Prupe.3G246600_v2.0.a1

sodium-coupled neutral amino acid transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
23778406 .. 23782431
4026 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G246600.2

Sequence Viewer

Length: 1383 bp
ATGACGATTGGAAATCTTGCACCAAAGAAGGAAAAGAAGTCACGAAAGAGCAAAGGAGTTATTGATGAGAATGCCCCCTTGTTGCCCAAAGGGCAAGAGGATGTTGTGTTTGATGAGTTTAATGGAGCTTCCTTTACTGGAGCAGTGTTCAATTTATCAACCACAATTGTTGGTGCTGGGATCATGGCTTTGCCTGCAACCATGAAAGTGTTGGGCCTTGTCCTTGGAATTTCCATGATCATCTTTATGGCCTTCTTGACCGAAGCTTCAATTGAACTGATACTTAGGTTCAGCCGAGCTGGGAAGTCTGCTTCTTATGGAGGTCTTATGGGGGAGGCCTTTGGAAAATATGGGAAGGTTTTGTTACAGATATCTGTTCTAGTCAACAACCTTGGCGTGCTCATTGTCTACATGATTATTATTGGTGATGTGCTTTCTGGAACATCTTCAAGTGGTGTTCACCATGCTGGTGTACTTGAAGGATGGTTTGGAGAACACTGGTGGACTGGGCGTGCCATTATTCTTCTTGTCACCACACTTGGCATATTTGCTCCATTGTCATGCTTTAAGCGAATCGATTCATTGAGCTTCACGTCTGCCTTATCAGTTGCACTAGCAGTTGTATTTCTTGTTATTACTGTTGGAATTACGGTCGTCAAGTTGTTCAATGGAAGCATTGCGATGCCCAGATTGTTACCTGATGTTACCGACGTTTCATCATTCTTCAAACTCTTCACTGTAGTCCCTGTTCTTGTCACTGCATACATTTGTCACTACAATGTCCACAGTATCCACAACGAACTTGAAGACTCGACGCAGATAAGAGGGGTTGTGCAAACCTCACTTGCTTTATGCTCATCTGTTTACATAATGACAAGCCTTTTTGGGTTCCTCCTATTTGGGGACGGAACTCTTGACGATGTGCTTGCCAACTTTGACACCAACCTTGGCATACCTTACAGTTCCGTGCTCAATGACGCTGTTCGTGTCAGCTATGCTGCTCACCTTATGCTTGTGTTTCCCATTGTCTTCTTCCCATTGCGGCTCAACTTGGATGGCCTCCTCTTTCCCTCTGCAAGGCCGTTGGTTCTGGATAATATGAGATTTGCACTGGTCACCATTGGGCTCATAAGTGTTATCTTCTTGGGTGCAAACTTCATCCCCAGCATCTGGGATGCTTTCCAGTTCACTGGAGCAACTGCTGCAGTTTGCCTTGGGTTCATTTTTCCTGCTGCAATTACTCTCAAGGATCGACACAACATAGCAACTAAGAAGGACAAGATCTTGAGTGTTTTTATGATTGTACTAGCTGTGTTCTCAAACGTGGTGGCCATATATAGTGATGCCTATGCTTTGTTCAAGAATTCATCACGGCGTGAATGA

Protein Analysis

461

Amino Acids

49.72

Weight (kDa)

8.24

Isoelectric Point (pI)

25.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000616)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1170
AccI GTMKAC 1 cut(s) 408
AciI CCGC 1 cut(s) 1042
AclWI GGATC 2 cut(s) 188, 1257
AcoI YGGCCR 1 cut(s) 1329
AcsI RAATTY 2 cut(s) 228, 1363
AdeI CACNNNGTG 1 cut(s) 1376
AfaI GTAC 2 cut(s) 474, 1305
AfiI CCNNNNNNNGG 3 cut(s) 901, 1077, 1170
AgsI TTSAA 9 cut(s) 151, 270, 275, 450, 479, 667, 727, 806, 1360
AjiI CACGTC 1 cut(s) 594
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AluBI AGCT 6 cut(s) 128, 266, 299, 588, 993, 1310
AluI AGCT 6 cut(s) 128, 266, 299, 588, 993, 1310
Alw21I GWGCWC 2 cut(s) 402, 972
AlwI GGATC 2 cut(s) 188, 1257
AlwNI CAGNNNCTG 1 cut(s) 1170
AoxI GGCC 6 cut(s) 214, 249, 336, 1057, 1079, 1329
ApeKI GCWGC 3 cut(s) 998, 1202, 1232
ApoI RAATTY 2 cut(s) 228, 1363
Asp700I GAANNNNTTC 2 cut(s) 445, 577
AspS9I GGNCC 1 cut(s) 214
AsuHPI GGTGA 5 cut(s) 437, 452, 523, 995, 1108
BaeI ACNNNNGTAYC 2 cut(s) 272, 305
BalI TGGCCA 1 cut(s) 1331
BanII GRGCYC 1 cut(s) 1128
BbsI GAAGAC 2 cut(s) 813, 1021
Bbv12I GWGCWC 2 cut(s) 402, 972
BbvI GCAGC 3 cut(s) 985, 1189, 1219
BccI CCATC 2 cut(s) 477, 1049
BceAI ACGGC 1 cut(s) 1066
BcgI CGANNNNNNTGC 2 cut(s) 908, 942
BciVI GTATCC 1 cut(s) 800
BclI TGATCA 1 cut(s) 237
BfaI CTAG 3 cut(s) 380, 614, 1307
BfmI CTRYAG 2 cut(s) 738, 1203
BfuI GTATCC 1 cut(s) 800
BglI GCCNNNNNGGC 1 cut(s) 91
BglII AGATCT 1 cut(s) 1281
BisI GCNGC 4 cut(s) 999, 1043, 1203, 1233
BlsI GCNGC 4 cut(s) 1000, 1044, 1204, 1234
BmgBI CACGTC 1 cut(s) 594
BmgT120I GGNCC 1 cut(s) 214
BmiI GGNNCC 1 cut(s) 890
BmrI ACTGGG 1 cut(s) 516
BmsI GCATC 4 cut(s) 672, 1165, 1176, 1333
BmuI ACTGGG 1 cut(s) 516
BpiI GAAGAC 2 cut(s) 813, 1021
BpmI CTGGAG 2 cut(s) 159, 1212
BpuEI CTTGAG 2 cut(s) 1229, 1306
Bsa29I ATCGAT 1 cut(s) 576
BsaJI CCNNGG 4 cut(s) 223, 391, 946, 1213
Bsc4I CCNNNNNNNGG 3 cut(s) 901, 1077, 1170
Bse1I ACTGG 6 cut(s) 142, 503, 511, 1116, 1183, 1195
Bse3DI GCAATG 2 cut(s) 675, 1037
BseCI ATCGAT 1 cut(s) 576
BseDI CCNNGG 4 cut(s) 223, 391, 946, 1213
BseGI GGATG 5 cut(s) 106, 488, 1060, 1158, 1180
BseLI CCNNNNNNNGG 3 cut(s) 901, 1077, 1170
BseMI GCAATG 2 cut(s) 675, 1037
BseNI ACTGG 6 cut(s) 142, 503, 511, 1116, 1183, 1195
BseRI GAGGAG 1 cut(s) 1052
BseXI GCAGC 3 cut(s) 985, 1189, 1219
BseYI CCCAGC 3 cut(s) 176, 299, 1163
Bsh1285I CGRYCG 1 cut(s) 654
BshFI GGCC 6 cut(s) 216, 251, 338, 1059, 1081, 1331
BshVI ATCGAT 1 cut(s) 576
BsiEI CGRYCG 1 cut(s) 654
BsiHKAI GWGCWC 2 cut(s) 402, 972
BslFI GGGAC 2 cut(s) 728, 917
BslI CCNNNNNNNGG 3 cut(s) 901, 1077, 1170
BsmFI GGGAC 2 cut(s) 728, 917
BsmI GAATGC 1 cut(s) 76
BsnI GGCC 6 cut(s) 216, 251, 338, 1059, 1081, 1331
Bsp1286I GDGCHC 3 cut(s) 402, 972, 1128
Bsp143I GATC 4 cut(s) 180, 237, 1249, 1281
BspACI CCGC 1 cut(s) 1042
BspANI GGCC 6 cut(s) 216, 251, 338, 1059, 1081, 1331
BspDI ATCGAT 1 cut(s) 576
BspLI GGNNCC 1 cut(s) 890
BspMAI CTGCAG 1 cut(s) 1207
BspPI GGATC 2 cut(s) 188, 1257
BsrDI GCAATG 2 cut(s) 675, 1037
BsrI ACTGG 6 cut(s) 142, 503, 511, 1116, 1183, 1195
BssECI CCNNGG 4 cut(s) 223, 391, 946, 1213
BssMI GATC 4 cut(s) 180, 237, 1249, 1281
BssT1I CCWWGG 4 cut(s) 223, 391, 946, 1213
Bst4CI ACNGT 5 cut(s) 640, 652, 739, 788, 962
Bst6I CTCTTC 1 cut(s) 737
BstAPI GCANNNNNTGC 1 cut(s) 1202
BstC8I GCNNGC 4 cut(s) 195, 398, 513, 927
BstDEI CTNAG 2 cut(s) 284, 1269
BstEII GGTNACC 1 cut(s) 1114
BstENI CCTNNNNNAGG 1 cut(s) 1075
BstF5I GGATG 5 cut(s) 106, 488, 1060, 1158, 1180
BstKTI GATC 4 cut(s) 183, 240, 1252, 1284
BstMBI GATC 4 cut(s) 180, 237, 1249, 1281
BstMCI CGRYCG 1 cut(s) 654
BstMWI GCNNNNNNNGC 3 cut(s) 91, 194, 1202
BstPI GGTNACC 1 cut(s) 1114
BstSFI CTRYAG 2 cut(s) 738, 1203
BstV1I GCAGC 3 cut(s) 985, 1189, 1219
BstV2I GAAGAC 2 cut(s) 813, 1021
BstX2I RGATCY 1 cut(s) 1281
BstXI CCANNNNNNTGG 1 cut(s) 1190
BstYI RGATCY 1 cut(s) 1281
Bsu15I ATCGAT 1 cut(s) 576
BsuI GTATCC 1 cut(s) 800
BsuRI GGCC 6 cut(s) 216, 251, 338, 1059, 1081, 1331
BsuTUI ATCGAT 1 cut(s) 576
BtgZI GCGATG 1 cut(s) 695
BtrI CACGTC 1 cut(s) 594
BtsCI GGATG 5 cut(s) 106, 488, 1060, 1158, 1180
BtsI GCAGTG 2 cut(s) 150, 756
BtsIMutI CAGTG 6 cut(s) 150, 496, 735, 756, 1109, 1188
Cac8I GCNNGC 4 cut(s) 195, 398, 513, 927
CaiI CAGNNNCTG 1 cut(s) 1170
Cfr13I GGNCC 1 cut(s) 214
ClaI ATCGAT 1 cut(s) 576
CseI GACGC 2 cut(s) 823, 986
Csp6I GTAC 2 cut(s) 473, 1304
CspCI CAANNNNNGTGG 4 cut(s) 151, 186, 1308, 1343
CviAII CATG 6 cut(s) 184, 202, 235, 412, 464, 561
CviQI GTAC 2 cut(s) 473, 1304
DdeI CTNAG 2 cut(s) 284, 1269
DpnI GATC 4 cut(s) 182, 239, 1251, 1283
DpnII GATC 4 cut(s) 180, 237, 1249, 1281
DraIII CACNNNGTG 1 cut(s) 1376
EaeI YGGCCR 1 cut(s) 1329
Eam1104I CTCTTC 1 cut(s) 737
EarI CTCTTC 1 cut(s) 737
Eco130I CCWWGG 4 cut(s) 223, 391, 946, 1213
Eco147I AGGCCT 1 cut(s) 338
Eco24I GRGCYC 1 cut(s) 1128
Eco32I GATATC 1 cut(s) 372
Eco91I GGTNACC 1 cut(s) 1114
EcoNI CCTNNNNNAGG 1 cut(s) 1075
EcoO65I GGTNACC 1 cut(s) 1114
EcoRI GAATTC 1 cut(s) 1363
EcoRV GATATC 1 cut(s) 372
EcoT14I CCWWGG 4 cut(s) 223, 391, 946, 1213
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 4 cut(s) 223, 391, 946, 1213
FaeI CATG 6 cut(s) 187, 205, 238, 415, 467, 564
FaqI GGGAC 2 cut(s) 728, 917
FatI CATG 6 cut(s) 183, 201, 234, 411, 463, 560
FbaI TGATCA 1 cut(s) 237
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 4 cut(s) 999, 1043, 1203, 1233
FokI GGATG 5 cut(s) 113, 495, 1067, 1145, 1187
FriOI GRGCYC 1 cut(s) 1128
Fsp4HI GCNGC 4 cut(s) 999, 1043, 1203, 1233
FspBI CTAG 3 cut(s) 380, 614, 1307
GluI GCNGC 4 cut(s) 999, 1043, 1203, 1233
GsaI CCCAGC 3 cut(s) 180, 303, 1167
GsuI CTGGAG 2 cut(s) 159, 1212
HaeIII GGCC 6 cut(s) 216, 251, 338, 1059, 1081, 1331
HgaI GACGC 2 cut(s) 823, 986
Hin1II CATG 6 cut(s) 187, 205, 238, 415, 467, 564
HincII GTYRAC 1 cut(s) 385
HindII GTYRAC 1 cut(s) 385
HindIII AAGCTT 1 cut(s) 264
HinfI GANTC 3 cut(s) 573, 578, 809
HphI GGTGA 5 cut(s) 437, 452, 523, 995, 1108
Hpy166II GTNNAC 8 cut(s) 385, 409, 460, 473, 504, 784, 865, 1188
Hpy188III TCNNGA 7 cut(s) 42, 256, 438, 914, 1091, 1285, 1360
Hpy8I GTNNAC 8 cut(s) 385, 409, 460, 473, 504, 784, 865, 1188
Hpy99I CGWCG 2 cut(s) 713, 817
HpyAV CCTTC 5 cut(s) 22, 262, 349, 473, 1267
HpyCH4III ACNGT 5 cut(s) 640, 652, 739, 788, 962
HpyCH4IV ACGT 3 cut(s) 593, 711, 1323
HpyF10VI GCNNNNNNNGC 3 cut(s) 91, 194, 1202
HpyF3I CTNAG 2 cut(s) 284, 1269
HpySE526I ACGT 3 cut(s) 593, 711, 1323
Hsp92II CATG 6 cut(s) 187, 205, 238, 415, 467, 564
Ksp22I TGATCA 1 cut(s) 237
Kzo9I GATC 4 cut(s) 180, 237, 1249, 1281
LmnI GCTCC 4 cut(s) 125, 140, 556, 1193
Lsp1109I GCAGC 3 cut(s) 985, 1189, 1219
LweI GCATC 4 cut(s) 672, 1165, 1176, 1333
MaeI CTAG 3 cut(s) 380, 614, 1307
MaeII ACGT 3 cut(s) 593, 711, 1323
MaeIII GTNAC 8 cut(s) 39, 363, 529, 693, 703, 754, 770, 1114
MalI GATC 4 cut(s) 182, 239, 1251, 1283
MboI GATC 4 cut(s) 180, 237, 1249, 1281
MboII GAAGA 8 cut(s) 438, 515, 715, 724, 818, 1021, 1024, 1132
MfeI CAATTG 2 cut(s) 165, 270
MflI RGATCY 1 cut(s) 1281
MhlI GDGCHC 3 cut(s) 402, 972, 1128
MlsI TGGCCA 1 cut(s) 1331
MluCI AATT 7 cut(s) 151, 165, 228, 270, 645, 1236, 1363
MluNI TGGCCA 1 cut(s) 1331
MlyI GAGTC 1 cut(s) 803
MmeI TCCRAC 1 cut(s) 622
MnlI CCTC 9 cut(s) 91, 314, 328, 818, 850, 902, 1070, 1073, 1081
Mox20I TGGCCA 1 cut(s) 1331
MroXI GAANNNNTTC 2 cut(s) 445, 577
MscI TGGCCA 1 cut(s) 1331
MseI TTAA 2 cut(s) 120, 567
MslI CAYNNNNRTG 6 cut(s) 206, 245, 468, 559, 680, 777
Msp20I TGGCCA 1 cut(s) 1331
MunI CAATTG 2 cut(s) 165, 270
Mva1269I GAATGC 1 cut(s) 76
MwoI GCNNNNNNNGC 3 cut(s) 91, 194, 1202
NdeII GATC 4 cut(s) 180, 237, 1249, 1281
NlaIII CATG 6 cut(s) 187, 205, 238, 415, 467, 564
NlaIV GGNNCC 1 cut(s) 890
NmeAIII GCCGAG 1 cut(s) 320
NmuCI GTSAC 5 cut(s) 39, 529, 754, 770, 1114
PceI AGGCCT 1 cut(s) 338
PctI GAATGC 1 cut(s) 76
PdmI GAANNNNTTC 2 cut(s) 445, 577
PfeI GAWTC 2 cut(s) 573, 578
PflMI CCANNNNNTGG 1 cut(s) 1170
PkrI GCNGC 4 cut(s) 1000, 1044, 1204, 1234
PleI GAGTC 1 cut(s) 803
PpsI GAGTC 1 cut(s) 803
PspEI GGTNACC 1 cut(s) 1114
PspFI CCCAGC 3 cut(s) 176, 299, 1163
PspN4I GGNNCC 1 cut(s) 890
PspPI GGNCC 1 cut(s) 214
PsrI GAACNNNNNNTAC 2 cut(s) 732, 764
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 1 cut(s) 1170
PsuI RGATCY 1 cut(s) 1281
RsaI GTAC 2 cut(s) 474, 1305
RsaNI GTAC 2 cut(s) 473, 1304
RseI CAYNNNNRTG 6 cut(s) 206, 245, 468, 559, 680, 777
SaqAI TTAA 2 cut(s) 120, 567
SatI GCNGC 4 cut(s) 999, 1043, 1203, 1233
Sau3AI GATC 4 cut(s) 180, 237, 1249, 1281
Sau96I GGNCC 1 cut(s) 214
SchI GAGTC 1 cut(s) 803
SduI GDGCHC 3 cut(s) 402, 972, 1128
SfaNI GCATC 4 cut(s) 672, 1165, 1176, 1333
SfcI CTRYAG 2 cut(s) 738, 1203
SmiMI CAYNNNNRTG 6 cut(s) 206, 245, 468, 559, 680, 777
SmlI CTYRAG 2 cut(s) 1244, 1285
SmoI CTYRAG 2 cut(s) 1244, 1285
Sse9I AATT 7 cut(s) 151, 165, 228, 270, 645, 1236, 1363
SseBI AGGCCT 1 cut(s) 338
SsiI CCGC 1 cut(s) 1042
SspMI CTAG 3 cut(s) 380, 614, 1307
StuI AGGCCT 1 cut(s) 338
StyI CCWWGG 4 cut(s) 223, 391, 946, 1213
TaaI ACNGT 5 cut(s) 640, 652, 739, 788, 962
TaiI ACGT 3 cut(s) 596, 714, 1326
TaqI TCGA 3 cut(s) 576, 812, 1252
TaqII GACCGA 1 cut(s) 275
TasI AATT 7 cut(s) 151, 165, 228, 270, 645, 1236, 1363
TatI WGTACW 2 cut(s) 472, 1303
TauI GCSGC 1 cut(s) 1045
TfiI GAWTC 2 cut(s) 573, 578
Tru1I TTAA 2 cut(s) 120, 567
Tru9I TTAA 2 cut(s) 120, 567
TscAI CASTG 6 cut(s) 150, 503, 742, 763, 1116, 1195
TseFI GTSAC 5 cut(s) 39, 529, 754, 770, 1114
TseI GCWGC 3 cut(s) 998, 1202, 1232
Tsp45I GTSAC 5 cut(s) 39, 529, 754, 770, 1114
TspDTI ATGAA 6 cut(s) 218, 570, 705, 1147, 1210, 1356
TspGWI ACGGA 2 cut(s) 921, 955
TspRI CASTG 6 cut(s) 150, 503, 742, 763, 1116, 1195
Van91I CCANNNNNTGG 1 cut(s) 1170
XagI CCTNNNNNAGG 1 cut(s) 1075
XapI RAATTY 2 cut(s) 228, 1363
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmiI GTMKAC 1 cut(s) 408
XmnI GAANNNNTTC 2 cut(s) 445, 577
XspI CTAG 3 cut(s) 380, 614, 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.