AT1G68940

Modified RING finger domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25921453 .. 25926075
4623 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G68940.3

Sequence Viewer

Length: 3261 bp
ATGTCGAGTCAAGAAGAAGATATAGGCACAAGTGATACACTAATTGGATCGTTGTTGAGGTCCATTTCTGAGGTAATCACATCCTTGGAGTCCTTACAAGCAGAAACAGAGAGGTTCCTCGAATGCGCTTGCTACTTTTATCGAGTTTCAGTTGTGTTAATGGAGATACAGACAGCAGAGAGCAACGTCATATGTTCAATTGATATTTTTGAATCACTATCCGATAGTGTAGATGTTGCCAAGAAACTGGTTGAGAAATCTCAAGAAAGCAACGAAGCCGAATCAACTACTGATCTGAGAAGCATTGAGGCAGGTTTTGAAGGCGTTGTAAAGCAGATGGGTGAAACTTTGCAGTCCATACCTGAATCAACATTCGACGAGGAAGAATATATAGGAGTTGTTATTCAGTCTCTTTCAAATGAGATGCAAAATGCTACCATTGGAGATGGTAGTAAAAGTGAGATGATAAACAATGGGCAGCAGAAGATTTCTGCAAAGCATACACCGGATATTGTGTCTGAGCAAATGGAGGAAGACCTCTATCCCACTGATCCTGAATTTTCCTATGAAAGTTACATGATGTATAGTGAATCACAATCACAAATGACTGATATACCAGATATCCCAAGCAAGAGCACAGATGTTAGCCGCCAGAGAAAGCATGGAAATCATAGTGAATCACAATCACTAGTAACCGAAATACCAGATATCCCAAGCCAGAGCACAAATGTTAGCAGCCAGAGAAAGCATGGGAATCTCAGTAAATCACAATCACAAAGTACCGAAATACCAGATATCCCAAGCCAGAGCTCGAATGCTAGCAGCCAGAGAAAGTATGGAAATCTTAGTGAATCATTGTCAATGTTACCACAGGTGACACAGTTCATGGAACCTCCATACCAAGCTTTCATCTGCCCGTTGACCAAAGAGATAATGGAAGATCCAGTCACCACAGAAACAGGAGTAACCTGCGAAAGACAAGCAGTAATAGAGTGGTTTGACAGTTTTGGAAACTCCGATGAGATCAACTGTCCAGTTACGGGTCAAAAGTTGACCACTGAATTAAGTGCAAATGTTGTCTTGAAAACCATCATTCAGGAATGGAAAGTACGTAACGAGGCAGCAAGAATCAAAGTGGCTCATGCAGCTTTATCCTTAGGCGGTTCAGAAAGTATGGTCATCGACGCGTTAAGAGATCTGCAAATGACCTGTGAAGGGAAAGAGTACAACAAGGTACAAGTCCGTGAAGCTGGGATCATTCAGCTGCTTGATAGATACCTGACGTACAGAAGTAAAGATGTGAGGTTTGAACTACTAAAGTTCTTAAGGACACTGGCAGATGAAGAAACTGATGACGGAAAGGAAATGATTGTGAAGACAATAACTATGTCATGCGTAATCAAACTTTTGGGAAGCAGTCACCAGCCTGTAAGACATGCAGCACAAGCCTTACTGCTTGAGCTTTCAAAATCCCAACATGCATGTGAGAAGATTGGGACTGCTAGAGGGGCGATACTAATGTTAGTTACCGCAAAGTATAACAGGGAGTTGGATTCCTTTGCATCTGAAACATCAGACCAAATCTTAAGAAATTTAGAGAAGTGTCCTGAGAACATCAAGCAAATGGCAGAGAGTGGACTATTGGAACCTCTTCTGGGCCATCTAGCAGAAGGGAGTGAGGAGACTCAGGTGGCAATGGCTGCGTACCTTGTGGAAATTGATATTGGACATGAGAAAAAAACTTATGTAGCTGAGAAGGCTTGCCCTGCGCTCATTGGGCTGGTGCAAAGTGAAAATATTGACGCTAGAAGAGCCGCCTTCAAAGCTCTTGCTCATATTTCATTGTATCACCCCAACAACAAGATACTGGTAGAGGTCGGCATCATCAAGATCATGGTCGAAGAAATGTTCACGAAGCGAGTGTTTAGTGATCTGATGAACTCCAGGAACGAAGCTGCTACAATACTTGCAAACATACTGGAATCTGGGCTGGAACATGAGACCTTTGAGGTGAATACTCATGGCCACACATTAGGCTCGGATTACTTTGTATACAACATCATCCACATGCTCAAGAACTCAAGCCCAGATGATCTTAACATTGATTTGATCAGGATTCTCCTATCCTTGTCCAAATCACCTAGAGCGATGGCAACAATCGTCTCAGTGATCAAAGAAACCGACGCAAGCTTTGCCATGATAGAACTCATCAACAATCCTCATGACGAATTAGGGGTTGGAGCATTAAAACTTCTAATAGCCCTTACCCCCTACATCGGTCACACGCTATCAGAGAGACTATGTAAAACTAGAGGTCAGCCAGAGAATCTTATCCAGTGCCCAGTAGAAGCAAATCAAATAACAGAAAAGCATGCTGTTTCAGCCAAGTTACTTGCTAAACTTCCTCATCAGAATCTGACTCTTAATTTAGCACTGGTCAACGAGAGCATAGTGTCTGAAATTCTGCATGCAATCCATCTGATTCAAAGAAGTGGAGCACGAACAAGCAGGTATGCAACTGATTTCTTGGAAGGTCTCGTTGGCATCTTAGTGAGATTCACAACTACACTGTACGAGCCCCAAATGATGTACCTAGCCAGAAACCACGATTTGACATCAGTGTTTGTTGATTTATTGATGAAAACATCAAGCGACGAAGTTCAAAGGTTATCAGCAACTGGACTAGAAAATCTATCATCTACAACTATGACTTTATCGAGGCCACCCCAACCTAGGAGCACAAAATTCATGGGATCACTGAGTATGCCTAGGTCTTTCTCCCTCCGTTCATCCAAAAAGAAGCAGATAGAGATCTGTGCAATCCACAGAGGCGTATGTTCTGCAAAAAACACATTTTGCTTGGTTGAAGCAAATGCAATCACAAAGCTTCTAGCATGTTTGCAGAGTGATAAAGTGGAGGTAGTGGAGTCAGCATTAGCTGCTATATGCACGCTATTAGATGACAAGGTCGAAGTGGAGAAGAGTTTAAGCATGCTGAGTGAAATGAATGCAGTACAACTAATTCTAAATGCAGTCAAGGAACACAAGAAAGAGTCTCTATTGCAGAAAGCATTTTGGATGATTGACAAGTTCATTATTAGAGGCGGAGATAAGTATGCCAGCGAAATATCACAAGATAGGATGTTGTCAGGTATGTTGGTTAGTGCCTTCCATCGTGGAGATGGTAACACAAGGCAGATGGCAGAAAATATACTGAGGCGTTTGGACAAGATGCCAAGTTTCTCTACTTATATCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1086

Amino Acids

120.75

Weight (kDa)

5.21

Isoelectric Point (pI)

51.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 249 - 319 1e-10 U-box domain
Kelch_FKB95 PF25210 1009 - 1039 1.6e-06 FKB95, Kelch-repeats domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012314)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 302, 977, 2499
AccI GTMKAC 1 cut(s) 2052
AccII CGCG 1 cut(s) 1187
AciI CCGC 5 cut(s) 649, 1161, 1530, 1815, 3105
AclWI GGATC 5 cut(s) 55, 545, 935, 1262, 2761
AcoI YGGCCR 1 cut(s) 2023
AcsI RAATTY 4 cut(s) 557, 1591, 2460, 2744
AfaI GTAC 9 cut(s) 781, 1110, 1226, 1236, 1286, 1706, 2573, 2591, 3015
AfiI CCNNNNNNNGG 5 cut(s) 1040, 1215, 1655, 2276, 2733
AflII CTTAAG 2 cut(s) 1324, 1585
AflIII ACRYGT 1 cut(s) 1185
AhlI ACTAGT 1 cut(s) 688
AjnI CCWGG 1 cut(s) 1943
AjuI GAANNNNNNNTTGG 6 cut(s) 1707, 1739, 2220, 2252, 2523, 2555
Alw21I GWGCWC 5 cut(s) 638, 725, 812, 2500, 2741
Alw26I GTCTC 7 cut(s) 414, 1676, 1994, 2167, 2290, 2540, 3060
AlwI GGATC 5 cut(s) 55, 545, 935, 1262, 2761
AlwNI CAGNNNCTG 2 cut(s) 2416, 2678
AoxI GGCC 3 cut(s) 1657, 2023, 2720
ApoI RAATTY 4 cut(s) 557, 1591, 2460, 2744
ArsI GACNNNNNNTTYG 2 cut(s) 2174, 2206
Asp700I GAANNNNTTC 1 cut(s) 1650
AspA2I CCTAGG 2 cut(s) 2732, 2768
AspLEI GCGC 2 cut(s) 128, 1771
AspS9I GGNCC 2 cut(s) 60, 1657
AsuHPI GGTGA 7 cut(s) 353, 886, 940, 1412, 1841, 2023, 2130
AsuNHI GCTAGC 1 cut(s) 818
AvaII GGWCC 1 cut(s) 60
AvrII CCTAGG 2 cut(s) 2732, 2768
AxyI CCTNAGG 1 cut(s) 1156
BaeGI GKGCMC 1 cut(s) 2342
BaeI ACNNNNGTAYC 2 cut(s) 1505, 1538
BalI TGGCCA 1 cut(s) 2025
BanII GRGCYC 2 cut(s) 812, 2580
BbsI GAAGAC 2 cut(s) 540, 1382
Bbv12I GWGCWC 5 cut(s) 638, 725, 812, 2500, 2741
BccI CCATC 9 cut(s) 331, 440, 1097, 1668, 2143, 2484, 3176, 3180, 3193
BciT130I CCWGG 1 cut(s) 1945
BclI TGATCA 2 cut(s) 2109, 2169
BcoDI GTCTC 7 cut(s) 414, 1676, 1994, 2167, 2290, 2540, 3060
BcuI ACTAGT 1 cut(s) 688
BfrI CTTAAG 2 cut(s) 1324, 1585
BfuAI ACCTGC 3 cut(s) 302, 977, 2499
BglII AGATCT 2 cut(s) 1195, 2811
BlnI CCTAGG 2 cut(s) 2732, 2768
Bme1390I CCNGG 1 cut(s) 1945
Bme18I GGWCC 1 cut(s) 60
BmgT120I GGNCC 2 cut(s) 60, 1657
BmiI GGNNCC 3 cut(s) 116, 891, 1647
BmrFI CCNGG 1 cut(s) 1945
BmrI ACTGGG 1 cut(s) 2336
BmsI GCATC 5 cut(s) 414, 1571, 1890, 2553, 3222
BmtI GCTAGC 1 cut(s) 822
BmuI ACTGGG 1 cut(s) 2336
BpiI GAAGAC 2 cut(s) 540, 1382
BpmI CTGGAG 1 cut(s) 1927
BpuEI CTTGAG 4 cut(s) 246, 1478, 2057, 2065
BsaAI YACGTR 1 cut(s) 1112
BsaBI GATNNNNATC 1 cut(s) 2810
BsaI GGTCTC 2 cut(s) 1994, 2540
BsaJI CCNNGG 3 cut(s) 84, 2732, 2768
BsaWI WCCGGW 1 cut(s) 505
Bsc4I CCNNNNNNNGG 5 cut(s) 1040, 1215, 1655, 2276, 2733
Bse21I CCTNAGG 1 cut(s) 1156
Bse3DI GCAATG 1 cut(s) 1701
Bse8I GATNNNNATC 1 cut(s) 2810
BseBI CCWGG 1 cut(s) 1945
BseDI CCNNGG 3 cut(s) 84, 2732, 2768
BseGI GGATG 5 cut(s) 80, 2061, 2789, 3084, 3147
BseJI GATNNNNATC 1 cut(s) 2810
BseLI CCNNNNNNNGG 5 cut(s) 1040, 1215, 1655, 2276, 2733
BseMI GCAATG 1 cut(s) 1701
BseRI GAGGAG 1 cut(s) 1694
BseSI GKGCMC 1 cut(s) 2342
BseYI CCCAGC 1 cut(s) 1250
Bsh1236I CGCG 1 cut(s) 1187
BshFI GGCC 3 cut(s) 1659, 2025, 2722
BsiHKAI GWGCWC 5 cut(s) 638, 725, 812, 2500, 2741
BsiSI CCGG 1 cut(s) 506
BslFI GGGAC 1 cut(s) 1510
BslI CCNNNNNNNGG 5 cut(s) 1040, 1215, 1655, 2276, 2733
BsmAI GTCTC 7 cut(s) 414, 1676, 1994, 2167, 2290, 2540, 3060
BsmBI CGTCTC 1 cut(s) 2167
BsmFI GGGAC 1 cut(s) 1510
BsmI GAATGC 3 cut(s) 128, 820, 3013
BsnI GGCC 3 cut(s) 1659, 2025, 2722
Bso31I GGTCTC 2 cut(s) 1994, 2540
Bsp1286I GDGCHC 7 cut(s) 638, 725, 812, 2342, 2500, 2580, 2741
BspACI CCGC 5 cut(s) 649, 1161, 1530, 1815, 3105
BspANI GGCC 3 cut(s) 1659, 2025, 2722
BspFNI CGCG 1 cut(s) 1187
BspHI TCATGA 1 cut(s) 2221
BspLI GGNNCC 3 cut(s) 116, 891, 1647
BspMI ACCTGC 3 cut(s) 302, 977, 2499
BspOI GCTAGC 1 cut(s) 822
BspPI GGATC 5 cut(s) 55, 545, 935, 1262, 2761
BspQI GCTCTTC 1 cut(s) 1804
BspTI CTTAAG 2 cut(s) 1324, 1585
BspTNI GGTCTC 2 cut(s) 1994, 2540
BsrDI GCAATG 1 cut(s) 1701
BssECI CCNNGG 3 cut(s) 84, 2732, 2768
BssNAI GTATAC 1 cut(s) 2053
BssT1I CCWWGG 3 cut(s) 84, 2732, 2768
Bst1107I GTATAC 1 cut(s) 2053
Bst2UI CCWGG 1 cut(s) 1945
Bst4CI ACNGT 4 cut(s) 882, 1004, 1031, 2571
Bst6I CTCTTC 3 cut(s) 1656, 1804, 2975
BstAFI CTTAAG 2 cut(s) 1324, 1585
BstAPI GCANNNNNTGC 3 cut(s) 1700, 2192, 2939
BstBAI YACGTR 1 cut(s) 1112
BstC8I GCNNGC 9 cut(s) 130, 820, 1762, 2188, 2373, 2469, 2951, 2993, 3121
BstF5I GGATG 5 cut(s) 80, 2061, 2789, 3084, 3147
BstFNI CGCG 1 cut(s) 1187
BstHHI GCGC 2 cut(s) 128, 1771
BstMAI GTCTC 7 cut(s) 414, 1676, 1994, 2167, 2290, 2540, 3060
BstNI CCWGG 1 cut(s) 1945
BstNSI RCATGY 8 cut(s) 1439, 1481, 1485, 2071, 2375, 2471, 2898, 2995
BstSCI CCNGG 1 cut(s) 1943
BstSLI GKGCMC 1 cut(s) 2342
BstSNI TACGTA 1 cut(s) 1112
BstUI CGCG 1 cut(s) 1187
BstV2I GAAGAC 2 cut(s) 540, 1382
BstX2I RGATCY 3 cut(s) 940, 1195, 2811
BstXI CCANNNNNNTGG 1 cut(s) 247
BstYI RGATCY 3 cut(s) 940, 1195, 2811
BstZ17I GTATAC 1 cut(s) 2053
Bsu36I CCTNAGG 1 cut(s) 1156
BsuRI GGCC 3 cut(s) 1659, 2025, 2722
BtgZI GCGATG 1 cut(s) 2162
BtsCI GGATG 5 cut(s) 80, 2061, 2789, 3084, 3147
BtsIMutI CAGTG 9 cut(s) 546, 1056, 1331, 2172, 2342, 2432, 2567, 2625, 2756
BveI ACCTGC 3 cut(s) 302, 977, 2499
Cac8I GCNNGC 9 cut(s) 130, 820, 1762, 2188, 2373, 2469, 2951, 2993, 3121
CaiI CAGNNNCTG 2 cut(s) 2416, 2678
CciI TCATGA 1 cut(s) 2221
CfoI GCGC 2 cut(s) 128, 1771
Cfr13I GGNCC 2 cut(s) 60, 1657
CseI GACGC 3 cut(s) 1193, 1811, 2192
Csp6I GTAC 9 cut(s) 780, 1109, 1225, 1235, 1285, 1705, 2572, 2590, 3014
CviQI GTAC 9 cut(s) 780, 1109, 1225, 1235, 1285, 1705, 2572, 2590, 3014
EaeI YGGCCR 1 cut(s) 2023
Eam1104I CTCTTC 3 cut(s) 1656, 1804, 2975
EarI CTCTTC 3 cut(s) 1656, 1804, 2975
EciI GGCGGA 1 cut(s) 3120
Ecl136II GAGCTC 1 cut(s) 810
Eco105I TACGTA 1 cut(s) 1112
Eco130I CCWWGG 3 cut(s) 84, 2732, 2768
Eco24I GRGCYC 2 cut(s) 812, 2580
Eco31I GGTCTC 2 cut(s) 1994, 2540
Eco32I GATATC 3 cut(s) 622, 709, 796
Eco47I GGWCC 1 cut(s) 60
Eco53kI GAGCTC 1 cut(s) 810
Eco81I CCTNAGG 1 cut(s) 1156
EcoICRI GAGCTC 1 cut(s) 810
EcoRII CCWGG 1 cut(s) 1943
EcoRV GATATC 3 cut(s) 622, 709, 796
EcoT14I CCWWGG 3 cut(s) 84, 2732, 2768
EcoT22I ATGCAT 1 cut(s) 1483
EcoT38I GRGCYC 2 cut(s) 812, 2580
ErhI CCWWGG 3 cut(s) 84, 2732, 2768
Esp3I CGTCTC 1 cut(s) 2167
FaqI GGGAC 1 cut(s) 1510
FauNDI CATATG 1 cut(s) 191
FbaI TGATCA 2 cut(s) 2109, 2169
FblI GTMKAC 1 cut(s) 2052
FokI GGATG 5 cut(s) 67, 2048, 2776, 3091, 3154
FriOI GRGCYC 2 cut(s) 812, 2580
GlaI GCGC 2 cut(s) 127, 1770
GsaI CCCAGC 1 cut(s) 1254
GsuI CTGGAG 1 cut(s) 1927
HaeIII GGCC 3 cut(s) 1659, 2025, 2722
HapII CCGG 1 cut(s) 506
HgaI GACGC 3 cut(s) 1193, 1811, 2192
HhaI GCGC 2 cut(s) 128, 1771
Hin6I GCGC 2 cut(s) 126, 1769
HinP1I GCGC 2 cut(s) 126, 1769
HincII GTYRAC 3 cut(s) 921, 1053, 2440
HindII GTYRAC 3 cut(s) 921, 1053, 2440
HindIII AAGCTT 3 cut(s) 903, 2188, 2885
HpaII CCGG 1 cut(s) 506
HphI GGTGA 7 cut(s) 353, 886, 940, 1412, 1841, 2023, 2130
Hpy166II GTNNAC 6 cut(s) 921, 1053, 1637, 1911, 2053, 2440
Hpy8I GTNNAC 6 cut(s) 921, 1053, 1637, 1911, 2053, 2440
Hpy99I CGWCG 4 cut(s) 380, 1187, 2186, 2657
HpyAV CCTTC 7 cut(s) 314, 1208, 1664, 1750, 1828, 2525, 3178
HpyCH4III ACNGT 4 cut(s) 882, 1004, 1031, 2571
HpyCH4IV ACGT 3 cut(s) 186, 1111, 1283
HpySE526I ACGT 3 cut(s) 186, 1111, 1283
HspAI GCGC 2 cut(s) 126, 1769
Ksp22I TGATCA 2 cut(s) 2109, 2169
LguI GCTCTTC 1 cut(s) 1804
LmnI GCTCC 3 cut(s) 2240, 2495, 2736
LweI GCATC 5 cut(s) 414, 1571, 1890, 2553, 3222
MaeII ACGT 3 cut(s) 186, 1111, 1283
MfeI CAATTG 1 cut(s) 198
MflI RGATCY 3 cut(s) 940, 1195, 2811
MhlI GDGCHC 7 cut(s) 638, 725, 812, 2342, 2500, 2580, 2741
MlsI TGGCCA 1 cut(s) 2025
MluI ACGCGT 1 cut(s) 1185
MluNI TGGCCA 1 cut(s) 2025
MlyI GAGTC 6 cut(s) 16, 98, 1678, 2413, 2936, 3062
MmeI TCCRAC 2 cut(s) 1530, 2218
Mox20I TGGCCA 1 cut(s) 2025
Mph1103I ATGCAT 1 cut(s) 1483
MroXI GAANNNNTTC 1 cut(s) 1650
MscI TGGCCA 1 cut(s) 2025
MseI TTAA 9 cut(s) 158, 1064, 1190, 1325, 1586, 2097, 2246, 2424, 2987
MslI CAYNNNNRTG 3 cut(s) 1482, 2066, 2549
Msp20I TGGCCA 1 cut(s) 2025
MspA1I CMGCKG 1 cut(s) 1264
MspCI CTTAAG 2 cut(s) 1324, 1585
MspI CCGG 1 cut(s) 506
MspR9I CCNGG 1 cut(s) 1945
MunI CAATTG 1 cut(s) 198
Mva1269I GAATGC 3 cut(s) 128, 820, 3013
MvaI CCWGG 1 cut(s) 1945
MvnI CGCG 1 cut(s) 1187
NdeI CATATG 1 cut(s) 191
NheI GCTAGC 1 cut(s) 818
NlaIV GGNNCC 3 cut(s) 116, 891, 1647
NmuCI GTSAC 4 cut(s) 874, 946, 1418, 2279
NsiI ATGCAT 1 cut(s) 1483
NspI RCATGY 8 cut(s) 1439, 1481, 1485, 2071, 2375, 2471, 2898, 2995
PaeI GCATGC 3 cut(s) 2375, 2471, 2995
PagI TCATGA 1 cut(s) 2221
PciSI GCTCTTC 1 cut(s) 1804
PctI GAATGC 3 cut(s) 128, 820, 3013
PdmI GAANNNNTTC 1 cut(s) 1650
PflFI GACNNNGTC 1 cut(s) 2966
PfoI TCCNGGA 1 cut(s) 1943
PleI GAGTC 6 cut(s) 15, 97, 1678, 2413, 2935, 3061
PpsI GAGTC 6 cut(s) 15, 97, 1678, 2413, 2935, 3061
Ppu21I YACGTR 1 cut(s) 1112
Psp124BI GAGCTC 1 cut(s) 812
Psp6I CCWGG 1 cut(s) 1943
PspFI CCCAGC 1 cut(s) 1250
PspGI CCWGG 1 cut(s) 1943
PspN4I GGNNCC 3 cut(s) 116, 891, 1647
PspPI GGNCC 2 cut(s) 60, 1657
PstNI CAGNNNCTG 2 cut(s) 2416, 2678
PsuI RGATCY 3 cut(s) 940, 1195, 2811
PsyI GACNNNGTC 1 cut(s) 2966
PvuII CAGCTG 1 cut(s) 1264
RsaI GTAC 9 cut(s) 781, 1110, 1226, 1236, 1286, 1706, 2573, 2591, 3015
RsaNI GTAC 9 cut(s) 780, 1109, 1225, 1235, 1285, 1705, 2572, 2590, 3014
RseI CAYNNNNRTG 3 cut(s) 1482, 2066, 2549
SacI GAGCTC 1 cut(s) 812
SapI GCTCTTC 1 cut(s) 1804
SaqAI TTAA 9 cut(s) 158, 1064, 1190, 1325, 1586, 2097, 2246, 2424, 2987
Sau96I GGNCC 2 cut(s) 60, 1657
SchI GAGTC 6 cut(s) 16, 98, 1678, 2413, 2936, 3062
ScrFI CCNGG 1 cut(s) 1945
SduI GDGCHC 7 cut(s) 638, 725, 812, 2342, 2500, 2580, 2741
SfaNI GCATC 5 cut(s) 414, 1571, 1890, 2553, 3222
SinI GGWCC 1 cut(s) 60
SmiMI CAYNNNNRTG 3 cut(s) 1482, 2066, 2549
SmlI CTYRAG 6 cut(s) 261, 1324, 1457, 1585, 2072, 2080
SmoI CTYRAG 6 cut(s) 261, 1324, 1457, 1585, 2072, 2080
SnaBI TACGTA 1 cut(s) 1112
SpeI ACTAGT 1 cut(s) 688
SphI GCATGC 3 cut(s) 2375, 2471, 2995
SsiI CCGC 5 cut(s) 649, 1161, 1530, 1815, 3105
SspI AATATT 1 cut(s) 1798
SstI GAGCTC 1 cut(s) 812
StyD4I CCNGG 1 cut(s) 1943
StyI CCWWGG 3 cut(s) 84, 2732, 2768
TaaI ACNGT 4 cut(s) 882, 1004, 1031, 2571
TaiI ACGT 3 cut(s) 189, 1114, 1286
TaqI TCGA 9 cut(s) 5, 120, 142, 375, 812, 1182, 1899, 2717, 2970
TaqII GACCGA 1 cut(s) 2267
TatI WGTACW 2 cut(s) 1224, 3013
TauI GCSGC 2 cut(s) 651, 1817
Tru1I TTAA 9 cut(s) 158, 1064, 1190, 1325, 1586, 2097, 2246, 2424, 2987
Tru9I TTAA 9 cut(s) 158, 1064, 1190, 1325, 1586, 2097, 2246, 2424, 2987
TscAI CASTG 9 cut(s) 553, 1063, 1338, 2172, 2342, 2439, 2574, 2625, 2763
TseFI GTSAC 4 cut(s) 874, 946, 1418, 2279
Tsp45I GTSAC 4 cut(s) 874, 946, 1418, 2279
TspGWI ACGGA 3 cut(s) 1232, 1371, 2774
TspRI CASTG 9 cut(s) 553, 1063, 1338, 2172, 2342, 2439, 2574, 2625, 2763
Tth111I GACNNNGTC 1 cut(s) 2966
Vha464I CTTAAG 2 cut(s) 1324, 1585
VpaK11BI GGWCC 1 cut(s) 60
XapI RAATTY 4 cut(s) 557, 1591, 2460, 2744
XceI RCATGY 8 cut(s) 1439, 1481, 1485, 2071, 2375, 2471, 2898, 2995
XcmI CCANNNNNNNNNTGG 5 cut(s) 659, 746, 833, 931, 3179
XmaJI CCTAGG 2 cut(s) 2732, 2768
XmiI GTMKAC 1 cut(s) 2052
XmnI GAANNNNTTC 1 cut(s) 1650
Zsp2I ATGCAT 1 cut(s) 1483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.