AT1G68100

ZIP Zinc transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011055
Physical Location & Seq
Forward (+)
25521100 .. 25524250
3151 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68100.2

Sequence Viewer

Length: 1410 bp
ATGTCGTTCTCGCTGAGAAAGCTACTGGTTCCGATTCTGGTTTTGGTACTGTTTCTGGATCTGTGCGTTGAATCCGGATTCTCTCAGTCAACGCCGGCGCGTGACGATCACGTGCATCATCACGGTGGTGGGTGTAGTCATTCTCATGACCACGACCACGACCACGATCATGATCATCATGTGAAGAAGACGACGGCGAAGGTGGAGATGAAGTTGCCGGAGGAGCTTGCTGAAGAGGAGGATATGAGATTATGTGGGTTTGGGCCTTGTCTTCATGATCACGATCACGAATCAAGTTCCACTCTTACGGGGTTTGCTCTGTGGCTTAATGCATTGGGATGCTCTCTTTTAGTTAGCTTGGCCTCACTCATCTGCCTTGTTTTGCTTCCCATTATGTTTGTTCAAGGGAAGCCATCAAAATGGTTCGTTGATTCTTTGGCTCTCTTTGGGGCAGGAGCTATGTTGGGAGATGCTTTTCTTCACCAACTGCCCCATGCTTTTGGTGGTGGCCACTCTCACTCTAATGATCACCATGAGAACCATGACCATCATGATCATTCTCATTCGGATTCGCCTTCACACTCACATTCTATACAAGATTTGTCTGTTGGATTGTCTGTTCTTGCTGGGATTGTGGTCTTCCTTCTTGTGGAGAAGTTGGTGCGGTATGTCGAAGAAAACTCATCTGGGTCCAATACTTGGGGTCATCATCACCACCACCACCATGCAGGCAGTAAGAAACTGAAGGATGAAGGCGATCATAACAACTTGGACCAACAATCTTCTTCTGATGCAATTGTAAATTCATCAGAGAAAGTCTCTGGCGGCTCTACAGATAAATCTCTCCGTAAGAGAAAGACTTCTGCTAGTGACGCTACTGATAAATCAGATTCAGGAACAGAAATTACTTCCGATGGAAAATCGGACAAACCAGAACAGGTGGAGACGCGTTCTTCGAGCCTAGTCTTTGGTTACCTCAACTTGTTCTCTGATGGTGTTCACAATTTCACTGATGGAATGGCATTAGGAAGTGCGTTTCTCATCTATGGATCAGTTGGTGGTTGGTCAAGAACTATGTTTTTACTTGCCCACGAGCTTCCCCAAGAGATAGGTGATTTTGGGATTCTAGTAAGATCAGGCTTCACAGTAACAAAAGCACTCTTCTTCAACTTCCTCTCTGCACTCGTCGCACTTGCCGGAACTGCATTGGTTTTGGTCTGGGGAAATGAACCAGGACAATCATCGTTGATTGAGGGATTCACAGCGGGAGGATTCATATACATAGCTGTTGCTGGAGTTCTTGCAGAAATGAACAACTCGGGAAAATCAACACTTAAAAACAGTGCCTGCCATTTGATATCTTTGATTCTTGGCATGAGTGTTGCTCTTTGCATCTCTCTTATAGAATGA

Protein Analysis

469

Amino Acids

50.58

Weight (kDa)

5.84

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zip PF02535 106 - 419 4.1e-46 ZIP Zinc transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011055)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68100 AT1G68100
fragaria_vesca FvH4_4g26130 FvH4_4g26130
malus_domestica MD13G1015600.v1.1 MD16G1013100.v1.1
prunus_persica Prupe.1G338200_v2.0.a1
pyrus_communis pycom13g01320 pycom16g01230
rosa_chinensis RchiOBHm_Chr4g0433701
rosa_laevigata RLG00000006737
rosa_multiflora Rmu_sc0000312.1_g000025
rosa_roxburghii Rroxscaffold_5G00375140
rosa_rugosa Rorug04G0270900.1 Rorug04G0271000.1
rosa_samantha Rh4AG325300 Rh4BG333100 Rh4CG348300 Rh4DG329700
rosa_wichuraiana Rw4G028170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 699
AccII CGCG 2 cut(s) 100, 949
AccIII TCCGGA 1 cut(s) 74
AciI CCGC 3 cut(s) 664, 825, 1265
AclWI GGATC 2 cut(s) 66, 1057
AcoI YGGCCR 1 cut(s) 508
AcsI RAATTY 1 cut(s) 802
AcuI CTGAAG 2 cut(s) 252, 764
AcvI CACGTG 1 cut(s) 112
AfaI GTAC 1 cut(s) 48
AfiI CCNNNNNNNGG 2 cut(s) 649, 699
AflIII ACRYGT 1 cut(s) 947
AgsI TTSAA 3 cut(s) 71, 404, 1168
AjnI CCWGG 1 cut(s) 1231
AleI CACNNNNGTG 1 cut(s) 126
AloI GAACNNNNNNTCC 2 cut(s) 603, 635
AluBI AGCT 6 cut(s) 22, 226, 357, 458, 1096, 1286
AluI AGCT 6 cut(s) 22, 226, 357, 458, 1096, 1286
Alw26I GTCTC 2 cut(s) 823, 938
AlwI GGATC 2 cut(s) 66, 1057
AlwNI CAGNNNCTG 1 cut(s) 1347
Ama87I CYCGRG 1 cut(s) 1318
Aor13HI TCCGGA 1 cut(s) 74
AoxI GGCC 3 cut(s) 263, 360, 508
ApoI RAATTY 1 cut(s) 802
ArsI GACNNNNNNTTYG 2 cut(s) 937, 969
Asp700I GAANNNNTTC 1 cut(s) 859
AspLEI GCGC 1 cut(s) 100
AspS9I GGNCC 3 cut(s) 263, 690, 772
AsuHPI GGTGA 4 cut(s) 473, 521, 704, 1124
AvaI CYCGRG 1 cut(s) 1318
AvaII GGWCC 2 cut(s) 690, 772
BalI TGGCCA 1 cut(s) 510
BauI CACGAG 1 cut(s) 1091
BbrPI CACGTG 1 cut(s) 112
BbsI GAAGAC 3 cut(s) 194, 263, 631
BccI CCATC 5 cut(s) 421, 555, 908, 986, 1007
BceAI ACGGC 1 cut(s) 210
BciT130I CCWGG 1 cut(s) 1233
BclI TGATCA 4 cut(s) 172, 277, 526, 553
BcoDI GTCTC 2 cut(s) 823, 938
BfaI CTAG 3 cut(s) 867, 962, 1127
BfmI CTRYAG 1 cut(s) 831
BisI GCNGC 1 cut(s) 826
BlsI GCNGC 1 cut(s) 827
Bme1390I CCNGG 1 cut(s) 1233
Bme18I GGWCC 2 cut(s) 690, 772
BmeT110I CYCGRG 1 cut(s) 1318
BmgT120I GGNCC 3 cut(s) 263, 690, 772
BmiI GGNNCC 2 cut(s) 30, 691
BmrFI CCNGG 1 cut(s) 1233
BmsI GCATC 5 cut(s) 124, 329, 460, 781, 1401
BpiI GAAGAC 3 cut(s) 194, 263, 631
BplI GAGNNNNNCTC 4 cut(s) 803, 835, 1369, 1401
BpmI CTGGAG 1 cut(s) 1314
BsaAI YACGTR 1 cut(s) 112
BsaBI GATNNNNATC 2 cut(s) 171, 282
BsaWI WCCGGW 1 cut(s) 74
BsaXI ACNNNNNCTCC 2 cut(s) 197, 227
Bsc4I CCNNNNNNNGG 2 cut(s) 649, 699
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 1 cut(s) 30
Bse8I GATNNNNATC 2 cut(s) 171, 282
BseAI TCCGGA 1 cut(s) 74
BseBI CCWGG 1 cut(s) 1233
BseGI GGATG 2 cut(s) 344, 754
BseJI GATNNNNATC 2 cut(s) 171, 282
BseLI CCNNNNNNNGG 2 cut(s) 649, 699
BseMII CTCAG 2 cut(s) 5, 98
BseNI ACTGG 1 cut(s) 30
BseRI GAGGAG 2 cut(s) 236, 251
BseYI CCCAGC 1 cut(s) 626
BsgI GTGCAG 1 cut(s) 1164
Bsh1236I CGCG 2 cut(s) 100, 949
BshFI GGCC 3 cut(s) 265, 362, 510
BsiHKCI CYCGRG 1 cut(s) 1318
BsiSI CCGG 4 cut(s) 75, 95, 218, 1197
BslI CCNNNNNNNGG 2 cut(s) 649, 699
BsmAI GTCTC 2 cut(s) 823, 938
BsmBI CGTCTC 1 cut(s) 938
BsnI GGCC 3 cut(s) 265, 362, 510
BsoBI CYCGRG 1 cut(s) 1318
Bsp13I TCCGGA 1 cut(s) 74
BspACI CCGC 3 cut(s) 664, 825, 1265
BspANI GGCC 3 cut(s) 265, 362, 510
BspCNI CTCAG 2 cut(s) 6, 97
BspEI TCCGGA 1 cut(s) 74
BspFNI CGCG 2 cut(s) 100, 949
BspHI TCATGA 4 cut(s) 145, 169, 274, 550
BspLI GGNNCC 2 cut(s) 30, 691
BspPI GGATC 2 cut(s) 66, 1057
BsrFI RCCGGY 1 cut(s) 94
BsrI ACTGG 1 cut(s) 30
BssAI RCCGGY 1 cut(s) 94
BssSI CACGAG 1 cut(s) 1091
Bst2BI CACGAG 1 cut(s) 1091
Bst2UI CCWGG 1 cut(s) 1233
Bst4CI ACNGT 4 cut(s) 51, 125, 1147, 1343
Bst6I CTCTTC 2 cut(s) 228, 1166
BstBAI YACGTR 1 cut(s) 112
BstC8I GCNNGC 4 cut(s) 96, 228, 730, 1348
BstDEI CTNAG 2 cut(s) 14, 84
BstEII GGTNACC 1 cut(s) 971
BstF5I GGATG 2 cut(s) 344, 754
BstFNI CGCG 2 cut(s) 100, 949
BstHHI GCGC 1 cut(s) 100
BstMAI GTCTC 2 cut(s) 823, 938
BstMWI GCNNNNNNNGC 5 cut(s) 19, 223, 872, 1187, 1202
BstNI CCWGG 1 cut(s) 1233
BstPI GGTNACC 1 cut(s) 971
BstSCI CCNGG 1 cut(s) 1231
BstSFI CTRYAG 1 cut(s) 831
BstUI CGCG 2 cut(s) 100, 949
BstV2I GAAGAC 3 cut(s) 194, 263, 631
BstX2I RGATCY 1 cut(s) 58
BstXI CCANNNNNNTGG 2 cut(s) 420, 500
BstYI RGATCY 1 cut(s) 58
BsuRI GGCC 3 cut(s) 265, 362, 510
BtsCI GGATG 2 cut(s) 344, 754
BtsIMutI CAGTG 2 cut(s) 1008, 1348
Cac8I GCNNGC 4 cut(s) 96, 228, 730, 1348
CaiI CAGNNNCTG 1 cut(s) 1347
CciI TCATGA 4 cut(s) 145, 169, 274, 550
CfoI GCGC 1 cut(s) 100
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 3 cut(s) 263, 690, 772
CseI GACGC 2 cut(s) 881, 955
Csp6I GTAC 1 cut(s) 47
CviQI GTAC 1 cut(s) 47
DdeI CTNAG 2 cut(s) 14, 84
EaeI YGGCCR 1 cut(s) 508
Eam1104I CTCTTC 2 cut(s) 228, 1166
EarI CTCTTC 2 cut(s) 228, 1166
Eco32I GATATC 1 cut(s) 1359
Eco47I GGWCC 2 cut(s) 690, 772
Eco57I CTGAAG 2 cut(s) 252, 764
Eco72I CACGTG 1 cut(s) 112
Eco88I CYCGRG 1 cut(s) 1318
Eco91I GGTNACC 1 cut(s) 971
EcoO65I GGTNACC 1 cut(s) 971
EcoRII CCWGG 1 cut(s) 1231
EcoRV GATATC 1 cut(s) 1359
EcoT22I ATGCAT 1 cut(s) 334
Esp3I CGTCTC 1 cut(s) 938
FauI CCCGC 1 cut(s) 1258
FbaI TGATCA 4 cut(s) 172, 277, 526, 553
Fnu4HI GCNGC 1 cut(s) 826
FokI GGATG 2 cut(s) 351, 761
Fsp4HI GCNGC 1 cut(s) 826
FspBI CTAG 3 cut(s) 867, 962, 1127
GlaI GCGC 1 cut(s) 99
GluI GCNGC 1 cut(s) 826
GsaI CCCAGC 1 cut(s) 630
GsuI CTGGAG 1 cut(s) 1314
HaeIII GGCC 3 cut(s) 265, 362, 510
HapII CCGG 4 cut(s) 75, 95, 218, 1197
HgaI GACGC 2 cut(s) 881, 955
HhaI GCGC 1 cut(s) 100
Hin6I GCGC 1 cut(s) 98
HinP1I GCGC 1 cut(s) 98
HincII GTYRAC 1 cut(s) 90
HindII GTYRAC 1 cut(s) 90
HpaII CCGG 4 cut(s) 75, 95, 218, 1197
HphI GGTGA 4 cut(s) 473, 521, 704, 1124
Hpy166II GTNNAC 2 cut(s) 90, 1000
Hpy188I TCNGA 8 cut(s) 33, 568, 790, 811, 889, 913, 925, 991
Hpy8I GTNNAC 2 cut(s) 90, 1000
Hpy99I CGWCG 2 cut(s) 196, 1190
HpyAV CCTTC 5 cut(s) 193, 585, 653, 739, 746
HpyCH4III ACNGT 4 cut(s) 51, 125, 1147, 1343
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 8 cut(s) 115, 332, 728, 794, 1181, 1205, 1304, 1392
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 223, 872, 1187, 1202
HpyF3I CTNAG 2 cut(s) 14, 84
HpySE526I ACGT 1 cut(s) 111
HspAI GCGC 1 cut(s) 98
Kpn2I TCCGGA 1 cut(s) 74
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
Ksp22I TGATCA 4 cut(s) 172, 277, 526, 553
LmnI GCTCC 2 cut(s) 223, 455
LweI GCATC 5 cut(s) 124, 329, 460, 781, 1401
MaeI CTAG 3 cut(s) 867, 962, 1127
MaeII ACGT 1 cut(s) 111
MaeIII GTNAC 4 cut(s) 101, 869, 971, 1147
MfeI CAATTG 1 cut(s) 795
MflI RGATCY 1 cut(s) 58
MlsI TGGCCA 1 cut(s) 510
MluCI AATT 4 cut(s) 795, 802, 903, 1003
MluI ACGCGT 1 cut(s) 947
MluNI TGGCCA 1 cut(s) 510
MmeI TCCRAC 1 cut(s) 589
MnlI CCTC 8 cut(s) 214, 229, 232, 373, 986, 1184, 1246, 1262
Mox20I TGGCCA 1 cut(s) 510
Mph1103I ATGCAT 1 cut(s) 334
MreI CGCCGGCG 1 cut(s) 94
MroI TCCGGA 1 cut(s) 74
MroNI GCCGGC 1 cut(s) 94
MroXI GAANNNNTTC 1 cut(s) 859
MscI TGGCCA 1 cut(s) 510
MseI TTAA 2 cut(s) 327, 1335
MslI CAYNNNNRTG 8 cut(s) 123, 126, 144, 168, 337, 418, 522, 723
Msp20I TGGCCA 1 cut(s) 510
MspA1I CMGCKG 1 cut(s) 1265
MspI CCGG 4 cut(s) 75, 95, 218, 1197
MspR9I CCNGG 1 cut(s) 1233
MunI CAATTG 1 cut(s) 795
MvaI CCWGG 1 cut(s) 1233
MvnI CGCG 2 cut(s) 100, 949
MwoI GCNNNNNNNGC 5 cut(s) 19, 223, 872, 1187, 1202
NaeI GCCGGC 1 cut(s) 96
NgoMIV GCCGGC 1 cut(s) 94
NlaIV GGNNCC 2 cut(s) 30, 691
NmuCI GTSAC 2 cut(s) 101, 869
NsiI ATGCAT 1 cut(s) 334
OliI CACNNNNGTG 1 cut(s) 126
PagI TCATGA 4 cut(s) 145, 169, 274, 550
PcsI WCGNNNNNNNCGW 1 cut(s) 953
PdiI GCCGGC 1 cut(s) 96
PdmI GAANNNNTTC 1 cut(s) 859
PflMI CCANNNNNTGG 1 cut(s) 699
PkrI GCNGC 1 cut(s) 827
PmaCI CACGTG 1 cut(s) 112
PmlI CACGTG 1 cut(s) 112
Ppu21I YACGTR 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 1231
PspCI CACGTG 1 cut(s) 112
PspEI GGTNACC 1 cut(s) 971
PspFI CCCAGC 1 cut(s) 626
PspGI CCWGG 1 cut(s) 1231
PspN4I GGNNCC 2 cut(s) 30, 691
PspPI GGNCC 3 cut(s) 263, 690, 772
PsrI GAACNNNNNNTAC 2 cut(s) 889, 921
PstNI CAGNNNCTG 1 cut(s) 1347
PsuI RGATCY 1 cut(s) 58
RsaI GTAC 1 cut(s) 48
RsaNI GTAC 1 cut(s) 47
RseI CAYNNNNRTG 8 cut(s) 123, 126, 144, 168, 337, 418, 522, 723
SaqAI TTAA 2 cut(s) 327, 1335
SatI GCNGC 1 cut(s) 826
Sau96I GGNCC 3 cut(s) 263, 690, 772
ScrFI CCNGG 1 cut(s) 1233
SfaNI GCATC 5 cut(s) 124, 329, 460, 781, 1401
SfcI CTRYAG 1 cut(s) 831
SgrAI CRCCGGYG 1 cut(s) 94
SinI GGWCC 2 cut(s) 690, 772
SmiMI CAYNNNNRTG 8 cut(s) 123, 126, 144, 168, 337, 418, 522, 723
Sse9I AATT 4 cut(s) 795, 802, 903, 1003
SsiI CCGC 3 cut(s) 664, 825, 1265
SspMI CTAG 3 cut(s) 867, 962, 1127
StyD4I CCNGG 1 cut(s) 1231
TaaI ACNGT 4 cut(s) 51, 125, 1147, 1343
TaiI ACGT 1 cut(s) 114
TaqI TCGA 2 cut(s) 672, 956
TasI AATT 4 cut(s) 795, 802, 903, 1003
TauI GCSGC 1 cut(s) 828
Tru1I TTAA 2 cut(s) 327, 1335
Tru9I TTAA 2 cut(s) 327, 1335
TscAI CASTG 2 cut(s) 1015, 1348
TseFI GTSAC 2 cut(s) 101, 869
Tsp45I GTSAC 2 cut(s) 101, 869
TspDTI ATGAA 7 cut(s) 224, 263, 765, 795, 1242, 1264, 1325
TspGWI ACGGA 1 cut(s) 836
TspRI CASTG 2 cut(s) 1015, 1348
Van91I CCANNNNNTGG 1 cut(s) 699
VpaK11BI GGWCC 2 cut(s) 690, 772
XapI RAATTY 1 cut(s) 802
XcmI CCANNNNNNNNNTGG 1 cut(s) 500
XmnI GAANNNNTTC 1 cut(s) 859
XspI CTAG 3 cut(s) 867, 962, 1127
Zsp2I ATGCAT 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.