Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015112

Physical Location & Seq

Genomic Coordinates Reverse (-)

21984428 .. 21990286

Gene Structure 5859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G59760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2967 bp

ATGGGTTCCGTGAAGAGAAAATCAGTGGAGGAATCTTCTGATTCTGCTCCGCCGCAAAAGGTTCAGAGAGAAGACGATTCCACCCAAATCATCAACGAAGAGCTAGTTGGTTGCGTTCACGATGTTTCCTTCCCTGAAAATTACGTTCCTCTTGCTCCCTCCGTTCACAATAAACCACCAGCTAAAGATTTCCCCTTTACACTTGACTCCTTCCAATCTGAAGCTATCAAGTGTCTCGATAATGGCGAGTCAGTCATGGTTTCAGCTCATACATCAGCTGGTAAAACTGTTGTGGCGTCGTATGCTATTGCCATGTCTTTGAAGGAAAACCAGAGAGTTATTTACACTTCTCCTATAAAGGCACTTAGTAATCAGAAGTACAGAGATTTTAAAGAAGAGTTTTCTGATGTTGGTTTGATGACTGGGGATGTGACTATCGATCCTAATGCCTCTTGTCTTGTCATGACTACGGAGATTTTGCGTAGTATGCAGTATAAAGGGTCAGAGATTATGCGGGAGGTTGCGTGGATTATTTTTGATGAGGTGCATTACATGCGTGATAGCGAAAGAGGTGTGGTTTGGGAAGAGAGTATTGTAATGGCTCCGAAGAATTCTCGTTTTGTGTTTCTATCGGCAACAGTTCCCAATGCCAAGGAGTTTGCTGATTGGGTTGCAAAGGTTCACCAACAACCATGTCACATTGTTTACACCGATTATCGGCCAACTCCACTTCAGCACTATGTCTTTCCTGCTGGAGGTAATGGACTTTACTTGGTTGTGGACGAAAAATCTAAATTTCATGAGGATAGCTTCCAGAAATCTCTCAACGCACTGGTTCCGACTAATGAGAGTGACAAGAAAAGAGATAATGGAAAGTTTCAAAAGGGATTAGTGATTGGAAAACTTGGTGAAGAAAGTGATATTTTCAAATTGGTGAAAATGATAATTCAGCGGCAATATGATCCCGTGATTTTGTTCAGTTTCAGCAAAAAGGAATGCGAGGCACTTGCTATGCAGATGTCTAAGATGGTTTTGAACAGCGATGATGAGAAAGACGCTGTGGAGACAATCTTTGCTAGTGCAATTGATATGCTTTCAGATGATGATAAAAAGCTACCTCAGGTGTCAAATATTTTACCCATCTTGAAACGTGGTATAGGCGTTCATCATTCAGGACTGCTTCCAATTTTGAAAGAAGTAATTGAGATATTATTTCAGGAAGGTCTTATTAAGTGTTTGTTTGCAACAGAGACATTTAGTATTGGATTGAACATGCCGGCAAAGACGGTTGTATTTACCAATGTACGTAAGTTTGATGGAGACAAGTTCCGGTGGCTATCAAGTGGAGAGTACATACAGATGAGTGGTCGTGCCGGACGTCGAGGTATTGACAAACGAGGTATCTGCATCCTCATGGTTGACGAGAAGATGGAACCCGCTGTTGCTAAATCAATGCTCAAAGGAAGTGCTGATTCTTTGAACAGTGCCTTCCATTTGAGCTATAACATGCTTCTAAATCAATTGCGGTGTGAAGAAGGTGATCCTGAGAATCTTCTGCGAAATTCGTTCTTTCAGTTTCAAGCTGATCGTGCTATACCTGATCTCGAGAAGCAAATAAAATCTCTGGAAGAAGAGAGAGACTCTTTGGTGATTGAAGAAGAAGAAAGCTTAAAAAATTACTATAACCTGATTTTGCAATATAAGAGTCTGAAGAAGGATATACGTGAAATTGTGTTCACTCCAAAGTACTGCTTACCCTTTTTGCTGCCAAACAGAGCTGTTTGTCTCGATTGCACAAATGATGATGAAGAGCCACAATCATTCAGCATTGAAGACCAGGATACATGGGGAGTGATCATGAAATTTAACAAAGTCAAAAGTTTATCTGAAGATGATGATAGTAGAAGACCAGAGGATGCAAACTACACCGTAGATGTGTTGACTAGATGTATGGTTAGCAAAGATGGCGTTGGCAAAAAGAAAGTTAAGGCTGTGCCAATTAAGGAACGTGGTGAGCCTGTTGTGGTCACTGTTCCTTTATCGCAGATAAAGAGTTTAAGCAGTGCAATCATGAATATACCAAAAGATCTTGTACCTTTGGAAGCTCGAGAGAATGCTCTGAAGAAGGTTTCTGAGTTACTCTCTAGACATCCCGATGGAATACCCCTAGATCCTGAAGTTGATATGAAGATTAAGAGCAGCTCTTACAAAAAGACAGTTCGGCGGCTGGAGGCTCTGGAAAACCTATTTGAAAAACACAAAATTGCAAAATCTCCACTCATAACAGAAAAGTTGAAAGTTCTACAGATGAAGGAAGAGCTAATAGCCAAGATCAAGTCACTTAAGAAAACTGTCCGATCGTCAACAGCATTGGCGTTTAAAGATGAACTCAAGGCCAGAAAGCGTGTTTTACGAAGGCTAGGATACATCACTAGTGATAATGTCGTGGAGTTGAAGGGTAAGGTTGCATGTGAAATCAGTAGTGCAGAAGAATTGACATTAACGGAGTTAATGTTCAGTGGTATCTTCAAGGATGCAAAGGTGGAGGAGTTGGTTTCGCTCCTCTCTTGCTTTGTATGGCGAGAGAGACTCCCCGACGCTGCTAAACCCAGAGAAGAACTCGACTTGCTCTTCATACAGTTACAAGACACAGCCAGGCGTGTAGCTGAAGTTCAGCTTGACTGCAAGGTCGAAATAGACGTGGAGAGTTTTGTGCAGTCTTTCAGACCTGATATAATGGAGGCGGTGTATGCTTGGGCAAAAGGGTCCAAATTCTATGAGGTCATGGAGATTGCTCGTGTTTTCGAAGGGAGCTTGATCAGAGCGATAAGGAGAATGGAGGAAGTTCTGCAACAGCTCATAGTAGCTGCAAAATCTATAGGAGAAACACAGCTTGAAGCTAAACTAGAAGAAGCTGTTTCCAAGATCAAAAGAGACATTGTATTCGCGGCGTCTCTCTACTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000460 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

DEAD DSHCT Helicase_C rRNA_proc-arch

Protein Analysis

988

Amino Acids

111.89

Weight (kDa)

5.83

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ResIII	PF04851	69 - 214	4e-08	Type III restriction enzyme, res subunit
DEAD	PF00270	71 - 219	1e-26	DEAD/DEAH box helicase
DEXQc_Suv3	PF22527	91 - 201	6.8e-08	DEXQ-box helicase domain of Suv3
Helicase_C	PF00271	383 - 462	3.2e-06	Helicase conserved C-terminal domain
MTR4-like_stalk	PF21408	516 - 578	1.5e-19	Exosome RNA helicase MTR4-like, stalk
MTR4_beta-barrel	PF13234	581 - 786	7.8e-45	Mtr4-like, beta-barrel domain
DSHCT	PF08148	813 - 983	5.8e-52	DSHCT (NUC185) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59760
fragaria_vesca	FvH4_5g28050 FvH4_5g28050 FvH4_5g28050
malus_domestica	MD08G1247600.v1.1
prunus_persica	Prupe.6G113400_v2.0.a1
pyrus_communis	pycom08g21450
rosa_chinensis	RchiOBHm_Chr7g0220221
rosa_laevigata	RLG00000002249
rosa_multiflora	Rmu_sc0001136.1_g000019
rosa_roxburghii	Rroxscaffold_3G00239700
rosa_rugosa	Rorug07G0191200
rosa_samantha	Rh7AG333300 Rh7CG350900 Rh7DG329600
rosa_wichuraiana	Rw7G028110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2687
AatII	GACGTC	1 cut(s)	1381
AccII	CGCG	1 cut(s)	2948
AciI	CCGC	9 cut(s)	50, 53, 514, 952, 1437, 1525, 2224, 2744, 2948
AclWI	GGATC	4 cut(s)	434, 956, 1535, 2165
AcoI	YGGCCR	1 cut(s)	719
AcsI	RAATTY	5 cut(s)	610, 794, 1561, 1862, 2771
AcuI	CTGAAG	7 cut(s)	240, 716, 1730, 1908, 2141, 2196, 2688
AcyI	GRCGYC	3 cut(s)	296, 1378, 2951
AfaI	GTAC	5 cut(s)	380, 1305, 1352, 1748, 2094
AfiI	CCNNNNNNNGG	2 cut(s)	717, 755
AflII	CTTAAG	1 cut(s)	2342
AhlI	ACTAGT	1 cut(s)	2432
AjiI	CACGTC	1 cut(s)	2701
AjnI	CCWGG	2 cut(s)	1836, 2654
AjuI	GAANNNNNNNTTGG	2 cut(s)	90, 122
AloI	GAACNNNNNNTCC	2 cut(s)	2498, 2530
Alw26I	GTCTC	9 cut(s)	239, 1058, 1244, 1314, 1632, 1790, 2581, 2928, 2958
AlwI	GGATC	4 cut(s)	434, 956, 1535, 2165
Ama87I	CYCGRG	2 cut(s)	1604, 2106
AoxI	GGCC	2 cut(s)	719, 2394
ApeKI	GCWGC	4 cut(s)	1765, 2199, 2600, 2867
ApoI	RAATTY	5 cut(s)	610, 794, 1561, 1862, 2771
ArsI	GACNNNNNNTTYG	2 cut(s)	2927, 2959
AspS9I	GGNCC	1 cut(s)	2766
AsuHPI	GGTGA	6 cut(s)	674, 920, 946, 1550, 1660, 2024
AsuII	TTCGAA	1 cut(s)	2805
AvaI	CYCGRG	2 cut(s)	1604, 2106
AvaII	GGWCC	1 cut(s)	2766
AxyI	CCTNAGG	1 cut(s)	1119
BauI	CACGAG	1 cut(s)	2796
BbsI	GAAGAC	3 cut(s)	78, 1839, 1912
BbvI	GCAGC	4 cut(s)	1752, 2211, 2587, 2854
BccI	CCATC	6 cut(s)	1021, 1148, 1310, 1423, 1958, 2150
BcgI	CGANNNNNNTGC	6 cut(s)	428, 462, 989, 1023, 1386, 1420
BciT130I	CCWGG	2 cut(s)	1838, 2656
BciVI	GTATCC	2 cut(s)	1834, 2417
BclI	TGATCA	2 cut(s)	1854, 2817
BcoDI	GTCTC	9 cut(s)	239, 1058, 1244, 1314, 1632, 1790, 2581, 2928, 2958
BcuI	ACTAGT	1 cut(s)	2432
BfaI	CTAG	8 cut(s)	104, 1077, 1944, 2145, 2168, 2420, 2433, 2906
BfmI	CTRYAG	2 cut(s)	2303, 2877
BfrI	CTTAAG	1 cut(s)	2342
BfuI	GTATCC	2 cut(s)	1834, 2417
BglII	AGATCT	1 cut(s)	2086
BisI	GCNGC	8 cut(s)	53, 953, 1766, 2200, 2225, 2601, 2868, 2949
BlsI	GCNGC	8 cut(s)	54, 954, 1767, 2201, 2226, 2602, 2869, 2950
BmcAI	AGTACT	1 cut(s)	1748
Bme1390I	CCNGG	2 cut(s)	1838, 2656
Bme18I	GGWCC	1 cut(s)	2766
BmeT110I	CYCGRG	2 cut(s)	1604, 2106
BmgBI	CACGTC	1 cut(s)	2701
BmgT120I	GGNCC	1 cut(s)	2766
BmiI	GGNNCC	5 cut(s)	7, 603, 837, 1434, 2767
BmrFI	CCNGG	2 cut(s)	1838, 2656
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	3 cut(s)	1416, 1906, 2524
BmuI	ACTGGG	1 cut(s)	432
BpiI	GAAGAC	3 cut(s)	78, 1839, 1912
BplI	GAGNNNNNCTC	8 cut(s)	1625, 1657, 2126, 2158, 2574, 2606, 2604, 2636
BpmI	CTGGAG	2 cut(s)	774, 2249
Bpu14I	TTCGAA	1 cut(s)	2805
BpuEI	CTTGAG	1 cut(s)	2375
Bsa29I	ATCGAT	1 cut(s)	438
BsaAI	YACGTR	2 cut(s)	1307, 1724
BsaHI	GRCGYC	3 cut(s)	296, 1378, 2951
BsaJI	CCNNGG	1 cut(s)	651
BsaWI	WCCGGW	1 cut(s)	1329
BsaXI	ACNNNNNCTCC	6 cut(s)	509, 539, 2498, 2528, 2732, 2762
Bsc4I	CCNNNNNNNGG	2 cut(s)	717, 755
Bse118I	RCCGGY	1 cut(s)	1276
Bse1I	ACTGG	2 cut(s)	427, 837
Bse21I	CCTNAGG	1 cut(s)	1119
BseBI	CCWGG	2 cut(s)	1838, 2656
BseCI	ATCGAT	1 cut(s)	438
BseDI	CCNNGG	1 cut(s)	651
BseGI	GGATG	5 cut(s)	433, 1407, 1921, 2149, 2539
BseLI	CCNNNNNNNGG	2 cut(s)	717, 755
BseMII	CTCAG	3 cut(s)	1133, 1536, 2124
BseNI	ACTGG	2 cut(s)	427, 837
BseRI	GAGGAG	2 cut(s)	2552, 2561
BseXI	GCAGC	4 cut(s)	1752, 2211, 2587, 2854
BsgI	GTGCAG	2 cut(s)	2505, 2735
Bsh1236I	CGCG	1 cut(s)	2948
Bsh1285I	CGRYCG	1 cut(s)	2360
BshFI	GGCC	2 cut(s)	721, 2396
BshVI	ATCGAT	1 cut(s)	438
BsiEI	CGRYCG	1 cut(s)	2360
BsiHKCI	CYCGRG	2 cut(s)	1604, 2106
BsiSI	CCGG	3 cut(s)	1277, 1330, 1374
BslI	CCNNNNNNNGG	2 cut(s)	717, 755
BsmAI	GTCTC	9 cut(s)	239, 1058, 1244, 1314, 1632, 1790, 2581, 2928, 2958
BsmBI	CGTCTC	1 cut(s)	2958
BsmI	GAATGC	2 cut(s)	1001, 2119
BsnI	GGCC	2 cut(s)	721, 2396
BsoBI	CYCGRG	2 cut(s)	1604, 2106
Bsp119I	TTCGAA	1 cut(s)	2805
BspACI	CCGC	9 cut(s)	50, 53, 514, 952, 1437, 1525, 2224, 2744, 2948
BspANI	GGCC	2 cut(s)	721, 2396
BspCNI	CTCAG	3 cut(s)	1132, 1537, 2125
BspDI	ATCGAT	1 cut(s)	438
BspFNI	CGCG	1 cut(s)	2948
BspHI	TCATGA	4 cut(s)	462, 799, 1857, 2070
BspLI	GGNNCC	5 cut(s)	7, 603, 837, 1434, 2767
BspPI	GGATC	4 cut(s)	434, 956, 1535, 2165
BspQI	GCTCTTC	4 cut(s)	93, 1803, 2310, 2636
BspT104I	TTCGAA	1 cut(s)	2805
BspTI	CTTAAG	1 cut(s)	2342
BsrFI	RCCGGY	1 cut(s)	1276
BsrI	ACTGG	2 cut(s)	427, 837
BssAI	RCCGGY	1 cut(s)	1276
BssECI	CCNNGG	1 cut(s)	651
BssNI	GRCGYC	3 cut(s)	296, 1378, 2951
BssSI	CACGAG	1 cut(s)	2796
BssT1I	CCWWGG	1 cut(s)	651
Bst2BI	CACGAG	1 cut(s)	2796
Bst2UI	CCWGG	2 cut(s)	1838, 2656
Bst4CI	ACNGT	9 cut(s)	289, 640, 1288, 1484, 1930, 2032, 2218, 2353, 2640
Bst6I	CTCTTC	8 cut(s)	8, 93, 390, 579, 1626, 1803, 2310, 2636
BstACI	GRCGYC	3 cut(s)	296, 1378, 2951
BstAFI	CTTAAG	1 cut(s)	2342
BstAPI	GCANNNNNTGC	1 cut(s)	553
BstBAI	YACGTR	2 cut(s)	1307, 1724
BstBI	TTCGAA	1 cut(s)	2805
BstC8I	GCNNGC	1 cut(s)	1278
BstDEI	CTNAG	5 cut(s)	365, 1023, 1119, 1545, 2133
BstENI	CCTNNNNNAGG	1 cut(s)	753
BstF5I	GGATG	5 cut(s)	433, 1407, 1921, 2149, 2539
BstFNI	CGCG	1 cut(s)	2948
BstMAI	GTCTC	9 cut(s)	239, 1058, 1244, 1314, 1632, 1790, 2581, 2928, 2958
BstMCI	CGRYCG	1 cut(s)	2360
BstMWI	GCNNNNNNNGC	6 cut(s)	302, 487, 553, 1589, 1965, 2750
BstNI	CCWGG	2 cut(s)	1838, 2656
BstNSI	RCATGY	4 cut(s)	556, 1276, 1510, 2472
BstSCI	CCNGG	2 cut(s)	1836, 2654
BstSFI	CTRYAG	2 cut(s)	2303, 2877
BstSNI	TACGTA	1 cut(s)	1307
BstUI	CGCG	1 cut(s)	2948
BstV1I	GCAGC	4 cut(s)	1752, 2211, 2587, 2854
BstV2I	GAAGAC	3 cut(s)	78, 1839, 1912
BstX2I	RGATCY	2 cut(s)	2086, 2170
BstYI	RGATCY	2 cut(s)	2086, 2170
Bsu15I	ATCGAT	1 cut(s)	438
Bsu36I	CCTNAGG	1 cut(s)	1119
BsuI	GTATCC	2 cut(s)	1834, 2417
BsuRI	GGCC	2 cut(s)	721, 2396
BsuTUI	ATCGAT	1 cut(s)	438
BtgZI	GCGATG	1 cut(s)	1056
BtrI	CACGTC	1 cut(s)	2701
BtsCI	GGATG	5 cut(s)	433, 1407, 1921, 2149, 2539
BtsI	GCAGTG	1 cut(s)	2068
BtsIMutI	CAGTG	6 cut(s)	30, 830, 1489, 2028, 2068, 2524
Cac8I	GCNNGC	1 cut(s)	1278
CciI	TCATGA	4 cut(s)	462, 799, 1857, 2070
Cfr10I	RCCGGY	1 cut(s)	1276
Cfr13I	GGNCC	1 cut(s)	2766
ClaI	ATCGAT	1 cut(s)	438
CseI	GACGC	4 cut(s)	285, 1064, 2606, 2940
Csp6I	GTAC	5 cut(s)	379, 1304, 1351, 1747, 2093
CviQI	GTAC	5 cut(s)	379, 1304, 1351, 1747, 2093
DdeI	CTNAG	5 cut(s)	365, 1023, 1119, 1545, 2133
DraI	TTTAAA	2 cut(s)	391, 2380
DrdI	GACNNNNNNGTC	1 cut(s)	2687
DseDI	GACNNNNNNGTC	1 cut(s)	2687
EaeI	YGGCCR	1 cut(s)	719
Eam1104I	CTCTTC	8 cut(s)	8, 93, 390, 579, 1626, 1803, 2310, 2636
EarI	CTCTTC	8 cut(s)	8, 93, 390, 579, 1626, 1803, 2310, 2636
EciI	GGCGGA	1 cut(s)	39
Eco105I	TACGTA	1 cut(s)	1307
Eco130I	CCWWGG	1 cut(s)	651
Eco47I	GGWCC	1 cut(s)	2766
Eco57I	CTGAAG	7 cut(s)	240, 716, 1730, 1908, 2141, 2196, 2688
Eco81I	CCTNAGG	1 cut(s)	1119
Eco88I	CYCGRG	2 cut(s)	1604, 2106
EcoNI	CCTNNNNNAGG	1 cut(s)	753
EcoRI	GAATTC	1 cut(s)	610
EcoRII	CCWGG	2 cut(s)	1836, 2654
EcoT14I	CCWWGG	1 cut(s)	651
ErhI	CCWWGG	1 cut(s)	651
Esp3I	CGTCTC	1 cut(s)	2958
FalI	AAGNNNNNCTT	4 cut(s)	1736, 1768, 2661, 2693
FauI	CCCGC	2 cut(s)	507, 1444
FbaI	TGATCA	2 cut(s)	1854, 2817
Fnu4HI	GCNGC	8 cut(s)	53, 953, 1766, 2200, 2225, 2601, 2868, 2949
FokI	GGATG	5 cut(s)	440, 1394, 1928, 2136, 2546
Fsp4HI	GCNGC	8 cut(s)	53, 953, 1766, 2200, 2225, 2601, 2868, 2949
FspBI	CTAG	8 cut(s)	104, 1077, 1944, 2145, 2168, 2420, 2433, 2906
GluI	GCNGC	8 cut(s)	53, 953, 1766, 2200, 2225, 2601, 2868, 2949
GsuI	CTGGAG	2 cut(s)	774, 2249
HaeIII	GGCC	2 cut(s)	721, 2396
HapII	CCGG	3 cut(s)	1277, 1330, 1374
HgaI	GACGC	4 cut(s)	285, 1064, 2606, 2940
Hin1I	GRCGYC	3 cut(s)	296, 1378, 2951
HincII	GTYRAC	3 cut(s)	1420, 1941, 2364
HindII	GTYRAC	3 cut(s)	1420, 1941, 2364
HindIII	AAGCTT	1 cut(s)	1666
HpaII	CCGG	3 cut(s)	1277, 1330, 1374
HphI	GGTGA	6 cut(s)	674, 920, 946, 1550, 1660, 2024
Hpy166II	GTNNAC	9 cut(s)	118, 166, 682, 706, 781, 1420, 1737, 1941, 2364
Hpy8I	GTNNAC	9 cut(s)	118, 166, 682, 706, 781, 1420, 1737, 1941, 2364
Hpy99I	CGWCG	3 cut(s)	301, 1383, 2600
HpyCH4III	ACNGT	9 cut(s)	289, 640, 1288, 1484, 1930, 2032, 2218, 2353, 2640
HpyCH4IV	ACGT	7 cut(s)	144, 1150, 1306, 1378, 1723, 2008, 2700
HpyF10VI	GCNNNNNNNGC	6 cut(s)	302, 487, 553, 1589, 1965, 2750
HpyF3I	CTNAG	5 cut(s)	365, 1023, 1119, 1545, 2133
HpySE526I	ACGT	7 cut(s)	144, 1150, 1306, 1378, 1723, 2008, 2700
Hsp92I	GRCGYC	3 cut(s)	296, 1378, 2951
KroI	GCCGGC	1 cut(s)	1276
KroNI	GCCGGC	1 cut(s)	1278
Ksp22I	TGATCA	2 cut(s)	1854, 2817
LguI	GCTCTTC	4 cut(s)	93, 1803, 2310, 2636
LmnI	GCTCC	5 cut(s)	52, 160, 607, 2565, 2811
Lsp1109I	GCAGC	4 cut(s)	1752, 2211, 2587, 2854
LweI	GCATC	3 cut(s)	1416, 1906, 2524
MaeI	CTAG	8 cut(s)	104, 1077, 1944, 2145, 2168, 2420, 2433, 2906
MaeII	ACGT	7 cut(s)	144, 1150, 1306, 1378, 1723, 2008, 2700
MaeIII	GTNAC	7 cut(s)	430, 695, 851, 2026, 2136, 2337, 2640
MfeI	CAATTG	2 cut(s)	1083, 1520
MflI	RGATCY	2 cut(s)	2086, 2170
MlyI	GAGTC	5 cut(s)	200, 257, 1634, 1714, 2583
MmeI	TCCRAC	1 cut(s)	863
MroNI	GCCGGC	1 cut(s)	1276
MslI	CAYNNNNRTG	3 cut(s)	1358, 1412, 2154
MspA1I	CMGCKG	3 cut(s)	278, 952, 1439
MspCI	CTTAAG	1 cut(s)	2342
MspI	CCGG	3 cut(s)	1277, 1330, 1374
MspR9I	CCNGG	2 cut(s)	1838, 2656
MunI	CAATTG	2 cut(s)	1083, 1520
Mva1269I	GAATGC	2 cut(s)	1001, 2119
MvaI	CCWGG	2 cut(s)	1838, 2656
MvnI	CGCG	1 cut(s)	2948
MwoI	GCNNNNNNNGC	6 cut(s)	302, 487, 553, 1589, 1965, 2750
NaeI	GCCGGC	1 cut(s)	1278
NgoMIV	GCCGGC	1 cut(s)	1276
NlaIV	GGNNCC	5 cut(s)	7, 603, 837, 1434, 2767
NmuCI	GTSAC	5 cut(s)	430, 695, 851, 2026, 2337
NspI	RCATGY	4 cut(s)	556, 1276, 1510, 2472
NspV	TTCGAA	1 cut(s)	2805
PaeR7I	CTCGAG	2 cut(s)	1604, 2106
PagI	TCATGA	4 cut(s)	462, 799, 1857, 2070
PciSI	GCTCTTC	4 cut(s)	93, 1803, 2310, 2636
PcsI	WCGNNNNNNNCGW	3 cut(s)	243, 1375, 2697
PctI	GAATGC	2 cut(s)	1001, 2119
PdiI	GCCGGC	1 cut(s)	1278
PfeI	GAWTC	5 cut(s)	32, 41, 77, 1472, 1549
PkrI	GCNGC	8 cut(s)	54, 954, 1767, 2201, 2226, 2602, 2869, 2950
Ple19I	CGATCG	1 cut(s)	2360
PleI	GAGTC	5 cut(s)	200, 256, 1634, 1713, 2583
PpsI	GAGTC	5 cut(s)	200, 256, 1634, 1713, 2583
Ppu21I	YACGTR	2 cut(s)	1307, 1724
Psp6I	CCWGG	2 cut(s)	1836, 2654
PspGI	CCWGG	2 cut(s)	1836, 2654
PspN4I	GGNNCC	5 cut(s)	7, 603, 837, 1434, 2767
PspPI	GGNCC	1 cut(s)	2766
PsrI	GAACNNNNNNTAC	2 cut(s)	2655, 2687
PsuI	RGATCY	2 cut(s)	2086, 2170
PvuI	CGATCG	1 cut(s)	2360
PvuII	CAGCTG	1 cut(s)	278
RsaI	GTAC	5 cut(s)	380, 1305, 1352, 1748, 2094
RsaNI	GTAC	5 cut(s)	379, 1304, 1351, 1747, 2093
RseI	CAYNNNNRTG	3 cut(s)	1358, 1412, 2154
SapI	GCTCTTC	4 cut(s)	93, 1803, 2310, 2636
SatI	GCNGC	8 cut(s)	53, 953, 1766, 2200, 2225, 2601, 2868, 2949
Sau96I	GGNCC	1 cut(s)	2766
ScaI	AGTACT	1 cut(s)	1748
SchI	GAGTC	5 cut(s)	200, 257, 1634, 1714, 2583
ScrFI	CCNGG	2 cut(s)	1838, 2656
SfaNI	GCATC	3 cut(s)	1416, 1906, 2524
SfcI	CTRYAG	2 cut(s)	2303, 2877
Sfr274I	CTCGAG	2 cut(s)	1604, 2106
SfuI	TTCGAA	1 cut(s)	2805
SinI	GGWCC	1 cut(s)	2766
SlaI	CTCGAG	2 cut(s)	1604, 2106
SmiMI	CAYNNNNRTG	3 cut(s)	1358, 1412, 2154
SmlI	CTYRAG	4 cut(s)	1604, 2106, 2342, 2390
SmoI	CTYRAG	4 cut(s)	1604, 2106, 2342, 2390
SnaBI	TACGTA	1 cut(s)	1307
SpeI	ACTAGT	1 cut(s)	2432
SsiI	CCGC	9 cut(s)	50, 53, 514, 952, 1437, 1525, 2224, 2744, 2948
SspI	AATATT	1 cut(s)	1132
SspMI	CTAG	8 cut(s)	104, 1077, 1944, 2145, 2168, 2420, 2433, 2906
StyD4I	CCNGG	2 cut(s)	1836, 2654
StyI	CCWWGG	1 cut(s)	651
TaaI	ACNGT	9 cut(s)	289, 640, 1288, 1484, 1930, 2032, 2218, 2353, 2640
TaiI	ACGT	7 cut(s)	147, 1153, 1309, 1381, 1726, 2011, 2703
TaqI	TCGA	9 cut(s)	237, 438, 1381, 1605, 1788, 2107, 2622, 2691, 2805
TatI	WGTACW	3 cut(s)	378, 1350, 1746
TauI	GCSGC	4 cut(s)	55, 955, 2227, 2951
TfiI	GAWTC	5 cut(s)	32, 41, 77, 1472, 1549
TscAI	CASTG	6 cut(s)	30, 837, 1489, 2035, 2068, 2524
TseFI	GTSAC	5 cut(s)	430, 695, 851, 2026, 2337
TseI	GCWGC	4 cut(s)	1765, 2199, 2600, 2867
Tsp45I	GTSAC	5 cut(s)	430, 695, 851, 2026, 2337
TspDTI	ATGAA	9 cut(s)	788, 1154, 1821, 1874, 2087, 2201, 2324, 2400, 2623
TspGWI	ACGGA	3 cut(s)	151, 485, 2519
TspRI	CASTG	6 cut(s)	30, 837, 1489, 2035, 2068, 2524
Vha464I	CTTAAG	1 cut(s)	2342
VpaK11BI	GGWCC	1 cut(s)	2766
XagI	CCTNNNNNAGG	1 cut(s)	753
XapI	RAATTY	5 cut(s)	610, 794, 1561, 1862, 2771
XbaI	TCTAGA	1 cut(s)	2144
XceI	RCATGY	4 cut(s)	556, 1276, 1510, 2472
XhoI	CTCGAG	2 cut(s)	1604, 2106
XspI	CTAG	8 cut(s)	104, 1077, 1944, 2145, 2168, 2420, 2433, 2906
ZraI	GACGTC	1 cut(s)	1379
ZrmI	AGTACT	1 cut(s)	1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.