FvH4_2g32550

sodium-coupled neutral amino acid transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000616
Physical Location & Seq
Forward (+)
24643134 .. 24645624
2491 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g32550.t7

Sequence Viewer

Length: 1362 bp
ATGACGATTCCGACGGCCGACATGAAATTCAGGCGGACCCCGAAATCCCCGCTGCTGCCAAAAAAGCGCAGCGGCGACAGTGAGGCCGGCTTCGACGGCGCGTCGTTCTCCGGCGCCGTCTTCAACCTCTCCACCACAATCGTCGGCGCCGGAATCATGGCCCTGCCGGCCGCCGTCAAGCAATTGGGGTTGATTCCAGGCCTCATTATGATCGTATTGGGCGCCGTGCTGACGGAATCGTCCATCGACATGATACTCCGGTTCACACGCGCCTCGAAGACATCCTCGTACTCCGGTCTGGTCGGGGACTCGTTCGGTGGGCCCAGCCGGAACCTCCTCCAGGTCTGCGTCGTCGTTAACAACCTCGGCATGCTCGTTGTCTACATGATCATCATGGGTGATGTGCTTTCCGGTACGTGGACGGATGGGGTCCACCACTCGGGTGTGATGGAGGAGTGGTTTGGTCAGCGTTGGTGGACCGCGCGATTCTCTCTGCTACTTGCTACCACGCTCTTTGTGCTTGCTCCTCTTATCTCTTTCAAGCGCGTGGATTCATTGAGATACACATCGGCATTGTCAGTTGGTTTGGCGGTTGTGTTTGTGGCGATCATTGCCGGAGTGGCGACAGTGAAGTTAATAGAAGGAGGGGTTGGATTTCCACGGTTGATGCCGAAACTTGAGGACCAAGCATCGTTTTGGAAGCTTTTCACTACCATTCCCATTCTTGTTACTGCCTATATCTGCCACCATAACATTCATCCAATTGAGAATGAGCTAGTAGACCCTAATCAGATGAAGTCAATAGTACGAACGTCACTTACATTTTGCTCTTCCGTGTATGTTGCGACCAGCTTCTTTGGTTTTCTTCTCTTTGGGGATCAAACGTTGGATGATGTACTGGCAAATTTTGATGGTGATCTCGGAATTCCATATAGCTCATTTCTTGATGATATTGTTAGGGTGAGCTATGGCCTCCACCTGATGCTTGTTTTCCCAATTGTATTTTTCTCTCTTCGCCTCAATTTGGACGGGCTTCTCTTTCCCTATGCCATTCCTATTGCCTTTGACAATCGAAGATTCTACTTGATAACAGCAGCATTGATGGGTTTTATCTTTTTGGGAGCCAATTTTATTCCAAGTATCTGGGATGCCTTCCAGTTCACAGGTGCTACTGCTGCGATCTCCGTTGGTTACATATTTCCAGCTGCCGTTGCCCTCAGGGACACTCATGGAATTGCAACAAAGAAGGACAGACTAGTATCATTGGTGATGATCCTTTTAGCAGTCTCTTCTAGCACAGTGGCCATCTCTAGTGACATTTACAGCTATTTCTGTAGTAACAAAGGAGCGGCACAAAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04724 ko04727 ko04974 map04724 map04727 map04974
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

454

Amino Acids

49.18

Weight (kDa)

7.69

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 34 - 251 1.4e-30 Transmembrane amino acid transporter protein
Trp_Tyr_perm PF03222 35 - 251 1.7e-09 Tryptophan/tyrosine permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000616)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30390 AT3G30390 AT3G30390 AT5G38820 AT5G38820 AT5G38820
fragaria_vesca FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_4g28960 FvH4_6g46060 FvH4_6g46060 FvH4_6g46080
malus_domestica MD09G1077200.v1.1 MD09G1077400.v1.1 MD15G1064300.v1.1 MD16G1053900.v1.1 MD17G1067600.v1.1 MD17G1067800.v1.1
prunus_persica Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G418300_v2.0.a1 Prupe.3G246600_v2.0.a1 Prupe.3G246800_v2.0.a1 Prupe.3G246900_v2.0.a1
pyrus_communis pycom09g00430 pycom09g00450 pycom15g06100 pycom16g04690 pycom17g06820
rosa_chinensis RchiOBHm_Chr2g0164381 RchiOBHm_Chr2g0164401 RchiOBHm_Chr4g0437101 RchiOBHm_Chr6g0310121
rosa_laevigata RLG00000006468 RLG00000010508 RLG00000021456 RLG00000021458
rosa_multiflora Rmu_co8348867.1_g000001 Rmu_sc0000294.1_g000029 Rmu_sc0009487.1_g000003 Rmu_sc0018759.1_g000001 Rmu_sc0021401.1_g000003 Rmu_ssc0000006.1_g000009
rosa_roxburghii Rroxscaffold_2G00086590 Rroxscaffold_2G00086610 Rroxscaffold_5G00378170 Rroxscaffold_7G00158840
rosa_rugosa Rorug02G0508200 Rorug02G0508300 Rorug04G0298000 Rorug06G0377600
rosa_samantha Rh2AG576200 Rh2AG576400 Rh2BG587200 Rh2BG587400 Rh2CG558000 Rh2CG558200 Rh2DG596900 Rh2DG597200 Rh4AG352800 Rh4BG362300 Rh4CG376500 Rh4DG356300 Rh6AG491600 Rh6BG501000 Rh6CG506000 Rh6DG492100
rosa_wichuraiana Rw2G047720 Rw2G047740 Rw2G047820 Rw2G047840 Rw4G030890 Rw6G042770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 238
AccB1I GGYRCC 3 cut(s) 113, 146, 221
AccBSI CCGCTC 1 cut(s) 1349
AccI GTMKAC 2 cut(s) 381, 780
AccII CGCG 5 cut(s) 101, 270, 482, 484, 546
AciI CCGC 7 cut(s) 34, 50, 72, 171, 480, 590, 1349
AclI AACGTT 1 cut(s) 884
AclWI GGATC 2 cut(s) 885, 1267
AcoI YGGCCR 3 cut(s) 15, 168, 1302
AcsI RAATTY 3 cut(s) 26, 904, 924
AcyI GRCGYC 3 cut(s) 114, 147, 222
AfaI GTAC 4 cut(s) 290, 415, 807, 897
AfiI CCNNNNNNNGG 4 cut(s) 340, 417, 439, 1024
AgsI TTSAA 2 cut(s) 124, 541
AhdI GACNNNNNGTC 1 cut(s) 100
AhlI ACTAGT 1 cut(s) 1255
AjnI CCWGG 2 cut(s) 196, 339
AjuI GAANNNNNNNTTGG 2 cut(s) 633, 665
AleI CACNNNNGTG 1 cut(s) 441
AluBI AGCT 8 cut(s) 703, 775, 852, 936, 966, 1205, 1326, 1359
AluI AGCT 8 cut(s) 703, 775, 852, 936, 966, 1205, 1326, 1359
Alw26I GTCTC 1 cut(s) 1291
AlwI GGATC 2 cut(s) 885, 1267
Ama87I CYCGRG 1 cut(s) 439
AoxI GGCC 8 cut(s) 15, 84, 159, 168, 199, 320, 970, 1302
ApaI GGGCCC 1 cut(s) 324
ApeKI GCWGC 6 cut(s) 52, 55, 69, 1094, 1175, 1205
ApoI RAATTY 3 cut(s) 26, 904, 924
Asp700I GAANNNNTTC 1 cut(s) 704
AspLEI GCGC 8 cut(s) 69, 101, 116, 149, 224, 272, 484, 546
AspS9I GGNCC 7 cut(s) 36, 160, 320, 321, 430, 477, 682
AsuHPI GGTGA 4 cut(s) 410, 926, 973, 1279
AvaI CYCGRG 1 cut(s) 439
AvaII GGWCC 4 cut(s) 36, 430, 477, 682
AxyI CCTNAGG 1 cut(s) 1217
BaeGI GKGCMC 1 cut(s) 324
BaeI ACNNNNGTAYC 2 cut(s) 245, 278
BalI TGGCCA 1 cut(s) 1304
BanI GGYRCC 3 cut(s) 113, 146, 221
BanII GRGCYC 1 cut(s) 324
BbsI GAAGAC 2 cut(s) 112, 284
BbvI GCAGC 6 cut(s) 39, 42, 81, 1106, 1162, 1192
BccI CCATC 6 cut(s) 251, 419, 442, 905, 1096, 1313
BceAI ACGGC 6 cut(s) 30, 101, 112, 158, 209, 1193
BciT130I CCWGG 2 cut(s) 198, 341
BclI TGATCA 1 cut(s) 387
BcoDI GTCTC 1 cut(s) 1291
BcuI ACTAGT 1 cut(s) 1255
BfaI CTAG 4 cut(s) 776, 1256, 1293, 1311
BfmI CTRYAG 1 cut(s) 1333
BfoI RGCGCY 3 cut(s) 117, 150, 225
BglI GCCNNNNNGGC 2 cut(s) 167, 620
BisI GCNGC 9 cut(s) 53, 56, 70, 73, 171, 1095, 1176, 1206, 1350
BlsI GCNGC 9 cut(s) 54, 57, 71, 74, 172, 1096, 1177, 1207, 1351
Bme1390I CCNGG 2 cut(s) 198, 341
Bme18I GGWCC 4 cut(s) 36, 430, 477, 682
BmeRI GACNNNNNGTC 1 cut(s) 100
BmeT110I CYCGRG 1 cut(s) 439
BmgT120I GGNCC 7 cut(s) 36, 160, 320, 321, 430, 477, 682
BmiI GGNNCC 8 cut(s) 38, 115, 148, 223, 322, 332, 431, 1123
BmrFI CCNGG 2 cut(s) 198, 341
BmsI GCATC 4 cut(s) 657, 698, 972, 1138
BpiI GAAGAC 2 cut(s) 112, 284
BpmI CTGGAG 1 cut(s) 323
BpuEI CTTGAG 1 cut(s) 698
BsaAI YACGTR 1 cut(s) 417
BsaBI GATNNNNATC 2 cut(s) 565, 915
BsaHI GRCGYC 3 cut(s) 114, 147, 222
BsaJI CCNNGG 2 cut(s) 364, 659
BsaWI WCCGGW 3 cut(s) 258, 293, 410
BsaXI ACNNNNNCTCC 2 cut(s) 443, 473
Bsc4I CCNNNNNNNGG 4 cut(s) 340, 417, 439, 1024
Bse118I RCCGGY 2 cut(s) 86, 166
Bse1I ACTGG 2 cut(s) 903, 1156
Bse21I CCTNAGG 1 cut(s) 1217
Bse3DI GCAATG 1 cut(s) 609
Bse8I GATNNNNATC 2 cut(s) 565, 915
BseBI CCWGG 2 cut(s) 198, 341
BseDI CCNNGG 2 cut(s) 364, 659
BseGI GGATG 5 cut(s) 281, 430, 757, 895, 1153
BseJI GATNNNNATC 2 cut(s) 565, 915
BseLI CCNNNNNNNGG 4 cut(s) 340, 417, 439, 1024
BseMI GCAATG 1 cut(s) 609
BseMII CTCAG 1 cut(s) 1231
BseNI ACTGG 2 cut(s) 903, 1156
BseRI GAGGAG 3 cut(s) 326, 467, 516
BseSI GKGCMC 1 cut(s) 324
BseX3I CGGCCG 2 cut(s) 15, 168
BseXI GCAGC 6 cut(s) 39, 42, 81, 1106, 1162, 1192
BseYI CCCAGC 1 cut(s) 323
Bsh1236I CGCG 5 cut(s) 101, 270, 482, 484, 546
Bsh1285I CGRYCG 2 cut(s) 18, 171
BshFI GGCC 8 cut(s) 17, 86, 161, 170, 201, 322, 972, 1304
BshNI GGYRCC 3 cut(s) 113, 146, 221
BsiEI CGRYCG 2 cut(s) 18, 171
BsiHKCI CYCGRG 1 cut(s) 439
BsiSI CCGG 9 cut(s) 87, 111, 150, 167, 259, 294, 328, 411, 615
BslFI GGGAC 2 cut(s) 320, 1235
BslI CCNNNNNNNGG 4 cut(s) 340, 417, 439, 1024
BsmAI GTCTC 1 cut(s) 1291
BsmFI GGGAC 2 cut(s) 320, 1235
BsnI GGCC 8 cut(s) 17, 86, 161, 170, 201, 322, 972, 1304
BsoBI CYCGRG 1 cut(s) 439
Bsp120I GGGCCC 1 cut(s) 320
Bsp1286I GDGCHC 1 cut(s) 324
Bsp143I GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
BspACI CCGC 7 cut(s) 34, 50, 72, 171, 480, 590, 1349
BspANI GGCC 8 cut(s) 17, 86, 161, 170, 201, 322, 972, 1304
BspCNI CTCAG 1 cut(s) 1230
BspFNI CGCG 5 cut(s) 101, 270, 482, 484, 546
BspLI GGNNCC 8 cut(s) 38, 115, 148, 223, 322, 332, 431, 1123
BspPI GGATC 2 cut(s) 885, 1267
BspQI GCTCTTC 1 cut(s) 835
BspT107I GGYRCC 3 cut(s) 113, 146, 221
BsrBI CCGCTC 1 cut(s) 1349
BsrDI GCAATG 1 cut(s) 609
BsrFI RCCGGY 2 cut(s) 86, 166
BsrI ACTGG 2 cut(s) 903, 1156
BssAI RCCGGY 2 cut(s) 86, 166
BssECI CCNNGG 2 cut(s) 364, 659
BssMI GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
BssNI GRCGYC 3 cut(s) 114, 147, 222
Bst2UI CCWGG 2 cut(s) 198, 341
Bst4CI ACNGT 4 cut(s) 80, 628, 663, 1300
Bst6I CTCTTC 3 cut(s) 835, 1017, 1294
BstACI GRCGYC 3 cut(s) 114, 147, 222
BstBAI YACGTR 1 cut(s) 417
BstC8I GCNNGC 4 cut(s) 88, 168, 371, 522
BstDEI CTNAG 1 cut(s) 1217
BstDSI CCRYGG 1 cut(s) 659
BstENI CCTNNNNNAGG 1 cut(s) 338
BstF5I GGATG 5 cut(s) 281, 430, 757, 895, 1153
BstFNI CGCG 5 cut(s) 101, 270, 482, 484, 546
BstH2I RGCGCY 3 cut(s) 117, 150, 225
BstHHI GCGC 8 cut(s) 69, 101, 116, 149, 224, 272, 484, 546
BstKTI GATC 7 cut(s) 213, 390, 609, 880, 919, 1182, 1275
BstMAI GTCTC 1 cut(s) 1291
BstMBI GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
BstMCI CGRYCG 2 cut(s) 18, 171
BstMWI GCNNNNNNNGC 8 cut(s) 64, 96, 167, 517, 611, 620, 1175, 1211
BstNI CCWGG 2 cut(s) 198, 341
BstNSI RCATGY 1 cut(s) 373
BstSCI CCNGG 2 cut(s) 196, 339
BstSFI CTRYAG 1 cut(s) 1333
BstSLI GKGCMC 1 cut(s) 324
BstUI CGCG 5 cut(s) 101, 270, 482, 484, 546
BstV1I GCAGC 6 cut(s) 39, 42, 81, 1106, 1162, 1192
BstV2I GAAGAC 2 cut(s) 112, 284
BstXI CCANNNNNNTGG 1 cut(s) 1143
BstZI CGGCCG 2 cut(s) 15, 168
Bsu36I CCTNAGG 1 cut(s) 1217
BsuRI GGCC 8 cut(s) 17, 86, 161, 170, 201, 322, 972, 1304
BtgI CCRYGG 1 cut(s) 659
BtsCI GGATG 5 cut(s) 281, 430, 757, 895, 1153
BtsIMutI CAGTG 3 cut(s) 85, 633, 1305
Cac8I GCNNGC 4 cut(s) 88, 168, 371, 522
CfoI GCGC 8 cut(s) 69, 101, 116, 149, 224, 272, 484, 546
Cfr10I RCCGGY 2 cut(s) 86, 166
Cfr13I GGNCC 7 cut(s) 36, 160, 320, 321, 430, 477, 682
CseI GACGC 2 cut(s) 90, 337
Csp6I GTAC 4 cut(s) 289, 414, 806, 896
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 7 cut(s) 22, 157, 250, 370, 385, 394, 1229
CviQI GTAC 4 cut(s) 289, 414, 806, 896
DdeI CTNAG 1 cut(s) 1217
DinI GGCGCC 3 cut(s) 115, 148, 223
DpnI GATC 7 cut(s) 212, 389, 608, 879, 918, 1181, 1274
DpnII GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
DrdI GACNNNNNNGTC 1 cut(s) 238
DriI GACNNNNNGTC 1 cut(s) 100
DseDI GACNNNNNNGTC 1 cut(s) 238
EaeI YGGCCR 3 cut(s) 15, 168, 1302
EagI CGGCCG 2 cut(s) 15, 168
Eam1104I CTCTTC 3 cut(s) 835, 1017, 1294
Eam1105I GACNNNNNGTC 1 cut(s) 100
EarI CTCTTC 3 cut(s) 835, 1017, 1294
EciI GGCGGA 1 cut(s) 49
EclXI CGGCCG 2 cut(s) 15, 168
Eco147I AGGCCT 1 cut(s) 201
Eco24I GRGCYC 1 cut(s) 324
Eco47I GGWCC 4 cut(s) 36, 430, 477, 682
Eco52I CGGCCG 2 cut(s) 15, 168
Eco81I CCTNAGG 1 cut(s) 1217
Eco88I CYCGRG 1 cut(s) 439
EcoNI CCTNNNNNAGG 1 cut(s) 338
EcoRI GAATTC 1 cut(s) 924
EcoRII CCWGG 2 cut(s) 196, 339
EcoT38I GRGCYC 1 cut(s) 324
EgeI GGCGCC 3 cut(s) 115, 148, 223
EheI GGCGCC 3 cut(s) 115, 148, 223
FaeI CATG 7 cut(s) 25, 160, 253, 373, 388, 397, 1232
FaqI GGGAC 2 cut(s) 320, 1235
FatI CATG 7 cut(s) 21, 156, 249, 369, 384, 393, 1228
FauI CCCGC 1 cut(s) 57
FbaI TGATCA 1 cut(s) 387
FblI GTMKAC 2 cut(s) 381, 780
Fnu4HI GCNGC 9 cut(s) 53, 56, 70, 73, 171, 1095, 1176, 1206, 1350
FokI GGATG 5 cut(s) 268, 437, 744, 902, 1160
FriOI GRGCYC 1 cut(s) 324
Fsp4HI GCNGC 9 cut(s) 53, 56, 70, 73, 171, 1095, 1176, 1206, 1350
FspBI CTAG 4 cut(s) 776, 1256, 1293, 1311
GlaI GCGC 8 cut(s) 68, 100, 115, 148, 223, 271, 483, 545
GluI GCNGC 9 cut(s) 53, 56, 70, 73, 171, 1095, 1176, 1206, 1350
GsaI CCCAGC 1 cut(s) 327
GsuI CTGGAG 1 cut(s) 323
HaeII RGCGCY 3 cut(s) 117, 150, 225
HaeIII GGCC 8 cut(s) 17, 86, 161, 170, 201, 322, 972, 1304
HapII CCGG 9 cut(s) 87, 111, 150, 167, 259, 294, 328, 411, 615
HgaI GACGC 2 cut(s) 90, 337
HhaI GCGC 8 cut(s) 69, 101, 116, 149, 224, 272, 484, 546
Hin1I GRCGYC 3 cut(s) 114, 147, 222
Hin1II CATG 7 cut(s) 25, 160, 253, 373, 388, 397, 1232
Hin6I GCGC 8 cut(s) 67, 99, 114, 147, 222, 270, 482, 544
HinP1I GCGC 8 cut(s) 67, 99, 114, 147, 222, 270, 482, 544
HincII GTYRAC 1 cut(s) 358
HindII GTYRAC 1 cut(s) 358
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 8 cut(s) 7, 153, 193, 236, 308, 486, 551, 1077
HpaI GTTAAC 1 cut(s) 358
HpaII CCGG 9 cut(s) 87, 111, 150, 167, 259, 294, 328, 411, 615
HphI GGTGA 4 cut(s) 410, 926, 973, 1279
Hpy166II GTNNAC 8 cut(s) 264, 358, 382, 420, 433, 477, 781, 1161
Hpy188I TCNGA 3 cut(s) 12, 792, 923
Hpy188III TCNNGA 1 cut(s) 944
Hpy8I GTNNAC 8 cut(s) 264, 358, 382, 420, 433, 477, 781, 1161
Hpy99I CGWCG 6 cut(s) 16, 98, 106, 146, 353, 356
HpyAV CCTTC 3 cut(s) 635, 1162, 1240
HpyCH4III ACNGT 4 cut(s) 80, 628, 663, 1300
HpyCH4IV ACGT 3 cut(s) 416, 812, 884
HpyCH4V TGCA 1 cut(s) 1238
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 96, 167, 517, 611, 620, 1175, 1211
HpyF3I CTNAG 1 cut(s) 1217
HpySE526I ACGT 3 cut(s) 416, 812, 884
Hsp92I GRCGYC 3 cut(s) 114, 147, 222
Hsp92II CATG 7 cut(s) 25, 160, 253, 373, 388, 397, 1232
HspAI GCGC 8 cut(s) 67, 99, 114, 147, 222, 270, 482, 544
KasI GGCGCC 3 cut(s) 113, 146, 221
KroI GCCGGC 2 cut(s) 86, 166
KroNI GCCGGC 2 cut(s) 88, 168
Ksp22I TGATCA 1 cut(s) 387
KspAI GTTAAC 1 cut(s) 358
Kzo9I GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
LguI GCTCTTC 1 cut(s) 835
LmnI GCTCC 3 cut(s) 529, 1121, 1346
Lsp1109I GCAGC 6 cut(s) 39, 42, 81, 1106, 1162, 1192
LweI GCATC 4 cut(s) 657, 698, 972, 1138
MaeI CTAG 4 cut(s) 776, 1256, 1293, 1311
MaeII ACGT 3 cut(s) 416, 812, 884
MaeIII GTNAC 5 cut(s) 727, 813, 1190, 1313, 1337
MalI GATC 7 cut(s) 212, 389, 608, 879, 918, 1181, 1274
MbiI CCGCTC 1 cut(s) 1349
MboI GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
MboII GAAGA 7 cut(s) 112, 289, 822, 857, 1004, 1086, 1281
MfeI CAATTG 3 cut(s) 182, 762, 996
MhlI GDGCHC 1 cut(s) 324
MlsI TGGCCA 1 cut(s) 1304
MluCI AATT 9 cut(s) 26, 182, 762, 904, 924, 996, 1021, 1126, 1233
MluNI TGGCCA 1 cut(s) 1304
Mly113I GGCGCC 3 cut(s) 114, 147, 222
MlyI GAGTC 1 cut(s) 302
MmeI TCCRAC 3 cut(s) 35, 631, 867
Mox20I TGGCCA 1 cut(s) 1304
MroNI GCCGGC 2 cut(s) 86, 166
MroXI GAANNNNTTC 1 cut(s) 704
MscI TGGCCA 1 cut(s) 1304
MseI TTAA 2 cut(s) 357, 635
MslI CAYNNNNRTG 2 cut(s) 248, 441
Msp20I TGGCCA 1 cut(s) 1304
MspA1I CMGCKG 3 cut(s) 52, 72, 1205
MspI CCGG 9 cut(s) 87, 111, 150, 167, 259, 294, 328, 411, 615
MspR9I CCNGG 2 cut(s) 198, 341
MunI CAATTG 3 cut(s) 182, 762, 996
MvaI CCWGG 2 cut(s) 198, 341
MvnI CGCG 5 cut(s) 101, 270, 482, 484, 546
MwoI GCNNNNNNNGC 8 cut(s) 64, 96, 167, 517, 611, 620, 1175, 1211
NaeI GCCGGC 2 cut(s) 88, 168
NarI GGCGCC 3 cut(s) 114, 147, 222
NdeII GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
NgoMIV GCCGGC 2 cut(s) 86, 166
NlaIII CATG 7 cut(s) 25, 160, 253, 373, 388, 397, 1232
NlaIV GGNNCC 8 cut(s) 38, 115, 148, 223, 322, 332, 431, 1123
NmeAIII GCCGAG 1 cut(s) 345
NmuCI GTSAC 2 cut(s) 813, 1313
NspI RCATGY 1 cut(s) 373
OliI CACNNNNGTG 1 cut(s) 441
PaeI GCATGC 1 cut(s) 373
PceI AGGCCT 1 cut(s) 201
PciSI GCTCTTC 1 cut(s) 835
PcsI WCGNNNNNNNCGW 1 cut(s) 372
PdiI GCCGGC 2 cut(s) 88, 168
PdmI GAANNNNTTC 1 cut(s) 704
PfeI GAWTC 7 cut(s) 7, 153, 193, 236, 486, 551, 1077
PkrI GCNGC 9 cut(s) 54, 57, 71, 74, 172, 1096, 1177, 1207, 1351
PleI GAGTC 1 cut(s) 302
PluTI GGCGCC 3 cut(s) 117, 150, 225
PpsI GAGTC 1 cut(s) 302
Ppu21I YACGTR 1 cut(s) 417
Psp1406I AACGTT 1 cut(s) 884
Psp6I CCWGG 2 cut(s) 196, 339
PspFI CCCAGC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 196, 339
PspN4I GGNNCC 8 cut(s) 38, 115, 148, 223, 322, 332, 431, 1123
PspOMI GGGCCC 1 cut(s) 320
PspPI GGNCC 7 cut(s) 36, 160, 320, 321, 430, 477, 682
PsrI GAACNNNNNNTAC 2 cut(s) 802, 834
PvuII CAGCTG 1 cut(s) 1205
RsaI GTAC 4 cut(s) 290, 415, 807, 897
RsaNI GTAC 4 cut(s) 289, 414, 806, 896
RseI CAYNNNNRTG 2 cut(s) 248, 441
SapI GCTCTTC 1 cut(s) 835
SaqAI TTAA 2 cut(s) 357, 635
SatI GCNGC 9 cut(s) 53, 56, 70, 73, 171, 1095, 1176, 1206, 1350
Sau3AI GATC 7 cut(s) 210, 387, 606, 877, 916, 1179, 1272
Sau96I GGNCC 7 cut(s) 36, 160, 320, 321, 430, 477, 682
SchI GAGTC 1 cut(s) 302
ScrFI CCNGG 2 cut(s) 198, 341
SduI GDGCHC 1 cut(s) 324
SfaNI GCATC 4 cut(s) 657, 698, 972, 1138
SfcI CTRYAG 1 cut(s) 1333
SfiI GGCCNNNNNGGCC 1 cut(s) 167
SfoI GGCGCC 3 cut(s) 115, 148, 223
SinI GGWCC 4 cut(s) 36, 430, 477, 682
SmiMI CAYNNNNRTG 2 cut(s) 248, 441
SmlI CTYRAG 1 cut(s) 677
SmoI CTYRAG 1 cut(s) 677
SpeI ACTAGT 1 cut(s) 1255
SphI GCATGC 1 cut(s) 373
Sse9I AATT 9 cut(s) 26, 182, 762, 904, 924, 996, 1021, 1126, 1233
SseBI AGGCCT 1 cut(s) 201
SsiI CCGC 7 cut(s) 34, 50, 72, 171, 480, 590, 1349
SspDI GGCGCC 3 cut(s) 113, 146, 221
SspMI CTAG 4 cut(s) 776, 1256, 1293, 1311
StuI AGGCCT 1 cut(s) 201
StyD4I CCNGG 2 cut(s) 196, 339
TaaI ACNGT 4 cut(s) 80, 628, 663, 1300
TaiI ACGT 3 cut(s) 419, 815, 887
TaqI TCGA 4 cut(s) 93, 246, 275, 1072
TasI AATT 9 cut(s) 26, 182, 762, 904, 924, 996, 1021, 1126, 1233
TatI WGTACW 1 cut(s) 895
TauI GCSGC 3 cut(s) 75, 173, 1352
TfiI GAWTC 7 cut(s) 7, 153, 193, 236, 486, 551, 1077
Tru1I TTAA 2 cut(s) 357, 635
Tru9I TTAA 2 cut(s) 357, 635
TscAI CASTG 3 cut(s) 85, 633, 1305
TseFI GTSAC 2 cut(s) 813, 1313
TseI GCWGC 6 cut(s) 52, 55, 69, 1094, 1175, 1205
Tsp45I GTSAC 2 cut(s) 813, 1313
TspDTI ATGAA 4 cut(s) 38, 543, 746, 809
TspGWI ACGGA 4 cut(s) 248, 437, 823, 1174
TspRI CASTG 3 cut(s) 85, 633, 1305
VpaK11BI GGWCC 4 cut(s) 36, 430, 477, 682
XagI CCTNNNNNAGG 1 cut(s) 338
XapI RAATTY 3 cut(s) 26, 904, 924
XceI RCATGY 1 cut(s) 373
XmiI GTMKAC 2 cut(s) 381, 780
XmnI GAANNNNTTC 1 cut(s) 704
XspI CTAG 4 cut(s) 776, 1256, 1293, 1311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.