Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0003331

Physical Location & Seq

Genomic Coordinates Forward (+)

5816770 .. 5818467

Gene Structure 1698 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G031200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGTTCTCACACTCCAATAAGCTTCCAGAAGGAGCAAAAAAGAAACCTGTCATGTCAGTAGCCAGCAACCCTGGGAACTTTGTGATGGGGAAAAGATGTGTGGCACTTGTGCATGTGCATTTGCAGCCTCGCGAGCATCTTTATAGACCCAACAATAATCTTCTGCAGTGCGAAGACCTTCTTTGCACCGCATTCCACTCACCAGCAAGCCACCCATGTCAATATGCTGATCGTGGATCATCTCTTGGTGTGCTGGTCAAGGATTACTTTCCCCTGAAATTCACCAATGGCTCTCTCCTCAGTCCCCATTTGGCCTTTGGGTGTGGATATGATCAAAAGTATTTTGGTCCGGTCACACCTGCCACCGCCGGAGTCATTGGCCTTGGTAATGGAAAAGTCAGTATTCTGTCACAACTAAGTCGCCTAGGTCTAACAAGAAATGTTGTCGGCCATTGTCTAAGTGGGCAAGGTGGAGGATTTGTTTTCTTTGGGGATGATCTTGTCCCTTCATTAGGAGTCGTATGGACATCAATGCCTCCCAATTCCATGGGGAAACGCTACTCATGTGGACCAGCAGAACTTGTGTTTGATGGAAAGGCTACCAGTGTAAAGGGACTTAACATGATTTTTGACAGTGGGAGCTCCTACACTTACTTCAATTCCCAAGCTTATCAGGCAATAGTTACTCTGGTGAGAAATGATTTAAAAGGAAAGCCTCTAAAGGATGCAACTGAGGATCAATCCCTCCCAATCTGCTGGAAAGGCAGAAAACCATTCAAATTTGTTCGTGACGCAAAGAACTATTTTAAGCCCTTAGCACTGAGCTTTACTAATGCCAAGAATGTTCAGCCGCAATTATCACCTGAAACTTATCTTATAGTTACAAAACATGGCAATGTGTGCTTGGGGATTCTGAATGGCACTGAAGTAGGACTAGGAAATCTGAATATCATTGGAGATATCACTTTGCGAGATAAAATGTTGATATATGACAATGAGAACCGGCAAATTGGATGGGCTCCTGTAAATTGCAATATGCTTCCCAAGTCCCGAACCGTTGCCATAATTGCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

359

Amino Acids

39.04

Weight (kDa)

9.38

Isoelectric Point (pI)

35.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44130 AT1G77480 AT1G77480
fragaria_vesca	FvH4_2g27390 FvH4_2g27390 FvH4_2g27390
malus_domestica	MD15G1345400.v1.1
prunus_persica	Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.1G493500_v2.0.a1 Prupe.7G031200_v2.0.a1
pyrus_communis	pycom15g30990
rosa_chinensis	RchiOBHm_Chr6g0296231
rosa_laevigata	RLG00000011715
rosa_roxburghii	Rroxscaffold_7G00171720 Rroxscaffold_7G00178340
rosa_rugosa	Rorug06G0259700.1 Rorug06G0259800.1
rosa_samantha	Rh6AG371900 Rh6BG379800 Rh6CG385200 Rh6DG372400
rosa_wichuraiana	Rw6G032410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	367
Acc36I	ACCTGC	1 cut(s)	367
AccII	CGCG	1 cut(s)	132
AciI	CCGC	3 cut(s)	189, 366, 851
AclWI	GGATC	2 cut(s)	244, 744
AcoI	YGGCCR	1 cut(s)	448
AcsI	RAATTY	2 cut(s)	278, 779
AcuI	CTGAAG	1 cut(s)	945
AfiI	CCNNNNNNNGG	1 cut(s)	512
AgsI	TTSAA	2 cut(s)	658, 778
AjnI	CCWGG	1 cut(s)	70
AluBI	AGCT	4 cut(s)	22, 642, 668, 825
AluI	AGCT	4 cut(s)	22, 642, 668, 825
Alw21I	GWGCWC	1 cut(s)	644
AlwI	GGATC	2 cut(s)	244, 744
AoxI	GGCC	3 cut(s)	312, 379, 448
ApeKI	GCWGC	1 cut(s)	124
ApoI	RAATTY	2 cut(s)	278, 779
Asp700I	GAANNNNTTC	1 cut(s)	177
AspA2I	CCTAGG	1 cut(s)	424
AspS9I	GGNCC	2 cut(s)	347, 569
AsuHPI	GGTGA	4 cut(s)	192, 274, 703, 852
AvaII	GGWCC	2 cut(s)	347, 569
AvrII	CCTAGG	1 cut(s)	424
BanII	GRGCYC	2 cut(s)	644, 1021
BbsI	GAAGAC	1 cut(s)	180
Bbv12I	GWGCWC	1 cut(s)	644
BbvI	GCAGC	1 cut(s)	136
BccI	CCATC	3 cut(s)	79, 584, 1008
BciT130I	CCWGG	1 cut(s)	72
BclI	TGATCA	1 cut(s)	331
BfaI	CTAG	2 cut(s)	425, 935
BfmI	CTRYAG	1 cut(s)	164
BfuAI	ACCTGC	1 cut(s)	367
BisI	GCNGC	2 cut(s)	125, 851
BlnI	CCTAGG	1 cut(s)	424
BlsI	GCNGC	2 cut(s)	126, 852
Bme1390I	CCNGG	1 cut(s)	72
Bme18I	GGWCC	2 cut(s)	347, 569
BmgT120I	GGNCC	2 cut(s)	347, 569
BmiI	GGNNCC	1 cut(s)	1020
BmrFI	CCNGG	1 cut(s)	72
BmsI	GCATC	2 cut(s)	145, 715
BpiI	GAAGAC	1 cut(s)	180
Bpu10I	CCTNAGC	1 cut(s)	814
BsaJI	CCNNGG	5 cut(s)	70, 71, 382, 424, 546
BsaWI	WCCGGW	1 cut(s)	349
BsaXI	ACNNNNNCTCC	2 cut(s)	465, 495
Bsc4I	CCNNNNNNNGG	1 cut(s)	512
Bse118I	RCCGGY	1 cut(s)	1002
Bse1I	ACTGG	1 cut(s)	603
Bse3DI	GCAATG	1 cut(s)	901
BseBI	CCWGG	1 cut(s)	72
BseDI	CCNNGG	5 cut(s)	70, 71, 382, 424, 546
BseGI	GGATG	3 cut(s)	499, 730, 1019
BseLI	CCNNNNNNNGG	1 cut(s)	512
BseMI	GCAATG	1 cut(s)	901
BseMII	CTCAG	3 cut(s)	313, 723, 812
BseNI	ACTGG	1 cut(s)	603
BseRI	GAGGAG	1 cut(s)	287
BseXI	GCAGC	1 cut(s)	136
Bsh1236I	CGCG	1 cut(s)	132
BshFI	GGCC	3 cut(s)	314, 381, 450
BsiHKAI	GWGCWC	1 cut(s)	644
BsiSI	CCGG	3 cut(s)	350, 369, 1003
BslFI	GGGAC	4 cut(s)	288, 488, 627, 1033
BslI	CCNNNNNNNGG	1 cut(s)	512
BsmFI	GGGAC	4 cut(s)	288, 488, 627, 1033
BsmI	GAATGC	1 cut(s)	191
BsnI	GGCC	3 cut(s)	314, 381, 450
Bsp1286I	GDGCHC	2 cut(s)	644, 1021
Bsp143I	GATC	5 cut(s)	229, 236, 331, 496, 736
Bsp19I	CCATGG	1 cut(s)	546
Bsp68I	TCGCGA	1 cut(s)	132
BspACI	CCGC	3 cut(s)	189, 366, 851
BspANI	GGCC	3 cut(s)	314, 381, 450
BspCNI	CTCAG	3 cut(s)	312, 724, 813
BspFNI	CGCG	1 cut(s)	132
BspLI	GGNNCC	1 cut(s)	1020
BspMAI	CTGCAG	1 cut(s)	168
BspMI	ACCTGC	1 cut(s)	367
BspPI	GGATC	2 cut(s)	244, 744
BsrDI	GCAATG	1 cut(s)	901
BsrFI	RCCGGY	1 cut(s)	1002
BsrI	ACTGG	1 cut(s)	603
BssAI	RCCGGY	1 cut(s)	1002
BssECI	CCNNGG	5 cut(s)	70, 71, 382, 424, 546
BssMI	GATC	5 cut(s)	229, 236, 331, 496, 736
BssT1I	CCWWGG	3 cut(s)	382, 424, 546
Bst2UI	CCWGG	1 cut(s)	72
Bst4CI	ACNGT	2 cut(s)	635, 1057
BstAPI	GCANNNNNTGC	1 cut(s)	900
BstC8I	GCNNGC	3 cut(s)	64, 134, 208
BstDEI	CTNAG	6 cut(s)	299, 416, 458, 732, 814, 821
BstDSI	CCRYGG	1 cut(s)	546
BstENI	CCTNNNNNAGG	1 cut(s)	510
BstF5I	GGATG	3 cut(s)	499, 730, 1019
BstFNI	CGCG	1 cut(s)	132
BstKTI	GATC	5 cut(s)	232, 239, 334, 499, 739
BstMBI	GATC	5 cut(s)	229, 236, 331, 496, 736
BstMWI	GCNNNNNNNGC	6 cut(s)	124, 133, 674, 762, 900, 1067
BstNI	CCWGG	1 cut(s)	72
BstNSI	RCATGY	1 cut(s)	116
BstSCI	CCNGG	1 cut(s)	70
BstSFI	CTRYAG	1 cut(s)	164
BstUI	CGCG	1 cut(s)	132
BstV1I	GCAGC	1 cut(s)	136
BstV2I	GAAGAC	1 cut(s)	180
BstXI	CCANNNNNNTGG	2 cut(s)	547, 756
BsuRI	GGCC	3 cut(s)	314, 381, 450
BtgI	CCRYGG	1 cut(s)	546
BtsCI	GGATG	3 cut(s)	499, 730, 1019
BtsI	GCAGTG	1 cut(s)	173
BtsIMutI	CAGTG	5 cut(s)	173, 610, 640, 818, 921
BtuMI	TCGCGA	1 cut(s)	132
BveI	ACCTGC	1 cut(s)	367
Cac8I	GCNNGC	3 cut(s)	64, 134, 208
Cfr10I	RCCGGY	1 cut(s)	1002
Cfr13I	GGNCC	2 cut(s)	347, 569
CseI	GACGC	1 cut(s)	800
CviAII	CATG	7 cut(s)	52, 113, 216, 547, 564, 622, 890
DdeI	CTNAG	6 cut(s)	299, 416, 458, 732, 814, 821
DpnI	GATC	5 cut(s)	231, 238, 333, 498, 738
DpnII	GATC	5 cut(s)	229, 236, 331, 496, 736
DraI	TTTAAA	1 cut(s)	705
EaeI	YGGCCR	1 cut(s)	448
Ecl136II	GAGCTC	1 cut(s)	642
Eco130I	CCWWGG	3 cut(s)	382, 424, 546
Eco24I	GRGCYC	2 cut(s)	644, 1021
Eco32I	GATATC	1 cut(s)	961
Eco47I	GGWCC	2 cut(s)	347, 569
Eco53kI	GAGCTC	1 cut(s)	642
Eco57I	CTGAAG	1 cut(s)	945
EcoICRI	GAGCTC	1 cut(s)	642
EcoNI	CCTNNNNNAGG	1 cut(s)	510
EcoRII	CCWGG	1 cut(s)	70
EcoRV	GATATC	1 cut(s)	961
EcoT14I	CCWWGG	3 cut(s)	382, 424, 546
EcoT38I	GRGCYC	2 cut(s)	644, 1021
ErhI	CCWWGG	3 cut(s)	382, 424, 546
FaeI	CATG	7 cut(s)	55, 116, 219, 550, 567, 625, 893
FalI	AAGNNNNNCTT	4 cut(s)	165, 197, 251, 283
FaqI	GGGAC	4 cut(s)	288, 488, 627, 1033
FatI	CATG	7 cut(s)	51, 112, 215, 546, 563, 621, 889
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	2 cut(s)	125, 851
FokI	GGATG	3 cut(s)	506, 737, 1026
FriOI	GRGCYC	2 cut(s)	644, 1021
Fsp4HI	GCNGC	2 cut(s)	125, 851
FspBI	CTAG	2 cut(s)	425, 935
GluI	GCNGC	2 cut(s)	125, 851
HaeIII	GGCC	3 cut(s)	314, 381, 450
HapII	CCGG	3 cut(s)	350, 369, 1003
HgaI	GACGC	1 cut(s)	800
Hin1II	CATG	7 cut(s)	55, 116, 219, 550, 567, 625, 893
HindIII	AAGCTT	2 cut(s)	20, 666
HinfI	GANTC	3 cut(s)	372, 516, 910
HpaII	CCGG	3 cut(s)	350, 369, 1003
HphI	GGTGA	4 cut(s)	192, 274, 703, 852
Hpy166II	GTNNAC	1 cut(s)	569
Hpy188I	TCNGA	2 cut(s)	915, 945
Hpy188III	TCNNGA	4 cut(s)	26, 131, 788, 1050
Hpy8I	GTNNAC	1 cut(s)	569
HpyAV	CCTTC	3 cut(s)	23, 188, 516
HpyCH4III	ACNGT	2 cut(s)	635, 1057
HpyCH4V	TGCA	8 cut(s)	112, 118, 124, 166, 186, 728, 1032, 1070
HpyF10VI	GCNNNNNNNGC	6 cut(s)	124, 133, 674, 762, 900, 1067
HpyF3I	CTNAG	6 cut(s)	299, 416, 458, 732, 814, 821
Hsp92II	CATG	7 cut(s)	55, 116, 219, 550, 567, 625, 893
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	5 cut(s)	229, 236, 331, 496, 736
LmnI	GCTCC	4 cut(s)	32, 639, 647, 1024
Lsp1109I	GCAGC	1 cut(s)	136
LweI	GCATC	2 cut(s)	145, 715
MaeI	CTAG	2 cut(s)	425, 935
MaeIII	GTNAC	5 cut(s)	352, 408, 682, 788, 880
MalI	GATC	5 cut(s)	231, 238, 333, 498, 738
MboI	GATC	5 cut(s)	229, 236, 331, 496, 736
MboII	GAAGA	2 cut(s)	152, 185
MhlI	GDGCHC	2 cut(s)	644, 1021
MluCI	AATT	8 cut(s)	278, 541, 658, 779, 854, 1008, 1027, 1065
MlyI	GAGTC	2 cut(s)	381, 525
MnlI	CCTC	7 cut(s)	138, 308, 467, 546, 726, 727, 755
MroXI	GAANNNNTTC	1 cut(s)	177
MseI	TTAA	3 cut(s)	618, 704, 807
MslI	CAYNNNNRTG	1 cut(s)	894
MspI	CCGG	3 cut(s)	350, 369, 1003
MspR9I	CCNGG	1 cut(s)	72
Mva1269I	GAATGC	1 cut(s)	191
MvaI	CCWGG	1 cut(s)	72
MvnI	CGCG	1 cut(s)	132
MwoI	GCNNNNNNNGC	6 cut(s)	124, 133, 674, 762, 900, 1067
NcoI	CCATGG	1 cut(s)	546
NdeII	GATC	5 cut(s)	229, 236, 331, 496, 736
NlaIII	CATG	7 cut(s)	55, 116, 219, 550, 567, 625, 893
NlaIV	GGNNCC	1 cut(s)	1020
NmuCI	GTSAC	3 cut(s)	352, 408, 788
NruI	TCGCGA	1 cut(s)	132
NspI	RCATGY	1 cut(s)	116
PaqCI	CACCTGC	1 cut(s)	367
PasI	CCCWGGG	1 cut(s)	71
PctI	GAATGC	1 cut(s)	191
PdmI	GAANNNNTTC	1 cut(s)	177
PfeI	GAWTC	1 cut(s)	910
PkrI	GCNGC	2 cut(s)	126, 852
PleI	GAGTC	2 cut(s)	380, 524
PpsI	GAGTC	2 cut(s)	380, 524
Psp124BI	GAGCTC	1 cut(s)	644
Psp6I	CCWGG	1 cut(s)	70
PspGI	CCWGG	1 cut(s)	70
PspN4I	GGNNCC	1 cut(s)	1020
PspPI	GGNCC	2 cut(s)	347, 569
PstI	CTGCAG	1 cut(s)	168
RruI	TCGCGA	1 cut(s)	132
RseI	CAYNNNNRTG	1 cut(s)	894
SacI	GAGCTC	1 cut(s)	644
SaqAI	TTAA	3 cut(s)	618, 704, 807
SatI	GCNGC	2 cut(s)	125, 851
Sau3AI	GATC	5 cut(s)	229, 236, 331, 496, 736
Sau96I	GGNCC	2 cut(s)	347, 569
SchI	GAGTC	2 cut(s)	381, 525
ScrFI	CCNGG	1 cut(s)	72
SduI	GDGCHC	2 cut(s)	644, 1021
SfaNI	GCATC	2 cut(s)	145, 715
SfcI	CTRYAG	1 cut(s)	164
SinI	GGWCC	2 cut(s)	347, 569
SmiMI	CAYNNNNRTG	1 cut(s)	894
Sse9I	AATT	8 cut(s)	278, 541, 658, 779, 854, 1008, 1027, 1065
SsiI	CCGC	3 cut(s)	189, 366, 851
SspMI	CTAG	2 cut(s)	425, 935
SstI	GAGCTC	1 cut(s)	644
StyD4I	CCNGG	1 cut(s)	70
StyI	CCWWGG	3 cut(s)	382, 424, 546
TaaI	ACNGT	2 cut(s)	635, 1057
TasI	AATT	8 cut(s)	278, 541, 658, 779, 854, 1008, 1027, 1065
TauI	GCSGC	1 cut(s)	853
TfiI	GAWTC	1 cut(s)	910
Tru1I	TTAA	3 cut(s)	618, 704, 807
Tru9I	TTAA	3 cut(s)	618, 704, 807
TscAI	CASTG	5 cut(s)	173, 610, 640, 825, 928
TseFI	GTSAC	3 cut(s)	352, 408, 788
TseI	GCWGC	1 cut(s)	124
Tsp45I	GTSAC	3 cut(s)	352, 408, 788
TspDTI	ATGAA	1 cut(s)	498
TspRI	CASTG	5 cut(s)	173, 610, 640, 825, 928
VpaK11BI	GGWCC	2 cut(s)	347, 569
XagI	CCTNNNNNAGG	1 cut(s)	510
XapI	RAATTY	2 cut(s)	278, 779
XceI	RCATGY	1 cut(s)	116
XcmI	CCANNNNNNNNNTGG	2 cut(s)	314, 458
XmaJI	CCTAGG	1 cut(s)	424
XmnI	GAANNNNTTC	1 cut(s)	177
XspI	CTAG	2 cut(s)	425, 935

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.