Rorug04G0298000

sodium-coupled neutral amino acid transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000616
Physical Location & Seq
Reverse (-)
47299717 .. 47303979
4263 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0298000.1

Sequence Viewer

Length: 2091 bp
ATGAGGGGTGGCAGTCCTTCAATCGAAATGTATAATGTTCCTGAACATGCAAATAATGACGTTTATATGATCCAAGGCATGGAACCAAATATGCATTTTACGACTCCCTTTGAACAAGTTGATGCCATGTACAACGAAGGAGCCCCCGAGTATGTAGTTGATCAGGGCATGTATTATCCTACTGCCACCAACTATGGGTACTACTGTACAGGATTTGAATCACCCGGTGAATGGGAGGACCAACGTAGGACTTTTGGTGTAGATGGTCCAGATGTCCAGTACGCGGGTGCGCAAAATGAAAGTTTGCCTTATGTATATTATACACCTGGCTATGGATATGCACAGACTTCATACAACCCATACAACCCTTACATACCTGGTGCTATGATAGGTGTTGATGGCCAACAGTATTATACCGTCCCCCCTTATCAGAATTCTGTCTCTTCACCTGCTTATGTCCCTTTTGTTGCTCAGCCGGATGTCATTCCCAATAGTTCACCTGACTCTTTGTACGATACTGGAACATCTATTAATAGACCTGGTGGAAGAGGCCTTAAATATAATTTGAATTCAGCTTCTGCAGCCTTCCCTAACACTCCTAAGCCATCCTCGAATCAGATGAGCCCCTTGACTAGGTTATTAGAAAGGCCAAGAGGCAATGTTGGACCAAGCAAGCCAGCTGTAACTCATGGCAGTGTTTCTTCTGGTCGTTTTCCAAACCCTGCTCACCAGAGTAGAAGTGCATCCGGCTCAGTTCCAGCCGTGGATAACCTTTCAAATGGGAAAGTTTTGCCTCATCATAATCAATTGAAGGTAGCAATCCCTGTAGGTAATGGCTTGTCTGATTTTGGATCGGGTGCACAAGGACGAGATGCTGTGGCTAAGCTTCGGCCAAAGTTCCATGTTGGCAGGGCCTTGAATGATATACATGGTAATATAGAGCCGTTGAGTGAGCAGAATTGTGGTCCTAGAGTCAATAGATTAAAAAAGCAATTAGCTGTTAAAGCCTACACAACCAAGGCAGGAGATAGTAATGCGCAAGGAAATATCATTATTCGCACTGATCAGTATAACAAGGATAATCTCCCAGTTGATTATGTGCATGCAAAATTTTTTGTAATAAAATCATACAGCGAGGATGATGTGCATAAGAGTGTTAAATACAATGTCTGGTCATCCACACCGCATGGCAACAAAAAACTAAGCAGTGCTTATGAAGATGCCCAACGAATAGCTGCAGGGAACCCTGGAGGCTGTCCTATCTTCCTCTTCTTTTCGGTAAATGCAAGTGGTCAATTCTGTGGCGTCGCAGAGATGGTTGGCCCGGTTGACTTCAACAAGGATATGGACTTTTGGCAGCAAGATAAATGGAGTGGGAGCTTCCCTGTTATTTGGCACATTGTCAAAGATGTGTCGAACACCAGTGTTAGGCACATCGTATTGGAGAACAATGAGAACAAGCCGGTGACTAATAGCAGGGATACACAAGAGATCATGTATAAGAAAGGCTTGGAGATGTTGAAAATATTCAAGAATCACATGATGAAGACCTCATTGCTTGATGACTTTATGTACTATGAAGACCGTCAGAAAATCATGCAGGATGAGAGAGGCAGGTTTCTTGTTAGAAATTTTGAGACTCCATTCTTAGTAACAGCATTGGGACCCCCACGCAAGCTGAACCCTGTTCGTGAGCTGCCTCACAGCAAAGAGGAAAAAGACACCAAACCTAATGATGCAAACAACTCAGAAAAGTCTCTGGTTTCTGCATCTGAGCAGATTTCCTCAAACTTAGATGTTAAAGATGCGAGTATTAGGAGTGAAAATTCAGAGAAAAAGGCACTTGAAGCAGAAGATGATGCTGTATCTACCTTAAAAATTAGTTCGCTTACTATTGATCCAAAGCAGGTGGAGCTTGATTCTTCAGCTGGTGCTGCTACTGCTACTTCAAAAAATGTTGATGTTGTCACTGTAGGCTCAATTCCTGTTAGAGTTAATGGATTTGCTGAATCCTTGGGTACTTTAACTGTTGGAACGATCCCTCTGGATCCTAGAGCACTAAAACTCGAGAAGGGCAGTTCTCTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04724 ko04727 ko04974 map04724 map04727 map04974
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

696

Amino Acids

76.52

Weight (kDa)

6.14

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 369 - 511 6.6e-49 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000616)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30390 AT3G30390 AT3G30390 AT5G38820 AT5G38820 AT5G38820
fragaria_vesca FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_4g28960 FvH4_6g46060 FvH4_6g46060 FvH4_6g46080
malus_domestica MD09G1077200.v1.1 MD09G1077400.v1.1 MD15G1064300.v1.1 MD16G1053900.v1.1 MD17G1067600.v1.1 MD17G1067800.v1.1
prunus_persica Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G418300_v2.0.a1 Prupe.3G246600_v2.0.a1 Prupe.3G246800_v2.0.a1 Prupe.3G246900_v2.0.a1
pyrus_communis pycom09g00430 pycom09g00450 pycom15g06100 pycom16g04690 pycom17g06820
rosa_chinensis RchiOBHm_Chr2g0164381 RchiOBHm_Chr2g0164401 RchiOBHm_Chr4g0437101 RchiOBHm_Chr6g0310121
rosa_laevigata RLG00000006468 RLG00000010508 RLG00000021456 RLG00000021458
rosa_multiflora Rmu_co8348867.1_g000001 Rmu_sc0000294.1_g000029 Rmu_sc0009487.1_g000003 Rmu_sc0018759.1_g000001 Rmu_sc0021401.1_g000003 Rmu_ssc0000006.1_g000009
rosa_roxburghii Rroxscaffold_2G00086590 Rroxscaffold_2G00086610 Rroxscaffold_5G00378170 Rroxscaffold_7G00158840
rosa_rugosa Rorug02G0508200 Rorug02G0508300 Rorug04G0298000 Rorug06G0377600
rosa_samantha Rh2AG576200 Rh2AG576400 Rh2BG587200 Rh2BG587400 Rh2CG558000 Rh2CG558200 Rh2DG596900 Rh2DG597200 Rh4AG352800 Rh4BG362300 Rh4CG376500 Rh4DG356300 Rh6AG491600 Rh6BG501000 Rh6CG506000 Rh6DG492100
rosa_wichuraiana Rw2G047720 Rw2G047740 Rw2G047820 Rw2G047840 Rw4G030890 Rw6G042770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 457, 1897
Acc16I TGCGCA 2 cut(s) 291, 1038
Acc36I ACCTGC 3 cut(s) 457, 1605, 1897
AccB7I CCANNNNNTGG 1 cut(s) 79
AccII CGCG 1 cut(s) 284
AciI CCGC 2 cut(s) 284, 1184
AclWI GGATC 6 cut(s) 64, 859, 1892, 2032, 2042, 2055
AcoI YGGCCR 2 cut(s) 400, 890
AcsI RAATTY 5 cut(s) 433, 568, 1109, 1630, 1825
AcuI CTGAAG 1 cut(s) 1908
AcyI GRCGYC 1 cut(s) 1305
AdeI CACNNNGTG 1 cut(s) 227
AfaI GTAC 7 cut(s) 131, 200, 208, 281, 512, 1574, 2020
AfiI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1428
AjnI CCWGG 4 cut(s) 325, 376, 538, 1246
Alw21I GWGCWC 2 cut(s) 862, 2059
Alw26I GTCTC 3 cut(s) 445, 1631, 1761
Alw44I GTGCAC 1 cut(s) 858
AlwI GGATC 6 cut(s) 64, 859, 1892, 2032, 2042, 2055
AlwNI CAGNNNCTG 1 cut(s) 578
Ama87I CYCGRG 2 cut(s) 146, 2066
AoxI GGCC 6 cut(s) 400, 550, 647, 890, 912, 1321
ApaLI GTGCAC 1 cut(s) 858
ApeKI GCWGC 5 cut(s) 581, 1235, 1357, 1696, 1934
ApoI RAATTY 5 cut(s) 433, 568, 1109, 1630, 1825
AseI ATTAAT 1 cut(s) 531
Asp700I GAANNNNTTC 1 cut(s) 1526
AspLEI GCGC 2 cut(s) 292, 1039
AspS9I GGNCC 7 cut(s) 238, 266, 665, 912, 965, 1322, 1664
AsuC2I CCSGG 2 cut(s) 225, 1325
AsuHPI GGTGA 6 cut(s) 213, 239, 438, 489, 719, 1477
AvaI CYCGRG 2 cut(s) 146, 2066
AvaII GGWCC 5 cut(s) 238, 266, 665, 965, 1664
BaeGI GKGCMC 1 cut(s) 862
BaeI ACNNNNGTAYC 2 cut(s) 190, 223
BalI TGGCCA 1 cut(s) 402
BamHI GGATCC 1 cut(s) 2047
BanII GRGCYC 2 cut(s) 145, 626
BbsI GAAGAC 2 cut(s) 1553, 1587
Bbv12I GWGCWC 2 cut(s) 862, 2059
BbvI GCAGC 5 cut(s) 593, 1222, 1369, 1683, 1921
BccI CCATC 4 cut(s) 257, 392, 613, 1309
BceAI ACGGC 2 cut(s) 746, 928
BciT130I CCWGG 4 cut(s) 327, 378, 540, 1248
BciVI GTATCC 1 cut(s) 1474
BclI TGATCA 2 cut(s) 160, 1063
BcnI CCSGG 2 cut(s) 225, 1325
BcoDI GTCTC 3 cut(s) 445, 1631, 1761
BfaI CTAG 3 cut(s) 633, 969, 2052
BfmI CTRYAG 4 cut(s) 579, 825, 1236, 1971
BfuAI ACCTGC 3 cut(s) 457, 1605, 1897
BfuI GTATCC 1 cut(s) 1474
BisI GCNGC 5 cut(s) 582, 1236, 1358, 1697, 1935
BlpI GCTNAGC 2 cut(s) 471, 882
BlsI GCNGC 5 cut(s) 583, 1237, 1359, 1698, 1936
Bme1390I CCNGG 6 cut(s) 225, 327, 378, 540, 1248, 1325
Bme18I GGWCC 5 cut(s) 238, 266, 665, 965, 1664
BmeT110I CYCGRG 2 cut(s) 146, 2066
BmgT120I GGNCC 7 cut(s) 238, 266, 665, 912, 965, 1322, 1664
BmiI GGNNCC 6 cut(s) 84, 142, 1244, 1665, 1666, 2049
BmrFI CCNGG 6 cut(s) 225, 327, 378, 540, 1248, 1325
BmrI ACTGGG 1 cut(s) 1082
BmsI GCATC 8 cut(s) 112, 752, 862, 1210, 1726, 1778, 1795, 1849
BmuI ACTGGG 1 cut(s) 1082
BpiI GAAGAC 2 cut(s) 1553, 1587
BpmI CTGGAG 1 cut(s) 1269
Bpu10I CCTNAGC 1 cut(s) 600
Bpu1102I GCTNAGC 2 cut(s) 471, 882
BpuMI CCSGG 2 cut(s) 225, 1325
BsaBI GATNNNNATC 1 cut(s) 217
BsaHI GRCGYC 1 cut(s) 1305
BsaJI CCNNGG 5 cut(s) 73, 762, 1017, 1246, 2013
Bsc4I CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1428
Bse118I RCCGGY 1 cut(s) 1462
Bse1I ACTGG 4 cut(s) 277, 523, 1088, 1422
Bse3DI GCAATG 2 cut(s) 664, 1553
Bse8I GATNNNNATC 1 cut(s) 217
BseBI CCWGG 4 cut(s) 327, 378, 540, 1248
BseDI CCNNGG 5 cut(s) 73, 762, 1017, 1246, 2013
BseGI GGATG 6 cut(s) 484, 605, 743, 1144, 1175, 1609
BseJI GATNNNNATC 1 cut(s) 217
BseLI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1428
BseMI GCAATG 2 cut(s) 664, 1553
BseMII CTCAG 4 cut(s) 485, 765, 1761, 1764
BseNI ACTGG 4 cut(s) 277, 523, 1088, 1422
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 5 cut(s) 593, 1222, 1369, 1683, 1921
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 6 cut(s) 402, 552, 649, 892, 914, 1323
BsiHKAI GWGCWC 2 cut(s) 862, 2059
BsiHKCI CYCGRG 2 cut(s) 146, 2066
BsiSI CCGG 5 cut(s) 225, 476, 747, 1325, 1463
BslFI GGGAC 3 cut(s) 404, 443, 1677
BslI CCNNNNNNNGG 7 cut(s) 79, 195, 231, 283, 332, 633, 1428
BsmAI GTCTC 3 cut(s) 445, 1631, 1761
BsmFI GGGAC 3 cut(s) 404, 443, 1677
BsnI GGCC 6 cut(s) 402, 552, 649, 892, 914, 1323
BsoBI CYCGRG 2 cut(s) 146, 2066
Bsp1286I GDGCHC 4 cut(s) 145, 626, 862, 2059
Bsp1407I TGTACA 2 cut(s) 129, 206
Bsp143I GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
Bsp1720I GCTNAGC 2 cut(s) 471, 882
BspACI CCGC 2 cut(s) 284, 1184
BspANI GGCC 6 cut(s) 402, 552, 649, 892, 914, 1323
BspCNI CTCAG 4 cut(s) 484, 764, 1760, 1765
BspFNI CGCG 1 cut(s) 284
BspLI GGNNCC 6 cut(s) 84, 142, 1244, 1665, 1666, 2049
BspMAI CTGCAG 2 cut(s) 583, 1240
BspMI ACCTGC 3 cut(s) 457, 1605, 1897
BspPI GGATC 6 cut(s) 64, 859, 1892, 2032, 2042, 2055
BsrDI GCAATG 2 cut(s) 664, 1553
BsrFI RCCGGY 1 cut(s) 1462
BsrGI TGTACA 2 cut(s) 129, 206
BsrI ACTGG 4 cut(s) 277, 523, 1088, 1422
BssAI RCCGGY 1 cut(s) 1462
BssECI CCNNGG 5 cut(s) 73, 762, 1017, 1246, 2013
BssMI GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
BssNI GRCGYC 1 cut(s) 1305
BssT1I CCWWGG 3 cut(s) 73, 1017, 2013
Bst2UI CCWGG 4 cut(s) 327, 378, 540, 1248
Bst4CI ACNGT 6 cut(s) 206, 408, 418, 1586, 1972, 2029
Bst6I CTCTTC 3 cut(s) 448, 541, 1274
BstACI GRCGYC 1 cut(s) 1305
BstAUI TGTACA 2 cut(s) 129, 206
BstC8I GCNNGC 4 cut(s) 674, 678, 1104, 1676
BstDEI CTNAG 9 cut(s) 471, 600, 751, 882, 1202, 1648, 1747, 1773, 1792
BstDSI CCRYGG 1 cut(s) 762
BstENI CCTNNNNNAGG 1 cut(s) 631
BstF5I GGATG 6 cut(s) 484, 605, 743, 1144, 1175, 1609
BstFNI CGCG 1 cut(s) 284
BstHHI GCGC 2 cut(s) 292, 1039
BstKTI GATC 8 cut(s) 72, 163, 854, 1066, 1494, 1900, 2040, 2050
BstMAI GTCTC 3 cut(s) 445, 1631, 1761
BstMBI GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
BstMWI GCNNNNNNNGC 6 cut(s) 581, 1004, 1847, 1912, 1934, 1940
BstNI CCWGG 4 cut(s) 327, 378, 540, 1248
BstNSI RCATGY 3 cut(s) 50, 172, 1106
BstSCI CCNGG 6 cut(s) 223, 325, 376, 538, 1246, 1323
BstSFI CTRYAG 4 cut(s) 579, 825, 1236, 1971
BstSLI GKGCMC 1 cut(s) 862
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 5 cut(s) 593, 1222, 1369, 1683, 1921
BstV2I GAAGAC 2 cut(s) 1553, 1587
BstX2I RGATCY 1 cut(s) 2047
BstYI RGATCY 1 cut(s) 2047
BsuI GTATCC 1 cut(s) 1474
BsuRI GGCC 6 cut(s) 402, 552, 649, 892, 914, 1323
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 6 cut(s) 484, 605, 743, 1144, 1175, 1609
BtsI GCAGTG 2 cut(s) 700, 1213
BtsIMutI CAGTG 5 cut(s) 700, 1059, 1213, 1429, 1968
BveI ACCTGC 3 cut(s) 457, 1605, 1897
Cac8I GCNNGC 4 cut(s) 674, 678, 1104, 1676
CaiI CAGNNNCTG 1 cut(s) 578
CfoI GCGC 2 cut(s) 292, 1039
Cfr10I RCCGGY 1 cut(s) 1462
Cfr13I GGNCC 7 cut(s) 238, 266, 665, 912, 965, 1322, 1664
CseI GACGC 1 cut(s) 1294
CsiI ACCWGGT 2 cut(s) 376, 538
Csp6I GTAC 7 cut(s) 130, 199, 207, 280, 511, 1573, 2019
CspCI CAANNNNNGTGG 2 cut(s) 1890, 1925
CviQI GTAC 7 cut(s) 130, 199, 207, 280, 511, 1573, 2019
DdeI CTNAG 9 cut(s) 471, 600, 751, 882, 1202, 1648, 1747, 1773, 1792
DpnI GATC 8 cut(s) 71, 162, 853, 1065, 1493, 1899, 2039, 2049
DpnII GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
DraIII CACNNNGTG 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 400, 890
Eam1104I CTCTTC 3 cut(s) 448, 541, 1274
EarI CTCTTC 3 cut(s) 448, 541, 1274
Eco130I CCWWGG 3 cut(s) 73, 1017, 2013
Eco147I AGGCCT 1 cut(s) 552
Eco24I GRGCYC 2 cut(s) 145, 626
Eco47I GGWCC 5 cut(s) 238, 266, 665, 965, 1664
Eco57I CTGAAG 1 cut(s) 1908
Eco88I CYCGRG 2 cut(s) 146, 2066
EcoNI CCTNNNNNAGG 1 cut(s) 631
EcoO109I RGGNCCY 2 cut(s) 912, 1664
EcoRI GAATTC 2 cut(s) 433, 568
EcoRII CCWGG 4 cut(s) 325, 376, 538, 1246
EcoT14I CCWWGG 3 cut(s) 73, 1017, 2013
EcoT22I ATGCAT 1 cut(s) 96
EcoT38I GRGCYC 2 cut(s) 145, 626
ErhI CCWWGG 3 cut(s) 73, 1017, 2013
FalI AAGNNNNNCTT 6 cut(s) 292, 324, 1195, 1227, 1493, 1525
FaqI GGGAC 3 cut(s) 404, 443, 1677
FauI CCCGC 1 cut(s) 277
FbaI TGATCA 2 cut(s) 160, 1063
Fnu4HI GCNGC 5 cut(s) 582, 1236, 1358, 1697, 1935
FokI GGATG 6 cut(s) 491, 592, 730, 1151, 1162, 1616
FriOI GRGCYC 2 cut(s) 145, 626
Fsp4HI GCNGC 5 cut(s) 582, 1236, 1358, 1697, 1935
FspBI CTAG 3 cut(s) 633, 969, 2052
FspI TGCGCA 2 cut(s) 291, 1038
GlaI GCGC 2 cut(s) 291, 1038
GluI GCNGC 5 cut(s) 582, 1236, 1358, 1697, 1935
GsuI CTGGAG 1 cut(s) 1269
HaeIII GGCC 6 cut(s) 402, 552, 649, 892, 914, 1323
HapII CCGG 5 cut(s) 225, 476, 747, 1325, 1463
HgaI GACGC 1 cut(s) 1294
HhaI GCGC 2 cut(s) 292, 1039
Hin1I GRCGYC 1 cut(s) 1305
Hin6I GCGC 2 cut(s) 290, 1037
HinP1I GCGC 2 cut(s) 290, 1037
HincII GTYRAC 1 cut(s) 1330
HindII GTYRAC 1 cut(s) 1330
HindIII AAGCTT 1 cut(s) 884
HinfI GANTC 9 cut(s) 103, 218, 503, 613, 972, 1534, 1639, 1919, 2009
HpaII CCGG 5 cut(s) 225, 476, 747, 1325, 1463
HphI GGTGA 6 cut(s) 213, 239, 438, 489, 719, 1477
Hpy166II GTNNAC 3 cut(s) 497, 860, 1330
Hpy188I TCNGA 7 cut(s) 432, 618, 844, 1590, 1750, 1774, 1831
Hpy188III TCNNGA 6 cut(s) 41, 269, 1531, 1691, 2045, 2068
Hpy8I GTNNAC 3 cut(s) 497, 860, 1330
Hpy99I CGWCG 1 cut(s) 1310
HpyAV CCTTC 5 cut(s) 27, 131, 595, 805, 2065
HpyCH4III ACNGT 6 cut(s) 206, 408, 418, 1586, 1972, 2029
HpyCH4IV ACGT 2 cut(s) 60, 244
HpyF10VI GCNNNNNNNGC 6 cut(s) 581, 1004, 1847, 1912, 1934, 1940
HpyF3I CTNAG 9 cut(s) 471, 600, 751, 882, 1202, 1648, 1747, 1773, 1792
HpySE526I ACGT 2 cut(s) 60, 244
Hsp92I GRCGYC 1 cut(s) 1305
HspAI GCGC 2 cut(s) 290, 1037
KflI GGGWCCC 1 cut(s) 1664
Ksp22I TGATCA 2 cut(s) 160, 1063
Kzo9I GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
LmnI GCTCC 3 cut(s) 140, 1377, 1912
Lsp1109I GCAGC 5 cut(s) 593, 1222, 1369, 1683, 1921
LweI GCATC 8 cut(s) 112, 752, 862, 1210, 1726, 1778, 1795, 1849
MabI ACCWGGT 2 cut(s) 376, 538
MaeI CTAG 3 cut(s) 633, 969, 2052
MaeII ACGT 2 cut(s) 60, 244
MaeIII GTNAC 4 cut(s) 682, 1465, 1651, 1966
MalI GATC 8 cut(s) 71, 162, 853, 1065, 1493, 1899, 2039, 2049
MboI GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
MfeI CAATTG 1 cut(s) 806
MflI RGATCY 1 cut(s) 2047
MhlI GDGCHC 4 cut(s) 145, 626, 862, 2059
MlsI TGGCCA 1 cut(s) 402
MluNI TGGCCA 1 cut(s) 402
MlyI GAGTC 4 cut(s) 97, 497, 981, 1633
MmeI TCCRAC 2 cut(s) 643, 2011
Mox20I TGGCCA 1 cut(s) 402
Mph1103I ATGCAT 1 cut(s) 96
MroXI GAANNNNTTC 1 cut(s) 1526
MscI TGGCCA 1 cut(s) 402
MslI CAYNNNNRTG 2 cut(s) 693, 1152
Msp20I TGGCCA 1 cut(s) 402
MspA1I CMGCKG 2 cut(s) 680, 1928
MspI CCGG 5 cut(s) 225, 476, 747, 1325, 1463
MspR9I CCNGG 6 cut(s) 225, 327, 378, 540, 1248, 1325
MunI CAATTG 1 cut(s) 806
MvaI CCWGG 4 cut(s) 327, 378, 540, 1248
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 6 cut(s) 581, 1004, 1847, 1912, 1934, 1940
NciI CCSGG 2 cut(s) 225, 1325
NdeII GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
NlaIV GGNNCC 6 cut(s) 84, 142, 1244, 1665, 1666, 2049
NmuCI GTSAC 2 cut(s) 1465, 1966
NsbI TGCGCA 2 cut(s) 291, 1038
NsiI ATGCAT 1 cut(s) 96
NspI RCATGY 3 cut(s) 50, 172, 1106
PaeI GCATGC 1 cut(s) 1106
PaeR7I CTCGAG 1 cut(s) 2066
PaqCI CACCTGC 2 cut(s) 457, 1897
PceI AGGCCT 1 cut(s) 552
PdmI GAANNNNTTC 1 cut(s) 1526
PfeI GAWTC 5 cut(s) 218, 613, 1534, 1919, 2009
PflMI CCANNNNNTGG 1 cut(s) 79
PkrI GCNGC 5 cut(s) 583, 1237, 1359, 1698, 1936
PleI GAGTC 4 cut(s) 97, 497, 980, 1633
PpsI GAGTC 4 cut(s) 97, 497, 980, 1633
PpuMI RGGWCCY 1 cut(s) 1664
PshBI ATTAAT 1 cut(s) 531
Psp5II RGGWCCY 1 cut(s) 1664
Psp6I CCWGG 4 cut(s) 325, 376, 538, 1246
PspGI CCWGG 4 cut(s) 325, 376, 538, 1246
PspN4I GGNNCC 6 cut(s) 84, 142, 1244, 1665, 1666, 2049
PspPI GGNCC 7 cut(s) 238, 266, 665, 912, 965, 1322, 1664
PspPPI RGGWCCY 1 cut(s) 1664
PstI CTGCAG 2 cut(s) 583, 1240
PstNI CAGNNNCTG 1 cut(s) 578
PsuI RGATCY 1 cut(s) 2047
PvuII CAGCTG 2 cut(s) 680, 1928
RsaI GTAC 7 cut(s) 131, 200, 208, 281, 512, 1574, 2020
RsaNI GTAC 7 cut(s) 130, 199, 207, 280, 511, 1573, 2019
RseI CAYNNNNRTG 2 cut(s) 693, 1152
SatI GCNGC 5 cut(s) 582, 1236, 1358, 1697, 1935
Sau3AI GATC 8 cut(s) 69, 160, 851, 1063, 1491, 1897, 2037, 2047
Sau96I GGNCC 7 cut(s) 238, 266, 665, 912, 965, 1322, 1664
SchI GAGTC 4 cut(s) 97, 497, 981, 1633
ScrFI CCNGG 6 cut(s) 225, 327, 378, 540, 1248, 1325
SduI GDGCHC 4 cut(s) 145, 626, 862, 2059
SexAI ACCWGGT 2 cut(s) 376, 538
SfaNI GCATC 8 cut(s) 112, 752, 862, 1210, 1726, 1778, 1795, 1849
SfcI CTRYAG 4 cut(s) 579, 825, 1236, 1971
Sfr274I CTCGAG 1 cut(s) 2066
SinI GGWCC 5 cut(s) 238, 266, 665, 965, 1664
SlaI CTCGAG 1 cut(s) 2066
SmiMI CAYNNNNRTG 2 cut(s) 693, 1152
SmlI CTYRAG 1 cut(s) 2066
SmoI CTYRAG 1 cut(s) 2066
SphI GCATGC 1 cut(s) 1106
SseBI AGGCCT 1 cut(s) 552
SsiI CCGC 2 cut(s) 284, 1184
SspI AATATT 1 cut(s) 1527
SspMI CTAG 3 cut(s) 633, 969, 2052
StuI AGGCCT 1 cut(s) 552
StyD4I CCNGG 6 cut(s) 223, 325, 376, 538, 1246, 1323
StyI CCWWGG 3 cut(s) 73, 1017, 2013
TaaI ACNGT 6 cut(s) 206, 408, 418, 1586, 1972, 2029
TaiI ACGT 2 cut(s) 63, 247
TaqI TCGA 4 cut(s) 24, 611, 1415, 2067
TatI WGTACW 3 cut(s) 129, 206, 1572
TfiI GAWTC 5 cut(s) 218, 613, 1534, 1919, 2009
TscAI CASTG 5 cut(s) 700, 1066, 1213, 1429, 1975
TseFI GTSAC 2 cut(s) 1465, 1966
TseI GCWGC 5 cut(s) 581, 1235, 1357, 1696, 1934
Tsp45I GTSAC 2 cut(s) 1465, 1966
TspDTI ATGAA 5 cut(s) 312, 339, 1230, 1559, 1593
TspRI CASTG 5 cut(s) 700, 1066, 1213, 1429, 1975
Van91I CCANNNNNTGG 1 cut(s) 79
VneI GTGCAC 1 cut(s) 858
VpaK11BI GGWCC 5 cut(s) 238, 266, 665, 965, 1664
VspI ATTAAT 1 cut(s) 531
XagI CCTNNNNNAGG 1 cut(s) 631
XapI RAATTY 5 cut(s) 433, 568, 1109, 1630, 1825
XceI RCATGY 3 cut(s) 50, 172, 1106
XhoI CTCGAG 1 cut(s) 2066
XmnI GAANNNNTTC 1 cut(s) 1526
XspI CTAG 3 cut(s) 633, 969, 2052
Zsp2I ATGCAT 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.