Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001136.1

Orthogroup ID

OG0015112

Physical Location & Seq

Genomic Coordinates Forward (+)

69870 .. 76061

Gene Structure 6192 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001136.1_g000019.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2970 bp

atgggatccctgaagagaaaatcggaggaagatgactctgcagcagctccacccaaagtagccaagtcggagaacaagaacactcttgaaatcgtcaacaatgaacagatggtctgcgtgcacgacgtgtcgtaccctgagggttacgttcctccgccgccgccgccttcttcttccgaacccgccaagaaattccccttcactctcgacccttttcagtccgaagccatcaaatgcattgaaaatggggagtccgtcatggtgtctgctcacacatctgctggaaaaactgttgttgcgtcgtacgcgattgcgttgtgtttgcgtaataagcaacgtgtgatatacaccgcacccatcaaagctctcagcaaccaaaagtacagagagttcaaagaggagttttcggatgttgggttgatgactggagatgtaacaatcgaccccaatgcttcgtgcttggtgatgaccacggaaatctggcggagcatgcagtacaaaggatcagaggtgacgcgagaggtggcttggataatctttgatgaggtgcattacatgagggatcttgagagaggtgtggtgtgggaagagagcattgttatggctccaaagaatgctcgctttgtcttcctctcagcaactgtgcccaatgctaaggaatttgctgattggctcgcaaaggttcatcgacagccttgccacattgtctatacggattataggcccactcctcttcagcattatattttcccctccggaggggatggtctgtacttggtagttgatgaaaaaggaaagtttcgtgaggacagctttcaacaagctcttaatgcacttgctcctgcctccgacgctgctaagaagaaggaaaatggaaagtggcagaagggtctggtcatcggcaaggccgctgaagaaagcgatatcttcaagatggtgaaaatgataattcagcgtcaatatgaccctgtcatacttttcagctttagcaaaagggaatgtgaattacttgcaatgcagatggcaaagttggacctaaatggggacagtgagaaagcaaacatagaaaccatcttctggagtgctatggatatgctttcagacgacgataagaagttaccccaggttaccactatgttacccctgttaatgcgtggaataggtgtgcatcattctggtttgattcccattctaaaggaagtgattgagatattatttcaggaaggtcttatcaagtgtttatttgcaacagagaccttcagcataggactgaacatgcctgcgaaaactgttgtatttaccaatgtccggaaatttgatggtaataagttcagatggataaccagtggtgagtatatacaaatgagtggtcgtgctggtcgccggggtattgataaacgtgggatatgcatacttatggtagatgagaagctagagccatctactgccaaaatgatgcttaaaggaaatgctgatagtttgaacagtgcctttcatttaagctacaacatgcttctgaatcaattgcgctctgaagatggtaatccagaaaatttacttcgtaactcattctatcagttccaagctgatcgtgccattcccaatctggagaaacaaacaaaggagcttgagcaagagagggattcaattataattgaagaagaagatagtgtaaggaattattacaatctagtacagcaatacaagagtttaaagcaggatcttcgtgagattgtgatttatccaaagtactgcttaccatttctgaaacctggtaggcttgtgtcaatccaatgcacccgtgatgaagcttccgcttctttttctaccgaggaccatgtcacatggggtgttatacttaattttcaacgagtgaaaactgtttctgaagacgatgcagttaagagacctgaagattcaaactacacagtggatgttttgactaggtgtctggttggcacaaatggagttgcaaaaaaaacactcaaaattgttcctttgaaagaactgggagaacctgttgttgtttcgatttccatctctcagattaatagcatgagtcgactttgtatggtcataccaaatgatcttttgtcattacaagctcgagaaaacacactgaagaaagttcttgaaactctttcaagatttggagagaagattcctcttttagatcctgaagaagacatgaagattcaaagtaggtcgtacaaaaaagtggctcgtaggattgaggctttagagaacctgtttgacaggcatgaaattgcaaagtcaccactaattgagcaaaagctcaaggtttttcacatgaagcaggaattggcagcgaagatcaagtcaattaagaaaacaatgcgctcttcgactgcgttggcttttaaagatgaacttaaggcacgaaaacgtgttcttcggaggctaggatatgttactagcgatgatgttgtgcagttgaagggtaaggttgcttgtgaaatcagtagtgcagatgagttgaccctcacagagctcatgttcaatggcgttttcaaggacataaaggtagaagagatggtatctcttctctcatgttttgtttggcgggaaaaactaaaagatgctacaaaaccaagggaagaacttgacctgctcttcttgcaattacaagaaactgctcggagggtggctgaagttcagcttgagtgcaaggttgaaattgacatcgatagctttgtgagttcatttcggcctgatattatggaggctgcatatgcttgggcaaaaggctcaaaattttatgagataatgtcagttacaggggttttcgagggtagcttaatcagggcaatcaggagattagaggaagttcttcagcaacttatacacgcagccaattctattggagaaactgatcttgaatcaaaatttgaggaggctgtttcaaaaatcaagagagacattgtctttgcagcttccctatacttgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000460 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0034470 GO:0034641 GO:0034655 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360 GO:1901361 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

DEAD DSHCT Helicase_C rRNA_proc-arch

Protein Analysis

989

Amino Acids

112.23

Weight (kDa)

6.58

Isoelectric Point (pI)

49.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G59760
fragaria_vesca	FvH4_5g28050 FvH4_5g28050 FvH4_5g28050
malus_domestica	MD08G1247600.v1.1
prunus_persica	Prupe.6G113400_v2.0.a1
pyrus_communis	pycom08g21450
rosa_chinensis	RchiOBHm_Chr7g0220221
rosa_laevigata	RLG00000002249
rosa_multiflora	Rmu_sc0001136.1_g000019
rosa_roxburghii	Rroxscaffold_3G00239700
rosa_rugosa	Rorug07G0191200
rosa_samantha	Rh7AG333300 Rh7CG350900 Rh7DG329600
rosa_wichuraiana	Rw7G028110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1652
Acc36I	ACCTGC	1 cut(s)	2637
AccB7I	CCANNNNNTGG	1 cut(s)	1077
AccI	GTMKAC	1 cut(s)	2062
AccII	CGCG	2 cut(s)	308, 517
AccIII	TCCGGA	2 cut(s)	755, 1308
AclWI	GGATC	5 cut(s)	13, 511, 570, 1728, 2168
AcsI	RAATTY	6 cut(s)	191, 659, 1313, 1552, 2774, 2906
AdeI	CACNNNGTG	1 cut(s)	127
AfaI	GTAC	8 cut(s)	134, 305, 383, 497, 773, 1695, 1751, 2210
AfiI	CCNNNNNNNGG	5 cut(s)	758, 759, 1042, 1077, 1308
AflII	CTTAAG	1 cut(s)	2393
AflIII	ACRYGT	3 cut(s)	126, 337, 2407
AhdI	GACNNNNNGTC	1 cut(s)	1947
AjiI	CACGTC	1 cut(s)	127
AjnI	CCWGG	2 cut(s)	1122, 1771
AjuI	GAANNNNNNNTTGG	2 cut(s)	2306, 2338
Alw21I	GWGCWC	2 cut(s)	123, 2514
Alw26I	GTCTC	3 cut(s)	1247, 1900, 2931
Alw44I	GTGCAC	1 cut(s)	119
AlwI	GGATC	5 cut(s)	13, 511, 570, 1728, 2168
AlwNI	CAGNNNCTG	1 cut(s)	641
Ama87I	CYCGRG	1 cut(s)	2106
Aor13HI	TCCGGA	2 cut(s)	755, 1308
AoxI	GGCC	3 cut(s)	722, 906, 2729
ApaLI	GTGCAC	1 cut(s)	119
ApeKI	GCWGC	7 cut(s)	41, 44, 854, 2327, 2747, 2870, 2951
ApoI	RAATTY	6 cut(s)	191, 659, 1313, 1552, 2774, 2906
ArsI	GACNNNNNNTTYG	6 cut(s)	1354, 1386, 2324, 2356, 2930, 2962
AseI	ATTAAT	1 cut(s)	2049
Asp700I	GAANNNNTTC	1 cut(s)	2850
AspLEI	GCGC	2 cut(s)	1530, 2361
AspS9I	GGNCC	3 cut(s)	723, 1033, 1834
AsuC2I	CCSGG	1 cut(s)	1385
AsuHPI	GGTGA	5 cut(s)	475, 523, 949, 1361, 2268
AvaI	CYCGRG	1 cut(s)	2106
AvaII	GGWCC	2 cut(s)	1033, 1834
AxyI	CCTNAGG	1 cut(s)	138
BaeGI	GKGCMC	2 cut(s)	123, 648
BamHI	GGATCC	1 cut(s)	5
BanII	GRGCYC	1 cut(s)	2514
BbsI	GAAGAC	3 cut(s)	619, 1896, 2190
Bbv12I	GWGCWC	2 cut(s)	123, 2514
BbvI	GCAGC	7 cut(s)	53, 56, 841, 2339, 2734, 2882, 2963
BcgI	CGANNNNNNTGC	6 cut(s)	431, 465, 678, 712, 1706, 1740
BciT130I	CCWGG	2 cut(s)	1124, 1773
BcnI	CCSGG	1 cut(s)	1385
BcoDI	GTCTC	3 cut(s)	1247, 1900, 2931
BfaI	CTAG	5 cut(s)	1433, 1691, 1944, 2423, 2436
BfmI	CTRYAG	1 cut(s)	39
BfrI	CTTAAG	1 cut(s)	2393
BfuAI	ACCTGC	1 cut(s)	2637
BmcAI	AGTACT	1 cut(s)	1751
Bme1390I	CCNGG	3 cut(s)	1124, 1385, 1773
Bme18I	GGWCC	2 cut(s)	1033, 1834
BmeRI	GACNNNNNGTC	1 cut(s)	1947
BmeT110I	CYCGRG	1 cut(s)	2106
BmgBI	CACGTC	1 cut(s)	127
BmgT120I	GGNCC	3 cut(s)	723, 1033, 1834
BmiI	GGNNCC	2 cut(s)	7, 606
BmrFI	CCNGG	3 cut(s)	1124, 1385, 1773
BmrI	ACTGGG	1 cut(s)	2018
BmsI	GCATC	4 cut(s)	1177, 1446, 1885, 2590
BmuI	ACTGGG	1 cut(s)	2018
BpiI	GAAGAC	3 cut(s)	619, 1896, 2190
BpmI	CTGGAG	3 cut(s)	447, 1099, 1628
Bpu10I	CCTNAGC	1 cut(s)	654
BpuEI	CTTGAG	4 cut(s)	587, 1649, 2282, 2702
BpuMI	CCSGG	1 cut(s)	1385
Bsa29I	ATCGAT	1 cut(s)	2706
BsaBI	GATNNNNATC	2 cut(s)	1542, 2036
BsaI	GGTCTC	2 cut(s)	1247, 1900
BsaJI	CCNNGG	5 cut(s)	471, 1122, 1384, 1830, 2612
BsaWI	WCCGGW	2 cut(s)	755, 1308
BsaXI	ACNNNNNCTCC	2 cut(s)	2004, 2034
Bsc4I	CCNNNNNNNGG	5 cut(s)	758, 759, 1042, 1077, 1308
Bse1I	ACTGG	3 cut(s)	430, 1344, 2013
Bse21I	CCTNAGG	1 cut(s)	138
Bse3DI	GCAATG	1 cut(s)	1020
Bse8I	GATNNNNATC	2 cut(s)	1542, 2036
BseAI	TCCGGA	2 cut(s)	755, 1308
BseBI	CCWGG	2 cut(s)	1124, 1773
BseCI	ATCGAT	1 cut(s)	2706
BseDI	CCNNGG	5 cut(s)	471, 1122, 1384, 1830, 2612
BseGI	GGATG	3 cut(s)	415, 769, 1939
BseJI	GATNNNNATC	2 cut(s)	1542, 2036
BseLI	CCNNNNNNNGG	5 cut(s)	758, 759, 1042, 1077, 1308
BseMI	GCAATG	1 cut(s)	1020
BseMII	CTCAG	4 cut(s)	129, 382, 648, 2057
BseNI	ACTGG	3 cut(s)	430, 1344, 2013
BseRI	GAGGAG	3 cut(s)	413, 720, 2927
BseSI	GKGCMC	2 cut(s)	123, 648
BseXI	GCAGC	7 cut(s)	53, 56, 841, 2339, 2734, 2882, 2963
BsgI	GTGCAG	2 cut(s)	2471, 2508
Bsh1236I	CGCG	2 cut(s)	308, 517
BshFI	GGCC	3 cut(s)	724, 908, 2731
BshVI	ATCGAT	1 cut(s)	2706
BsiHKAI	GWGCWC	2 cut(s)	123, 2514
BsiHKCI	CYCGRG	1 cut(s)	2106
BsiSI	CCGG	3 cut(s)	756, 1309, 1384
BsiWI	CGTACG	1 cut(s)	303
BslFI	GGGAC	1 cut(s)	1058
BslI	CCNNNNNNNGG	5 cut(s)	758, 759, 1042, 1077, 1308
BsmAI	GTCTC	3 cut(s)	1247, 1900, 2931
BsmFI	GGGAC	1 cut(s)	1058
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	3 cut(s)	724, 908, 2731
Bso31I	GGTCTC	2 cut(s)	1247, 1900
BsoBI	CYCGRG	1 cut(s)	2106
Bsp1286I	GDGCHC	3 cut(s)	123, 648, 2514
Bsp13I	TCCGGA	2 cut(s)	755, 1308
Bsp143I	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
BspANI	GGCC	3 cut(s)	724, 908, 2731
BspCNI	CTCAG	4 cut(s)	130, 381, 647, 2056
BspDI	ATCGAT	1 cut(s)	2706
BspEI	TCCGGA	2 cut(s)	755, 1308
BspFNI	CGCG	2 cut(s)	308, 517
BspLI	GGNNCC	2 cut(s)	7, 606
BspMAI	CTGCAG	1 cut(s)	43
BspMI	ACCTGC	1 cut(s)	2637
BspPI	GGATC	5 cut(s)	13, 511, 570, 1728, 2168
BspQI	GCTCTTC	2 cut(s)	2368, 2639
BspTI	CTTAAG	1 cut(s)	2393
BspTNI	GGTCTC	2 cut(s)	1247, 1900
BsrDI	GCAATG	1 cut(s)	1020
BsrI	ACTGG	3 cut(s)	430, 1344, 2013
BssECI	CCNNGG	5 cut(s)	471, 1122, 1384, 1830, 2612
BssMI	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
BssT1I	CCWWGG	1 cut(s)	2612
Bst2UI	CCWGG	2 cut(s)	1124, 1773
Bst4CI	ACNGT	7 cut(s)	292, 643, 1049, 1291, 1487, 1882, 1930
Bst6I	CTCTTC	7 cut(s)	8, 582, 738, 2368, 2544, 2568, 2639
BstAFI	CTTAAG	1 cut(s)	2393
BstC8I	GCNNGC	5 cut(s)	119, 491, 619, 675, 1281
BstDEI	CTNAG	6 cut(s)	138, 368, 634, 654, 858, 2043
BstDSI	CCRYGG	1 cut(s)	471
BstEII	GGTNACC	1 cut(s)	1126
BstF5I	GGATG	3 cut(s)	415, 769, 1939
BstFNI	CGCG	2 cut(s)	308, 517
BstHHI	GCGC	2 cut(s)	1530, 2361
BstKTI	GATC	9 cut(s)	8, 506, 565, 1591, 1723, 2089, 2176, 2337, 2896
BstMAI	GTCTC	3 cut(s)	1247, 1900, 2931
BstMBI	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
BstMWI	GCNNNNNNNGC	9 cut(s)	163, 305, 331, 490, 830, 851, 1592, 2638, 2753
BstNI	CCWGG	2 cut(s)	1124, 1773
BstNSI	RCATGY	3 cut(s)	493, 1279, 1513
BstPI	GGTNACC	1 cut(s)	1126
BstSCI	CCNGG	3 cut(s)	1122, 1383, 1771
BstSFI	CTRYAG	1 cut(s)	39
BstSLI	GKGCMC	2 cut(s)	123, 648
BstUI	CGCG	2 cut(s)	308, 517
BstV1I	GCAGC	7 cut(s)	53, 56, 841, 2339, 2734, 2882, 2963
BstV2I	GAAGAC	3 cut(s)	619, 1896, 2190
BstX2I	RGATCY	4 cut(s)	5, 562, 1720, 2173
BstYI	RGATCY	4 cut(s)	5, 562, 1720, 2173
Bsu15I	ATCGAT	1 cut(s)	2706
Bsu36I	CCTNAGG	1 cut(s)	138
BsuRI	GGCC	3 cut(s)	724, 908, 2731
BsuTUI	ATCGAT	1 cut(s)	2706
BtgI	CCRYGG	1 cut(s)	471
BtgZI	GCGATG	1 cut(s)	2454
BtrI	CACGTC	1 cut(s)	127
BtsCI	GGATG	3 cut(s)	415, 769, 1939
BtsIMutI	CAGTG	5 cut(s)	1054, 1351, 1492, 1935, 2117
BveI	ACCTGC	1 cut(s)	2637
Cac8I	GCNNGC	5 cut(s)	119, 491, 619, 675, 1281
CaiI	CAGNNNCTG	1 cut(s)	641
CfoI	GCGC	2 cut(s)	1530, 2361
Cfr13I	GGNCC	3 cut(s)	723, 1033, 1834
ClaI	ATCGAT	1 cut(s)	2706
CseI	GACGC	4 cut(s)	288, 523, 860, 944
CsiI	ACCWGGT	1 cut(s)	1771
Csp6I	GTAC	8 cut(s)	133, 304, 382, 496, 772, 1694, 1750, 2209
CviQI	GTAC	8 cut(s)	133, 304, 382, 496, 772, 1694, 1750, 2209
DdeI	CTNAG	6 cut(s)	138, 368, 634, 654, 858, 2043
DpnI	GATC	9 cut(s)	7, 505, 564, 1590, 1722, 2088, 2175, 2336, 2895
DpnII	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
DraI	TTTAAA	2 cut(s)	1713, 2383
DraIII	CACNNNGTG	1 cut(s)	127
DriI	GACNNNNNGTC	1 cut(s)	1947
Eam1104I	CTCTTC	7 cut(s)	8, 582, 738, 2368, 2544, 2568, 2639
Eam1105I	GACNNNNNGTC	1 cut(s)	1947
EarI	CTCTTC	7 cut(s)	8, 582, 738, 2368, 2544, 2568, 2639
EciI	GGCGGA	2 cut(s)	144, 499
Ecl136II	GAGCTC	1 cut(s)	2512
Eco130I	CCWWGG	1 cut(s)	2612
Eco24I	GRGCYC	1 cut(s)	2514
Eco31I	GGTCTC	2 cut(s)	1247, 1900
Eco32I	GATATC	1 cut(s)	925
Eco47I	GGWCC	2 cut(s)	1033, 1834
Eco53kI	GAGCTC	1 cut(s)	2512
Eco81I	CCTNAGG	1 cut(s)	138
Eco88I	CYCGRG	1 cut(s)	2106
Eco91I	GGTNACC	1 cut(s)	1126
EcoICRI	GAGCTC	1 cut(s)	2512
EcoO65I	GGTNACC	1 cut(s)	1126
EcoRII	CCWGG	2 cut(s)	1122, 1771
EcoRV	GATATC	1 cut(s)	925
EcoT14I	CCWWGG	1 cut(s)	2612
EcoT22I	ATGCAT	2 cut(s)	239, 1412
EcoT38I	GRGCYC	1 cut(s)	2514
ErhI	CCWWGG	1 cut(s)	2612
FalI	AAGNNNNNCTT	6 cut(s)	1739, 1771, 2376, 2408, 2664, 2696
FaqI	GGGAC	1 cut(s)	1058
FauI	CCCGC	2 cut(s)	190, 2577
FauNDI	CATATG	1 cut(s)	2752
FblI	GTMKAC	1 cut(s)	2062
FokI	GGATG	3 cut(s)	422, 776, 1946
FriOI	GRGCYC	1 cut(s)	2514
FspBI	CTAG	5 cut(s)	1433, 1691, 1944, 2423, 2436
GlaI	GCGC	2 cut(s)	1529, 2360
GsuI	CTGGAG	3 cut(s)	447, 1099, 1628
HaeIII	GGCC	3 cut(s)	724, 908, 2731
HapII	CCGG	3 cut(s)	756, 1309, 1384
HgaI	GACGC	4 cut(s)	288, 523, 860, 944
HhaI	GCGC	2 cut(s)	1530, 2361
Hin6I	GCGC	2 cut(s)	1528, 2359
HinP1I	GCGC	2 cut(s)	1528, 2359
HincII	GTYRAC	3 cut(s)	97, 2063, 2499
HindII	GTYRAC	3 cut(s)	97, 2063, 2499
HindIII	AAGCTT	1 cut(s)	1809
HpaII	CCGG	3 cut(s)	756, 1309, 1384
HphI	GGTGA	5 cut(s)	475, 523, 949, 1361, 2268
Hpy166II	GTNNAC	4 cut(s)	97, 121, 2063, 2499
Hpy8I	GTNNAC	4 cut(s)	97, 121, 2063, 2499
Hpy99I	CGWCG	4 cut(s)	128, 304, 854, 1109
HpyAV	CCTTC	7 cut(s)	177, 208, 859, 880, 1217, 1267, 2452
HpyCH4III	ACNGT	7 cut(s)	292, 643, 1049, 1291, 1487, 1882, 1930
HpyCH4IV	ACGT	5 cut(s)	126, 147, 337, 1399, 2407
HpyF10VI	GCNNNNNNNGC	9 cut(s)	163, 305, 331, 490, 830, 851, 1592, 2638, 2753
HpyF3I	CTNAG	6 cut(s)	138, 368, 634, 654, 858, 2043
HpySE526I	ACGT	5 cut(s)	126, 147, 337, 1399, 2407
HspAI	GCGC	2 cut(s)	1528, 2359
Kpn2I	TCCGGA	2 cut(s)	755, 1308
Kzo9I	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
LguI	GCTCTTC	2 cut(s)	2368, 2639
LmnI	GCTCC	5 cut(s)	52, 486, 610, 844, 1624
Lsp1109I	GCAGC	7 cut(s)	53, 56, 841, 2339, 2734, 2882, 2963
LweI	GCATC	4 cut(s)	1177, 1446, 1885, 2590
MabI	ACCWGGT	1 cut(s)	1771
MaeI	CTAG	5 cut(s)	1433, 1691, 1944, 2423, 2436
MaeII	ACGT	5 cut(s)	126, 147, 337, 1399, 2407
MalI	GATC	9 cut(s)	7, 505, 564, 1590, 1722, 2088, 2175, 2336, 2895
MboI	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
MfeI	CAATTG	1 cut(s)	1523
MflI	RGATCY	4 cut(s)	5, 562, 1720, 2173
MhlI	GDGCHC	3 cut(s)	123, 648, 2514
MlyI	GAGTC	3 cut(s)	29, 260, 2068
MmeI	TCCRAC	3 cut(s)	48, 873, 1011
Mph1103I	ATGCAT	2 cut(s)	239, 1412
MroI	TCCGGA	2 cut(s)	755, 1308
MroXI	GAANNNNTTC	1 cut(s)	2850
MslI	CAYNNNNRTG	2 cut(s)	599, 1415
MspA1I	CMGCKG	1 cut(s)	911
MspCI	CTTAAG	1 cut(s)	2393
MspI	CCGG	3 cut(s)	756, 1309, 1384
MspR9I	CCNGG	3 cut(s)	1124, 1385, 1773
MunI	CAATTG	1 cut(s)	1523
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	2 cut(s)	1124, 1773
MvnI	CGCG	2 cut(s)	308, 517
MwoI	GCNNNNNNNGC	9 cut(s)	163, 305, 331, 490, 830, 851, 1592, 2638, 2753
NciI	CCSGG	1 cut(s)	1385
NdeI	CATATG	1 cut(s)	2752
NdeII	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
NlaIV	GGNNCC	2 cut(s)	7, 606
NmuCI	GTSAC	3 cut(s)	511, 1840, 2274
NsiI	ATGCAT	2 cut(s)	239, 1412
NspI	RCATGY	3 cut(s)	493, 1279, 1513
PaeI	GCATGC	1 cut(s)	493
PaeR7I	CTCGAG	1 cut(s)	2106
PciSI	GCTCTTC	2 cut(s)	2368, 2639
PctI	GAATGC	1 cut(s)	619
PdmI	GAANNNNTTC	1 cut(s)	2850
PfeI	GAWTC	7 cut(s)	1183, 1519, 1643, 1916, 2161, 2194, 2900
Pfl23II	CGTACG	1 cut(s)	303
PflFI	GACNNNGTC	3 cut(s)	968, 1838, 2942
PflMI	CCANNNNNTGG	1 cut(s)	1077
PleI	GAGTC	3 cut(s)	29, 259, 2067
PpsI	GAGTC	3 cut(s)	29, 259, 2067
PshBI	ATTAAT	1 cut(s)	2049
PsiI	TTATAA	1 cut(s)	1652
Psp124BI	GAGCTC	1 cut(s)	2514
Psp6I	CCWGG	2 cut(s)	1122, 1771
PspEI	GGTNACC	1 cut(s)	1126
PspGI	CCWGG	2 cut(s)	1122, 1771
PspLI	CGTACG	1 cut(s)	303
PspN4I	GGNNCC	2 cut(s)	7, 606
PspPI	GGNCC	3 cut(s)	723, 1033, 1834
PsrI	GAACNNNNNNTAC	2 cut(s)	374, 406
PstI	CTGCAG	1 cut(s)	43
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	4 cut(s)	5, 562, 1720, 2173
PsyI	GACNNNGTC	3 cut(s)	968, 1838, 2942
RsaI	GTAC	8 cut(s)	134, 305, 383, 497, 773, 1695, 1751, 2210
RsaNI	GTAC	8 cut(s)	133, 304, 382, 496, 772, 1694, 1750, 2209
RseI	CAYNNNNRTG	2 cut(s)	599, 1415
SacI	GAGCTC	1 cut(s)	2514
SalI	GTCGAC	1 cut(s)	2061
SapI	GCTCTTC	2 cut(s)	2368, 2639
Sau3AI	GATC	9 cut(s)	5, 503, 562, 1588, 1720, 2086, 2173, 2334, 2893
Sau96I	GGNCC	3 cut(s)	723, 1033, 1834
ScaI	AGTACT	1 cut(s)	1751
SchI	GAGTC	3 cut(s)	29, 260, 2068
ScrFI	CCNGG	3 cut(s)	1124, 1385, 1773
SduI	GDGCHC	3 cut(s)	123, 648, 2514
SexAI	ACCWGGT	1 cut(s)	1771
SfaNI	GCATC	4 cut(s)	1177, 1446, 1885, 2590
SfcI	CTRYAG	1 cut(s)	39
Sfr274I	CTCGAG	1 cut(s)	2106
SinI	GGWCC	2 cut(s)	1033, 1834
SlaI	CTCGAG	1 cut(s)	2106
SmiMI	CAYNNNNRTG	2 cut(s)	599, 1415
SmlI	CTYRAG	6 cut(s)	566, 1628, 2106, 2297, 2393, 2681
SmoI	CTYRAG	6 cut(s)	566, 1628, 2106, 2297, 2393, 2681
SphI	GCATGC	1 cut(s)	493
SspMI	CTAG	5 cut(s)	1433, 1691, 1944, 2423, 2436
SstI	GAGCTC	1 cut(s)	2514
StyD4I	CCNGG	3 cut(s)	1122, 1383, 1771
StyI	CCWWGG	1 cut(s)	2612
TaaI	ACNGT	7 cut(s)	292, 643, 1049, 1291, 1487, 1882, 1930
TaiI	ACGT	5 cut(s)	129, 150, 340, 1402, 2410
TaqI	TCGA	9 cut(s)	207, 441, 688, 2030, 2062, 2107, 2366, 2706, 2808
TatI	WGTACW	5 cut(s)	381, 495, 771, 1693, 1749
TauI	GCSGC	4 cut(s)	160, 163, 166, 911
TfiI	GAWTC	7 cut(s)	1183, 1519, 1643, 1916, 2161, 2194, 2900
TscAI	CASTG	5 cut(s)	1054, 1351, 1492, 1935, 2124
TseFI	GTSAC	3 cut(s)	511, 1840, 2274
TseI	GCWGC	7 cut(s)	41, 44, 854, 2327, 2747, 2870, 2951
Tsp45I	GTSAC	3 cut(s)	511, 1840, 2274
TspGWI	ACGGA	3 cut(s)	244, 488, 728
TspRI	CASTG	5 cut(s)	1054, 1351, 1492, 1935, 2124
Tth111I	GACNNNGTC	3 cut(s)	968, 1838, 2942
Van91I	CCANNNNNTGG	1 cut(s)	1077
Vha464I	CTTAAG	1 cut(s)	2393
VneI	GTGCAC	1 cut(s)	119
VpaK11BI	GGWCC	2 cut(s)	1033, 1834
VspI	ATTAAT	1 cut(s)	2049
XapI	RAATTY	6 cut(s)	191, 659, 1313, 1552, 2774, 2906
XceI	RCATGY	3 cut(s)	493, 1279, 1513
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1603
XhoI	CTCGAG	1 cut(s)	2106
XmiI	GTMKAC	1 cut(s)	2062
XmnI	GAANNNNTTC	1 cut(s)	2850
XspI	CTAG	5 cut(s)	1433, 1691, 1944, 2423, 2436
ZrmI	AGTACT	1 cut(s)	1751
Zsp2I	ATGCAT	2 cut(s)	239, 1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.