U-box domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G68940 AT1G68940 AT1G68940 |
| fragaria_vesca | FvH4_4g28940 |
| malus_domestica | MD13G1055000.v1.1 |
| prunus_persica | Prupe.1G295900_v2.0.a1 Prupe.1G295900_v2.0.a1 Prupe.1G295900_v2.0.a1 |
| pyrus_communis | pycom16g04680 |
| rosa_chinensis | RchiOBHm_Chr4g0437081 |
| rosa_laevigata | RLG00000006470 |
| rosa_multiflora | Rmu_ssc0000006.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00378160 |
| rosa_rugosa | Rorug04G0298000 |
| rosa_samantha | Rh4AG352700 Rh4BG362000 Rh4CG376300 Rh4DG356200 |
| rosa_wichuraiana | Rw4G030880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 230 |
| Acc16I | TGCGCA | 1 cut(s) | 1221 |
| Acc36I | ACCTGC | 3 cut(s) | 230, 2346, 2610 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 887 |
| AccII | CGCG | 2 cut(s) | 991, 2090 |
| AciI | CCGC | 3 cut(s) | 401, 445, 2088 |
| AclWI | GGATC | 5 cut(s) | 320, 706, 1351, 1978, 2181 |
| AcoI | YGGCCR | 2 cut(s) | 192, 276 |
| AcuI | CTGAAG | 6 cut(s) | 233, 1395, 1536, 1869, 2049, 2943 |
| AfaI | GTAC | 6 cut(s) | 731, 1029, 1136, 1632, 1913, 2288 |
| AfeI | AGCGCT | 1 cut(s) | 2368 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 181, 722, 822, 887, 2123, 2663 |
| AflII | CTTAAG | 1 cut(s) | 1432 |
| AflIII | ACRYGT | 1 cut(s) | 2857 |
| AjiI | CACGTC | 1 cut(s) | 1048 |
| AjnI | CCWGG | 2 cut(s) | 1854, 3029 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1554, 1586, 2600, 2632 |
| Alw21I | GWGCWC | 2 cut(s) | 51, 2883 |
| Alw26I | GTCTC | 4 cut(s) | 411, 491, 743, 2014 |
| AlwI | GGATC | 5 cut(s) | 320, 706, 1351, 1978, 2181 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 329, 1129, 1352 |
| Aor51HI | AGCGCT | 1 cut(s) | 2368 |
| AoxI | GGCC | 3 cut(s) | 192, 276, 1605 |
| ApeKI | GCWGC | 5 cut(s) | 971, 995, 1661, 1997, 2768 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 509, 541 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 246, 1566, 2594 |
| AspLEI | GCGC | 3 cut(s) | 991, 1222, 2369 |
| AspS9I | GGNCC | 1 cut(s) | 1605 |
| AsuC2I | CCSGG | 1 cut(s) | 791 |
| AsuHPI | GGTGA | 7 cut(s) | 737, 1259, 2106, 2200, 2884, 2929, 3010 |
| AsuII | TTCGAA | 2 cut(s) | 1762, 2361 |
| AsuNHI | GCTAGC | 1 cut(s) | 2134 |
| AxyI | CCTNAGG | 1 cut(s) | 2169 |
| BaeGI | GKGCMC | 1 cut(s) | 2657 |
| BalI | TGGCCA | 2 cut(s) | 194, 278 |
| BanII | GRGCYC | 1 cut(s) | 2189 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2582, 2614 |
| Bbv12I | GWGCWC | 2 cut(s) | 51, 2883 |
| BbvCI | CCTCAGC | 2 cut(s) | 615, 633 |
| BbvI | GCAGC | 5 cut(s) | 983, 1007, 1673, 2009, 2755 |
| BccI | CCATC | 5 cut(s) | 1531, 2213, 2262, 2500, 3031 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 429, 463 |
| BciT130I | CCWGG | 2 cut(s) | 1856, 3031 |
| BclI | TGATCA | 1 cut(s) | 1371 |
| BcnI | CCSGG | 1 cut(s) | 791 |
| BcoDI | GTCTC | 4 cut(s) | 411, 491, 743, 2014 |
| BfaI | CTAG | 9 cut(s) | 1011, 1260, 1676, 2135, 2240, 2276, 2312, 2384, 2396 |
| BfmI | CTRYAG | 2 cut(s) | 585, 2544 |
| BfoI | RGCGCY | 1 cut(s) | 2370 |
| BfrI | CTTAAG | 1 cut(s) | 1432 |
| BfuAI | ACCTGC | 3 cut(s) | 230, 2346, 2610 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 306 |
| BglII | AGATCT | 2 cut(s) | 283, 574 |
| BisI | GCNGC | 6 cut(s) | 972, 996, 1662, 1998, 2088, 2769 |
| BlsI | GCNGC | 6 cut(s) | 973, 997, 1663, 1999, 2089, 2770 |
| Bme1390I | CCNGG | 3 cut(s) | 791, 1856, 3031 |
| BmgBI | CACGTC | 1 cut(s) | 1048 |
| BmgT120I | GGNCC | 1 cut(s) | 1605 |
| BmiI | GGNNCC | 3 cut(s) | 738, 1070, 1494 |
| BmrFI | CCNGG | 3 cut(s) | 791, 1856, 3031 |
| BmtI | GCTAGC | 1 cut(s) | 2138 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1592, 1624, 1594, 1626 |
| BpmI | CTGGAG | 4 cut(s) | 377, 1151, 1374, 1838 |
| Bpu10I | CCTNAGC | 3 cut(s) | 389, 615, 633 |
| Bpu14I | TTCGAA | 2 cut(s) | 1762, 2361 |
| BpuEI | CTTGAG | 3 cut(s) | 35, 1865, 1904 |
| BpuMI | CCSGG | 1 cut(s) | 791 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1321 |
| BsaI | GGTCTC | 2 cut(s) | 411, 491 |
| BsaJI | CCNNGG | 4 cut(s) | 528, 603, 1005, 1555 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 679, 709, 728, 758 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 181, 722, 822, 887, 2123, 2663 |
| Bse1I | ACTGG | 7 cut(s) | 68, 892, 1188, 1270, 1357, 2019, 3000 |
| Bse21I | CCTNAGG | 1 cut(s) | 2169 |
| Bse3DI | GCAATG | 5 cut(s) | 243, 1112, 1289, 2082, 2134 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1321 |
| BseBI | CCWGG | 2 cut(s) | 1856, 3031 |
| BseDI | CCNNGG | 4 cut(s) | 528, 603, 1005, 1555 |
| BseGI | GGATG | 5 cut(s) | 98, 309, 790, 1198, 2803 |
| BseJI | GATNNNNATC | 1 cut(s) | 1321 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 181, 722, 822, 887, 2123, 2663 |
| BseMI | GCAATG | 5 cut(s) | 243, 1112, 1289, 2082, 2134 |
| BseNI | ACTGG | 7 cut(s) | 68, 892, 1188, 1270, 1357, 2019, 3000 |
| BseRI | GAGGAG | 3 cut(s) | 374, 962, 2650 |
| BseSI | GKGCMC | 1 cut(s) | 2657 |
| BseXI | GCAGC | 5 cut(s) | 983, 1007, 1673, 2009, 2755 |
| BseYI | CCCAGC | 1 cut(s) | 1832 |
| BsgI | GTGCAG | 3 cut(s) | 1014, 1179, 2016 |
| Bsh1236I | CGCG | 2 cut(s) | 991, 2090 |
| Bsh1285I | CGRYCG | 1 cut(s) | 449 |
| BshFI | GGCC | 3 cut(s) | 194, 278, 1607 |
| BsiEI | CGRYCG | 1 cut(s) | 449 |
| BsiHKAI | GWGCWC | 2 cut(s) | 51, 2883 |
| BsiSI | CCGG | 1 cut(s) | 791 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 181, 722, 822, 887, 2123, 2663 |
| BsmAI | GTCTC | 4 cut(s) | 411, 491, 743, 2014 |
| BsmI | GAATGC | 6 cut(s) | 389, 475, 1447, 1664, 2391, 2755 |
| BsnI | GGCC | 3 cut(s) | 194, 278, 1607 |
| Bso31I | GGTCTC | 2 cut(s) | 411, 491 |
| Bsp119I | TTCGAA | 2 cut(s) | 1762, 2361 |
| Bsp1286I | GDGCHC | 4 cut(s) | 51, 2189, 2657, 2883 |
| Bsp1407I | TGTACA | 2 cut(s) | 1911, 2286 |
| Bsp19I | CCATGG | 1 cut(s) | 603 |
| BspACI | CCGC | 3 cut(s) | 401, 445, 2088 |
| BspANI | GGCC | 3 cut(s) | 194, 278, 1607 |
| BspFNI | CGCG | 2 cut(s) | 991, 2090 |
| BspLI | GGNNCC | 3 cut(s) | 738, 1070, 1494 |
| BspMI | ACCTGC | 3 cut(s) | 230, 2346, 2610 |
| BspOI | GCTAGC | 1 cut(s) | 2138 |
| BspPI | GGATC | 5 cut(s) | 320, 706, 1351, 1978, 2181 |
| BspQI | GCTCTTC | 2 cut(s) | 528, 2286 |
| BspT104I | TTCGAA | 2 cut(s) | 1762, 2361 |
| BspTI | CTTAAG | 1 cut(s) | 1432 |
| BspTNI | GGTCTC | 2 cut(s) | 411, 491 |
| BsrDI | GCAATG | 5 cut(s) | 243, 1112, 1289, 2082, 2134 |
| BsrGI | TGTACA | 2 cut(s) | 1911, 2286 |
| BsrI | ACTGG | 7 cut(s) | 68, 892, 1188, 1270, 1357, 2019, 3000 |
| BssECI | CCNNGG | 4 cut(s) | 528, 603, 1005, 1555 |
| BssT1I | CCWWGG | 4 cut(s) | 528, 603, 1005, 1555 |
| Bst2UI | CCWGG | 2 cut(s) | 1856, 3031 |
| Bst4CI | ACNGT | 7 cut(s) | 1079, 1392, 1871, 2107, 2299, 2436, 2652 |
| Bst6I | CTCTTC | 6 cut(s) | 528, 1521, 1743, 2286, 2813, 2883 |
| BstAFI | CTTAAG | 1 cut(s) | 1432 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 437, 1814 |
| BstAUI | TGTACA | 2 cut(s) | 1911, 2286 |
| BstBI | TTCGAA | 2 cut(s) | 1762, 2361 |
| BstC8I | GCNNGC | 8 cut(s) | 169, 993, 1284, 2035, 2136, 2220, 2831, 2988 |
| BstDSI | CCRYGG | 1 cut(s) | 603 |
| BstEII | GGTNACC | 1 cut(s) | 793 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 820 |
| BstF5I | GGATG | 5 cut(s) | 98, 309, 790, 1198, 2803 |
| BstFNI | CGCG | 2 cut(s) | 991, 2090 |
| BstH2I | RGCGCY | 1 cut(s) | 2370 |
| BstHHI | GCGC | 3 cut(s) | 991, 1222, 2369 |
| BstMAI | GTCTC | 4 cut(s) | 411, 491, 743, 2014 |
| BstMCI | CGRYCG | 1 cut(s) | 449 |
| BstNI | CCWGG | 2 cut(s) | 1856, 3031 |
| BstNSI | RCATGY | 4 cut(s) | 1286, 1918, 2833, 2861 |
| BstPI | GGTNACC | 1 cut(s) | 793 |
| BstSCI | CCNGG | 3 cut(s) | 789, 1854, 3029 |
| BstSFI | CTRYAG | 2 cut(s) | 585, 2544 |
| BstSLI | GKGCMC | 1 cut(s) | 2657 |
| BstUI | CGCG | 2 cut(s) | 991, 2090 |
| BstV1I | GCAGC | 5 cut(s) | 983, 1007, 1673, 2009, 2755 |
| BstX2I | RGATCY | 5 cut(s) | 283, 325, 574, 1983, 2173 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1703, 3037 |
| BstYI | RGATCY | 5 cut(s) | 283, 325, 574, 1983, 2173 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2169 |
| BsuRI | GGCC | 3 cut(s) | 194, 278, 1607 |
| BtgI | CCRYGG | 1 cut(s) | 603 |
| BtrI | CACGTC | 1 cut(s) | 1048 |
| BtsCI | GGATG | 5 cut(s) | 98, 309, 790, 1198, 2803 |
| BtsI | GCAGTG | 2 cut(s) | 447, 1167 |
| BtsIMutI | CAGTG | 9 cut(s) | 447, 764, 885, 1130, 1167, 1350, 2012, 2304, 2648 |
| BveI | ACCTGC | 3 cut(s) | 230, 2346, 2610 |
| Cac8I | GCNNGC | 8 cut(s) | 169, 993, 1284, 2035, 2136, 2220, 2831, 2988 |
| CaiI | CAGNNNCTG | 3 cut(s) | 329, 1129, 1352 |
| CfoI | GCGC | 3 cut(s) | 991, 1222, 2369 |
| Cfr13I | GGNCC | 1 cut(s) | 1605 |
| CseI | GACGC | 1 cut(s) | 2275 |
| Csp6I | GTAC | 6 cut(s) | 730, 1028, 1135, 1631, 1912, 2287 |
| CviQI | GTAC | 6 cut(s) | 730, 1028, 1135, 1631, 1912, 2287 |
| EaeI | YGGCCR | 2 cut(s) | 192, 276 |
| Eam1104I | CTCTTC | 6 cut(s) | 528, 1521, 1743, 2286, 2813, 2883 |
| EarI | CTCTTC | 6 cut(s) | 528, 1521, 1743, 2286, 2813, 2883 |
| Eco130I | CCWWGG | 4 cut(s) | 528, 603, 1005, 1555 |
| Eco24I | GRGCYC | 1 cut(s) | 2189 |
| Eco31I | GGTCTC | 2 cut(s) | 411, 491 |
| Eco47III | AGCGCT | 1 cut(s) | 2368 |
| Eco57I | CTGAAG | 6 cut(s) | 233, 1395, 1536, 1869, 2049, 2943 |
| Eco81I | CCTNAGG | 1 cut(s) | 2169 |
| Eco91I | GGTNACC | 1 cut(s) | 793 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 820 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1605 |
| EcoO65I | GGTNACC | 1 cut(s) | 793 |
| EcoRI | GAATTC | 3 cut(s) | 1786, 1962, 2051 |
| EcoRII | CCWGG | 2 cut(s) | 1854, 3029 |
| EcoT14I | CCWWGG | 4 cut(s) | 528, 603, 1005, 1555 |
| EcoT22I | ATGCAT | 1 cut(s) | 1288 |
| EcoT38I | GRGCYC | 1 cut(s) | 2189 |
| ErhI | CCWWGG | 4 cut(s) | 528, 603, 1005, 1555 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1057, 1089 |
| FbaI | TGATCA | 1 cut(s) | 1371 |
| Fnu4HI | GCNGC | 6 cut(s) | 972, 996, 1662, 1998, 2088, 2769 |
| FokI | GGATG | 5 cut(s) | 85, 296, 797, 1205, 2810 |
| FriOI | GRGCYC | 1 cut(s) | 2189 |
| Fsp4HI | GCNGC | 6 cut(s) | 972, 996, 1662, 1998, 2088, 2769 |
| FspBI | CTAG | 9 cut(s) | 1011, 1260, 1676, 2135, 2240, 2276, 2312, 2384, 2396 |
| FspI | TGCGCA | 1 cut(s) | 1221 |
| GlaI | GCGC | 3 cut(s) | 990, 1221, 2368 |
| GluI | GCNGC | 6 cut(s) | 972, 996, 1662, 1998, 2088, 2769 |
| GsaI | CCCAGC | 1 cut(s) | 1836 |
| GsuI | CTGGAG | 4 cut(s) | 377, 1151, 1374, 1838 |
| HaeII | RGCGCY | 1 cut(s) | 2370 |
| HaeIII | GGCC | 3 cut(s) | 194, 278, 1607 |
| HapII | CCGG | 1 cut(s) | 791 |
| HgaI | GACGC | 1 cut(s) | 2275 |
| HhaI | GCGC | 3 cut(s) | 991, 1222, 2369 |
| Hin6I | GCGC | 3 cut(s) | 989, 1220, 2367 |
| HinP1I | GCGC | 3 cut(s) | 989, 1220, 2367 |
| HincII | GTYRAC | 1 cut(s) | 2778 |
| HindII | GTYRAC | 1 cut(s) | 2778 |
| HpaII | CCGG | 1 cut(s) | 791 |
| HphI | GGTGA | 7 cut(s) | 737, 1259, 2106, 2200, 2884, 2929, 3010 |
| Hpy166II | GTNNAC | 1 cut(s) | 2778 |
| Hpy8I | GTNNAC | 1 cut(s) | 2778 |
| HpyAV | CCTTC | 5 cut(s) | 949, 1511, 1650, 2372, 2701 |
| HpyCH4III | ACNGT | 7 cut(s) | 1079, 1392, 1871, 2107, 2299, 2436, 2652 |
| HpyCH4IV | ACGT | 2 cut(s) | 32, 1047 |
| HpySE526I | ACGT | 2 cut(s) | 32, 1047 |
| HspAI | GCGC | 3 cut(s) | 989, 1220, 2367 |
| Ksp22I | TGATCA | 1 cut(s) | 1371 |
| LguI | GCTCTTC | 2 cut(s) | 528, 2286 |
| LmnI | GCTCC | 4 cut(s) | 687, 736, 1355, 3017 |
| Lsp1109I | GCAGC | 5 cut(s) | 983, 1007, 1673, 2009, 2755 |
| MaeI | CTAG | 9 cut(s) | 1011, 1260, 1676, 2135, 2240, 2276, 2312, 2384, 2396 |
| MaeII | ACGT | 2 cut(s) | 32, 1047 |
| MaeIII | GTNAC | 7 cut(s) | 793, 811, 1265, 1348, 1550, 1871, 1901 |
| MfeI | CAATTG | 2 cut(s) | 831, 2523 |
| MflI | RGATCY | 5 cut(s) | 283, 325, 574, 1983, 2173 |
| MhlI | GDGCHC | 4 cut(s) | 51, 2189, 2657, 2883 |
| MlsI | TGGCCA | 2 cut(s) | 194, 278 |
| MluNI | TGGCCA | 2 cut(s) | 194, 278 |
| MlyI | GAGTC | 4 cut(s) | 85, 854, 2139, 2558 |
| MmeI | TCCRAC | 4 cut(s) | 337, 1081, 2511, 2775 |
| Mox20I | TGGCCA | 2 cut(s) | 194, 278 |
| Mph1103I | ATGCAT | 1 cut(s) | 1288 |
| MroXI | GAANNNNTTC | 3 cut(s) | 246, 1566, 2594 |
| MscI | TGGCCA | 2 cut(s) | 194, 278 |
| MslI | CAYNNNNRTG | 4 cut(s) | 137, 1625, 1913, 2996 |
| Msp20I | TGGCCA | 2 cut(s) | 194, 278 |
| MspA1I | CMGCKG | 2 cut(s) | 355, 637 |
| MspCI | CTTAAG | 1 cut(s) | 1432 |
| MspI | CCGG | 1 cut(s) | 791 |
| MspR9I | CCNGG | 3 cut(s) | 791, 1856, 3031 |
| MunI | CAATTG | 2 cut(s) | 831, 2523 |
| Mva1269I | GAATGC | 6 cut(s) | 389, 475, 1447, 1664, 2391, 2755 |
| MvaI | CCWGG | 2 cut(s) | 1856, 3031 |
| MvnI | CGCG | 2 cut(s) | 991, 2090 |
| NciI | CCSGG | 1 cut(s) | 791 |
| NcoI | CCATGG | 1 cut(s) | 603 |
| NheI | GCTAGC | 1 cut(s) | 2134 |
| NlaIV | GGNNCC | 3 cut(s) | 738, 1070, 1494 |
| NmuCI | GTSAC | 4 cut(s) | 811, 1265, 1348, 1871 |
| NsbI | TGCGCA | 1 cut(s) | 1221 |
| NsiI | ATGCAT | 1 cut(s) | 1288 |
| NspI | RCATGY | 4 cut(s) | 1286, 1918, 2833, 2861 |
| NspV | TTCGAA | 2 cut(s) | 1762, 2361 |
| PaeI | GCATGC | 2 cut(s) | 1286, 2833 |
| PaqCI | CACCTGC | 1 cut(s) | 230 |
| PciI | ACATGT | 1 cut(s) | 2857 |
| PciSI | GCTCTTC | 2 cut(s) | 528, 2286 |
| PctI | GAATGC | 6 cut(s) | 389, 475, 1447, 1664, 2391, 2755 |
| PdmI | GAANNNNTTC | 3 cut(s) | 246, 1566, 2594 |
| PfeI | GAWTC | 8 cut(s) | 86, 339, 610, 964, 1507, 2403, 2536, 2659 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 887 |
| PkrI | GCNGC | 6 cut(s) | 973, 997, 1663, 1999, 2089, 2770 |
| PleI | GAGTC | 4 cut(s) | 84, 854, 2139, 2557 |
| PpsI | GAGTC | 4 cut(s) | 84, 854, 2139, 2557 |
| PscI | ACATGT | 1 cut(s) | 2857 |
| Psp6I | CCWGG | 2 cut(s) | 1854, 3029 |
| PspEI | GGTNACC | 1 cut(s) | 793 |
| PspFI | CCCAGC | 1 cut(s) | 1832 |
| PspGI | CCWGG | 2 cut(s) | 1854, 3029 |
| PspN4I | GGNNCC | 3 cut(s) | 738, 1070, 1494 |
| PspPI | GGNCC | 1 cut(s) | 1605 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 2415, 2447, 2469, 2501 |
| PstNI | CAGNNNCTG | 3 cut(s) | 329, 1129, 1352 |
| PsuI | RGATCY | 5 cut(s) | 283, 325, 574, 1983, 2173 |
| PvuII | CAGCTG | 2 cut(s) | 355, 637 |
| RsaI | GTAC | 6 cut(s) | 731, 1029, 1136, 1632, 1913, 2288 |
| RsaNI | GTAC | 6 cut(s) | 730, 1028, 1135, 1631, 1912, 2287 |
| RseI | CAYNNNNRTG | 4 cut(s) | 137, 1625, 1913, 2996 |
| SapI | GCTCTTC | 2 cut(s) | 528, 2286 |
| SatI | GCNGC | 6 cut(s) | 972, 996, 1662, 1998, 2088, 2769 |
| Sau96I | GGNCC | 1 cut(s) | 1605 |
| SchI | GAGTC | 4 cut(s) | 85, 854, 2139, 2558 |
| ScrFI | CCNGG | 3 cut(s) | 791, 1856, 3031 |
| SduI | GDGCHC | 4 cut(s) | 51, 2189, 2657, 2883 |
| SfcI | CTRYAG | 2 cut(s) | 585, 2544 |
| SfuI | TTCGAA | 2 cut(s) | 1762, 2361 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 137, 1625, 1913, 2996 |
| SmlI | CTYRAG | 4 cut(s) | 50, 1432, 1844, 1919 |
| SmoI | CTYRAG | 4 cut(s) | 50, 1432, 1844, 1919 |
| SphI | GCATGC | 2 cut(s) | 1286, 2833 |
| SsiI | CCGC | 3 cut(s) | 401, 445, 2088 |
| SspI | AATATT | 2 cut(s) | 1234, 1768 |
| SspMI | CTAG | 9 cut(s) | 1011, 1260, 1676, 2135, 2240, 2276, 2312, 2384, 2396 |
| StyD4I | CCNGG | 3 cut(s) | 789, 1854, 3029 |
| StyI | CCWWGG | 4 cut(s) | 528, 603, 1005, 1555 |
| TaaI | ACNGT | 7 cut(s) | 1079, 1392, 1871, 2107, 2299, 2436, 2652 |
| TaiI | ACGT | 2 cut(s) | 35, 1050 |
| TaqI | TCGA | 3 cut(s) | 135, 1762, 2361 |
| TatI | WGTACW | 4 cut(s) | 729, 1134, 1911, 2286 |
| TauI | GCSGC | 1 cut(s) | 2090 |
| TfiI | GAWTC | 8 cut(s) | 86, 339, 610, 964, 1507, 2403, 2536, 2659 |
| TscAI | CASTG | 9 cut(s) | 447, 771, 892, 1130, 1167, 1357, 2019, 2304, 2655 |
| TseFI | GTSAC | 4 cut(s) | 811, 1265, 1348, 1871 |
| TseI | GCWGC | 5 cut(s) | 971, 995, 1661, 1997, 2768 |
| Tsp45I | GTSAC | 4 cut(s) | 811, 1265, 1348, 1871 |
| TspGWI | ACGGA | 1 cut(s) | 2679 |
| TspRI | CASTG | 9 cut(s) | 447, 771, 892, 1130, 1167, 1357, 2019, 2304, 2655 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 887 |
| Vha464I | CTTAAG | 1 cut(s) | 1432 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 820 |
| XceI | RCATGY | 4 cut(s) | 1286, 1918, 2833, 2861 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 286, 2011 |
| XmnI | GAANNNNTTC | 3 cut(s) | 246, 1566, 2594 |
| XspI | CTAG | 9 cut(s) | 1011, 1260, 1676, 2135, 2240, 2276, 2312, 2384, 2396 |
| Zsp2I | ATGCAT | 1 cut(s) | 1288 |