Prupe.1G295800_v2.0.a1

sodium-coupled neutral amino acid transporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
29247028 .. 29249995
2968 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G295800.1

Sequence Viewer

Length: 1449 bp
ATGAAAGTGAAAGCAAGAGAAGAAGAGAAACTCTCACTCACTGTAAACCAGCAAGAAAAGAAAACAATGACCACTGACAGCAAGCAAACCAAGAACCCAAGAAAATGCAAGCAACCCATTAACGAGGAATCTCCACTGCTGCCAAATCAGAGGGGCTGCGATGAGCAGGCAGTGCAGGAATTCAATGGTGCATCTTTTGCTGGTGCAGTGTTTAATCTGTCAACGACCATTATTGGTGCTGGGATTATGGCGTTGCCTGCCACCATGAAAGTGCTGGGTCTTGGCGTTGGGATTGGTATGATCATTTTTGTTGCGATTTTGACACAGGCCTCCGTGGAGATGTTGTTGAGGTTCAGCAAAGTGGGAAAGGTTGTGTCTTTCGGAGGGGTTATGGGGGATGCCTTTGGGAAAGCTGGGAAGGTTGTGTTTCAGTTGTGTATCTTGGTGAACAATCTTGGAACGCTCATTGTCTACACGATCATCATTGGTGATGTGCTGTCTGGAACTTCTTCAACTGGAGTTCACCATGCTGGAGTATTGGAAGGGTGGTTTGGTGAACACTGGTGGAACGGGCGTACCTTCGTGCTGCTTGTCACAACCATTTTTGTATTTGCTCCTTTGGCATCCTTAAAGAGAATAGATTCATTGAGATATACATCGGCCTTAGCAGTTGCGCTGGCAGTTGTTTTTCTAGTTATTACTGCAGGAATCGTAGTTATTAAATTCTTTTACGGAGGTATTTCCATGCCCAGGTTCCTTCCTAATGTGTCTAATATTGCATCGGTGTGGAATCTCTTCACAGTTGTTCCTGTTCTTGTGACAGCCTTCATCTGCCACTTCAACGTGCATACAATCGGCAATGAGCTTGAGGACTCTTCCTTGATTCAACCAATTGTGCAGACATCATTGGCTTTGTGCTCTTCCGTCTACATACTGACCAGCCTTTTCGGGTTCCTCCTATTTGGGGACTCAACTCATGATGATGTGCTAGCCAACTTTGACACCAACCTTGGCATCCCTTATAGCTATTTGCTCAATGATATTGTTCGCATCAGTTATGCCCTGCACCTCATGCTTGTTTTTCCTGTTATCTTCTATCCACTGCGGCTCAACTTGGATGACCTCGTCTTCCCCTCATCTAGGCCTCTGGTTTCAGATAATTGTAGGTTTGCATTAAGCACCATTGGGCTCATTTCTGTTGTCTTCGTGGGTGCAAATTTTATACCCAGCATCTGGGATGTCTTCCAGTTTTCTGGAGCTACTGCTACAGTTTGCATTGGGTTCATCTTTCCTGCTGCCATTGCTCTAAGAGATCGACATCAAATAGCAACAAGAAAGGACAAGATTTTCTCTGTTTTCATGATTGGTCTTGCCGTGTTCTCAAATGTGATAGCAATATACAGTGATACCACTGCCCTGTTAAAACAGGTGGTGTCCCATGGTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

52.4

Weight (kDa)

8.4

Isoelectric Point (pI)

25.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000616)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1233
AccI GTMKAC 2 cut(s) 471, 927
AciI CCGC 1 cut(s) 1105
AcsI RAATTY 3 cut(s) 179, 722, 1216
AfaI GTAC 1 cut(s) 577
AfiI CCNNNNNNNGG 4 cut(s) 750, 964, 1140, 1233
AgsI TTSAA 4 cut(s) 184, 513, 841, 887
AjnI CCWGG 1 cut(s) 749
AjuI GAANNNNNNNTTGG 2 cut(s) 534, 566
AluBI AGCT 4 cut(s) 413, 865, 1026, 1259
AluI AGCT 4 cut(s) 413, 865, 1026, 1259
Alw21I GWGCWC 1 cut(s) 920
AlwNI CAGNNNCTG 1 cut(s) 1233
AoxI GGCC 3 cut(s) 327, 660, 1142
ApeKI GCWGC 4 cut(s) 139, 156, 586, 1295
ApoI RAATTY 3 cut(s) 179, 722, 1216
Asp700I GAANNNNTTC 3 cut(s) 508, 640, 794
AspLEI GCGC 1 cut(s) 676
AsuHPI GGTGA 4 cut(s) 457, 500, 515, 566
AsuNHI GCTAGC 1 cut(s) 988
BaeI ACNNNNGTAYC 2 cut(s) 559, 592
BanII GRGCYC 1 cut(s) 1191
BbsI GAAGAC 3 cut(s) 1120, 1195, 1234
Bbv12I GWGCWC 1 cut(s) 920
BbvI GCAGC 4 cut(s) 126, 143, 573, 1282
BceAI ACGGC 1 cut(s) 1358
BciT130I CCWGG 1 cut(s) 751
BclI TGATCA 1 cut(s) 300
BfaI CTAG 3 cut(s) 692, 989, 1140
BfmI CTRYAG 2 cut(s) 702, 1266
BisI GCNGC 5 cut(s) 140, 157, 587, 1106, 1296
BlsI GCNGC 5 cut(s) 141, 158, 588, 1107, 1297
Bme1390I CCNGG 1 cut(s) 751
BmiI GGNNCC 2 cut(s) 755, 953
BmrFI CCNGG 1 cut(s) 751
BmsI GCATC 7 cut(s) 200, 388, 632, 788, 1023, 1059, 1239
BmtI GCTAGC 1 cut(s) 992
BpiI GAAGAC 3 cut(s) 1120, 1195, 1234
BplI GAGNNNNNCTC 2 cut(s) 17, 49
BpmI CTGGAG 3 cut(s) 537, 552, 1275
Bpu10I CCTNAGC 1 cut(s) 664
BpuEI CTTGAG 1 cut(s) 887
BsaBI GATNNNNATC 2 cut(s) 655, 1317
BsaJI CCNNGG 4 cut(s) 333, 749, 1009, 1438
BsaXI ACNNNNNCTCC 2 cut(s) 329, 359
Bsc4I CCNNNNNNNGG 4 cut(s) 750, 964, 1140, 1233
Bse1I ACTGG 3 cut(s) 520, 566, 1246
Bse3DI GCAATG 2 cut(s) 865, 1299
Bse8I GATNNNNATC 2 cut(s) 655, 1317
BseBI CCWGG 1 cut(s) 751
BseDI CCNNGG 4 cut(s) 333, 749, 1009, 1438
BseGI GGATG 5 cut(s) 403, 623, 1014, 1123, 1243
BseJI GATNNNNATC 2 cut(s) 655, 1317
BseLI CCNNNNNNNGG 4 cut(s) 750, 964, 1140, 1233
BseMI GCAATG 2 cut(s) 865, 1299
BseNI ACTGG 3 cut(s) 520, 566, 1246
BseXI GCAGC 4 cut(s) 126, 143, 573, 1282
BseYI CCCAGC 4 cut(s) 239, 274, 413, 1226
BsgI GTGCAG 4 cut(s) 194, 225, 917, 1049
BshFI GGCC 3 cut(s) 329, 662, 1144
BsiHKAI GWGCWC 1 cut(s) 920
BslFI GGGAC 2 cut(s) 980, 1420
BslI CCNNNNNNNGG 4 cut(s) 750, 964, 1140, 1233
BsmFI GGGAC 2 cut(s) 980, 1420
BsnI GGCC 3 cut(s) 329, 662, 1144
Bsp1286I GDGCHC 2 cut(s) 920, 1191
Bsp143I GATC 3 cut(s) 300, 477, 1312
Bsp19I CCATGG 1 cut(s) 1438
BspACI CCGC 1 cut(s) 1105
BspANI GGCC 3 cut(s) 329, 662, 1144
BspHI TCATGA 2 cut(s) 976, 1359
BspLI GGNNCC 2 cut(s) 755, 953
BspMAI CTGCAG 1 cut(s) 706
BspOI GCTAGC 1 cut(s) 992
BspQI GCTCTTC 1 cut(s) 925
BsrDI GCAATG 2 cut(s) 865, 1299
BsrI ACTGG 3 cut(s) 520, 566, 1246
BssECI CCNNGG 4 cut(s) 333, 749, 1009, 1438
BssMI GATC 3 cut(s) 300, 477, 1312
BssT1I CCWWGG 2 cut(s) 1009, 1438
Bst2UI CCWGG 1 cut(s) 751
Bst4CI ACNGT 4 cut(s) 43, 802, 1270, 1403
Bst6I CTCTTC 4 cut(s) 18, 800, 880, 925
BstAPI GCANNNNNTGC 3 cut(s) 172, 197, 1072
BstC8I GCNNGC 6 cut(s) 83, 110, 168, 258, 678, 990
BstDEI CTNAG 2 cut(s) 664, 1307
BstDSI CCRYGG 2 cut(s) 333, 1438
BstENI CCTNNNNNAGG 1 cut(s) 1138
BstF5I GGATG 5 cut(s) 403, 623, 1014, 1123, 1243
BstHHI GCGC 1 cut(s) 676
BstKTI GATC 3 cut(s) 303, 480, 1315
BstMBI GATC 3 cut(s) 300, 477, 1312
BstMWI GCNNNNNNNGC 6 cut(s) 172, 197, 257, 620, 1072, 1301
BstNI CCWGG 1 cut(s) 751
BstSCI CCNGG 1 cut(s) 749
BstSFI CTRYAG 2 cut(s) 702, 1266
BstV1I GCAGC 4 cut(s) 126, 143, 573, 1282
BstV2I GAAGAC 3 cut(s) 1120, 1195, 1234
BstXI CCANNNNNNTGG 1 cut(s) 1253
BsuRI GGCC 3 cut(s) 329, 662, 1144
BtgI CCRYGG 2 cut(s) 333, 1438
BtgZI GCGATG 1 cut(s) 174
BtsCI GGATG 5 cut(s) 403, 623, 1014, 1123, 1243
BtsI GCAGTG 5 cut(s) 134, 177, 213, 1100, 1410
BtsIMutI CAGTG 9 cut(s) 39, 72, 134, 177, 213, 559, 1100, 1408, 1410
Cac8I GCNNGC 6 cut(s) 83, 110, 168, 258, 678, 990
CaiI CAGNNNCTG 1 cut(s) 1233
CciI TCATGA 2 cut(s) 976, 1359
CfoI GCGC 1 cut(s) 676
Csp6I GTAC 1 cut(s) 576
CviAII CATG 8 cut(s) 265, 527, 745, 977, 1072, 1360, 1439, 1446
CviQI GTAC 1 cut(s) 576
DdeI CTNAG 2 cut(s) 664, 1307
DpnI GATC 3 cut(s) 302, 479, 1314
DpnII GATC 3 cut(s) 300, 477, 1312
Eam1104I CTCTTC 4 cut(s) 18, 800, 880, 925
EarI CTCTTC 4 cut(s) 18, 800, 880, 925
Eco130I CCWWGG 2 cut(s) 1009, 1438
Eco147I AGGCCT 2 cut(s) 329, 1144
Eco24I GRGCYC 1 cut(s) 1191
EcoNI CCTNNNNNAGG 1 cut(s) 1138
EcoRI GAATTC 1 cut(s) 179
EcoRII CCWGG 1 cut(s) 749
EcoT14I CCWWGG 2 cut(s) 1009, 1438
EcoT38I GRGCYC 1 cut(s) 1191
ErhI CCWWGG 2 cut(s) 1009, 1438
FaeI CATG 8 cut(s) 268, 530, 748, 980, 1075, 1363, 1442, 1449
FaqI GGGAC 2 cut(s) 980, 1420
FatI CATG 8 cut(s) 264, 526, 744, 976, 1071, 1359, 1438, 1445
FbaI TGATCA 1 cut(s) 300
FblI GTMKAC 2 cut(s) 471, 927
Fnu4HI GCNGC 5 cut(s) 140, 157, 587, 1106, 1296
FokI GGATG 5 cut(s) 410, 610, 1001, 1130, 1250
FriOI GRGCYC 1 cut(s) 1191
Fsp4HI GCNGC 5 cut(s) 140, 157, 587, 1106, 1296
FspBI CTAG 3 cut(s) 692, 989, 1140
GlaI GCGC 1 cut(s) 675
GluI GCNGC 5 cut(s) 140, 157, 587, 1106, 1296
GsaI CCCAGC 4 cut(s) 243, 278, 417, 1230
GsuI CTGGAG 3 cut(s) 537, 552, 1275
HaeIII GGCC 3 cut(s) 329, 662, 1144
HhaI GCGC 1 cut(s) 676
Hin1II CATG 8 cut(s) 268, 530, 748, 980, 1075, 1363, 1442, 1449
Hin6I GCGC 1 cut(s) 674
HinP1I GCGC 1 cut(s) 674
HincII GTYRAC 1 cut(s) 222
HindII GTYRAC 1 cut(s) 222
HinfI GANTC 7 cut(s) 128, 641, 708, 790, 872, 883, 968
HphI GGTGA 4 cut(s) 457, 500, 515, 566
Hpy166II GTNNAC 7 cut(s) 46, 222, 448, 472, 523, 557, 928
Hpy188I TCNGA 3 cut(s) 150, 383, 1156
Hpy188III TCNNGA 4 cut(s) 501, 977, 1254, 1360
Hpy8I GTNNAC 7 cut(s) 46, 222, 448, 472, 523, 557, 928
HpyAV CCTTC 5 cut(s) 412, 536, 589, 767, 835
HpyCH4III ACNGT 4 cut(s) 43, 802, 1270, 1403
HpyCH4IV ACGT 1 cut(s) 843
HpyF10VI GCNNNNNNNGC 6 cut(s) 172, 197, 257, 620, 1072, 1301
HpyF3I CTNAG 2 cut(s) 664, 1307
HpySE526I ACGT 1 cut(s) 843
Hsp92II CATG 8 cut(s) 268, 530, 748, 980, 1075, 1363, 1442, 1449
HspAI GCGC 1 cut(s) 674
Ksp22I TGATCA 1 cut(s) 300
Kzo9I GATC 3 cut(s) 300, 477, 1312
LguI GCTCTTC 1 cut(s) 925
LmnI GCTCC 2 cut(s) 619, 1256
Lsp1109I GCAGC 4 cut(s) 126, 143, 573, 1282
LweI GCATC 7 cut(s) 200, 388, 632, 788, 1023, 1059, 1239
MaeI CTAG 3 cut(s) 692, 989, 1140
MaeII ACGT 1 cut(s) 843
MaeIII GTNAC 2 cut(s) 592, 817
MalI GATC 3 cut(s) 302, 479, 1314
MboI GATC 3 cut(s) 300, 477, 1312
MfeI CAATTG 1 cut(s) 891
MhlI GDGCHC 2 cut(s) 920, 1191
MluCI AATT 5 cut(s) 179, 722, 891, 1159, 1216
MlyI GAGTC 2 cut(s) 866, 962
MroXI GAANNNNTTC 3 cut(s) 508, 640, 794
MseI TTAA 6 cut(s) 120, 213, 629, 720, 1175, 1421
MslI CAYNNNNRTG 3 cut(s) 269, 784, 981
MspR9I CCNGG 1 cut(s) 751
MunI CAATTG 1 cut(s) 891
MvaI CCWGG 1 cut(s) 751
MwoI GCNNNNNNNGC 6 cut(s) 172, 197, 257, 620, 1072, 1301
NcoI CCATGG 1 cut(s) 1438
NdeII GATC 3 cut(s) 300, 477, 1312
NheI GCTAGC 1 cut(s) 988
NlaIII CATG 8 cut(s) 268, 530, 748, 980, 1075, 1363, 1442, 1449
NlaIV GGNNCC 2 cut(s) 755, 953
NmuCI GTSAC 2 cut(s) 592, 817
PagI TCATGA 2 cut(s) 976, 1359
PceI AGGCCT 2 cut(s) 329, 1144
PciSI GCTCTTC 1 cut(s) 925
PdmI GAANNNNTTC 3 cut(s) 508, 640, 794
PfeI GAWTC 5 cut(s) 128, 641, 708, 790, 883
PflFI GACNNNGTC 1 cut(s) 1124
PflMI CCANNNNNTGG 1 cut(s) 1233
PkrI GCNGC 5 cut(s) 141, 158, 588, 1107, 1297
PleI GAGTC 2 cut(s) 866, 962
PpsI GAGTC 2 cut(s) 866, 962
Psp6I CCWGG 1 cut(s) 749
PspFI CCCAGC 4 cut(s) 239, 274, 413, 1226
PspGI CCWGG 1 cut(s) 749
PspN4I GGNNCC 2 cut(s) 755, 953
PstI CTGCAG 1 cut(s) 706
PstNI CAGNNNCTG 1 cut(s) 1233
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 1 cut(s) 577
RsaNI GTAC 1 cut(s) 576
RseI CAYNNNNRTG 3 cut(s) 269, 784, 981
SapI GCTCTTC 1 cut(s) 925
SaqAI TTAA 6 cut(s) 120, 213, 629, 720, 1175, 1421
SatI GCNGC 5 cut(s) 140, 157, 587, 1106, 1296
Sau3AI GATC 3 cut(s) 300, 477, 1312
SchI GAGTC 2 cut(s) 866, 962
ScrFI CCNGG 1 cut(s) 751
SduI GDGCHC 2 cut(s) 920, 1191
SfaNI GCATC 7 cut(s) 200, 388, 632, 788, 1023, 1059, 1239
SfcI CTRYAG 2 cut(s) 702, 1266
SmiMI CAYNNNNRTG 3 cut(s) 269, 784, 981
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
Sse9I AATT 5 cut(s) 179, 722, 891, 1159, 1216
SseBI AGGCCT 2 cut(s) 329, 1144
SsiI CCGC 1 cut(s) 1105
SspI AATATT 1 cut(s) 775
SspMI CTAG 3 cut(s) 692, 989, 1140
StuI AGGCCT 2 cut(s) 329, 1144
StyD4I CCNGG 1 cut(s) 749
StyI CCWWGG 2 cut(s) 1009, 1438
TaaI ACNGT 4 cut(s) 43, 802, 1270, 1403
TaiI ACGT 1 cut(s) 846
TaqI TCGA 1 cut(s) 1315
TasI AATT 5 cut(s) 179, 722, 891, 1159, 1216
TauI GCSGC 1 cut(s) 1108
TfiI GAWTC 5 cut(s) 128, 641, 708, 790, 883
Tru1I TTAA 6 cut(s) 120, 213, 629, 720, 1175, 1421
Tru9I TTAA 6 cut(s) 120, 213, 629, 720, 1175, 1421
TscAI CASTG 9 cut(s) 46, 79, 141, 177, 213, 566, 1107, 1408, 1417
TseFI GTSAC 2 cut(s) 592, 817
TseI GCWGC 4 cut(s) 139, 156, 586, 1295
Tsp45I GTSAC 2 cut(s) 592, 817
TspDTI ATGAA 6 cut(s) 17, 281, 633, 817, 1273, 1348
TspGWI ACGGA 3 cut(s) 322, 747, 913
TspRI CASTG 9 cut(s) 46, 79, 141, 177, 213, 566, 1107, 1408, 1417
Tth111I GACNNNGTC 1 cut(s) 1124
Van91I CCANNNNNTGG 1 cut(s) 1233
XagI CCTNNNNNAGG 1 cut(s) 1138
XapI RAATTY 3 cut(s) 179, 722, 1216
XcmI CCANNNNNNNNNTGG 1 cut(s) 271
XmiI GTMKAC 2 cut(s) 471, 927
XmnI GAANNNNTTC 3 cut(s) 508, 640, 794
XspI CTAG 3 cut(s) 692, 989, 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.