MD16G1053900.v1.1

sodium-coupled neutral amino acid transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0000616
Physical Location & Seq
Forward (+)
3814621 .. 3817479
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1053900.v1.1.491

Sequence Viewer

Length: 1374 bp
ATGACCACTGACAGCAAAAATCCCAGGAATCCAACAAAATGGAAGCAACCTACGAACGAGGATTCTCCGCTGCTACCAAGGCGGACGGACCAAGATGATGAGCCGGCAGCGGGGGAGTTTAATGGGGCATCTTTCACCGGCGCGGTGTTTAATCTGTCGACCACCATTATTGGCGCCGGGATTATGGCGCTGCCGGCCACCATGAAAGTGTTGGGACTCGGCGTTGGGATTGGGATGATCGTGTTTGTGGCGGTTCTGACGGAGGCGTCGGTGGAGATGCTGCTGAGGTTCAGTAGGGTCGGGAAGGCTACGACTTTTGGAGGGGTGATGGGGGATGCTTTTGGGAAAGCTGGGAAAGTTGTGTTTCAGCTGTGCATCTTGGTTAACAATCTTGGAACCCTCATCGTCTACATGATCATCATTGGTGACGTGCTTTCCGGAACTTCTTCAACTGGAGTTCACCATGCTGGGGTGTTAGAAGGCTGGTTTGGTGAACACTGGTGGAACGGGCGCACCTTCGTGCTGCTCGTCGCAACCATTTTCGTGTTTGCTCCATTGGCATCGTTGAAGCGAATAGATTCGTTGAGATACACATCCGCTTTAGCAGTTGCGCTGGCGATTGTTTTTCTTGTTATTACTGCAGGAATTGTAGTTACTAAACTCTTTTACGGAGGTATTTCCATGCCCAGGCTCCTCCCTAACGTGTCGGATATTGCTTCTGTGTGGAATCTCTTCACAGTTGTTCCTGTCCTTGTGACGGCCTTCATCTGCCACTTCAACGTGCATACTATCGACAATGAGCTCGGAGACACTTCCTTGATTCAACCAATTGTAAAGACATCATTGGCTTTGTGCTCTACTGTCTACATTCTGACCAGCTTTTTCGGTTTCCTCCTATTCGGGGACTCAACTCTTGACGATGTGCTAGCCAATTTCGACACCAACCTTGGCATCCCTTACAGCTTTTTGCTCAATGATATCGTTCGCATCAGCTATGCCCTCCACCTCATGCTTGTTTTTCCCGTTATTTTCCATCCACTGCGACTCAACTTGGATGACCTCCTCTTTCCTTCGTCTAGGCCTCTGGTTTCCGACAATTGTAGGTTTACATTAAGCACCATCGGACTAATTTCTCTCGTCTTCTTGGGCGCAAATTTTATTCCCAGCATCTGGGATGTTTTCCAGTTCTCTGGAGCGACCGCTACAGTCTGCATCGGATTCATCTTTCCTGCTGCCATCGCTCTAAGGGACAAACATGGCATTGCAACAACGAAGGACAAGGTCTTATCCGTTTTCATGATCTGTCTTGCTGTGTTTGCGAATCTGATAGCGATATACAGCAATGCTACTGCCTTGTTCAAAGAGAAGGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04724 ko04727 ko04974 map04724 map04727 map04974
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

458

Amino Acids

49.42

Weight (kDa)

6.44

Isoelectric Point (pI)

22.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 43 - 447 2e-55 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000616)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G30390 AT3G30390 AT3G30390 AT5G38820 AT5G38820 AT5G38820
fragaria_vesca FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_2g32550 FvH4_4g28960 FvH4_6g46060 FvH4_6g46060 FvH4_6g46080
malus_domestica MD09G1077200.v1.1 MD09G1077400.v1.1 MD15G1064300.v1.1 MD16G1053900.v1.1 MD17G1067600.v1.1 MD17G1067800.v1.1
prunus_persica Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G295800_v2.0.a1 Prupe.1G418300_v2.0.a1 Prupe.3G246600_v2.0.a1 Prupe.3G246800_v2.0.a1 Prupe.3G246900_v2.0.a1
pyrus_communis pycom09g00430 pycom09g00450 pycom15g06100 pycom16g04690 pycom17g06820
rosa_chinensis RchiOBHm_Chr2g0164381 RchiOBHm_Chr2g0164401 RchiOBHm_Chr4g0437101 RchiOBHm_Chr6g0310121
rosa_laevigata RLG00000006468 RLG00000010508 RLG00000021456 RLG00000021458
rosa_multiflora Rmu_co8348867.1_g000001 Rmu_sc0000294.1_g000029 Rmu_sc0009487.1_g000003 Rmu_sc0018759.1_g000001 Rmu_sc0021401.1_g000003 Rmu_ssc0000006.1_g000009
rosa_roxburghii Rroxscaffold_2G00086590 Rroxscaffold_2G00086610 Rroxscaffold_5G00378170 Rroxscaffold_7G00158840
rosa_rugosa Rorug02G0508200 Rorug02G0508300 Rorug04G0298000 Rorug06G0377600
rosa_samantha Rh2AG576200 Rh2AG576400 Rh2BG587200 Rh2BG587400 Rh2CG558000 Rh2CG558200 Rh2DG596900 Rh2DG597200 Rh4AG352800 Rh4BG362300 Rh4CG376500 Rh4DG356300 Rh6AG491600 Rh6BG501000 Rh6CG506000 Rh6DG492100
rosa_wichuraiana Rw2G047720 Rw2G047740 Rw2G047820 Rw2G047840 Rw4G030890 Rw6G042770

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 265
AccB1I GGYRCC 1 cut(s) 173
AccB7I CCANNNNNTGG 1 cut(s) 1170
AccI GTMKAC 3 cut(s) 158, 408, 864
AccII CGCG 1 cut(s) 143
AccIII TCCGGA 1 cut(s) 437
AciI CCGC 7 cut(s) 68, 82, 110, 143, 251, 597, 1200
AcoI YGGCCR 1 cut(s) 195
AcsI RAATTY 1 cut(s) 1153
AcyI GRCGYC 2 cut(s) 174, 266
AfiI CCNNNNNNNGG 6 cut(s) 110, 469, 687, 757, 901, 1170
AflIII ACRYGT 1 cut(s) 702
AgsI TTSAA 5 cut(s) 450, 568, 778, 824, 1360
AjiI CACGTC 1 cut(s) 430
AjnI CCWGG 2 cut(s) 23, 686
AjuI GAANNNNNNNTTGG 2 cut(s) 471, 503
AleI CACNNNNGTG 1 cut(s) 518
AluBI AGCT 6 cut(s) 350, 370, 802, 879, 963, 993
AluI AGCT 6 cut(s) 350, 370, 802, 879, 963, 993
Alw21I GWGCWC 2 cut(s) 804, 857
Alw26I GTCTC 1 cut(s) 801
AlwNI CAGNNNCTG 1 cut(s) 1170
Aor13HI TCCGGA 1 cut(s) 437
AoxI GGCC 3 cut(s) 195, 759, 1079
ApeKI GCWGC 6 cut(s) 70, 107, 190, 280, 523, 1232
ApoI RAATTY 1 cut(s) 1153
Asp700I GAANNNNTTC 3 cut(s) 445, 577, 731
AspLEI GCGC 6 cut(s) 143, 176, 190, 513, 613, 1151
AspS9I GGNCC 1 cut(s) 88
AsuC2I CCSGG 1 cut(s) 178
AsuHPI GGTGA 5 cut(s) 127, 337, 437, 452, 503
AsuNHI GCTAGC 1 cut(s) 925
AvaII GGWCC 1 cut(s) 88
BanI GGYRCC 1 cut(s) 173
BanII GRGCYC 1 cut(s) 804
BbsI GAAGAC 1 cut(s) 1132
Bbv12I GWGCWC 2 cut(s) 804, 857
BbvCI CCTCAGC 1 cut(s) 284
BbvI GCAGC 6 cut(s) 57, 119, 177, 267, 510, 1219
BccI CCATC 4 cut(s) 322, 1041, 1127, 1244
BceAI ACGGC 1 cut(s) 774
BciT130I CCWGG 2 cut(s) 25, 688
BclI TGATCA 1 cut(s) 414
BcnI CCSGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 801
BfaI CTAG 2 cut(s) 926, 1077
BfmI CTRYAG 2 cut(s) 639, 1203
BfoI RGCGCY 2 cut(s) 177, 191
BisI GCNGC 6 cut(s) 71, 108, 191, 281, 524, 1233
BlsI GCNGC 6 cut(s) 72, 109, 192, 282, 525, 1234
Bme1390I CCNGG 3 cut(s) 25, 178, 688
Bme18I GGWCC 1 cut(s) 88
BmgBI CACGTC 1 cut(s) 430
BmgT120I GGNCC 1 cut(s) 88
BmiI GGNNCC 3 cut(s) 175, 397, 692
BmrFI CCNGG 3 cut(s) 25, 178, 688
BmsI GCATC 9 cut(s) 137, 267, 325, 384, 569, 960, 996, 1176, 1221
BmtI GCTAGC 1 cut(s) 929
BpiI GAAGAC 1 cut(s) 1132
BpmI CTGGAG 2 cut(s) 474, 1212
Bpu10I CCTNAGC 1 cut(s) 284
BpuMI CCSGG 1 cut(s) 178
BsaBI GATNNNNATC 1 cut(s) 592
BsaHI GRCGYC 2 cut(s) 174, 266
BsaJI CCNNGG 4 cut(s) 23, 77, 686, 946
BsaWI WCCGGW 1 cut(s) 437
Bsc4I CCNNNNNNNGG 6 cut(s) 110, 469, 687, 757, 901, 1170
Bse118I RCCGGY 3 cut(s) 103, 137, 193
Bse1I ACTGG 3 cut(s) 457, 503, 1183
Bse3DI GCAATG 2 cut(s) 1260, 1348
Bse8I GATNNNNATC 1 cut(s) 592
BseAI TCCGGA 1 cut(s) 437
BseBI CCWGG 2 cut(s) 25, 688
BseDI CCNNGG 4 cut(s) 23, 77, 686, 946
BseGI GGATG 7 cut(s) 240, 340, 593, 951, 1033, 1060, 1180
BseJI GATNNNNATC 1 cut(s) 592
BseLI CCNNNNNNNGG 6 cut(s) 110, 469, 687, 757, 901, 1170
BseMI GCAATG 2 cut(s) 1260, 1348
BseMII CTCAG 1 cut(s) 275
BseNI ACTGG 3 cut(s) 457, 503, 1183
BseRI GAGGAG 2 cut(s) 683, 1052
BseXI GCAGC 6 cut(s) 57, 119, 177, 267, 510, 1219
BseYI CCCAGC 3 cut(s) 350, 467, 1163
Bsh1236I CGCG 1 cut(s) 143
Bsh1285I CGRYCG 1 cut(s) 1200
BshFI GGCC 3 cut(s) 197, 761, 1081
BshNI GGYRCC 1 cut(s) 173
BsiEI CGRYCG 1 cut(s) 1200
BsiHKAI GWGCWC 2 cut(s) 804, 857
BsiSI CCGG 5 cut(s) 104, 138, 177, 194, 438
BslFI GGGAC 3 cut(s) 228, 917, 1262
BslI CCNNNNNNNGG 6 cut(s) 110, 469, 687, 757, 901, 1170
BsmAI GTCTC 1 cut(s) 801
BsmFI GGGAC 3 cut(s) 228, 917, 1262
BsnI GGCC 3 cut(s) 197, 761, 1081
Bsp1286I GDGCHC 2 cut(s) 804, 857
Bsp13I TCCGGA 1 cut(s) 437
Bsp143I GATC 3 cut(s) 237, 414, 1299
BspACI CCGC 7 cut(s) 68, 82, 110, 143, 251, 597, 1200
BspANI GGCC 3 cut(s) 197, 761, 1081
BspCNI CTCAG 1 cut(s) 276
BspEI TCCGGA 1 cut(s) 437
BspFNI CGCG 1 cut(s) 143
BspHI TCATGA 1 cut(s) 1296
BspLI GGNNCC 3 cut(s) 175, 397, 692
BspMAI CTGCAG 1 cut(s) 643
BspOI GCTAGC 1 cut(s) 929
BspT107I GGYRCC 1 cut(s) 173
BsrDI GCAATG 2 cut(s) 1260, 1348
BsrFI RCCGGY 3 cut(s) 103, 137, 193
BsrI ACTGG 3 cut(s) 457, 503, 1183
BssAI RCCGGY 3 cut(s) 103, 137, 193
BssECI CCNNGG 4 cut(s) 23, 77, 686, 946
BssMI GATC 3 cut(s) 237, 414, 1299
BssNI GRCGYC 2 cut(s) 174, 266
BssT1I CCWWGG 2 cut(s) 77, 946
Bst2UI CCWGG 2 cut(s) 25, 688
Bst4CI ACNGT 3 cut(s) 739, 862, 1207
Bst6I CTCTTC 1 cut(s) 737
BstACI GRCGYC 2 cut(s) 174, 266
BstC8I GCNNGC 4 cut(s) 105, 195, 615, 927
BstDEI CTNAG 2 cut(s) 284, 1244
BstF5I GGATG 7 cut(s) 240, 340, 593, 951, 1033, 1060, 1180
BstFNI CGCG 1 cut(s) 143
BstH2I RGCGCY 2 cut(s) 177, 191
BstHHI GCGC 6 cut(s) 143, 176, 190, 513, 613, 1151
BstKTI GATC 3 cut(s) 240, 417, 1302
BstMAI GTCTC 1 cut(s) 801
BstMBI GATC 3 cut(s) 237, 414, 1299
BstMCI CGRYCG 1 cut(s) 1200
BstMWI GCNNNNNNNGC 5 cut(s) 79, 194, 557, 1238, 1316
BstNI CCWGG 2 cut(s) 25, 688
BstSCI CCNGG 3 cut(s) 23, 176, 686
BstSFI CTRYAG 2 cut(s) 639, 1203
BstUI CGCG 1 cut(s) 143
BstV1I GCAGC 6 cut(s) 57, 119, 177, 267, 510, 1219
BstV2I GAAGAC 1 cut(s) 1132
BstXI CCANNNNNNTGG 2 cut(s) 39, 1190
BsuRI GGCC 3 cut(s) 197, 761, 1081
BtgZI GCGATG 1 cut(s) 1222
BtrI CACGTC 1 cut(s) 430
BtsCI GGATG 7 cut(s) 240, 340, 593, 951, 1033, 1060, 1180
BtsI GCAGTG 1 cut(s) 1037
BtsIMutI CAGTG 3 cut(s) 6, 496, 1037
Cac8I GCNNGC 4 cut(s) 105, 195, 615, 927
CaiI CAGNNNCTG 1 cut(s) 1170
CciI TCATGA 1 cut(s) 1296
CfoI GCGC 6 cut(s) 143, 176, 190, 513, 613, 1151
Cfr10I RCCGGY 3 cut(s) 103, 137, 193
Cfr13I GGNCC 1 cut(s) 88
CseI GACGC 1 cut(s) 255
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviAII CATG 7 cut(s) 202, 412, 464, 682, 1009, 1256, 1297
DdeI CTNAG 2 cut(s) 284, 1244
DinI GGCGCC 1 cut(s) 175
DpnI GATC 3 cut(s) 239, 416, 1301
DpnII GATC 3 cut(s) 237, 414, 1299
DrdI GACNNNNNNGTC 1 cut(s) 265
DseDI GACNNNNNNGTC 1 cut(s) 265
EaeI YGGCCR 1 cut(s) 195
Eam1104I CTCTTC 1 cut(s) 737
EarI CTCTTC 1 cut(s) 737
EciI GGCGGA 1 cut(s) 97
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 2 cut(s) 77, 946
Eco147I AGGCCT 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 804
Eco32I GATATC 1 cut(s) 979
Eco47I GGWCC 1 cut(s) 88
Eco53kI GAGCTC 1 cut(s) 802
EcoICRI GAGCTC 1 cut(s) 802
EcoRII CCWGG 2 cut(s) 23, 686
EcoRV GATATC 1 cut(s) 979
EcoT14I CCWWGG 2 cut(s) 77, 946
EcoT38I GRGCYC 1 cut(s) 804
EgeI GGCGCC 1 cut(s) 175
EheI GGCGCC 1 cut(s) 175
ErhI CCWWGG 2 cut(s) 77, 946
FaeI CATG 7 cut(s) 205, 415, 467, 685, 1012, 1259, 1300
FaqI GGGAC 3 cut(s) 228, 917, 1262
FatI CATG 7 cut(s) 201, 411, 463, 681, 1008, 1255, 1296
FauI CCCGC 1 cut(s) 103
FbaI TGATCA 1 cut(s) 414
FblI GTMKAC 3 cut(s) 158, 408, 864
Fnu4HI GCNGC 6 cut(s) 71, 108, 191, 281, 524, 1233
FokI GGATG 7 cut(s) 247, 347, 580, 938, 1020, 1067, 1187
FriOI GRGCYC 1 cut(s) 804
Fsp4HI GCNGC 6 cut(s) 71, 108, 191, 281, 524, 1233
FspBI CTAG 2 cut(s) 926, 1077
GlaI GCGC 6 cut(s) 142, 175, 189, 512, 612, 1150
GluI GCNGC 6 cut(s) 71, 108, 191, 281, 524, 1233
GsaI CCCAGC 3 cut(s) 354, 471, 1167
GsuI CTGGAG 2 cut(s) 474, 1212
HaeII RGCGCY 2 cut(s) 177, 191
HaeIII GGCC 3 cut(s) 197, 761, 1081
HapII CCGG 5 cut(s) 104, 138, 177, 194, 438
HgaI GACGC 1 cut(s) 255
HhaI GCGC 6 cut(s) 143, 176, 190, 513, 613, 1151
Hin1I GRCGYC 2 cut(s) 174, 266
Hin1II CATG 7 cut(s) 205, 415, 467, 685, 1012, 1259, 1300
Hin6I GCGC 6 cut(s) 141, 174, 188, 511, 611, 1149
HinP1I GCGC 6 cut(s) 141, 174, 188, 511, 611, 1149
HincII GTYRAC 2 cut(s) 159, 385
HindII GTYRAC 2 cut(s) 159, 385
HpaI GTTAAC 1 cut(s) 385
HpaII CCGG 5 cut(s) 104, 138, 177, 194, 438
HphI GGTGA 5 cut(s) 127, 337, 437, 452, 503
Hpy166II GTNNAC 7 cut(s) 159, 385, 409, 460, 494, 865, 1107
Hpy188I TCNGA 8 cut(s) 258, 709, 806, 873, 1093, 1124, 1217, 1326
Hpy188III TCNNGA 5 cut(s) 301, 438, 914, 1191, 1297
Hpy8I GTNNAC 7 cut(s) 159, 385, 409, 460, 494, 865, 1107
Hpy99I CGWCG 2 cut(s) 271, 533
HpyAV CCTTC 7 cut(s) 298, 473, 526, 772, 1080, 1267, 1360
HpyCH4III ACNGT 3 cut(s) 739, 862, 1207
HpyCH4IV ACGT 3 cut(s) 429, 702, 780
HpyCH4V TGCA 5 cut(s) 375, 641, 784, 1212, 1265
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 194, 557, 1238, 1316
HpyF3I CTNAG 2 cut(s) 284, 1244
HpySE526I ACGT 3 cut(s) 429, 702, 780
Hsp92I GRCGYC 2 cut(s) 174, 266
Hsp92II CATG 7 cut(s) 205, 415, 467, 685, 1012, 1259, 1300
HspAI GCGC 6 cut(s) 141, 174, 188, 511, 611, 1149
KasI GGCGCC 1 cut(s) 173
Kpn2I TCCGGA 1 cut(s) 437
KroI GCCGGC 2 cut(s) 103, 193
KroNI GCCGGC 2 cut(s) 105, 195
Ksp22I TGATCA 1 cut(s) 414
KspAI GTTAAC 1 cut(s) 385
Kzo9I GATC 3 cut(s) 237, 414, 1299
LmnI GCTCC 3 cut(s) 556, 696, 1193
Lsp1109I GCAGC 6 cut(s) 57, 119, 177, 267, 510, 1219
LweI GCATC 9 cut(s) 137, 267, 325, 384, 569, 960, 996, 1176, 1221
MaeI CTAG 2 cut(s) 926, 1077
MaeII ACGT 3 cut(s) 429, 702, 780
MaeIII GTNAC 3 cut(s) 425, 652, 754
MalI GATC 3 cut(s) 239, 416, 1301
MboI GATC 3 cut(s) 237, 414, 1299
MboII GAAGA 3 cut(s) 438, 724, 1132
MfeI CAATTG 2 cut(s) 828, 1096
MhlI GDGCHC 2 cut(s) 804, 857
MluCI AATT 6 cut(s) 645, 828, 931, 1096, 1128, 1153
Mly113I GGCGCC 1 cut(s) 174
MlyI GAGTC 3 cut(s) 210, 899, 1038
MmeI TCCRAC 3 cut(s) 56, 687, 1116
MroI TCCGGA 1 cut(s) 437
MroNI GCCGGC 2 cut(s) 103, 193
MroXI GAANNNNTTC 3 cut(s) 445, 577, 731
MseI TTAA 4 cut(s) 120, 150, 384, 1112
MslI CAYNNNNRTG 3 cut(s) 206, 518, 542
MspA1I CMGCKG 3 cut(s) 70, 110, 370
MspI CCGG 5 cut(s) 104, 138, 177, 194, 438
MspR9I CCNGG 3 cut(s) 25, 178, 688
MunI CAATTG 2 cut(s) 828, 1096
MvaI CCWGG 2 cut(s) 25, 688
MvnI CGCG 1 cut(s) 143
MwoI GCNNNNNNNGC 5 cut(s) 79, 194, 557, 1238, 1316
NaeI GCCGGC 2 cut(s) 105, 195
NarI GGCGCC 1 cut(s) 174
NciI CCSGG 1 cut(s) 178
NdeII GATC 3 cut(s) 237, 414, 1299
NgoMIV GCCGGC 2 cut(s) 103, 193
NheI GCTAGC 1 cut(s) 925
NlaIII CATG 7 cut(s) 205, 415, 467, 685, 1012, 1259, 1300
NlaIV GGNNCC 3 cut(s) 175, 397, 692
NmeAIII GCCGAG 1 cut(s) 198
NmuCI GTSAC 2 cut(s) 425, 754
OliI CACNNNNGTG 1 cut(s) 518
PagI TCATGA 1 cut(s) 1296
PceI AGGCCT 1 cut(s) 1081
PcsI WCGNNNNNNNCGW 1 cut(s) 525
PdiI GCCGGC 2 cut(s) 105, 195
PdmI GAANNNNTTC 3 cut(s) 445, 577, 731
PfeI GAWTC 7 cut(s) 28, 62, 578, 727, 820, 1218, 1321
PflFI GACNNNGTC 1 cut(s) 1280
PflMI CCANNNNNTGG 1 cut(s) 1170
PkrI GCNGC 6 cut(s) 72, 109, 192, 282, 525, 1234
PleI GAGTC 3 cut(s) 210, 899, 1038
PluTI GGCGCC 1 cut(s) 177
PpsI GAGTC 3 cut(s) 210, 899, 1038
Psp124BI GAGCTC 1 cut(s) 804
Psp6I CCWGG 2 cut(s) 23, 686
PspFI CCCAGC 3 cut(s) 350, 467, 1163
PspGI CCWGG 2 cut(s) 23, 686
PspN4I GGNNCC 3 cut(s) 175, 397, 692
PspPI GGNCC 1 cut(s) 88
PstI CTGCAG 1 cut(s) 643
PstNI CAGNNNCTG 1 cut(s) 1170
PsyI GACNNNGTC 1 cut(s) 1280
PvuII CAGCTG 1 cut(s) 370
RseI CAYNNNNRTG 3 cut(s) 206, 518, 542
SacI GAGCTC 1 cut(s) 804
SalI GTCGAC 1 cut(s) 157
SaqAI TTAA 4 cut(s) 120, 150, 384, 1112
SatI GCNGC 6 cut(s) 71, 108, 191, 281, 524, 1233
Sau3AI GATC 3 cut(s) 237, 414, 1299
Sau96I GGNCC 1 cut(s) 88
SchI GAGTC 3 cut(s) 210, 899, 1038
ScrFI CCNGG 3 cut(s) 25, 178, 688
SduI GDGCHC 2 cut(s) 804, 857
SfaNI GCATC 9 cut(s) 137, 267, 325, 384, 569, 960, 996, 1176, 1221
SfcI CTRYAG 2 cut(s) 639, 1203
SfoI GGCGCC 1 cut(s) 175
SgrAI CRCCGGYG 1 cut(s) 137
SinI GGWCC 1 cut(s) 88
SmiMI CAYNNNNRTG 3 cut(s) 206, 518, 542
Sse9I AATT 6 cut(s) 645, 828, 931, 1096, 1128, 1153
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 7 cut(s) 68, 82, 110, 143, 251, 597, 1200
SspDI GGCGCC 1 cut(s) 173
SspMI CTAG 2 cut(s) 926, 1077
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 3 cut(s) 23, 176, 686
StyI CCWWGG 2 cut(s) 77, 946
TaaI ACNGT 3 cut(s) 739, 862, 1207
TaiI ACGT 3 cut(s) 432, 705, 783
TaqI TCGA 3 cut(s) 158, 792, 936
TasI AATT 6 cut(s) 645, 828, 931, 1096, 1128, 1153
TfiI GAWTC 7 cut(s) 28, 62, 578, 727, 820, 1218, 1321
Tru1I TTAA 4 cut(s) 120, 150, 384, 1112
Tru9I TTAA 4 cut(s) 120, 150, 384, 1112
TscAI CASTG 3 cut(s) 13, 503, 1044
TseFI GTSAC 2 cut(s) 425, 754
TseI GCWGC 6 cut(s) 70, 107, 190, 280, 523, 1232
Tsp45I GTSAC 2 cut(s) 425, 754
TspDTI ATGAA 4 cut(s) 218, 754, 1210, 1285
TspGWI ACGGA 4 cut(s) 101, 275, 684, 1279
TspRI CASTG 3 cut(s) 13, 503, 1044
Tth111I GACNNNGTC 1 cut(s) 1280
Van91I CCANNNNNTGG 1 cut(s) 1170
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 1 cut(s) 1153
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XmiI GTMKAC 3 cut(s) 158, 408, 864
XmnI GAANNNNTTC 3 cut(s) 445, 577, 731
XspI CTAG 2 cut(s) 926, 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.