Rw6G042770

sodium-coupled neutral amino acid transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000616
Physical Location & Seq
Reverse (-)
66171546 .. 66174082
2537 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G042770.1

Sequence Viewer

Length: 1368 bp
ATGACAATTCCGACCGCCGACAGGAAATTCCGGCGGAGCCCCAAAGCCCCGCTGTTACCCCAAAAGCGCGACGACAATGAGCGCATCGAGGCCGGCTTCGACGGAGCGTCGTTCTCCGGCGCCATGTTCAACCTCTCCACCACAATCGTCGGCGCCGGAATCATGGCCCTGCCGTCCGCCGTCAAGCAACTGGGGTTGATTCCCGGCCTAATTATGATCGTATTGGGCGCCGTGCTGACCGAATCGTCCATCGACATGATCCTCCGGTTCACACGCGCCTCCAAGACATCCTCGTATTCCGGTCTGGTCGGCGACTCGTTCGGTGGGCCCGGCCGGAACCTGCTCCAGGTCTGCGTCGTCGTCAACAACCTCGGCATGCTCGTCGTCTACATGATCATCATCGGTGATGTGCTGTCGGGGACCTGGTCGGGTGGGGTCCACCACTCGGGTGTGATGGAGGAATGGTTTGGTCAGCGTTGGTGGACCGCACGATTCTCGCTGCTACTTTTCACCACGCTATCTGTGCTCGCGCCTCTTATTTCTTTCAAGCGCGTGGATTCGTTGAGATACACATCGGCATTGTCAGTTGGTTTGGCGGTTGTGTTTGTGGCGATCATAGCCGGAGTGGCGATAGTTAAGTTGATAGAAGGAGGGGTTGGATTTCCACGGTTGATGCCGAAACTTGAGGACCAAGCATCCTTTTGGAAGCTTTTCACTACCATTCCCATTCTTGTTACTGCCTATATCTGCCACCATAACATTCACCCTATTGAGAACGAGCTAGTAGACCCTAACCAGATGAGGTCAATAGTACGAACATCACTTACATTTTGCTCATCTGTGTACGTTGCGACCAGCTTCTTTGGTGTTCTTCTCTTTGGGGATCAAACACTGGATGATGTACTGGCAAATTTTGATGGTGATCTTGGAATTCCATATAGCTCATTTCTTGATGATATTGTTAGAGTGAGCTATGGCCTCCACCTTATGCTTGTTTTCCCAATTGTATTTTTCTCCCTTCGCCTTAATTTGGACGGGCTTCTCTTTCCCTATGCCATTCCTATTGCCTTTGACAACCGAAGATTCTACTCAGTAACAGCAGCACTGATGGGTTTTATCTTTTCGGGAGCCAATTTTATTCCCAGTATCTGGGATGCCTTTCAGTTCACAGGTGCTACTGCTGCGATCTCGGTTGGTTTCATATTTCCAGCTGCCGTTGCCCTCAGGGATGCTCATGGAATTGCAACAAAGAAGGACAGACTAATATCATGGGTGATGATCCTTTTAGCAGTCTCTTCCAGCACAGTGGCCATCTCTAGTGACATTTACAGCTTTTTTTGTAGTAACAAAGGAGGAGCTCGAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04724 ko04727 ko04974 map04724 map04727 map04974
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

455

Amino Acids

49.51

Weight (kDa)

8.29

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 36 - 427 4.3e-53 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 37 - 264 8.9e-10 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000616)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30390 AT3G30390 AT3G30390 AT5G38820 AT5G38820 AT5G38820
fragaria_vesca FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_4g28960 FvH4_6g46060 FvH4_6g46060 FvH4_6g46080
malus_domestica MD09G1077200.v1.1 MD09G1077400.v1.1 MD15G1064300.v1.1 MD16G1053900.v1.1 MD17G1067600.v1.1 MD17G1067800.v1.1
prunus_persica Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G418300_v2.0.a1 Prupe.3G246600_v2.0.a1 Prupe.3G246800_v2.0.a1 Prupe.3G246900_v2.0.a1
pyrus_communis pycom09g00430 pycom09g00450 pycom15g06100 pycom16g04690 pycom17g06820
rosa_chinensis RchiOBHm_Chr2g0164381 RchiOBHm_Chr2g0164401 RchiOBHm_Chr4g0437101 RchiOBHm_Chr6g0310121
rosa_laevigata RLG00000006468 RLG00000010508 RLG00000021456 RLG00000021458
rosa_multiflora Rmu_co8348867.1_g000001 Rmu_sc0000294.1_g000029 Rmu_sc0009487.1_g000003 Rmu_sc0018759.1_g000001 Rmu_sc0021401.1_g000003 Rmu_ssc0000006.1_g000009
rosa_roxburghii Rroxscaffold_2G00086590 Rroxscaffold_2G00086610 Rroxscaffold_5G00378170 Rroxscaffold_7G00158840
rosa_rugosa Rorug02G0508200 Rorug02G0508300 Rorug04G0298000 Rorug06G0377600
rosa_samantha Rh2AG576200 Rh2AG576400 Rh2BG587200 Rh2BG587400 Rh2CG558000 Rh2CG558200 Rh2DG596900 Rh2DG597200 Rh4AG352800 Rh4BG362300 Rh4CG376500 Rh4DG356300 Rh6AG491600 Rh6BG501000 Rh6CG506000 Rh6DG492100
rosa_wichuraiana Rw2G047720 Rw2G047740 Rw2G047820 Rw2G047840 Rw4G030890 Rw6G042770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 244
Acc36I ACCTGC 1 cut(s) 348
AccB1I GGYRCC 3 cut(s) 119, 152, 227
AccB7I CCANNNNNTGG 1 cut(s) 1149
AccI GTMKAC 2 cut(s) 387, 786
AccII CGCG 4 cut(s) 69, 276, 530, 552
AciI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
AclWI GGATC 3 cut(s) 253, 891, 1273
AcoI YGGCCR 2 cut(s) 331, 1308
AcsI RAATTY 3 cut(s) 26, 910, 930
AcyI GRCGYC 3 cut(s) 120, 153, 228
AfaI GTAC 3 cut(s) 813, 845, 903
AfiI CCNNNNNNNGG 5 cut(s) 21, 346, 445, 1030, 1149
AgsI TTSAA 2 cut(s) 130, 547
AhdI GACNNNNNGTC 1 cut(s) 106
AjnI CCWGG 2 cut(s) 345, 422
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
AleI CACNNNNGTG 1 cut(s) 447
AluBI AGCT 8 cut(s) 709, 781, 858, 942, 972, 1211, 1332, 1358
AluI AGCT 8 cut(s) 709, 781, 858, 942, 972, 1211, 1332, 1358
Alw21I GWGCWC 2 cut(s) 528, 1360
Alw26I GTCTC 1 cut(s) 1297
AlwI GGATC 3 cut(s) 253, 891, 1273
AlwNI CAGNNNCTG 1 cut(s) 1149
Ama87I CYCGRG 1 cut(s) 445
AoxI GGCC 7 cut(s) 90, 165, 205, 326, 331, 976, 1308
ApaI GGGCCC 1 cut(s) 330
ApeKI GCWGC 4 cut(s) 499, 1100, 1181, 1211
ApoI RAATTY 3 cut(s) 26, 910, 930
Asp700I GAANNNNTTC 1 cut(s) 710
AspLEI GCGC 8 cut(s) 69, 84, 122, 155, 230, 278, 532, 552
AspS9I GGNCC 7 cut(s) 166, 326, 327, 420, 436, 483, 688
AsuC2I CCSGG 2 cut(s) 204, 330
AsuHPI GGTGA 5 cut(s) 416, 502, 755, 932, 1285
AvaI CYCGRG 1 cut(s) 445
AvaII GGWCC 4 cut(s) 420, 436, 483, 688
AxyI CCTNAGG 1 cut(s) 1223
BaeGI GKGCMC 1 cut(s) 330
BalI TGGCCA 1 cut(s) 1310
BanI GGYRCC 3 cut(s) 119, 152, 227
BanII GRGCYC 3 cut(s) 41, 330, 1360
Bbv12I GWGCWC 2 cut(s) 528, 1360
BbvI GCAGC 4 cut(s) 486, 1112, 1168, 1198
BccI CCATC 5 cut(s) 257, 448, 911, 1102, 1319
BceAI ACGGC 4 cut(s) 157, 164, 215, 1199
BcgI CGANNNNNNTGC 4 cut(s) 364, 398, 477, 511
BciT130I CCWGG 2 cut(s) 347, 424
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 2 cut(s) 204, 330
BcoDI GTCTC 1 cut(s) 1297
BfaI CTAG 2 cut(s) 782, 1317
BfoI RGCGCY 3 cut(s) 123, 156, 231
BfuAI ACCTGC 1 cut(s) 348
BglI GCCNNNNNGGC 1 cut(s) 626
BisI GCNGC 4 cut(s) 500, 1101, 1182, 1212
BlsI GCNGC 4 cut(s) 501, 1102, 1183, 1213
Bme1390I CCNGG 4 cut(s) 204, 330, 347, 424
Bme18I GGWCC 4 cut(s) 420, 436, 483, 688
BmeRI GACNNNNNGTC 1 cut(s) 106
BmeT110I CYCGRG 1 cut(s) 445
BmgT120I GGNCC 7 cut(s) 166, 326, 327, 420, 436, 483, 688
BmiI GGNNCC 9 cut(s) 38, 121, 154, 229, 328, 338, 421, 437, 1129
BmrFI CCNGG 4 cut(s) 204, 330, 347, 424
BmrI ACTGGG 2 cut(s) 200, 1137
BmsI GCATC 5 cut(s) 93, 663, 704, 1144, 1219
BmuI ACTGGG 2 cut(s) 200, 1137
BpmI CTGGAG 1 cut(s) 329
BpuEI CTTGAG 1 cut(s) 704
BpuMI CCSGG 2 cut(s) 204, 330
BsaBI GATNNNNATC 3 cut(s) 398, 571, 921
BsaHI GRCGYC 3 cut(s) 120, 153, 228
BsaJI CCNNGG 2 cut(s) 370, 665
BsaWI WCCGGW 2 cut(s) 264, 299
BsaXI ACNNNNNCTCC 2 cut(s) 449, 479
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 346, 445, 1030, 1149
Bse118I RCCGGY 1 cut(s) 92
Bse1I ACTGG 4 cut(s) 195, 897, 909, 1143
Bse21I CCTNAGG 1 cut(s) 1223
Bse8I GATNNNNATC 3 cut(s) 398, 571, 921
BseBI CCWGG 2 cut(s) 347, 424
BseDI CCNNGG 2 cut(s) 370, 665
BseGI GGATG 5 cut(s) 287, 695, 901, 1159, 1234
BseJI GATNNNNATC 3 cut(s) 398, 571, 921
BseLI CCNNNNNNNGG 5 cut(s) 21, 346, 445, 1030, 1149
BseMII CTCAG 2 cut(s) 1104, 1237
BseNI ACTGG 4 cut(s) 195, 897, 909, 1143
BseRI GAGGAG 1 cut(s) 1368
BseSI GKGCMC 1 cut(s) 330
BseX3I CGGCCG 1 cut(s) 331
BseXI GCAGC 4 cut(s) 486, 1112, 1168, 1198
Bsh1236I CGCG 4 cut(s) 69, 276, 530, 552
Bsh1285I CGRYCG 2 cut(s) 15, 334
BshFI GGCC 7 cut(s) 92, 167, 207, 328, 333, 978, 1310
BshNI GGYRCC 3 cut(s) 119, 152, 227
BsiEI CGRYCG 2 cut(s) 15, 334
BsiHKAI GWGCWC 2 cut(s) 528, 1360
BsiHKCI CYCGRG 1 cut(s) 445
BslFI GGGAC 1 cut(s) 433
BslI CCNNNNNNNGG 5 cut(s) 21, 346, 445, 1030, 1149
BsmAI GTCTC 1 cut(s) 1297
BsmFI GGGAC 1 cut(s) 433
BsnI GGCC 7 cut(s) 92, 167, 207, 328, 333, 978, 1310
BsoBI CYCGRG 1 cut(s) 445
Bsp120I GGGCCC 1 cut(s) 326
Bsp1286I GDGCHC 4 cut(s) 41, 330, 528, 1360
Bsp143I GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
BspACI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
BspANI GGCC 7 cut(s) 92, 167, 207, 328, 333, 978, 1310
BspCNI CTCAG 2 cut(s) 1103, 1236
BspFNI CGCG 4 cut(s) 69, 276, 530, 552
BspLI GGNNCC 9 cut(s) 38, 121, 154, 229, 328, 338, 421, 437, 1129
BspMI ACCTGC 1 cut(s) 348
BspPI GGATC 3 cut(s) 253, 891, 1273
BspT107I GGYRCC 3 cut(s) 119, 152, 227
BsrFI RCCGGY 1 cut(s) 92
BsrI ACTGG 4 cut(s) 195, 897, 909, 1143
BssAI RCCGGY 1 cut(s) 92
BssECI CCNNGG 2 cut(s) 370, 665
BssMI GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
BssNI GRCGYC 3 cut(s) 120, 153, 228
Bst2UI CCWGG 2 cut(s) 347, 424
Bst4CI ACNGT 2 cut(s) 669, 1306
Bst6I CTCTTC 1 cut(s) 1300
BstACI GRCGYC 3 cut(s) 120, 153, 228
BstC8I GCNNGC 3 cut(s) 94, 377, 528
BstDEI CTNAG 2 cut(s) 1090, 1223
BstDSI CCRYGG 1 cut(s) 665
BstENI CCTNNNNNAGG 1 cut(s) 344
BstF5I GGATG 5 cut(s) 287, 695, 901, 1159, 1234
BstFNI CGCG 4 cut(s) 69, 276, 530, 552
BstH2I RGCGCY 3 cut(s) 123, 156, 231
BstHHI GCGC 8 cut(s) 69, 84, 122, 155, 230, 278, 532, 552
BstKTI GATC 8 cut(s) 219, 261, 396, 615, 886, 925, 1188, 1281
BstMAI GTCTC 1 cut(s) 1297
BstMBI GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
BstMCI CGRYCG 2 cut(s) 15, 334
BstMWI GCNNNNNNNGC 5 cut(s) 523, 617, 626, 1181, 1217
BstNI CCWGG 2 cut(s) 347, 424
BstNSI RCATGY 1 cut(s) 379
BstSCI CCNGG 4 cut(s) 202, 328, 345, 422
BstSLI GKGCMC 1 cut(s) 330
BstUI CGCG 4 cut(s) 69, 276, 530, 552
BstV1I GCAGC 4 cut(s) 486, 1112, 1168, 1198
BstXI CCANNNNNNTGG 1 cut(s) 1306
BstZI CGGCCG 1 cut(s) 331
Bsu36I CCTNAGG 1 cut(s) 1223
BsuRI GGCC 7 cut(s) 92, 167, 207, 328, 333, 978, 1310
BtgI CCRYGG 1 cut(s) 665
BtsCI GGATG 5 cut(s) 287, 695, 901, 1159, 1234
BtsIMutI CAGTG 3 cut(s) 890, 1103, 1311
BveI ACCTGC 1 cut(s) 348
Cac8I GCNNGC 3 cut(s) 94, 377, 528
CaiI CAGNNNCTG 1 cut(s) 1149
CfoI GCGC 8 cut(s) 69, 84, 122, 155, 230, 278, 532, 552
Cfr10I RCCGGY 1 cut(s) 92
Cfr13I GGNCC 7 cut(s) 166, 326, 327, 420, 436, 483, 688
CseI GACGC 2 cut(s) 96, 343
CsiI ACCWGGT 1 cut(s) 422
Csp6I GTAC 3 cut(s) 812, 844, 902
CviAII CATG 7 cut(s) 124, 163, 256, 376, 391, 1235, 1269
CviQI GTAC 3 cut(s) 812, 844, 902
DdeI CTNAG 2 cut(s) 1090, 1223
DinI GGCGCC 3 cut(s) 121, 154, 229
DpnI GATC 8 cut(s) 218, 260, 395, 614, 885, 924, 1187, 1280
DpnII GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
DrdI GACNNNNNNGTC 1 cut(s) 244
DriI GACNNNNNGTC 1 cut(s) 106
DseDI GACNNNNNNGTC 1 cut(s) 244
EaeI YGGCCR 2 cut(s) 331, 1308
EagI CGGCCG 1 cut(s) 331
Eam1104I CTCTTC 1 cut(s) 1300
Eam1105I GACNNNNNGTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 1300
EciI GGCGGA 2 cut(s) 49, 166
Ecl136II GAGCTC 1 cut(s) 1358
EclXI CGGCCG 1 cut(s) 331
Eco24I GRGCYC 3 cut(s) 41, 330, 1360
Eco47I GGWCC 4 cut(s) 420, 436, 483, 688
Eco52I CGGCCG 1 cut(s) 331
Eco53kI GAGCTC 1 cut(s) 1358
Eco81I CCTNAGG 1 cut(s) 1223
Eco88I CYCGRG 1 cut(s) 445
EcoICRI GAGCTC 1 cut(s) 1358
EcoNI CCTNNNNNAGG 1 cut(s) 344
EcoO109I RGGNCCY 1 cut(s) 420
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 2 cut(s) 345, 422
EcoT38I GRGCYC 3 cut(s) 41, 330, 1360
EgeI GGCGCC 3 cut(s) 121, 154, 229
EheI GGCGCC 3 cut(s) 121, 154, 229
FaeI CATG 7 cut(s) 127, 166, 259, 379, 394, 1238, 1272
FaqI GGGAC 1 cut(s) 433
FatI CATG 7 cut(s) 123, 162, 255, 375, 390, 1234, 1268
FauI CCCGC 1 cut(s) 57
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 2 cut(s) 387, 786
Fnu4HI GCNGC 4 cut(s) 500, 1101, 1182, 1212
FokI GGATG 5 cut(s) 274, 682, 908, 1166, 1241
FriOI GRGCYC 3 cut(s) 41, 330, 1360
Fsp4HI GCNGC 4 cut(s) 500, 1101, 1182, 1212
FspBI CTAG 2 cut(s) 782, 1317
GlaI GCGC 8 cut(s) 68, 83, 121, 154, 229, 277, 531, 551
GluI GCNGC 4 cut(s) 500, 1101, 1182, 1212
GsuI CTGGAG 1 cut(s) 329
HaeII RGCGCY 3 cut(s) 123, 156, 231
HaeIII GGCC 7 cut(s) 92, 167, 207, 328, 333, 978, 1310
HgaI GACGC 2 cut(s) 96, 343
HhaI GCGC 8 cut(s) 69, 84, 122, 155, 230, 278, 532, 552
Hin1I GRCGYC 3 cut(s) 120, 153, 228
Hin1II CATG 7 cut(s) 127, 166, 259, 379, 394, 1238, 1272
Hin6I GCGC 8 cut(s) 67, 82, 120, 153, 228, 276, 530, 550
HinP1I GCGC 8 cut(s) 67, 82, 120, 153, 228, 276, 530, 550
HincII GTYRAC 1 cut(s) 364
HindII GTYRAC 1 cut(s) 364
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 8 cut(s) 159, 199, 242, 314, 492, 557, 1083, 1362
HphI GGTGA 5 cut(s) 416, 502, 755, 932, 1285
Hpy166II GTNNAC 8 cut(s) 270, 364, 388, 439, 483, 787, 844, 1167
Hpy188I TCNGA 2 cut(s) 12, 1367
Hpy188III TCNNGA 2 cut(s) 950, 1125
Hpy8I GTNNAC 8 cut(s) 270, 364, 388, 439, 483, 787, 844, 1167
Hpy99I CGWCG 7 cut(s) 74, 104, 112, 152, 359, 362, 386
HpyAV CCTTC 3 cut(s) 641, 1028, 1246
HpyCH4III ACNGT 2 cut(s) 669, 1306
HpyCH4IV ACGT 1 cut(s) 846
HpyCH4V TGCA 1 cut(s) 1244
HpyF10VI GCNNNNNNNGC 5 cut(s) 523, 617, 626, 1181, 1217
HpyF3I CTNAG 2 cut(s) 1090, 1223
HpySE526I ACGT 1 cut(s) 846
Hsp92I GRCGYC 3 cut(s) 120, 153, 228
Hsp92II CATG 7 cut(s) 127, 166, 259, 379, 394, 1238, 1272
HspAI GCGC 8 cut(s) 67, 82, 120, 153, 228, 276, 530, 550
KasI GGCGCC 3 cut(s) 119, 152, 227
KroI GCCGGC 1 cut(s) 92
KroNI GCCGGC 1 cut(s) 94
Ksp22I TGATCA 1 cut(s) 393
Kzo9I GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
LmnI GCTCC 5 cut(s) 36, 104, 348, 1127, 1355
Lsp1109I GCAGC 4 cut(s) 486, 1112, 1168, 1198
LweI GCATC 5 cut(s) 93, 663, 704, 1144, 1219
MabI ACCWGGT 1 cut(s) 422
MaeI CTAG 2 cut(s) 782, 1317
MaeII ACGT 1 cut(s) 846
MaeIII GTNAC 5 cut(s) 54, 733, 1093, 1319, 1343
MalI GATC 8 cut(s) 218, 260, 395, 614, 885, 924, 1187, 1280
MboI GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
MboII GAAGA 3 cut(s) 863, 1092, 1287
MfeI CAATTG 1 cut(s) 1002
MhlI GDGCHC 4 cut(s) 41, 330, 528, 1360
MlsI TGGCCA 1 cut(s) 1310
MluCI AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1132, 1239
MluNI TGGCCA 1 cut(s) 1310
Mly113I GGCGCC 3 cut(s) 120, 153, 228
MlyI GAGTC 1 cut(s) 308
MmeI TCCRAC 2 cut(s) 35, 637
Mox20I TGGCCA 1 cut(s) 1310
MroNI GCCGGC 1 cut(s) 92
MroXI GAANNNNTTC 1 cut(s) 710
MscI TGGCCA 1 cut(s) 1310
MseI TTAA 2 cut(s) 636, 1026
MslI CAYNNNNRTG 2 cut(s) 254, 447
Msp20I TGGCCA 1 cut(s) 1310
MspA1I CMGCKG 2 cut(s) 52, 1211
MspR9I CCNGG 4 cut(s) 204, 330, 347, 424
MunI CAATTG 1 cut(s) 1002
MvaI CCWGG 2 cut(s) 347, 424
MvnI CGCG 4 cut(s) 69, 276, 530, 552
MwoI GCNNNNNNNGC 5 cut(s) 523, 617, 626, 1181, 1217
NaeI GCCGGC 1 cut(s) 94
NarI GGCGCC 3 cut(s) 120, 153, 228
NciI CCSGG 2 cut(s) 204, 330
NdeII GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
NgoMIV GCCGGC 1 cut(s) 92
NlaIII CATG 7 cut(s) 127, 166, 259, 379, 394, 1238, 1272
NlaIV GGNNCC 9 cut(s) 38, 121, 154, 229, 328, 338, 421, 437, 1129
NmeAIII GCCGAG 1 cut(s) 351
NmuCI GTSAC 1 cut(s) 1319
NspI RCATGY 1 cut(s) 379
OliI CACNNNNGTG 1 cut(s) 447
PaeI GCATGC 1 cut(s) 379
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PdiI GCCGGC 1 cut(s) 94
PdmI GAANNNNTTC 1 cut(s) 710
PfeI GAWTC 7 cut(s) 159, 199, 242, 492, 557, 1083, 1362
PflFI GACNNNGTC 1 cut(s) 424
PflMI CCANNNNNTGG 1 cut(s) 1149
PkrI GCNGC 4 cut(s) 501, 1102, 1183, 1213
PleI GAGTC 1 cut(s) 308
PluTI GGCGCC 3 cut(s) 123, 156, 231
PpsI GAGTC 1 cut(s) 308
PpuMI RGGWCCY 1 cut(s) 420
Psp124BI GAGCTC 1 cut(s) 1360
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 2 cut(s) 345, 422
PspGI CCWGG 2 cut(s) 345, 422
PspN4I GGNNCC 9 cut(s) 38, 121, 154, 229, 328, 338, 421, 437, 1129
PspOMI GGGCCC 1 cut(s) 326
PspPI GGNCC 7 cut(s) 166, 326, 327, 420, 436, 483, 688
PspPPI RGGWCCY 1 cut(s) 420
PsrI GAACNNNNNNTAC 2 cut(s) 808, 840
PstNI CAGNNNCTG 1 cut(s) 1149
PsyI GACNNNGTC 1 cut(s) 424
PvuII CAGCTG 1 cut(s) 1211
RsaI GTAC 3 cut(s) 813, 845, 903
RsaNI GTAC 3 cut(s) 812, 844, 902
RseI CAYNNNNRTG 2 cut(s) 254, 447
SacI GAGCTC 1 cut(s) 1360
SaqAI TTAA 2 cut(s) 636, 1026
SatI GCNGC 4 cut(s) 500, 1101, 1182, 1212
Sau3AI GATC 8 cut(s) 216, 258, 393, 612, 883, 922, 1185, 1278
Sau96I GGNCC 7 cut(s) 166, 326, 327, 420, 436, 483, 688
SchI GAGTC 1 cut(s) 308
ScrFI CCNGG 4 cut(s) 204, 330, 347, 424
SduI GDGCHC 4 cut(s) 41, 330, 528, 1360
SexAI ACCWGGT 1 cut(s) 422
SfaNI GCATC 5 cut(s) 93, 663, 704, 1144, 1219
SfoI GGCGCC 3 cut(s) 121, 154, 229
SinI GGWCC 4 cut(s) 420, 436, 483, 688
SmiMI CAYNNNNRTG 2 cut(s) 254, 447
SmlI CTYRAG 1 cut(s) 683
SmoI CTYRAG 1 cut(s) 683
SphI GCATGC 1 cut(s) 379
Sse9I AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1132, 1239
SsiI CCGC 6 cut(s) 15, 34, 50, 177, 486, 596
SspDI GGCGCC 3 cut(s) 119, 152, 227
SspMI CTAG 2 cut(s) 782, 1317
SstI GAGCTC 1 cut(s) 1360
StyD4I CCNGG 4 cut(s) 202, 328, 345, 422
TaaI ACNGT 2 cut(s) 669, 1306
TaiI ACGT 1 cut(s) 849
TaqI TCGA 4 cut(s) 87, 99, 252, 1360
TaqII GACCGA 1 cut(s) 254
TasI AATT 9 cut(s) 6, 26, 210, 910, 930, 1002, 1027, 1132, 1239
TatI WGTACW 1 cut(s) 901
TfiI GAWTC 7 cut(s) 159, 199, 242, 492, 557, 1083, 1362
Tru1I TTAA 2 cut(s) 636, 1026
Tru9I TTAA 2 cut(s) 636, 1026
TscAI CASTG 3 cut(s) 897, 1110, 1311
TseFI GTSAC 1 cut(s) 1319
TseI GCWGC 4 cut(s) 499, 1100, 1181, 1211
Tsp45I GTSAC 1 cut(s) 1319
TspDTI ATGAA 1 cut(s) 1189
TspGWI ACGGA 1 cut(s) 117
TspRI CASTG 3 cut(s) 897, 1110, 1311
Tth111I GACNNNGTC 1 cut(s) 424
Van91I CCANNNNNTGG 1 cut(s) 1149
VpaK11BI GGWCC 4 cut(s) 420, 436, 483, 688
XagI CCTNNNNNAGG 1 cut(s) 344
XapI RAATTY 3 cut(s) 26, 910, 930
XceI RCATGY 1 cut(s) 379
XmiI GTMKAC 2 cut(s) 387, 786
XmnI GAANNNNTTC 1 cut(s) 710
XspI CTAG 2 cut(s) 782, 1317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.