AT1G67480

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011253
Physical Location & Seq
Forward (+)
25276183 .. 25278780
2598 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G67480.2

Sequence Viewer

Length: 1131 bp
ATGCAAGCTTTTGCTTTAAGTGGGAAGAAAAGGATTGTGAATCACGGCATGTGTTTTTCCAAAGGAAATCTTGATCTCGGTTCACGCTTGTCTGAGAATTTTATGGATGATCCTTTGATCCCGGGATTGCCTGATGATGTCGCTAAGCAGTGTCTAGCGCTTGTTCCGCGTGCTAGGTTCCCATCCATGGGAAGTGTATGCAAGAAATGGAGGTTTGTTGTCCAGAGCAAAGAGTTTATTACTGTGAGAAGACTCGCTGGTATGCTTGAGGAGTGGCTTTATGTCTTAACGATGAATGCTGGTGGGAAAGATAACCGATGGGAGGTGATGGACTGTTTGGGACAGAAGCTATCATCTCTTCCACCGATGCCTGGTCCTGCAAAAACAGGGTTTAAGGTTGTTGTGGTTGATGGGAAACTTCTTGTCATTGCTGGTTGTTGTATGATCAACGGTTCGCTTGTTGCATCTGCTGATGTTTATCAGTATGATACATGCCTCAATAGCTGGAGTAGACTAGCAGACCTGGAGGTAGCTCGGTATGATTTCGCTTGTGCTGAGGTGAACGGGCATGTTTATGTTGTGGGAGGTCATGGGGTAGATGGTGAGAGTCTGTCAAGTGCAGAGGTGTATGATCCTGAGACGTGTACATGGACTTTCATAGAGTCTTTAAGGCGTCCGAGGTGGGGTTGTTTCGCTAGCGCCTTCAACGGGAAGCTATATGTGATGGGTGGGAGATCCAACTTCACTATTGGAAACTCAAAACTTCTTGATGTGTACAACACTCAATGTGGCTCCTGGCATGGTAGCAAAAACGGTTTAACGATGGTCACAGCTCATGTTGAAGTAGGGAAAAAGCTGTTCTGTATCGACTGGAAGAACCACCGGAAGATGTCGGTGTTCAATGCGGAAGACGAAACCTGGGAAGTGGTGGCTCTTCCGCTATCAGGAAGCTCGAGGGCCGGGTTTCAGTTTGGTAAGCTGAGTGGGAAGCTTTTGCTATTCTCGTCTCAGGAAGAAACCGGTCAATGTACTTTACTGTATGACCCGGATGCTTCACCAGGCACACAGTGGAAAACGTCTGAGATCAAACTCTCTGGTTCTTGCGTATGCAGTGTCACAATCACAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0031461 GO:0031463 GO:0032991 GO:0044424 GO:0044464 GO:1902494 GO:1990234
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box Kelch_1

Protein Analysis

376

Amino Acids

41.23

Weight (kDa)

7.85

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_FKB95 PF25210 115 - 221 8.1e-12 FKB95, Kelch-repeats domain
Beta-prop_Calicin PF13964 117 - 268 1.9e-13 Calicin, beta-propeller domain
Kelch_1 PF01344 129 - 175 2.3e-08 Kelch motif
Kelch_KLHDC2_KLHL20_DRC7 PF24681 130 - 313 1.6e-14 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Kelch_1 PF01344 178 - 223 1e-13 Kelch motif
Kelch_2 PF07646 179 - 221 3.9e-06 Kelch motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011253)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67480 AT1G67480 AT1G67480
fragaria_vesca FvH4_4g23951 FvH4_4g23951
malus_domestica MD13G1117000.v1.1 MD16G1117600.v1.1
prunus_persica Prupe.1G228600_v2.0.a1
pyrus_communis pycom13g10150
rosa_chinensis RchiOBHm_Chr4g0430611
rosa_laevigata RLG00000006963
rosa_multiflora Rmu_co8108234.1_g000001
rosa_roxburghii Rroxscaffold_5G00372360
rosa_rugosa Rorug04G0244800 Rorug04G0244800
rosa_samantha Rh4AG300700 Rh4BG307800 Rh4CG324900 Rh4DG305400
rosa_wichuraiana Rw4G026090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 511
AccII CGCG 1 cut(s) 169
AciI CCGC 3 cut(s) 167, 905, 938
AclWI GGATC 4 cut(s) 104, 112, 626, 729
AcsI RAATTY 1 cut(s) 97
AcyI GRCGYC 1 cut(s) 673
AdeI CACNNNGTG 1 cut(s) 1068
AfaI GTAC 3 cut(s) 646, 776, 1030
AfeI AGCGCT 1 cut(s) 159
AfiI CCNNNNNNNGG 7 cut(s) 187, 188, 322, 371, 683, 708, 944
AflIII ACRYGT 1 cut(s) 641
AgeI ACCGGT 1 cut(s) 1019
AgsI TTSAA 3 cut(s) 706, 842, 901
AjiI CACGTC 1 cut(s) 642
AjnI CCWGG 5 cut(s) 370, 522, 794, 917, 1057
Alw26I GTCTC 2 cut(s) 632, 1011
AlwI GGATC 4 cut(s) 104, 112, 626, 729
Ama87I CYCGRG 2 cut(s) 121, 952
Aor51HI AGCGCT 1 cut(s) 159
AoxI GGCC 1 cut(s) 957
ApoI RAATTY 1 cut(s) 97
AsiGI ACCGGT 1 cut(s) 1019
AspLEI GCGC 2 cut(s) 160, 701
AspS9I GGNCC 2 cut(s) 374, 957
AsuC2I CCSGG 4 cut(s) 122, 123, 961, 1046
AsuHPI GGTGA 4 cut(s) 337, 571, 614, 1047
AsuNHI GCTAGC 1 cut(s) 695
AvaI CYCGRG 2 cut(s) 121, 952
AvaII GGWCC 1 cut(s) 374
BbsI GAAGAC 2 cut(s) 256, 915
BbvCI CCTCAGC 1 cut(s) 555
BccI CCATC 7 cut(s) 190, 312, 322, 404, 593, 718, 817
BceAI ACGGC 1 cut(s) 61
BciT130I CCWGG 5 cut(s) 372, 524, 796, 919, 1059
BclI TGATCA 1 cut(s) 444
BcnI CCSGG 4 cut(s) 122, 123, 961, 1046
BcoDI GTCTC 2 cut(s) 632, 1011
BfaI CTAG 4 cut(s) 155, 174, 515, 696
BfoI RGCGCY 2 cut(s) 161, 702
BlpI GCTNAGC 1 cut(s) 144
Bme1390I CCNGG 9 cut(s) 122, 123, 372, 524, 796, 919, 961, 1046, 1059
Bme18I GGWCC 1 cut(s) 374
BmeT110I CYCGRG 2 cut(s) 121, 952
BmgBI CACGTC 1 cut(s) 642
BmgT120I GGNCC 2 cut(s) 374, 957
BmiI GGNNCC 2 cut(s) 179, 793
BmrFI CCNGG 9 cut(s) 122, 123, 372, 524, 796, 919, 961, 1046, 1059
BmsI GCATC 3 cut(s) 357, 473, 1039
BmtI GCTAGC 1 cut(s) 699
BpiI GAAGAC 2 cut(s) 256, 915
BpmI CTGGAG 2 cut(s) 526, 545
Bpu10I CCTNAGC 1 cut(s) 555
Bpu1102I GCTNAGC 1 cut(s) 144
BpuEI CTTGAG 1 cut(s) 287
BpuMI CCSGG 4 cut(s) 122, 123, 961, 1046
BsaBI GATNNNNATC 1 cut(s) 477
BsaHI GRCGYC 1 cut(s) 673
BsaJI CCNNGG 4 cut(s) 121, 186, 677, 918
BsaWI WCCGGW 2 cut(s) 882, 1019
Bsc4I CCNNNNNNNGG 7 cut(s) 187, 188, 322, 371, 683, 708, 944
Bse118I RCCGGY 1 cut(s) 1019
Bse1I ACTGG 1 cut(s) 875
Bse3DI GCAATG 1 cut(s) 426
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 5 cut(s) 372, 524, 796, 919, 1059
BseDI CCNNGG 4 cut(s) 121, 186, 677, 918
BseGI GGATG 3 cut(s) 112, 182, 1054
BseJI GATNNNNATC 1 cut(s) 477
BseLI CCNNNNNNNGG 7 cut(s) 187, 188, 322, 371, 683, 708, 944
BseMI GCAATG 1 cut(s) 426
BseMII CTCAG 6 cut(s) 84, 546, 627, 971, 1022, 1071
BseNI ACTGG 1 cut(s) 875
BseRI GAGGAG 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 639
Bsh1236I CGCG 1 cut(s) 169
BshFI GGCC 1 cut(s) 959
BshTI ACCGGT 1 cut(s) 1019
BsiHKCI CYCGRG 2 cut(s) 121, 952
BsiSI CCGG 5 cut(s) 122, 883, 960, 1020, 1046
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 7 cut(s) 187, 188, 322, 371, 683, 708, 944
BsmAI GTCTC 2 cut(s) 632, 1011
BsmBI CGTCTC 2 cut(s) 632, 1011
BsmFI GGGAC 1 cut(s) 354
BsmI GAATGC 1 cut(s) 301
BsnI GGCC 1 cut(s) 959
BsoBI CYCGRG 2 cut(s) 121, 952
Bsp1407I TGTACA 2 cut(s) 644, 774
Bsp143I GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
Bsp1720I GCTNAGC 1 cut(s) 144
Bsp19I CCATGG 1 cut(s) 186
BspACI CCGC 3 cut(s) 167, 905, 938
BspANI GGCC 1 cut(s) 959
BspCNI CTCAG 6 cut(s) 85, 547, 628, 972, 1021, 1072
BspFNI CGCG 1 cut(s) 169
BspLI GGNNCC 2 cut(s) 179, 793
BspOI GCTAGC 1 cut(s) 699
BspPI GGATC 4 cut(s) 104, 112, 626, 729
BspQI GCTCTTC 1 cut(s) 939
BsrDI GCAATG 1 cut(s) 426
BsrFI RCCGGY 1 cut(s) 1019
BsrGI TGTACA 2 cut(s) 644, 774
BsrI ACTGG 1 cut(s) 875
BssAI RCCGGY 1 cut(s) 1019
BssECI CCNNGG 4 cut(s) 121, 186, 677, 918
BssMI GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
BssNI GRCGYC 1 cut(s) 673
BssT1I CCWWGG 1 cut(s) 186
Bst2UI CCWGG 5 cut(s) 372, 524, 796, 919, 1059
Bst4CI ACNGT 6 cut(s) 244, 335, 452, 815, 1038, 1068
Bst6I CTCTTC 2 cut(s) 363, 939
BstACI GRCGYC 1 cut(s) 673
BstAUI TGTACA 2 cut(s) 644, 774
BstC8I GCNNGC 3 cut(s) 6, 171, 697
BstDEI CTNAG 7 cut(s) 93, 144, 555, 636, 980, 1008, 1080
BstDSI CCRYGG 1 cut(s) 186
BstF5I GGATG 3 cut(s) 112, 182, 1054
BstFNI CGCG 1 cut(s) 169
BstH2I RGCGCY 2 cut(s) 161, 702
BstHHI GCGC 2 cut(s) 160, 701
BstKTI GATC 7 cut(s) 76, 112, 120, 447, 634, 737, 1086
BstMAI GTCTC 2 cut(s) 632, 1011
BstMBI GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
BstMWI GCNNNNNNNGC 2 cut(s) 166, 501
BstNI CCWGG 5 cut(s) 372, 524, 796, 919, 1059
BstNSI RCATGY 3 cut(s) 52, 495, 572
BstSCI CCNGG 9 cut(s) 120, 121, 370, 522, 794, 917, 959, 1044, 1057
BstUI CGCG 1 cut(s) 169
BstV2I GAAGAC 2 cut(s) 256, 915
BstX2I RGATCY 1 cut(s) 734
BstYI RGATCY 1 cut(s) 734
BsuRI GGCC 1 cut(s) 959
BtgI CCRYGG 1 cut(s) 186
BtrI CACGTC 1 cut(s) 642
BtsCI GGATG 3 cut(s) 112, 182, 1054
BtsI GCAGTG 2 cut(s) 155, 1117
BtsIMutI CAGTG 3 cut(s) 155, 1073, 1117
Cac8I GCNNGC 3 cut(s) 6, 171, 697
CfoI GCGC 2 cut(s) 160, 701
Cfr10I RCCGGY 1 cut(s) 1019
Cfr13I GGNCC 2 cut(s) 374, 957
Cfr9I CCCGGG 1 cut(s) 121
CseI GACGC 1 cut(s) 662
Csp6I GTAC 3 cut(s) 645, 775, 1029
CspAI ACCGGT 1 cut(s) 1019
CviAII CATG 8 cut(s) 49, 187, 492, 569, 590, 648, 800, 836
CviQI GTAC 3 cut(s) 645, 775, 1029
DdeI CTNAG 7 cut(s) 93, 144, 555, 636, 980, 1008, 1080
DpnI GATC 7 cut(s) 75, 111, 119, 446, 633, 736, 1085
DpnII GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
DraIII CACNNNGTG 1 cut(s) 1068
Eam1104I CTCTTC 2 cut(s) 363, 939
EarI CTCTTC 2 cut(s) 363, 939
Eco130I CCWWGG 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 374
Eco47III AGCGCT 1 cut(s) 159
Eco88I CYCGRG 2 cut(s) 121, 952
EcoRII CCWGG 5 cut(s) 370, 522, 794, 917, 1057
EcoT14I CCWWGG 1 cut(s) 186
ErhI CCWWGG 1 cut(s) 186
Esp3I CGTCTC 2 cut(s) 632, 1011
FaeI CATG 8 cut(s) 52, 190, 495, 572, 593, 651, 803, 839
FalI AAGNNNNNCTT 2 cut(s) 54, 86
FaqI GGGAC 1 cut(s) 354
FatI CATG 8 cut(s) 48, 186, 491, 568, 589, 647, 799, 835
FbaI TGATCA 1 cut(s) 444
FblI GTMKAC 1 cut(s) 511
FokI GGATG 3 cut(s) 119, 169, 1061
FspBI CTAG 4 cut(s) 155, 174, 515, 696
GlaI GCGC 2 cut(s) 159, 700
GsuI CTGGAG 2 cut(s) 526, 545
HaeII RGCGCY 2 cut(s) 161, 702
HaeIII GGCC 1 cut(s) 959
HapII CCGG 5 cut(s) 122, 883, 960, 1020, 1046
HgaI GACGC 1 cut(s) 662
HhaI GCGC 2 cut(s) 160, 701
Hin1I GRCGYC 1 cut(s) 673
Hin1II CATG 8 cut(s) 52, 190, 495, 572, 593, 651, 803, 839
Hin6I GCGC 2 cut(s) 158, 699
HinP1I GCGC 2 cut(s) 158, 699
HindIII AAGCTT 2 cut(s) 6, 989
HinfI GANTC 4 cut(s) 40, 252, 607, 662
HpaII CCGG 5 cut(s) 122, 883, 960, 1020, 1046
HphI GGTGA 4 cut(s) 337, 571, 614, 1047
Hpy166II GTNNAC 5 cut(s) 83, 512, 562, 645, 775
Hpy188I TCNGA 3 cut(s) 94, 678, 1081
Hpy188III TCNNGA 6 cut(s) 71, 223, 635, 767, 945, 1010
Hpy8I GTNNAC 5 cut(s) 83, 512, 562, 645, 775
HpyAV CCTTC 1 cut(s) 712
HpyCH4III ACNGT 6 cut(s) 244, 335, 452, 815, 1038, 1068
HpyCH4IV ACGT 2 cut(s) 641, 1076
HpyCH4V TGCA 6 cut(s) 4, 201, 380, 464, 620, 1110
HpyF10VI GCNNNNNNNGC 2 cut(s) 166, 501
HpyF3I CTNAG 7 cut(s) 93, 144, 555, 636, 980, 1008, 1080
HpySE526I ACGT 2 cut(s) 641, 1076
Hsp92I GRCGYC 1 cut(s) 673
Hsp92II CATG 8 cut(s) 52, 190, 495, 572, 593, 651, 803, 839
HspAI GCGC 2 cut(s) 158, 699
Ksp22I TGATCA 1 cut(s) 444
Kzo9I GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
LguI GCTCTTC 1 cut(s) 939
LmnI GCTCC 1 cut(s) 797
LweI GCATC 3 cut(s) 357, 473, 1039
MaeI CTAG 4 cut(s) 155, 174, 515, 696
MaeII ACGT 2 cut(s) 641, 1076
MaeIII GTNAC 2 cut(s) 826, 1114
MalI GATC 7 cut(s) 75, 111, 119, 446, 633, 736, 1085
MboI GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
MboII GAAGA 8 cut(s) 37, 261, 350, 886, 898, 920, 926, 1025
MflI RGATCY 1 cut(s) 734
MluCI AATT 1 cut(s) 97
MlyI GAGTC 3 cut(s) 246, 616, 671
MmeI TCCRAC 1 cut(s) 762
MseI TTAA 5 cut(s) 17, 287, 393, 668, 818
MslI CAYNNNNRTG 1 cut(s) 573
MspI CCGG 5 cut(s) 122, 883, 960, 1020, 1046
MspR9I CCNGG 9 cut(s) 122, 123, 372, 524, 796, 919, 961, 1046, 1059
Mva1269I GAATGC 1 cut(s) 301
MvaI CCWGG 5 cut(s) 372, 524, 796, 919, 1059
MvnI CGCG 1 cut(s) 169
MwoI GCNNNNNNNGC 2 cut(s) 166, 501
NciI CCSGG 4 cut(s) 122, 123, 961, 1046
NcoI CCATGG 1 cut(s) 186
NdeII GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
NheI GCTAGC 1 cut(s) 695
NlaIII CATG 8 cut(s) 52, 190, 495, 572, 593, 651, 803, 839
NlaIV GGNNCC 2 cut(s) 179, 793
NmuCI GTSAC 2 cut(s) 826, 1114
NspI RCATGY 3 cut(s) 52, 495, 572
PaeR7I CTCGAG 1 cut(s) 952
PciSI GCTCTTC 1 cut(s) 939
PctI GAATGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 40
PinAI ACCGGT 1 cut(s) 1019
PleI GAGTC 3 cut(s) 246, 615, 670
PpsI GAGTC 3 cut(s) 246, 615, 670
Psp6I CCWGG 5 cut(s) 370, 522, 794, 917, 1057
PspGI CCWGG 5 cut(s) 370, 522, 794, 917, 1057
PspN4I GGNNCC 2 cut(s) 179, 793
PspPI GGNCC 2 cut(s) 374, 957
PspXI VCTCGAGB 1 cut(s) 952
PsuI RGATCY 1 cut(s) 734
RsaI GTAC 3 cut(s) 646, 776, 1030
RsaNI GTAC 3 cut(s) 645, 775, 1029
RseI CAYNNNNRTG 1 cut(s) 573
SapI GCTCTTC 1 cut(s) 939
SaqAI TTAA 5 cut(s) 17, 287, 393, 668, 818
Sau3AI GATC 7 cut(s) 73, 109, 117, 444, 631, 734, 1083
Sau96I GGNCC 2 cut(s) 374, 957
SchI GAGTC 3 cut(s) 246, 616, 671
ScrFI CCNGG 9 cut(s) 122, 123, 372, 524, 796, 919, 961, 1046, 1059
SfaNI GCATC 3 cut(s) 357, 473, 1039
Sfr274I CTCGAG 1 cut(s) 952
SinI GGWCC 1 cut(s) 374
SlaI CTCGAG 1 cut(s) 952
SmaI CCCGGG 1 cut(s) 123
SmiMI CAYNNNNRTG 1 cut(s) 573
SmlI CTYRAG 2 cut(s) 266, 952
SmoI CTYRAG 2 cut(s) 266, 952
Sse9I AATT 1 cut(s) 97
SsiI CCGC 3 cut(s) 167, 905, 938
SspMI CTAG 4 cut(s) 155, 174, 515, 696
StyD4I CCNGG 9 cut(s) 120, 121, 370, 522, 794, 917, 959, 1044, 1057
StyI CCWWGG 1 cut(s) 186
TaaI ACNGT 6 cut(s) 244, 335, 452, 815, 1038, 1068
TaiI ACGT 2 cut(s) 644, 1079
TaqI TCGA 2 cut(s) 867, 953
TasI AATT 1 cut(s) 97
TatI WGTACW 3 cut(s) 644, 774, 1028
TfiI GAWTC 1 cut(s) 40
Tru1I TTAA 5 cut(s) 17, 287, 393, 668, 818
Tru9I TTAA 5 cut(s) 17, 287, 393, 668, 818
TscAI CASTG 3 cut(s) 155, 1073, 1117
TseFI GTSAC 2 cut(s) 826, 1114
Tsp45I GTSAC 2 cut(s) 826, 1114
TspDTI ATGAA 2 cut(s) 308, 646
TspMI CCCGGG 1 cut(s) 121
TspRI CASTG 3 cut(s) 155, 1073, 1117
VpaK11BI GGWCC 1 cut(s) 374
XapI RAATTY 1 cut(s) 97
XceI RCATGY 3 cut(s) 52, 495, 572
XcmI CCANNNNNNNNNTGG 1 cut(s) 1065
XhoI CTCGAG 1 cut(s) 952
XmaI CCCGGG 1 cut(s) 121
XmiI GTMKAC 1 cut(s) 511
XspI CTAG 4 cut(s) 155, 174, 515, 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.