Rroxscaffold_7G00158840

sodium-coupled neutral amino acid transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000616
Physical Location & Seq
Forward (+)
2148553 .. 2151010
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00158840.1

Sequence Viewer

Length: 1263 bp
ATGACAATTCCGACCGCCGACCGGAAATTCCGGCGGAGCCCCAAAGCCCCGCTGTTACCCCAAAAGCGCGACGACAATGAGCGAGTCGAGGCCGGCTTCGACGGCGCGTCGTTCTCCGGCGCCGTGTTCAACCTCTCCACCACAATCGTCGGCGCCGGAATCATGGCCCTGCCGTCCGCCGTCAAGCAACTGGGGTTGATTCCCGGCCTAATTATGATCGTATTGGGCGCCGTGCTGACCGAATCGTCCATCGACATGATCCTCCGGTTCACACGCGCCTCCAAGACATCCTCGTATTCCGGTCTGGTCGGCGACTCGTTCCGTGGGCCGGGCCGGAACCTCCTCCAGGTCTGCGTCGTCGTCAACAACCTCGGCATGCTCGTCGTCTACATGATCATCATCGGTGATGTGCTGTCGGGGACCTGGTCGGGTGGGGTCCACCACTCGGGTGTGATGGAGGAATGGTTTGGTCAGCGTTGGTGGACCGCGCGATTCTCGCTGCTACTTTTCACCACGCTTTCTGTGCTCGCGCCTCTTATTTCTTTCAAGCGCGTGGATTCGTTGAGATACACATCGGCATTGTCAGTTGGTTTGGCGGTTGTGTTTGTAGCGATCATAGCCGGAGTGGCGATAGTTAAGTTGATAGAAGGAGGGGTTGGATTTCCACGGTTGATGCCGAAGCTTGAGGACCAAGCATCCTTTTGGAAGCTTTTCACTACCATTCCCATTCTTGTTACTGCCTATATCTGCCACCATAACATTCACCCTATTGAGAACGAGCTAGTAGACCCTAACCACATGAAGTCAATAGTACGAACATCACTTACATTTTGCTCTTCTGTGTACGTTGCGACCAGCTTCTTTGGTGTTCTTCTCTTTGGGGATCAAACACTGGATGATGTACTGGCAAATTTTGACGGTGATCTTGGAATTCCATATAGCTCATTTCTTGATGATATTGTTAGAGTGAGCTATGGCCTCCACCTGATGCTTGTTTTCCCAATTGTATTTTTCTCCCTTCGCCTCAATTTGGATGGGCTTCTTTTTCCCTATGCCATTCCTATTGCCTTTGACAACCGAAGATTCTACTCAGTAACAGCAGCACTGATGGGTTTTATCTTTTGGGAGCCAATTTTATTCCCAGTATCTGGGATGCCTTTCAGTTCACAGGTGCTACTGCTGCGATCTCCGTTGGTTTCATATTTCCAGCTGCCGTTGCCCTCAGGGATACTCATGGAATTGCAACAAAGAAGGACAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04724 ko04727 ko04974 map04724 map04727 map04974
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

420

Amino Acids

46.3

Weight (kDa)

7.75

Isoelectric Point (pI)

42.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 36 - 351 9.1e-49 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 37 - 265 3.5e-09 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000616)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30390 AT3G30390 AT3G30390 AT5G38820 AT5G38820 AT5G38820
fragaria_vesca FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_4g28960 FvH4_6g46060 FvH4_6g46060 FvH4_6g46080
malus_domestica MD09G1077200.v1.1 MD09G1077400.v1.1 MD15G1064300.v1.1 MD16G1053900.v1.1 MD17G1067600.v1.1 MD17G1067800.v1.1
prunus_persica Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G418300_v2.0.a1 Prupe.3G246600_v2.0.a1 Prupe.3G246800_v2.0.a1 Prupe.3G246900_v2.0.a1
pyrus_communis pycom09g00430 pycom09g00450 pycom15g06100 pycom16g04690 pycom17g06820
rosa_chinensis RchiOBHm_Chr2g0164381 RchiOBHm_Chr2g0164401 RchiOBHm_Chr4g0437101 RchiOBHm_Chr6g0310121
rosa_laevigata RLG00000006468 RLG00000010508 RLG00000021456 RLG00000021458
rosa_multiflora Rmu_co8348867.1_g000001 Rmu_sc0000294.1_g000029 Rmu_sc0009487.1_g000003 Rmu_sc0018759.1_g000001 Rmu_sc0021401.1_g000003 Rmu_ssc0000006.1_g000009
rosa_roxburghii Rroxscaffold_2G00086590 Rroxscaffold_2G00086610 Rroxscaffold_5G00378170 Rroxscaffold_7G00158840
rosa_rugosa Rorug02G0508200 Rorug02G0508300 Rorug04G0298000 Rorug06G0377600
rosa_samantha Rh2AG576200 Rh2AG576400 Rh2BG587200 Rh2BG587400 Rh2CG558000 Rh2CG558200 Rh2DG596900 Rh2DG597200 Rh4AG352800 Rh4BG362300 Rh4CG376500 Rh4DG356300 Rh6AG491600 Rh6BG501000 Rh6CG506000 Rh6DG492100
rosa_wichuraiana Rw2G047720 Rw2G047740 Rw2G047820 Rw2G047840 Rw4G030890 Rw6G042770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 244
AccB1I GGYRCC 3 cut(s) 119, 152, 227
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccI GTMKAC 2 cut(s) 387, 786
AccII CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
AciI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
AclWI GGATC 2 cut(s) 253, 891
AcsI RAATTY 3 cut(s) 26, 910, 930
AcyI GRCGYC 3 cut(s) 120, 153, 228
AfaI GTAC 3 cut(s) 813, 845, 903
AfiI CCNNNNNNNGG 6 cut(s) 21, 328, 346, 445, 1030, 1148
AgsI TTSAA 2 cut(s) 130, 547
AhdI GACNNNNNGTC 1 cut(s) 106
AjnI CCWGG 2 cut(s) 345, 422
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
AleI CACNNNNGTG 1 cut(s) 447
AluBI AGCT 7 cut(s) 682, 709, 781, 858, 942, 972, 1210
AluI AGCT 7 cut(s) 682, 709, 781, 858, 942, 972, 1210
Alw21I GWGCWC 1 cut(s) 528
AlwI GGATC 2 cut(s) 253, 891
AlwNI CAGNNNCTG 1 cut(s) 1148
Ama87I CYCGRG 1 cut(s) 445
AoxI GGCC 6 cut(s) 90, 165, 205, 326, 331, 976
ApeKI GCWGC 4 cut(s) 499, 1100, 1180, 1210
ApoI RAATTY 3 cut(s) 26, 910, 930
Asp700I GAANNNNTTC 1 cut(s) 710
AspLEI GCGC 9 cut(s) 69, 107, 122, 155, 230, 278, 490, 532, 552
AspS9I GGNCC 7 cut(s) 166, 326, 331, 420, 436, 483, 688
AsuC2I CCSGG 2 cut(s) 204, 330
AsuHPI GGTGA 4 cut(s) 416, 502, 755, 932
AvaI CYCGRG 1 cut(s) 445
AvaII GGWCC 4 cut(s) 420, 436, 483, 688
AxyI CCTNAGG 1 cut(s) 1222
BanI GGYRCC 3 cut(s) 119, 152, 227
BanII GRGCYC 1 cut(s) 41
Bbv12I GWGCWC 1 cut(s) 528
BbvI GCAGC 4 cut(s) 486, 1112, 1167, 1197
BccI CCATC 4 cut(s) 257, 448, 1028, 1102
BceAI ACGGC 6 cut(s) 107, 118, 157, 164, 215, 1198
BcgI CGANNNNNNTGC 2 cut(s) 364, 398
BciT130I CCWGG 2 cut(s) 347, 424
BciVI GTATCC 1 cut(s) 1221
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 2 cut(s) 204, 330
BfaI CTAG 1 cut(s) 782
BfoI RGCGCY 3 cut(s) 123, 156, 231
BfuI GTATCC 1 cut(s) 1221
BglI GCCNNNNNGGC 1 cut(s) 626
BisI GCNGC 4 cut(s) 500, 1101, 1181, 1211
BlsI GCNGC 4 cut(s) 501, 1102, 1182, 1212
Bme1390I CCNGG 4 cut(s) 204, 330, 347, 424
Bme18I GGWCC 4 cut(s) 420, 436, 483, 688
BmeRI GACNNNNNGTC 1 cut(s) 106
BmeT110I CYCGRG 1 cut(s) 445
BmgT120I GGNCC 7 cut(s) 166, 326, 331, 420, 436, 483, 688
BmiI GGNNCC 8 cut(s) 38, 121, 154, 229, 338, 421, 437, 1128
BmrFI CCNGG 4 cut(s) 204, 330, 347, 424
BmrI ACTGGG 2 cut(s) 200, 1136
BmsI GCATC 4 cut(s) 663, 704, 978, 1143
BmuI ACTGGG 2 cut(s) 200, 1136
BpmI CTGGAG 1 cut(s) 329
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 2 cut(s) 204, 330
BsaBI GATNNNNATC 2 cut(s) 398, 571
BsaHI GRCGYC 3 cut(s) 120, 153, 228
BsaJI CCNNGG 3 cut(s) 322, 370, 665
BsaWI WCCGGW 3 cut(s) 21, 264, 299
BsaXI ACNNNNNCTCC 2 cut(s) 449, 479
Bsc4I CCNNNNNNNGG 6 cut(s) 21, 328, 346, 445, 1030, 1148
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 4 cut(s) 195, 897, 909, 1142
Bse21I CCTNAGG 1 cut(s) 1222
Bse8I GATNNNNATC 2 cut(s) 398, 571
BseBI CCWGG 2 cut(s) 347, 424
BseDI CCNNGG 3 cut(s) 322, 370, 665
BseGI GGATG 5 cut(s) 287, 695, 901, 1039, 1158
BseJI GATNNNNATC 2 cut(s) 398, 571
BseLI CCNNNNNNNGG 6 cut(s) 21, 328, 346, 445, 1030, 1148
BseMII CTCAG 2 cut(s) 1104, 1236
BseNI ACTGG 4 cut(s) 195, 897, 909, 1142
BseRI GAGGAG 1 cut(s) 332
BseXI GCAGC 4 cut(s) 486, 1112, 1167, 1197
Bsh1236I CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
Bsh1285I CGRYCG 2 cut(s) 15, 22
BshFI GGCC 6 cut(s) 92, 167, 207, 328, 333, 978
BshNI GGYRCC 3 cut(s) 119, 152, 227
BsiEI CGRYCG 2 cut(s) 15, 22
BsiHKAI GWGCWC 1 cut(s) 528
BsiHKCI CYCGRG 1 cut(s) 445
BslFI GGGAC 1 cut(s) 433
BslI CCNNNNNNNGG 6 cut(s) 21, 328, 346, 445, 1030, 1148
BsmFI GGGAC 1 cut(s) 433
BsnI GGCC 6 cut(s) 92, 167, 207, 328, 333, 978
BsoBI CYCGRG 1 cut(s) 445
Bsp1286I GDGCHC 2 cut(s) 41, 528
Bsp143I GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
BspACI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
BspANI GGCC 6 cut(s) 92, 167, 207, 328, 333, 978
BspCNI CTCAG 2 cut(s) 1103, 1235
BspFNI CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
BspLI GGNNCC 8 cut(s) 38, 121, 154, 229, 338, 421, 437, 1128
BspPI GGATC 2 cut(s) 253, 891
BspQI GCTCTTC 1 cut(s) 841
BspT107I GGYRCC 3 cut(s) 119, 152, 227
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 4 cut(s) 195, 897, 909, 1142
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 3 cut(s) 322, 370, 665
BssMI GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
BssNI GRCGYC 3 cut(s) 120, 153, 228
Bst2UI CCWGG 2 cut(s) 347, 424
Bst4CI ACNGT 2 cut(s) 669, 920
Bst6I CTCTTC 1 cut(s) 841
BstACI GRCGYC 3 cut(s) 120, 153, 228
BstC8I GCNNGC 3 cut(s) 94, 377, 528
BstDEI CTNAG 2 cut(s) 1090, 1222
BstDSI CCRYGG 2 cut(s) 322, 665
BstENI CCTNNNNNAGG 1 cut(s) 344
BstF5I GGATG 5 cut(s) 287, 695, 901, 1039, 1158
BstFNI CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
BstH2I RGCGCY 3 cut(s) 123, 156, 231
BstHHI GCGC 9 cut(s) 69, 107, 122, 155, 230, 278, 490, 532, 552
BstKTI GATC 7 cut(s) 219, 261, 396, 615, 886, 925, 1187
BstMBI GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
BstMCI CGRYCG 2 cut(s) 15, 22
BstMWI GCNNNNNNNGC 7 cut(s) 102, 496, 523, 617, 626, 1180, 1216
BstNI CCWGG 2 cut(s) 347, 424
BstNSI RCATGY 1 cut(s) 379
BstSCI CCNGG 4 cut(s) 202, 328, 345, 422
BstUI CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
BstV1I GCAGC 4 cut(s) 486, 1112, 1167, 1197
Bsu36I CCTNAGG 1 cut(s) 1222
BsuI GTATCC 1 cut(s) 1221
BsuRI GGCC 6 cut(s) 92, 167, 207, 328, 333, 978
BtgI CCRYGG 2 cut(s) 322, 665
BtsCI GGATG 5 cut(s) 287, 695, 901, 1039, 1158
BtsIMutI CAGTG 2 cut(s) 890, 1103
Cac8I GCNNGC 3 cut(s) 94, 377, 528
CaiI CAGNNNCTG 1 cut(s) 1148
CfoI GCGC 9 cut(s) 69, 107, 122, 155, 230, 278, 490, 532, 552
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 7 cut(s) 166, 326, 331, 420, 436, 483, 688
CseI GACGC 2 cut(s) 96, 343
CsiI ACCWGGT 1 cut(s) 422
Csp6I GTAC 3 cut(s) 812, 844, 902
CviAII CATG 6 cut(s) 163, 256, 376, 391, 799, 1234
CviQI GTAC 3 cut(s) 812, 844, 902
DdeI CTNAG 2 cut(s) 1090, 1222
DinI GGCGCC 3 cut(s) 121, 154, 229
DpnI GATC 7 cut(s) 218, 260, 395, 614, 885, 924, 1186
DpnII GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
DrdI GACNNNNNNGTC 1 cut(s) 244
DriI GACNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 244
Eam1104I CTCTTC 1 cut(s) 841
Eam1105I GACNNNNNGTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 841
EciI GGCGGA 2 cut(s) 49, 166
Eco24I GRGCYC 1 cut(s) 41
Eco47I GGWCC 4 cut(s) 420, 436, 483, 688
Eco81I CCTNAGG 1 cut(s) 1222
Eco88I CYCGRG 1 cut(s) 445
EcoNI CCTNNNNNAGG 1 cut(s) 344
EcoO109I RGGNCCY 1 cut(s) 420
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 2 cut(s) 345, 422
EcoT38I GRGCYC 1 cut(s) 41
EgeI GGCGCC 3 cut(s) 121, 154, 229
EheI GGCGCC 3 cut(s) 121, 154, 229
FaeI CATG 6 cut(s) 166, 259, 379, 394, 802, 1237
FaqI GGGAC 1 cut(s) 433
FatI CATG 6 cut(s) 162, 255, 375, 390, 798, 1233
FauI CCCGC 1 cut(s) 57
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 2 cut(s) 387, 786
Fnu4HI GCNGC 4 cut(s) 500, 1101, 1181, 1211
FokI GGATG 5 cut(s) 274, 682, 908, 1046, 1165
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 4 cut(s) 500, 1101, 1181, 1211
FspBI CTAG 1 cut(s) 782
GlaI GCGC 9 cut(s) 68, 106, 121, 154, 229, 277, 489, 531, 551
GluI GCNGC 4 cut(s) 500, 1101, 1181, 1211
GsuI CTGGAG 1 cut(s) 329
HaeII RGCGCY 3 cut(s) 123, 156, 231
HaeIII GGCC 6 cut(s) 92, 167, 207, 328, 333, 978
HgaI GACGC 2 cut(s) 96, 343
HhaI GCGC 9 cut(s) 69, 107, 122, 155, 230, 278, 490, 532, 552
Hin1I GRCGYC 3 cut(s) 120, 153, 228
Hin1II CATG 6 cut(s) 166, 259, 379, 394, 802, 1237
Hin6I GCGC 9 cut(s) 67, 105, 120, 153, 228, 276, 488, 530, 550
HinP1I GCGC 9 cut(s) 67, 105, 120, 153, 228, 276, 488, 530, 550
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 2 cut(s) 680, 707
HinfI GANTC 8 cut(s) 84, 159, 199, 242, 314, 492, 557, 1083
HphI GGTGA 4 cut(s) 416, 502, 755, 932
Hpy166II GTNNAC 8 cut(s) 270, 364, 388, 439, 483, 787, 844, 1166
Hpy188I TCNGA 1 cut(s) 12
Hpy188III TCNNGA 1 cut(s) 950
Hpy8I GTNNAC 8 cut(s) 270, 364, 388, 439, 483, 787, 844, 1166
Hpy99I CGWCG 7 cut(s) 74, 104, 112, 152, 359, 362, 386
HpyAV CCTTC 3 cut(s) 641, 1028, 1245
HpyCH4III ACNGT 2 cut(s) 669, 920
HpyCH4IV ACGT 1 cut(s) 846
HpyCH4V TGCA 1 cut(s) 1243
HpyF10VI GCNNNNNNNGC 7 cut(s) 102, 496, 523, 617, 626, 1180, 1216
HpyF3I CTNAG 2 cut(s) 1090, 1222
HpySE526I ACGT 1 cut(s) 846
Hsp92I GRCGYC 3 cut(s) 120, 153, 228
Hsp92II CATG 6 cut(s) 166, 259, 379, 394, 802, 1237
HspAI GCGC 9 cut(s) 67, 105, 120, 153, 228, 276, 488, 530, 550
KasI GGCGCC 3 cut(s) 119, 152, 227
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
LguI GCTCTTC 1 cut(s) 841
LmnI GCTCC 2 cut(s) 36, 1126
Lsp1109I GCAGC 4 cut(s) 486, 1112, 1167, 1197
LweI GCATC 4 cut(s) 663, 704, 978, 1143
MabI ACCWGGT 1 cut(s) 422
MaeI CTAG 1 cut(s) 782
MaeII ACGT 1 cut(s) 846
MaeIII GTNAC 3 cut(s) 54, 733, 1093
MalI GATC 7 cut(s) 218, 260, 395, 614, 885, 924, 1186
MboI GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
MboII GAAGA 3 cut(s) 828, 863, 1092
MfeI CAATTG 1 cut(s) 1002
MhlI GDGCHC 2 cut(s) 41, 528
MluCI AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1131, 1238
Mly113I GGCGCC 3 cut(s) 120, 153, 228
MlyI GAGTC 2 cut(s) 93, 308
MmeI TCCRAC 2 cut(s) 35, 637
MroNI GCCGGC 1 cut(s) 92
MroXI GAANNNNTTC 1 cut(s) 710
MseI TTAA 1 cut(s) 636
MslI CAYNNNNRTG 2 cut(s) 254, 447
MspA1I CMGCKG 2 cut(s) 52, 1210
MspR9I CCNGG 4 cut(s) 204, 330, 347, 424
MunI CAATTG 1 cut(s) 1002
MvaI CCWGG 2 cut(s) 347, 424
MvnI CGCG 7 cut(s) 69, 107, 276, 488, 490, 530, 552
MwoI GCNNNNNNNGC 7 cut(s) 102, 496, 523, 617, 626, 1180, 1216
NaeI GCCGGC 1 cut(s) 94
NarI GGCGCC 3 cut(s) 120, 153, 228
NciI CCSGG 2 cut(s) 204, 330
NdeII GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
NgoMIV GCCGGC 1 cut(s) 92
NlaIII CATG 6 cut(s) 166, 259, 379, 394, 802, 1237
NlaIV GGNNCC 8 cut(s) 38, 121, 154, 229, 338, 421, 437, 1128
NmeAIII GCCGAG 1 cut(s) 351
NspI RCATGY 1 cut(s) 379
OliI CACNNNNGTG 1 cut(s) 447
PaeI GCATGC 1 cut(s) 379
PciSI GCTCTTC 1 cut(s) 841
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PdiI GCCGGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 710
PfeI GAWTC 6 cut(s) 159, 199, 242, 492, 557, 1083
PflFI GACNNNGTC 1 cut(s) 424
PflMI CCANNNNNTGG 1 cut(s) 1148
PkrI GCNGC 4 cut(s) 501, 1102, 1182, 1212
PleI GAGTC 2 cut(s) 92, 308
PluTI GGCGCC 3 cut(s) 123, 156, 231
PpsI GAGTC 2 cut(s) 92, 308
PpuMI RGGWCCY 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 2 cut(s) 345, 422
PspGI CCWGG 2 cut(s) 345, 422
PspN4I GGNNCC 8 cut(s) 38, 121, 154, 229, 338, 421, 437, 1128
PspPI GGNCC 7 cut(s) 166, 326, 331, 420, 436, 483, 688
PspPPI RGGWCCY 1 cut(s) 420
PsrI GAACNNNNNNTAC 2 cut(s) 808, 840
PstNI CAGNNNCTG 1 cut(s) 1148
PsyI GACNNNGTC 1 cut(s) 424
PvuII CAGCTG 1 cut(s) 1210
RsaI GTAC 3 cut(s) 813, 845, 903
RsaNI GTAC 3 cut(s) 812, 844, 902
RseI CAYNNNNRTG 2 cut(s) 254, 447
SapI GCTCTTC 1 cut(s) 841
SaqAI TTAA 1 cut(s) 636
SatI GCNGC 4 cut(s) 500, 1101, 1181, 1211
Sau3AI GATC 7 cut(s) 216, 258, 393, 612, 883, 922, 1184
Sau96I GGNCC 7 cut(s) 166, 326, 331, 420, 436, 483, 688
SchI GAGTC 2 cut(s) 93, 308
ScrFI CCNGG 4 cut(s) 204, 330, 347, 424
SduI GDGCHC 2 cut(s) 41, 528
SexAI ACCWGGT 1 cut(s) 422
SfaNI GCATC 4 cut(s) 663, 704, 978, 1143
SfoI GGCGCC 3 cut(s) 121, 154, 229
SinI GGWCC 4 cut(s) 420, 436, 483, 688
SmiMI CAYNNNNRTG 2 cut(s) 254, 447
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
SphI GCATGC 1 cut(s) 379
Sse9I AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1131, 1238
SsiI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
SspDI GGCGCC 3 cut(s) 119, 152, 227
SspMI CTAG 1 cut(s) 782
StyD4I CCNGG 4 cut(s) 202, 328, 345, 422
TaaI ACNGT 2 cut(s) 669, 920
TaiI ACGT 1 cut(s) 849
TaqI TCGA 3 cut(s) 87, 99, 252
TaqII GACCGA 1 cut(s) 254
TasI AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1131, 1238
TatI WGTACW 1 cut(s) 901
TfiI GAWTC 6 cut(s) 159, 199, 242, 492, 557, 1083
Tru1I TTAA 1 cut(s) 636
Tru9I TTAA 1 cut(s) 636
TscAI CASTG 2 cut(s) 897, 1110
TseI GCWGC 4 cut(s) 499, 1100, 1180, 1210
TspDTI ATGAA 2 cut(s) 815, 1188
TspGWI ACGGA 2 cut(s) 311, 1179
TspRI CASTG 2 cut(s) 897, 1110
Tth111I GACNNNGTC 1 cut(s) 424
Van91I CCANNNNNTGG 1 cut(s) 1148
VpaK11BI GGWCC 4 cut(s) 420, 436, 483, 688
XagI CCTNNNNNAGG 1 cut(s) 344
XapI RAATTY 3 cut(s) 26, 910, 930
XceI RCATGY 1 cut(s) 379
XmiI GTMKAC 2 cut(s) 387, 786
XmnI GAANNNNTTC 1 cut(s) 710
XspI CTAG 1 cut(s) 782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.