AT1G68360

Zinc finger protein 6-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25621533 .. 25622593
1061 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68360.1

Sequence Viewer

Length: 735 bp
ATGGAGGAGCTGGATTTTAGTTCAAAAACAACAACTTCTCGTCTAAAGCTATTTGGATTTAGTGTTGATGGAGAAGAAGATTTCTCCGATCAATCAGTCAAAACTAACCTATCTTCTGTATCACCGGAACGTGGCGAGTTTCCGGCAGGATCTTCCGGAAGAAGTGGCGGTGGTGTACGAAGCCGAGGCGGAGGAGGAGGAGGAGGAGAACGTAAGTATGAGTGTCAGTATTGTTGTAGAGAGTTTGGTAACTCACAAGCCTTAGGTGGTCACCAAAACGCTCACAAGAAAGAGCGTCAACAGCTTAAACGTGCTCAGCTTCAAGCTACACGAAACGCAGCCGCAAATTTCTCAAACGCTGGATCAGCGTCTCAGTTTTTAAGGAATCCTATAGTCTCTGCTTTTGCTCCTCCGCCTCATCTTTTATCATCATCCGCCGTGCCTCAGCCTATGGGAGGTCCTTGGATGTATCTTCCACGTGTTTCTCCATCTCAACTTCACGTGTCTCATGGCTGCGTCATCCAAGATGGTTCGGGTGGTGCGGGTGCTGGTGGGTTCTCGTACGAGTATGGGGCTCGTGATTCAGGGTTTGGAGTAGTTGGGGCTCAGATGAGACATGTTCAGGCCCATGGGCCGAGACCATCGGTTAATGGGTTTTCAAGAGAAGTAGGAACTACTTTTGATGATGGTTTAGGGTTGGATTTGCATCTCAGTCTTGCACCTGCTGGTCATTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

244

Amino Acids

25.6

Weight (kDa)

8.39

Isoelectric Point (pI)

48.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68360
fragaria_vesca FvH4_4g27020
malus_domestica MD13G1039200.v1.1 MD16G1040100.v1.1
prunus_persica Prupe.1G314000_v2.0.a1
pyrus_communis pycom13g03370 pycom16g03480
rosa_chinensis RchiOBHm_Chr4g0434821
rosa_laevigata RLG00000006645
rosa_multiflora Rmu_sc0000179.1_g000005
rosa_roxburghii Rroxscaffold_5G00376030
rosa_rugosa Rorug04G0279200
rosa_samantha Rh4AG335200 Rh4BG343700 Rh4CG358100 Rh4DG337600
rosa_wichuraiana Rw4G029230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 730
Acc36I ACCTGC 1 cut(s) 730
AccIII TCCGGA 1 cut(s) 155
AciI CCGC 6 cut(s) 168, 189, 342, 413, 435, 542
AclWI GGATC 2 cut(s) 157, 370
AcsI RAATTY 1 cut(s) 346
AcvI CACGTG 2 cut(s) 479, 502
AfaI GTAC 2 cut(s) 177, 563
AfiI CCNNNNNNNGG 2 cut(s) 131, 455
AflIII ACRYGT 3 cut(s) 478, 501, 616
AgsI TTSAA 3 cut(s) 24, 323, 660
AluBI AGCT 5 cut(s) 10, 49, 304, 319, 326
AluI AGCT 5 cut(s) 10, 49, 304, 319, 326
Alw21I GWGCWC 1 cut(s) 316
Alw26I GTCTC 5 cut(s) 375, 400, 510, 607, 631
AlwI GGATC 2 cut(s) 157, 370
Aor13HI TCCGGA 1 cut(s) 155
AoxI GGCC 2 cut(s) 624, 632
ApeKI GCWGC 2 cut(s) 338, 513
ApoI RAATTY 1 cut(s) 346
AspS9I GGNCC 3 cut(s) 458, 625, 632
AsuHPI GGTGA 2 cut(s) 114, 263
AvaII GGWCC 1 cut(s) 458
AxyI CCTNAGG 1 cut(s) 262
BanII GRGCYC 2 cut(s) 577, 607
BauI CACGAG 1 cut(s) 576
BbrPI CACGTG 2 cut(s) 479, 502
Bbv12I GWGCWC 1 cut(s) 316
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 2 cut(s) 350, 500
BccI CCATC 5 cut(s) 62, 496, 521, 649, 680
BceAI ACGGC 1 cut(s) 422
BcoDI GTCTC 5 cut(s) 375, 400, 510, 607, 631
BfmI CTRYAG 1 cut(s) 390
BfuAI ACCTGC 1 cut(s) 730
BisI GCNGC 3 cut(s) 339, 342, 514
BlpI GCTNAGC 1 cut(s) 315
BlsI GCNGC 3 cut(s) 340, 343, 515
Bme18I GGWCC 1 cut(s) 458
BmgT120I GGNCC 3 cut(s) 458, 625, 632
BmsI GCATC 1 cut(s) 715
Bpu10I CCTNAGC 1 cut(s) 444
Bpu1102I GCTNAGC 1 cut(s) 315
BsaAI YACGTR 2 cut(s) 479, 502
BsaBI GATNNNNATC 1 cut(s) 705
BsaI GGTCTC 1 cut(s) 631
BsaJI CCNNGG 3 cut(s) 184, 461, 628
BsaWI WCCGGW 2 cut(s) 124, 155
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 455
Bse21I CCTNAGG 1 cut(s) 262
Bse8I GATNNNNATC 1 cut(s) 705
BseAI TCCGGA 1 cut(s) 155
BseDI CCNNGG 3 cut(s) 184, 461, 628
BseGI GGATG 3 cut(s) 431, 471, 519
BseJI GATNNNNATC 1 cut(s) 705
BseLI CCNNNNNNNGG 2 cut(s) 131, 455
BseMII CTCAG 5 cut(s) 329, 386, 458, 620, 724
BseRI GAGGAG 7 cut(s) 20, 207, 210, 213, 216, 219, 399
BseXI GCAGC 2 cut(s) 350, 500
BshFI GGCC 2 cut(s) 626, 634
BsiHKAI GWGCWC 1 cut(s) 316
BsiSI CCGG 3 cut(s) 125, 143, 156
BsiWI CGTACG 1 cut(s) 561
BslI CCNNNNNNNGG 2 cut(s) 131, 455
BsmAI GTCTC 5 cut(s) 375, 400, 510, 607, 631
BsmBI CGTCTC 1 cut(s) 375
BsnI GGCC 2 cut(s) 626, 634
Bso31I GGTCTC 1 cut(s) 631
Bsp1286I GDGCHC 3 cut(s) 316, 577, 607
Bsp13I TCCGGA 1 cut(s) 155
Bsp143I GATC 3 cut(s) 88, 149, 362
Bsp1720I GCTNAGC 1 cut(s) 315
Bsp19I CCATGG 1 cut(s) 628
BspACI CCGC 6 cut(s) 168, 189, 342, 413, 435, 542
BspANI GGCC 2 cut(s) 626, 634
BspCNI CTCAG 5 cut(s) 328, 385, 457, 619, 723
BspEI TCCGGA 1 cut(s) 155
BspMI ACCTGC 1 cut(s) 730
BspPI GGATC 2 cut(s) 157, 370
BspTNI GGTCTC 1 cut(s) 631
BssECI CCNNGG 3 cut(s) 184, 461, 628
BssMI GATC 3 cut(s) 88, 149, 362
BssSI CACGAG 1 cut(s) 576
BssT1I CCWWGG 2 cut(s) 461, 628
Bst2BI CACGAG 1 cut(s) 576
BstBAI YACGTR 2 cut(s) 479, 502
BstDEI CTNAG 6 cut(s) 262, 315, 372, 444, 606, 710
BstDSI CCRYGG 1 cut(s) 628
BstEII GGTNACC 1 cut(s) 269
BstENI CCTNNNNNAGG 1 cut(s) 453
BstF5I GGATG 3 cut(s) 431, 471, 519
BstKTI GATC 3 cut(s) 91, 152, 365
BstMAI GTCTC 5 cut(s) 375, 400, 510, 607, 631
BstMBI GATC 3 cut(s) 88, 149, 362
BstMWI GCNNNNNNNGC 2 cut(s) 301, 365
BstNSI RCATGY 1 cut(s) 620
BstPI GGTNACC 1 cut(s) 269
BstSFI CTRYAG 1 cut(s) 390
BstV1I GCAGC 2 cut(s) 350, 500
BstX2I RGATCY 1 cut(s) 149
BstYI RGATCY 1 cut(s) 149
Bsu36I CCTNAGG 1 cut(s) 262
BsuRI GGCC 2 cut(s) 626, 634
BtgI CCRYGG 1 cut(s) 628
BtsCI GGATG 3 cut(s) 431, 471, 519
BveI ACCTGC 1 cut(s) 730
Cfr13I GGNCC 3 cut(s) 458, 625, 632
CseI GACGC 3 cut(s) 284, 357, 505
Csp6I GTAC 2 cut(s) 176, 562
CviAII CATG 3 cut(s) 509, 617, 629
CviQI GTAC 2 cut(s) 176, 562
DdeI CTNAG 6 cut(s) 262, 315, 372, 444, 606, 710
DpnI GATC 3 cut(s) 90, 151, 364
DpnII GATC 3 cut(s) 88, 149, 362
EciI GGCGGA 3 cut(s) 204, 402, 424
Eco130I CCWWGG 2 cut(s) 461, 628
Eco24I GRGCYC 2 cut(s) 577, 607
Eco31I GGTCTC 1 cut(s) 631
Eco47I GGWCC 1 cut(s) 458
Eco72I CACGTG 2 cut(s) 479, 502
Eco81I CCTNAGG 1 cut(s) 262
Eco91I GGTNACC 1 cut(s) 269
EcoNI CCTNNNNNAGG 1 cut(s) 453
EcoO109I RGGNCCY 1 cut(s) 458
EcoO65I GGTNACC 1 cut(s) 269
EcoT14I CCWWGG 2 cut(s) 461, 628
EcoT38I GRGCYC 2 cut(s) 577, 607
ErhI CCWWGG 2 cut(s) 461, 628
Esp3I CGTCTC 1 cut(s) 375
FaeI CATG 3 cut(s) 512, 620, 632
FaiI YATR 7 cut(s) 219, 392, 452, 510, 570, 618, 630
FatI CATG 3 cut(s) 508, 616, 628
FauI CCCGC 1 cut(s) 535
Fnu4HI GCNGC 3 cut(s) 339, 342, 514
FokI GGATG 3 cut(s) 418, 478, 506
FriOI GRGCYC 2 cut(s) 577, 607
Fsp4HI GCNGC 3 cut(s) 339, 342, 514
GluI GCNGC 3 cut(s) 339, 342, 514
HaeIII GGCC 2 cut(s) 626, 634
HapII CCGG 3 cut(s) 125, 143, 156
HgaI GACGC 3 cut(s) 284, 357, 505
Hin1II CATG 3 cut(s) 512, 620, 632
HincII GTYRAC 1 cut(s) 299
HindII GTYRAC 1 cut(s) 299
HinfI GANTC 2 cut(s) 385, 581
HpaII CCGG 3 cut(s) 125, 143, 156
HphI GGTGA 2 cut(s) 114, 263
Hpy166II GTNNAC 2 cut(s) 176, 299
Hpy188I TCNGA 2 cut(s) 88, 609
Hpy188III TCNNGA 3 cut(s) 156, 578, 660
Hpy8I GTNNAC 2 cut(s) 176, 299
HpyCH4IV ACGT 5 cut(s) 130, 211, 310, 478, 501
HpyCH4V TGCA 2 cut(s) 706, 719
HpyF10VI GCNNNNNNNGC 2 cut(s) 301, 365
HpyF3I CTNAG 6 cut(s) 262, 315, 372, 444, 606, 710
HpySE526I ACGT 5 cut(s) 130, 211, 310, 478, 501
Hsp92II CATG 3 cut(s) 512, 620, 632
Kpn2I TCCGGA 1 cut(s) 155
Kzo9I GATC 3 cut(s) 88, 149, 362
LmnI GCTCC 2 cut(s) 7, 412
LpnPI CCDG 9 cut(s) 132, 138, 156, 169, 345, 534, 570, 608, 711
Lsp1109I GCAGC 2 cut(s) 350, 500
LweI GCATC 1 cut(s) 715
MaeII ACGT 5 cut(s) 130, 211, 310, 478, 501
MaeIII GTNAC 2 cut(s) 248, 269
MalI GATC 3 cut(s) 90, 151, 364
MboI GATC 3 cut(s) 88, 149, 362
MboII GAAGA 6 cut(s) 86, 89, 105, 144, 171, 464
MflI RGATCY 1 cut(s) 149
MhlI GDGCHC 3 cut(s) 316, 577, 607
MluCI AATT 1 cut(s) 346
MmeI TCCRAC 1 cut(s) 678
MroI TCCGGA 1 cut(s) 155
MseI TTAA 3 cut(s) 306, 380, 648
MspI CCGG 3 cut(s) 125, 143, 156
MwoI GCNNNNNNNGC 2 cut(s) 301, 365
NcoI CCATGG 1 cut(s) 628
NdeII GATC 3 cut(s) 88, 149, 362
NlaIII CATG 3 cut(s) 512, 620, 632
NmeAIII GCCGAG 2 cut(s) 209, 660
NmuCI GTSAC 1 cut(s) 269
NspI RCATGY 1 cut(s) 620
PaqCI CACCTGC 1 cut(s) 730
PciI ACATGT 1 cut(s) 616
PfeI GAWTC 2 cut(s) 385, 581
Pfl23II CGTACG 1 cut(s) 561
PkrI GCNGC 3 cut(s) 340, 343, 515
PmaCI CACGTG 2 cut(s) 479, 502
PmlI CACGTG 2 cut(s) 479, 502
Ppu21I YACGTR 2 cut(s) 479, 502
PpuMI RGGWCCY 1 cut(s) 458
PscI ACATGT 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 458
PspCI CACGTG 2 cut(s) 479, 502
PspEI GGTNACC 1 cut(s) 269
PspLI CGTACG 1 cut(s) 561
PspPI GGNCC 3 cut(s) 458, 625, 632
PspPPI RGGWCCY 1 cut(s) 458
PsuI RGATCY 1 cut(s) 149
RsaI GTAC 2 cut(s) 177, 563
RsaNI GTAC 2 cut(s) 176, 562
SaqAI TTAA 3 cut(s) 306, 380, 648
SatI GCNGC 3 cut(s) 339, 342, 514
Sau3AI GATC 3 cut(s) 88, 149, 362
Sau96I GGNCC 3 cut(s) 458, 625, 632
SduI GDGCHC 3 cut(s) 316, 577, 607
SfaNI GCATC 1 cut(s) 715
SfcI CTRYAG 1 cut(s) 390
SinI GGWCC 1 cut(s) 458
Sse9I AATT 1 cut(s) 346
SsiI CCGC 6 cut(s) 168, 189, 342, 413, 435, 542
StyI CCWWGG 2 cut(s) 461, 628
TaiI ACGT 5 cut(s) 133, 214, 313, 481, 504
TasI AATT 1 cut(s) 346
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 2 cut(s) 385, 581
Tru1I TTAA 3 cut(s) 306, 380, 648
Tru9I TTAA 3 cut(s) 306, 380, 648
TseFI GTSAC 1 cut(s) 269
TseI GCWGC 2 cut(s) 338, 513
Tsp45I GTSAC 1 cut(s) 269
VpaK11BI GGWCC 1 cut(s) 458
XagI CCTNNNNNAGG 1 cut(s) 453
XapI RAATTY 1 cut(s) 346
XceI RCATGY 1 cut(s) 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.