 cut(s) 254, 621, 662, 747, 1001
TseI GCWGC 3 cut(s) 89, 304, 1063
Tsp45I GTSAC 5 cut(s) 254, 621, 662, 747, 1001
TspDTI ATGAA 3 cut(s) 152, 1030, 1224
TspRI CASTG 5 cut(s) 253, 259, 671, 853, 1038
VpaK11BI GGWCC 4 cut(s) 268, 515, 560, 782
VspI ATTAAT 1 cut(s) 1044
XagI CCTNNNNNAGG 1 cut(s) 599
XapI RAATTY 2 cut(s) 134, 1153
XcmI CCANNNNNNNNNTGG 1 cut(s) 347
XmiI GTMKAC 1 cut(s) 812
XmnI GAANNNNTTC 1 cut(s) 1016
XspI CTAG 2 cut(s) 726, 1184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.