Rmu_ssc0000006.1_g000011

U-box domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000006.1
OG0012314
Physical Location & Seq
Forward (+)
42480 .. 45906
3427 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000006.1_g000011.1.cds

Sequence Viewer

Length: 2778 bp
atgacctgtgttgttcttggtcttcagctcaaggaatatggaagttcaattgagagtcttgcagagttcatattggcatccatttctgagatcacagtattggtagtgagcgtagtggtggaacaagaaagttttattgaaactgcatgctacctttatcgggcttctatggccataatggagttgatgaccaccgacttcacatgccaagaaaatgccatggaaatttttcagtctatttcaagtagtgttagtttggccaaacttcttgtggagaactgccaaaaaggcattcaaccattttcggatcctgaactcattaccattacagcgcagctggaggaggtcatcaagcacgtaggaaaatgcttgagcttcataccaccatcaacatttggagaccaacattatgcagaaagtgcagttcggtccctttcaaatgagatgcagactgctcactttgaagctcaagcatccaagaccaatgagatagataaaaagatgctgtccttaagaaaacaaccaaaggtagaaccgacatcaacaccaacagaaacggatctctactctataagtttcgagatctccacagaaaatcctcagttcttaaatacgccgcagttgattgaaatgcttaatagcacaagttgggtcagcgaaagaaatgaggagaatatcagtggaccattaacaacattgcctccagttggtcagtacatggagcctatgtatgagactttcttctgtccactgacaaagaagatcatggaggatccagtaaccataagaagtggagtgacctttgagaggaaggcaattgttgagtggtttgagaagctcactggctcagaacaaatattgtgcccaaccactggccagaagttgatgagtaaagctttcaatgagaacatagctctgaaaactacaattgagcagtggaaagaaaggaatgaagcagctaggattaaggttgcccgctcagcgttgtccttggctagttcagatgcaatggtacttgaagcagtaaaagaggtgcaaagtatctaccgaaggaagccatacaacaacactcaagtttgcagtgttggaatattgccattgcttgttcagtgcctagagtacaaagacaaagatgttagaatcacagtcctagagcttttactacaactgatggtggatgacaatgaaagcaaggaaatgattgctgaaaaaatcaacattcctactataattgaaatgctttctagtagtcaccagtccataaggcatgcatcattgctattcttgcttgagctttcaagatcagaagcattatgtgagaaaattggatcagttactggagcaattcttatgttgatcacgattaaatatagacggtcatatgatgcatttgcttcagaaaaagcagacgagaccttaaggaacttagagctttcgccaaacaacatcaaacgcatggcagaaaatggactcatggaacccctcctaaacaatcttactgaaggttgtgaagagatgaaaatagacctggcaagttaccttggggaaattgttcttggacttgacagcaaaacctatgttgctgaaggggcttctcctactcttatcaaaatggtacatagaggaaatacactggccagaggtgcggcattcaaaactctagtgcaactctcctcataccagccaaatgccaacatacttatagaagctggaattgtacaagtcatggttgaagagatgttcatccggaaagttcacaacgaaccaatgaactcaaaaagtgaagcagctgcaatccttgcaaatatatacgagtctggtcttgagcttgagaacctccaggtaaactctcacggtcacaccatgacttcagactatgttgtgtacaacatccttcacatgctcaacaactcaaccccagatgaactaaacaacaatcttatcaggattattttagttcttgctaagatccccaaaccagaggccaccattgtgtcattggtaaaagagactgaagcaagctacaccctcatagaactcatcaacaacccccatgaagaactttccattgcagcaatcaagttactaactgttctttcaccccatatgggccaccttctagccgagagactctgcaaaaccagagttttcacagaactgctcatgaaaacatcaagtgatgaagttcagaggttatcagcaattgggttggagaatctctcttcggagtcaataagcttatcgaaaccaccgcagatcaagagaaaaaagttcatgaagctgttctacctgcctaaatatctatcttttggctattcaaggaggaggagaataccattgtgccctgttcaccgaggagcctgttcctctcaaaacaccttctgtatagttgatgcaaaggcagtggagaagctactagtctgtttggaaaacgagaatccagaggttgttgaagctgcattgtcagctataagcacattgttggatgacaaggtggatgtggacaagtctgtgagtatgttgagtgaggttaacgctgtgcaacatgttttgaatgcagtgaaagggcataggcaagagggattgcggcagaagtcattttgggtgcttgaaaagttcttgaataaaggcagtgatcagtctgcttcagatatatcaaatgacagggtgttgcctgctatattggtcagtgctttccatcatggagctggaaatactaggcagatggctgagaggattttgaggcatttgaataagatgcccaacctctataattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

925

Amino Acids

103.49

Weight (kDa)

5.59

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012314)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68940 AT1G68940 AT1G68940
fragaria_vesca FvH4_4g28940
malus_domestica MD13G1055000.v1.1
prunus_persica Prupe.1G295900_v2.0.a1 Prupe.1G295900_v2.0.a1 Prupe.1G295900_v2.0.a1
pyrus_communis pycom16g04680
rosa_chinensis RchiOBHm_Chr4g0437081
rosa_laevigata RLG00000006470
rosa_multiflora Rmu_ssc0000006.1_g000011
rosa_roxburghii Rroxscaffold_5G00378160
rosa_rugosa Rorug04G0298000
rosa_samantha Rh4AG352700 Rh4BG362000 Rh4CG376300 Rh4DG356200
rosa_wichuraiana Rw4G030880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2298
AccB7I CCANNNNNTGG 1 cut(s) 872
AccBSI CCGCTC 1 cut(s) 978
AccIII TCCGGA 1 cut(s) 1746
AciI CCGC 5 cut(s) 617, 976, 1646, 2252, 2587
AclWI GGATC 7 cut(s) 302, 315, 567, 767, 780, 1336, 1963
AcoI YGGCCR 4 cut(s) 171, 258, 874, 1635
AcsI RAATTY 1 cut(s) 225
AcuI CTGAAG 7 cut(s) 8, 1380, 1521, 1605, 1854, 2034, 2631
AfaI GTAC 6 cut(s) 716, 1014, 1121, 1617, 1719, 1886
AfiI CCNNNNNNNGG 5 cut(s) 160, 707, 807, 872, 2108
AflII CTTAAG 2 cut(s) 511, 1417
AflIII ACRYGT 1 cut(s) 2545
AhlI ACTAGT 1 cut(s) 2416
AjnI CCWGG 2 cut(s) 1527, 1839
AjuI GAANNNNNNNTTGG 4 cut(s) 276, 308, 1539, 1571
AleI CACNNNNGTG 1 cut(s) 1991
Alw26I GTCTC 5 cut(s) 393, 728, 1406, 2003, 2122
AlwI GGATC 7 cut(s) 302, 315, 567, 767, 780, 1336, 1963
AlwNI CAGNNNCTG 1 cut(s) 1337
Aor13HI TCCGGA 1 cut(s) 1746
AoxI GGCC 6 cut(s) 171, 258, 874, 1635, 1983, 2110
ApeKI GCWGC 6 cut(s) 334, 956, 1787, 1790, 2072, 2456
ApoI RAATTY 1 cut(s) 225
Asp700I GAANNNNTTC 3 cut(s) 228, 1551, 2282
AspLEI GCGC 1 cut(s) 334
AspS9I GGNCC 3 cut(s) 429, 683, 2110
AsuHPI GGTGA 3 cut(s) 1244, 2091, 2342
AvaII GGWCC 2 cut(s) 429, 683
BaeGI GKGCMC 2 cut(s) 866, 2345
BalI TGGCCA 4 cut(s) 173, 260, 876, 1637
BamHI GGATCC 2 cut(s) 307, 772
BarI GAAGNNNNNNTAC 2 cut(s) 2270, 2302
BbsI GAAGAC 1 cut(s) 14
BbvI GCAGC 6 cut(s) 346, 968, 1777, 1799, 2084, 2443
BccI CCATC 4 cut(s) 394, 1165, 2706, 2719
BciT130I CCWGG 2 cut(s) 1529, 1841
BclI TGATCA 2 cut(s) 1356, 2635
BcoDI GTCTC 5 cut(s) 393, 728, 1406, 2003, 2122
BcuI ACTAGT 1 cut(s) 2416
BfaI CTAG 9 cut(s) 960, 996, 1115, 1151, 1245, 1661, 2120, 2417, 2718
BfrI CTTAAG 2 cut(s) 511, 1417
BfuAI ACCTGC 1 cut(s) 2298
BglI GCCNNNNNGGC 1 cut(s) 288
BglII AGATCT 1 cut(s) 582
BisI GCNGC 9 cut(s) 335, 617, 957, 1647, 1788, 1791, 2073, 2457, 2588
BlpI GCTNAGC 1 cut(s) 979
BlsI GCNGC 9 cut(s) 336, 618, 958, 1648, 1789, 1792, 2074, 2458, 2589
Bme1390I CCNGG 2 cut(s) 1529, 1841
Bme18I GGWCC 2 cut(s) 429, 683
BmgT120I GGNCC 3 cut(s) 429, 683, 2110
BmiI GGNNCC 6 cut(s) 309, 431, 723, 774, 1479, 2359
BmrFI CCNGG 2 cut(s) 1529, 1841
BmsI GCATC 9 cut(s) 86, 435, 482, 492, 994, 1280, 1375, 2383, 2748
BpiI GAAGAC 1 cut(s) 14
BplI GAGNNNNNCTC 2 cut(s) 2204, 2236
BpmI CTGGAG 4 cut(s) 359, 687, 1359, 1823
Bpu1102I GCTNAGC 1 cut(s) 979
BpuEI CTTGAG 7 cut(s) 14, 391, 453, 1056, 1310, 1844, 1850
BsaAI YACGTR 1 cut(s) 358
BsaBI GATNNNNATC 1 cut(s) 1742
BsaI GGTCTC 2 cut(s) 393, 1406
BsaJI CCNNGG 4 cut(s) 219, 990, 1540, 2353
BsaWI WCCGGW 1 cut(s) 1746
BsaXI ACNNNNNCTCC 4 cut(s) 685, 713, 715, 743
Bsc4I CCNNNNNNNGG 5 cut(s) 160, 707, 807, 872, 2108
Bse1I ACTGG 7 cut(s) 704, 776, 847, 877, 1255, 1342, 1638
Bse3DI GCAATG 5 cut(s) 695, 1014, 1097, 1274, 2067
Bse8I GATNNNNATC 1 cut(s) 1742
BseAI TCCGGA 1 cut(s) 1746
BseBI CCWGG 2 cut(s) 1529, 1841
BseDI CCNNGG 4 cut(s) 219, 990, 1540, 2353
BseGI GGATG 7 cut(s) 77, 473, 1183, 1743, 1890, 2491, 2503
BseJI GATNNNNATC 1 cut(s) 1742
BseLI CCNNNNNNNGG 5 cut(s) 160, 707, 807, 872, 2108
BseMI GCAATG 5 cut(s) 695, 1014, 1097, 1274, 2067
BseMII CTCAG 5 cut(s) 78, 614, 861, 993, 2721
BseNI ACTGG 7 cut(s) 704, 776, 847, 877, 1255, 1342, 1638
BseRI GAGGAG 6 cut(s) 356, 683, 1663, 2338, 2341, 2370
BseSI GKGCMC 2 cut(s) 866, 2345
BseXI GCAGC 6 cut(s) 346, 968, 1777, 1799, 2084, 2443
BsgI GTGCAG 1 cut(s) 441
BshFI GGCC 6 cut(s) 173, 260, 876, 1637, 1985, 2112
BsiSI CCGG 1 cut(s) 1747
BslFI GGGAC 1 cut(s) 415
BslI CCNNNNNNNGG 5 cut(s) 160, 707, 807, 872, 2108
BsmAI GTCTC 5 cut(s) 393, 728, 1406, 2003, 2122
BsmFI GGGAC 1 cut(s) 415
BsmI GAATGC 3 cut(s) 291, 1649, 2560
BsnI GGCC 6 cut(s) 173, 260, 876, 1637, 1985, 2112
Bso31I GGTCTC 2 cut(s) 393, 1406
Bsp1286I GDGCHC 2 cut(s) 866, 2345
Bsp13I TCCGGA 1 cut(s) 1746
Bsp1407I TGTACA 2 cut(s) 1717, 1884
Bsp1720I GCTNAGC 1 cut(s) 979
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 5 cut(s) 617, 976, 1646, 2252, 2587
BspANI GGCC 6 cut(s) 173, 260, 876, 1637, 1985, 2112
BspCNI CTCAG 5 cut(s) 79, 613, 860, 992, 2722
BspEI TCCGGA 1 cut(s) 1746
BspHI TCATGA 2 cut(s) 2163, 2274
BspLI GGNNCC 6 cut(s) 309, 431, 723, 774, 1479, 2359
BspMI ACCTGC 1 cut(s) 2298
BspPI GGATC 7 cut(s) 302, 315, 567, 767, 780, 1336, 1963
BspTI CTTAAG 2 cut(s) 511, 1417
BspTNI GGTCTC 2 cut(s) 393, 1406
BsrBI CCGCTC 1 cut(s) 978
BsrDI GCAATG 5 cut(s) 695, 1014, 1097, 1274, 2067
BsrGI TGTACA 2 cut(s) 1717, 1884
BsrI ACTGG 7 cut(s) 704, 776, 847, 877, 1255, 1342, 1638
BssECI CCNNGG 4 cut(s) 219, 990, 1540, 2353
BssT1I CCWWGG 3 cut(s) 219, 990, 1540
Bst2UI CCWGG 2 cut(s) 1529, 1841
Bst4CI ACNGT 5 cut(s) 97, 1147, 1377, 1856, 2092
Bst6I CTCTTC 3 cut(s) 1506, 1728, 2227
BstAFI CTTAAG 2 cut(s) 511, 1417
BstAPI GCANNNNNTGC 2 cut(s) 419, 1799
BstAUI TGTACA 2 cut(s) 1717, 1884
BstBAI YACGTR 1 cut(s) 358
BstC8I GCNNGC 5 cut(s) 148, 976, 1269, 2020, 2676
BstDEI CTNAG 7 cut(s) 87, 600, 847, 979, 1426, 1965, 2730
BstDSI CCRYGG 1 cut(s) 219
BstENI CCTNNNNNAGG 1 cut(s) 805
BstF5I GGATG 7 cut(s) 77, 473, 1183, 1743, 1890, 2491, 2503
BstHHI GCGC 1 cut(s) 334
BstMAI GTCTC 5 cut(s) 393, 728, 1406, 2003, 2122
BstMWI GCNNNNNNNGC 9 cut(s) 170, 288, 419, 980, 1285, 1589, 1643, 1799, 2465
BstNI CCWGG 2 cut(s) 1529, 1841
BstNSI RCATGY 5 cut(s) 150, 207, 1271, 1903, 2549
BstSCI CCNGG 2 cut(s) 1527, 1839
BstSLI GKGCMC 2 cut(s) 866, 2345
BstV1I GCAGC 6 cut(s) 346, 968, 1777, 1799, 2084, 2443
BstV2I GAAGAC 1 cut(s) 14
BstX2I RGATCY 5 cut(s) 307, 559, 582, 772, 1968
BstYI RGATCY 5 cut(s) 307, 559, 582, 772, 1968
BsuRI GGCC 6 cut(s) 173, 260, 876, 1637, 1985, 2112
BtgI CCRYGG 1 cut(s) 219
BtsCI GGATG 7 cut(s) 77, 473, 1183, 1743, 1890, 2491, 2503
BtsI GCAGTG 5 cut(s) 941, 1087, 2409, 2565, 2638
BveI ACCTGC 1 cut(s) 2298
Cac8I GCNNGC 5 cut(s) 148, 976, 1269, 2020, 2676
CaiI CAGNNNCTG 1 cut(s) 1337
CciI TCATGA 2 cut(s) 2163, 2274
CfoI GCGC 1 cut(s) 334
Cfr13I GGNCC 3 cut(s) 429, 683, 2110
Csp6I GTAC 6 cut(s) 715, 1013, 1120, 1616, 1718, 1885
CspCI CAANNNNNGTGG 2 cut(s) 2385, 2420
CviQI GTAC 6 cut(s) 715, 1013, 1120, 1616, 1718, 1885
DdeI CTNAG 7 cut(s) 87, 600, 847, 979, 1426, 1965, 2730
EaeI YGGCCR 4 cut(s) 171, 258, 874, 1635
Eam1104I CTCTTC 3 cut(s) 1506, 1728, 2227
EarI CTCTTC 3 cut(s) 1506, 1728, 2227
Eco130I CCWWGG 3 cut(s) 219, 990, 1540
Eco31I GGTCTC 2 cut(s) 393, 1406
Eco47I GGWCC 2 cut(s) 429, 683
Eco57I CTGAAG 7 cut(s) 8, 1380, 1521, 1605, 1854, 2034, 2631
EcoNI CCTNNNNNAGG 1 cut(s) 805
EcoRII CCWGG 2 cut(s) 1527, 1839
EcoT14I CCWWGG 3 cut(s) 219, 990, 1540
EcoT22I ATGCAT 2 cut(s) 1273, 1390
ErhI CCWWGG 3 cut(s) 219, 990, 1540
FaqI GGGAC 1 cut(s) 415
FauI CCCGC 1 cut(s) 983
FauNDI CATATG 2 cut(s) 1381, 2106
FbaI TGATCA 2 cut(s) 1356, 2635
Fnu4HI GCNGC 9 cut(s) 335, 617, 957, 1647, 1788, 1791, 2073, 2457, 2588
FokI GGATG 7 cut(s) 64, 460, 1190, 1730, 1877, 2498, 2510
Fsp4HI GCNGC 9 cut(s) 335, 617, 957, 1647, 1788, 1791, 2073, 2457, 2588
FspBI CTAG 9 cut(s) 960, 996, 1115, 1151, 1245, 1661, 2120, 2417, 2718
GlaI GCGC 1 cut(s) 333
GluI GCNGC 9 cut(s) 335, 617, 957, 1647, 1788, 1791, 2073, 2457, 2588
GsuI CTGGAG 4 cut(s) 359, 687, 1359, 1823
HaeIII GGCC 6 cut(s) 173, 260, 876, 1637, 1985, 2112
HapII CCGG 1 cut(s) 1747
HhaI GCGC 1 cut(s) 334
Hin6I GCGC 1 cut(s) 332
HinP1I GCGC 1 cut(s) 332
HincII GTYRAC 1 cut(s) 2533
HindII GTYRAC 1 cut(s) 2533
HindIII AAGCTT 2 cut(s) 894, 2236
HinfI GANTC 8 cut(s) 55, 1140, 1470, 1814, 2130, 2215, 2228, 2437
HpaI GTTAAC 1 cut(s) 2533
HpaII CCGG 1 cut(s) 1747
HphI GGTGA 3 cut(s) 1244, 2091, 2342
Hpy166II GTNNAC 8 cut(s) 683, 749, 1756, 1846, 1885, 2350, 2503, 2533
Hpy8I GTNNAC 8 cut(s) 683, 749, 1756, 1846, 1885, 2350, 2503, 2533
HpyAV CCTTC 7 cut(s) 805, 1044, 1496, 1580, 1904, 2126, 2389
HpyCH4III ACNGT 5 cut(s) 97, 1147, 1377, 1856, 2092
HpyCH4IV ACGT 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 9 cut(s) 170, 288, 419, 980, 1285, 1589, 1643, 1799, 2465
HpyF3I CTNAG 7 cut(s) 87, 600, 847, 979, 1426, 1965, 2730
HpySE526I ACGT 1 cut(s) 357
HspAI GCGC 1 cut(s) 332
Kpn2I TCCGGA 1 cut(s) 1746
Ksp22I TGATCA 2 cut(s) 1356, 2635
KspAI GTTAAC 1 cut(s) 2533
LmnI GCTCC 4 cut(s) 721, 1340, 2357, 2705
Lsp1109I GCAGC 6 cut(s) 346, 968, 1777, 1799, 2084, 2443
LweI GCATC 9 cut(s) 86, 435, 482, 492, 994, 1280, 1375, 2383, 2748
MaeI CTAG 9 cut(s) 960, 996, 1115, 1151, 1245, 1661, 2120, 2417, 2718
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 7 cut(s) 778, 796, 1250, 1333, 1535, 1856, 2082
MbiI CCGCTC 1 cut(s) 978
MboII GAAGA 7 cut(s) 14, 733, 772, 1523, 1745, 2069, 2214
MfeI CAATTG 4 cut(s) 48, 816, 927, 2202
MflI RGATCY 5 cut(s) 307, 559, 582, 772, 1968
MhlI GDGCHC 2 cut(s) 866, 2345
MlsI TGGCCA 4 cut(s) 173, 260, 876, 1637
MluNI TGGCCA 4 cut(s) 173, 260, 876, 1637
MlyI GAGTC 5 cut(s) 64, 1464, 1823, 2124, 2237
MmeI TCCRAC 3 cut(s) 1066, 2190, 2463
Mox20I TGGCCA 4 cut(s) 173, 260, 876, 1637
Mph1103I ATGCAT 2 cut(s) 1273, 1390
MroI TCCGGA 1 cut(s) 1746
MroXI GAANNNNTTC 3 cut(s) 228, 1551, 2282
MscI TGGCCA 4 cut(s) 173, 260, 876, 1637
MseI TTAA 9 cut(s) 512, 608, 636, 689, 966, 1365, 1418, 2532, 2776
MslI CAYNNNNRTG 1 cut(s) 1991
Msp20I TGGCCA 4 cut(s) 173, 260, 876, 1637
MspA1I CMGCKG 2 cut(s) 337, 1790
MspCI CTTAAG 2 cut(s) 511, 1417
MspI CCGG 1 cut(s) 1747
MspR9I CCNGG 2 cut(s) 1529, 1841
MunI CAATTG 4 cut(s) 48, 816, 927, 2202
Mva1269I GAATGC 3 cut(s) 291, 1649, 2560
MvaI CCWGG 2 cut(s) 1529, 1841
MwoI GCNNNNNNNGC 9 cut(s) 170, 288, 419, 980, 1285, 1589, 1643, 1799, 2465
NcoI CCATGG 1 cut(s) 219
NdeI CATATG 2 cut(s) 1381, 2106
NlaIV GGNNCC 6 cut(s) 309, 431, 723, 774, 1479, 2359
NmeAIII GCCGAG 1 cut(s) 2149
NmuCI GTSAC 3 cut(s) 796, 1250, 1856
NsiI ATGCAT 2 cut(s) 1273, 1390
NspI RCATGY 5 cut(s) 150, 207, 1271, 1903, 2549
OliI CACNNNNGTG 1 cut(s) 1991
PaeI GCATGC 2 cut(s) 150, 1271
PagI TCATGA 2 cut(s) 2163, 2274
PciI ACATGT 1 cut(s) 2545
PctI GAATGC 3 cut(s) 291, 1649, 2560
PdmI GAANNNNTTC 3 cut(s) 228, 1551, 2282
PfeI GAWTC 3 cut(s) 1140, 2215, 2437
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 9 cut(s) 336, 618, 958, 1648, 1789, 1792, 2074, 2458, 2589
PleI GAGTC 5 cut(s) 63, 1464, 1822, 2124, 2236
PpsI GAGTC 5 cut(s) 63, 1464, 1822, 2124, 2236
Ppu21I YACGTR 1 cut(s) 358
PscI ACATGT 1 cut(s) 2545
Psp6I CCWGG 2 cut(s) 1527, 1839
PspGI CCWGG 2 cut(s) 1527, 1839
PspN4I GGNNCC 6 cut(s) 309, 431, 723, 774, 1479, 2359
PspPI GGNCC 3 cut(s) 429, 683, 2110
PstNI CAGNNNCTG 1 cut(s) 1337
PsuI RGATCY 5 cut(s) 307, 559, 582, 772, 1968
PvuII CAGCTG 2 cut(s) 337, 1790
RsaI GTAC 6 cut(s) 716, 1014, 1121, 1617, 1719, 1886
RsaNI GTAC 6 cut(s) 715, 1013, 1120, 1616, 1718, 1885
RseI CAYNNNNRTG 1 cut(s) 1991
SaqAI TTAA 9 cut(s) 512, 608, 636, 689, 966, 1365, 1418, 2532, 2776
SatI GCNGC 9 cut(s) 335, 617, 957, 1647, 1788, 1791, 2073, 2457, 2588
Sau96I GGNCC 3 cut(s) 429, 683, 2110
SchI GAGTC 5 cut(s) 64, 1464, 1823, 2124, 2237
ScrFI CCNGG 2 cut(s) 1529, 1841
SduI GDGCHC 2 cut(s) 866, 2345
SfaNI GCATC 9 cut(s) 86, 435, 482, 492, 994, 1280, 1375, 2383, 2748
SinI GGWCC 2 cut(s) 429, 683
SmiMI CAYNNNNRTG 1 cut(s) 1991
SmlI CTYRAG 9 cut(s) 29, 370, 468, 511, 1071, 1289, 1417, 1823, 1829
SmoI CTYRAG 9 cut(s) 29, 370, 468, 511, 1071, 1289, 1417, 1823, 1829
SpeI ACTAGT 1 cut(s) 2416
SphI GCATGC 2 cut(s) 150, 1271
SsiI CCGC 5 cut(s) 617, 976, 1646, 2252, 2587
SspI AATATT 2 cut(s) 858, 1092
SspMI CTAG 9 cut(s) 960, 996, 1115, 1151, 1245, 1661, 2120, 2417, 2718
StyD4I CCNGG 2 cut(s) 1527, 1839
StyI CCWWGG 3 cut(s) 219, 990, 1540
TaaI ACNGT 5 cut(s) 97, 1147, 1377, 1856, 2092
TaiI ACGT 1 cut(s) 360
TaqI TCGA 2 cut(s) 579, 2243
TaqII GACCGA 1 cut(s) 417
TatI WGTACW 4 cut(s) 714, 1119, 1717, 1884
TauI GCSGC 3 cut(s) 619, 1649, 2590
TfiI GAWTC 3 cut(s) 1140, 2215, 2437
Tru1I TTAA 9 cut(s) 512, 608, 636, 689, 966, 1365, 1418, 2532, 2776
Tru9I TTAA 9 cut(s) 512, 608, 636, 689, 966, 1365, 1418, 2532, 2776
TseFI GTSAC 3 cut(s) 796, 1250, 1856
TseI GCWGC 6 cut(s) 334, 956, 1787, 1790, 2072, 2456
Tsp45I GTSAC 3 cut(s) 796, 1250, 1856
TspGWI ACGGA 1 cut(s) 572
Van91I CCANNNNNTGG 1 cut(s) 872
Vha464I CTTAAG 2 cut(s) 511, 1417
VpaK11BI GGWCC 2 cut(s) 429, 683
XagI CCTNNNNNAGG 1 cut(s) 805
XapI RAATTY 1 cut(s) 225
XceI RCATGY 5 cut(s) 150, 207, 1271, 1903, 2549
XcmI CCANNNNNNNNNTGG 3 cut(s) 268, 1996, 2705
XmnI GAANNNNTTC 3 cut(s) 228, 1551, 2282
XspI CTAG 9 cut(s) 960, 996, 1115, 1151, 1245, 1661, 2120, 2417, 2718
Zsp2I ATGCAT 2 cut(s) 1273, 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.