Prupe.3G246900_v2.0.a1

Sodium-coupled neutral amino acid transporter 4-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
23797312 .. 23800181
2870 bp
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UTR
Exon/CDS
Intron
Prupe.3G246900.1

Sequence Viewer

Length: 1347 bp
ATGAGTACATCACAAAGTGAACACCAATTGGTTGATGAGAGGACCCTTTTGTTGCCCACAAGCCAAAATGAAGAAGCTCAGGCTGGGTTTGGCAAACCCAGCAGAAGAGCTTCTTTTCCTGGGTCTGTGTTCAATTTGTCCTGCACAGTTATTGGTTCTGGAATTATGAGCCTGCCTGCTACCTTGAACATATTGGGGCTCATCCCAGGGGTTGCTTTGATCATCATAGCTGCATTCTTAACAGAAGCATCAATTGATTTTTTGCTGAGATTCAGCAAGCCTGGTTCAGCATTTTCTTATGGTGATGTCATGGGTGAAGCCTTTGGAAAAGTTGGGAAGTATTTGCTTCAGAGCTGTGTTATAATCAACAATATTGGTTCTCTTACTGTGTATATGATCATAATAGAGGATGTGCTTTCTGGCTCAACTTCAAATGGAGTTCACCATGCTGGTATTTTGGAAGAAAGCTTAGGGGTACATTGGTGGACTGGACGTGCTTTCGTTCTTATTGTCCTTACTGTTGTCGTAATTGTTCCATTGATATGTTTTAAGCGCATTGATTCACTGAGGTTCACATCAGCTATATCAATTACGCTGGCAGTTGTTTTTCTTGTTGCTGTCATCGTAATCACAGTGTACAAATTAATACTGGGAAGCATAGAAGCACCTGCATTGTTTCCTAGTGTTACTGGTCTGACTTCCTTTCTAAATCTCTTCACTGCATTTCCTGTTGTGGTTTTTGCTTATGTCTGCCACTACAATGTTCATAGCATACAAAATGAGCTTGAAGATTCTCGAAGGATGCCAGCCATTGTGCAGACTACAGTTGCTCTCTGTGCCTTTGTGTATGTGATGACTGGCGTGTTCGGGTTCCTCCTGTTTGGTGAATCAACTCTTTCTGACCTGCTCTCCAACTTTGACACAGACCTTGGCATTCCATACAGCTCTGTCTTCAACGATATAGTTCGTATAAGTTACGCGGGCCACATCTTACTTGTATATCCCATTATTCTTTTTCCCCTGCGCCTTAACTTGGACGGCCTTCTCTTCCCCTCAGCCAGACCGTTGGCTTCGGACAACGTGAGGTTTTTGTTGATCAGCTCAGGGATCATTGTCATCACCCTCTTGGGTGCAATATTCATACCAAGCATATGGGTGGCTTTTGAGTTCACTGGAGCAACTGTTGGAGCTTTACTTGCATTCATCTTTCCTGCTTGCATTGTTCTCAAGGACCCTCATGGCATAGCATGGAAGAAGGACAAGATTTTGTCTGTCTTCATGATCATTGTTGCTGTAGTGTCTAGTGTGGTAGCCATTTACAGTGATGCATATTCATTATTGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

449

Amino Acids

48.39

Weight (kDa)

5.74

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000616)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 362
AarI CACCTGC 1 cut(s) 676
Acc36I ACCTGC 2 cut(s) 676, 912
AccII CGCG 1 cut(s) 980
AciI CCGC 1 cut(s) 980
AclWI GGATC 1 cut(s) 1115
AcuI CTGAAG 1 cut(s) 332
AdeI CACNNNGTG 1 cut(s) 17
AfaI GTAC 3 cut(s) 7, 477, 638
AfiI CCNNNNNNNGG 1 cut(s) 1033
AgsI TTSAA 5 cut(s) 133, 187, 432, 788, 955
AjiI CACGTC 1 cut(s) 494
AjnI CCWGG 3 cut(s) 118, 205, 280
AlwI GGATC 1 cut(s) 1115
AoxI GGCC 2 cut(s) 982, 1039
ApeKI GCWGC 1 cut(s) 230
AseI ATTAAT 1 cut(s) 644
Asp700I GAANNNNTTC 1 cut(s) 109
AspLEI GCGC 2 cut(s) 555, 1026
AspS9I GGNCC 3 cut(s) 42, 982, 1231
AsuHPI GGTGA 5 cut(s) 314, 326, 434, 896, 1111
AvaII GGWCC 2 cut(s) 42, 1231
BaeI ACNNNNGTAYC 2 cut(s) 467, 500
BanII GRGCYC 1 cut(s) 201
BbsI GAAGAC 2 cut(s) 943, 1267
BbvCI CCTCAGC 1 cut(s) 1054
BbvI GCAGC 1 cut(s) 217
BceAI ACGGC 1 cut(s) 1054
BciT130I CCWGG 3 cut(s) 120, 207, 282
BclI TGATCA 4 cut(s) 219, 396, 1095, 1281
BfaI CTAG 2 cut(s) 681, 1302
BfmI CTRYAG 2 cut(s) 822, 1293
BfuAI ACCTGC 2 cut(s) 676, 912
BisI GCNGC 1 cut(s) 231
BlsI GCNGC 1 cut(s) 232
Bme1390I CCNGG 3 cut(s) 120, 207, 282
Bme18I GGWCC 2 cut(s) 42, 1231
BmgBI CACGTC 1 cut(s) 494
BmgT120I GGNCC 3 cut(s) 42, 982, 1231
BmiI GGNNCC 3 cut(s) 44, 872, 1233
BmrFI CCNGG 3 cut(s) 120, 207, 282
BmrI ACTGGG 1 cut(s) 659
BmsI GCATC 3 cut(s) 257, 792, 1315
BmuI ACTGGG 1 cut(s) 659
BpiI GAAGAC 2 cut(s) 943, 1267
BpmI CTGGAG 1 cut(s) 1194
Bpu10I CCTNAGC 4 cut(s) 78, 469, 1054, 1102
BpuEI CTTGAG 1 cut(s) 1211
BsaJI CCNNGG 4 cut(s) 119, 205, 206, 928
BsaXI ACNNNNNCTCC 4 cut(s) 893, 923, 1167, 1197
Bsc4I CCNNNNNNNGG 1 cut(s) 1033
Bse1I ACTGG 5 cut(s) 493, 654, 694, 862, 1177
BseBI CCWGG 3 cut(s) 120, 207, 282
BseDI CCNNGG 4 cut(s) 119, 205, 206, 928
BseGI GGATG 3 cut(s) 201, 415, 807
BseLI CCNNNNNNNGG 1 cut(s) 1033
BseMII CTCAG 5 cut(s) 92, 257, 557, 1068, 1116
BseNI ACTGG 5 cut(s) 493, 654, 694, 862, 1177
BseXI GCAGC 1 cut(s) 217
BseYI CCCAGC 2 cut(s) 83, 98
BsgI GTGCAG 2 cut(s) 127, 836
Bsh1236I CGCG 1 cut(s) 980
BshFI GGCC 2 cut(s) 984, 1041
BslI CCNNNNNNNGG 1 cut(s) 1033
BsmI GAATGC 3 cut(s) 233, 933, 1199
BsnI GGCC 2 cut(s) 984, 1041
Bsp1286I GDGCHC 1 cut(s) 201
Bsp1407I TGTACA 1 cut(s) 636
Bsp143I GATC 5 cut(s) 219, 396, 1095, 1107, 1281
BspACI CCGC 1 cut(s) 980
BspANI GGCC 2 cut(s) 984, 1041
BspCNI CTCAG 5 cut(s) 91, 258, 558, 1067, 1115
BspFNI CGCG 1 cut(s) 980
BspHI TCATGA 1 cut(s) 1278
BspLI GGNNCC 3 cut(s) 44, 872, 1233
BspMI ACCTGC 2 cut(s) 676, 912
BspPI GGATC 1 cut(s) 1115
BspQI GCTCTTC 1 cut(s) 100
BsrGI TGTACA 1 cut(s) 636
BsrI ACTGG 5 cut(s) 493, 654, 694, 862, 1177
BssECI CCNNGG 4 cut(s) 119, 205, 206, 928
BssMI GATC 5 cut(s) 219, 396, 1095, 1107, 1281
BssT1I CCWWGG 1 cut(s) 928
Bst2UI CCWGG 3 cut(s) 120, 207, 282
Bst4CI ACNGT 8 cut(s) 148, 388, 520, 634, 826, 1065, 1183, 1322
Bst6I CTCTTC 3 cut(s) 100, 719, 1052
BstAUI TGTACA 1 cut(s) 636
BstC8I GCNNGC 7 cut(s) 173, 177, 278, 597, 807, 982, 1216
BstDEI CTNAG 6 cut(s) 78, 266, 469, 566, 1054, 1102
BstF5I GGATG 3 cut(s) 201, 415, 807
BstFNI CGCG 1 cut(s) 980
BstHHI GCGC 2 cut(s) 555, 1026
BstKTI GATC 5 cut(s) 222, 399, 1098, 1110, 1284
BstMBI GATC 5 cut(s) 219, 396, 1095, 1107, 1281
BstMWI GCNNNNNNNGC 3 cut(s) 99, 836, 1196
BstNI CCWGG 3 cut(s) 120, 207, 282
BstSCI CCNGG 3 cut(s) 118, 205, 280
BstSFI CTRYAG 2 cut(s) 822, 1293
BstUI CGCG 1 cut(s) 980
BstV1I GCAGC 1 cut(s) 217
BstV2I GAAGAC 2 cut(s) 943, 1267
BstXI CCANNNNNNTGG 2 cut(s) 1066, 1152
BsuRI GGCC 2 cut(s) 984, 1041
BtrI CACGTC 1 cut(s) 494
BtsCI GGATG 3 cut(s) 201, 415, 807
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 5 cut(s) 563, 639, 717, 1170, 1327
BveI ACCTGC 2 cut(s) 676, 912
Cac8I GCNNGC 7 cut(s) 173, 177, 278, 597, 807, 982, 1216
CciI TCATGA 1 cut(s) 1278
CfoI GCGC 2 cut(s) 555, 1026
Cfr13I GGNCC 3 cut(s) 42, 982, 1231
Csp6I GTAC 3 cut(s) 6, 476, 637
CviAII CATG 5 cut(s) 310, 446, 1238, 1248, 1279
CviQI GTAC 3 cut(s) 6, 476, 637
DdeI CTNAG 6 cut(s) 78, 266, 469, 566, 1054, 1102
DpnI GATC 5 cut(s) 221, 398, 1097, 1109, 1283
DpnII GATC 5 cut(s) 219, 396, 1095, 1107, 1281
DraIII CACNNNGTG 1 cut(s) 17
Eam1104I CTCTTC 3 cut(s) 100, 719, 1052
EarI CTCTTC 3 cut(s) 100, 719, 1052
Eco130I CCWWGG 1 cut(s) 928
Eco24I GRGCYC 1 cut(s) 201
Eco47I GGWCC 2 cut(s) 42, 1231
Eco57I CTGAAG 1 cut(s) 332
EcoO109I RGGNCCY 2 cut(s) 42, 1231
EcoRII CCWGG 3 cut(s) 118, 205, 280
EcoT14I CCWWGG 1 cut(s) 928
EcoT22I ATGCAT 1 cut(s) 1330
EcoT38I GRGCYC 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 928
FaeI CATG 5 cut(s) 313, 449, 1241, 1251, 1282
FalI AAGNNNNNCTT 2 cut(s) 97, 129
FatI CATG 5 cut(s) 309, 445, 1237, 1247, 1278
FauI CCCGC 1 cut(s) 973
FauNDI CATATG 1 cut(s) 1151
FbaI TGATCA 4 cut(s) 219, 396, 1095, 1281
Fnu4HI GCNGC 1 cut(s) 231
FokI GGATG 3 cut(s) 188, 422, 814
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 1 cut(s) 231
FspBI CTAG 2 cut(s) 681, 1302
GlaI GCGC 2 cut(s) 554, 1025
GluI GCNGC 1 cut(s) 231
GsaI CCCAGC 2 cut(s) 87, 102
GsuI CTGGAG 1 cut(s) 1194
HaeIII GGCC 2 cut(s) 984, 1041
HhaI GCGC 2 cut(s) 555, 1026
Hin1II CATG 5 cut(s) 313, 449, 1241, 1251, 1282
Hin6I GCGC 2 cut(s) 553, 1024
HinP1I GCGC 2 cut(s) 553, 1024
HindIII AAGCTT 1 cut(s) 466
HinfI GANTC 4 cut(s) 270, 560, 791, 887
HphI GGTGA 5 cut(s) 314, 326, 434, 896, 1111
Hpy166II GTNNAC 6 cut(s) 20, 442, 486, 573, 637, 1170
Hpy188I TCNGA 4 cut(s) 351, 696, 901, 1075
Hpy188III TCNNGA 3 cut(s) 159, 795, 1279
Hpy8I GTNNAC 6 cut(s) 20, 442, 486, 573, 637, 1170
HpyAV CCTTC 3 cut(s) 792, 1052, 1249
HpyCH4III ACNGT 8 cut(s) 148, 388, 520, 634, 826, 1065, 1183, 1322
HpyCH4IV ACGT 2 cut(s) 493, 1080
HpyCH4V TGCA 9 cut(s) 144, 233, 671, 722, 817, 1133, 1199, 1218, 1328
HpyF10VI GCNNNNNNNGC 3 cut(s) 99, 836, 1196
HpyF3I CTNAG 6 cut(s) 78, 266, 469, 566, 1054, 1102
HpySE526I ACGT 2 cut(s) 493, 1080
Hsp92II CATG 5 cut(s) 313, 449, 1241, 1251, 1282
HspAI GCGC 2 cut(s) 553, 1024
Ksp22I TGATCA 4 cut(s) 219, 396, 1095, 1281
Kzo9I GATC 5 cut(s) 219, 396, 1095, 1107, 1281
LguI GCTCTTC 1 cut(s) 100
LmnI GCTCC 2 cut(s) 1175, 1187
Lsp1109I GCAGC 1 cut(s) 217
LweI GCATC 3 cut(s) 257, 792, 1315
MaeI CTAG 2 cut(s) 681, 1302
MaeII ACGT 2 cut(s) 493, 1080
MaeIII GTNAC 2 cut(s) 685, 974
MalI GATC 5 cut(s) 221, 398, 1097, 1109, 1283
MboI GATC 5 cut(s) 219, 396, 1095, 1107, 1281
MboII GAAGA 9 cut(s) 83, 117, 473, 706, 800, 943, 1039, 1264, 1267
MfeI CAATTG 2 cut(s) 26, 252
MhlI GDGCHC 1 cut(s) 201
MluCI AATT 7 cut(s) 26, 133, 162, 252, 528, 588, 641
MmeI TCCRAC 2 cut(s) 936, 1165
MnlI CCTC 8 cut(s) 33, 400, 561, 884, 1063, 1077, 1133, 1245
Mph1103I ATGCAT 1 cut(s) 1330
MroXI GAANNNNTTC 1 cut(s) 109
MseI TTAA 4 cut(s) 239, 549, 644, 1029
MslI CAYNNNNRTG 3 cut(s) 541, 759, 1154
MspR9I CCNGG 3 cut(s) 120, 207, 282
MunI CAATTG 2 cut(s) 26, 252
Mva1269I GAATGC 3 cut(s) 233, 933, 1199
MvaI CCWGG 3 cut(s) 120, 207, 282
MvnI CGCG 1 cut(s) 980
MwoI GCNNNNNNNGC 3 cut(s) 99, 836, 1196
NdeI CATATG 1 cut(s) 1151
NdeII GATC 5 cut(s) 219, 396, 1095, 1107, 1281
NlaIII CATG 5 cut(s) 313, 449, 1241, 1251, 1282
NlaIV GGNNCC 3 cut(s) 44, 872, 1233
NsiI ATGCAT 1 cut(s) 1330
PagI TCATGA 1 cut(s) 1278
PaqCI CACCTGC 1 cut(s) 676
PasI CCCWGGG 1 cut(s) 206
PciSI GCTCTTC 1 cut(s) 100
PctI GAATGC 3 cut(s) 233, 933, 1199
PdmI GAANNNNTTC 1 cut(s) 109
PfeI GAWTC 4 cut(s) 270, 560, 791, 887
PkrI GCNGC 1 cut(s) 232
PpuMI RGGWCCY 2 cut(s) 42, 1231
PshBI ATTAAT 1 cut(s) 644
PsiI TTATAA 1 cut(s) 362
Psp5II RGGWCCY 2 cut(s) 42, 1231
Psp6I CCWGG 3 cut(s) 118, 205, 280
PspFI CCCAGC 2 cut(s) 83, 98
PspGI CCWGG 3 cut(s) 118, 205, 280
PspN4I GGNNCC 3 cut(s) 44, 872, 1233
PspPI GGNCC 3 cut(s) 42, 982, 1231
PspPPI RGGWCCY 2 cut(s) 42, 1231
RsaI GTAC 3 cut(s) 7, 477, 638
RsaNI GTAC 3 cut(s) 6, 476, 637
RseI CAYNNNNRTG 3 cut(s) 541, 759, 1154
SapI GCTCTTC 1 cut(s) 100
SaqAI TTAA 4 cut(s) 239, 549, 644, 1029
SatI GCNGC 1 cut(s) 231
Sau3AI GATC 5 cut(s) 219, 396, 1095, 1107, 1281
Sau96I GGNCC 3 cut(s) 42, 982, 1231
ScrFI CCNGG 3 cut(s) 120, 207, 282
SduI GDGCHC 1 cut(s) 201
SfaNI GCATC 3 cut(s) 257, 792, 1315
SfcI CTRYAG 2 cut(s) 822, 1293
SinI GGWCC 2 cut(s) 42, 1231
SmiMI CAYNNNNRTG 3 cut(s) 541, 759, 1154
SmlI CTYRAG 1 cut(s) 1226
SmoI CTYRAG 1 cut(s) 1226
Sse9I AATT 7 cut(s) 26, 133, 162, 252, 528, 588, 641
SsiI CCGC 1 cut(s) 980
SspI AATATT 2 cut(s) 373, 1137
SspMI CTAG 2 cut(s) 681, 1302
StyD4I CCNGG 3 cut(s) 118, 205, 280
StyI CCWWGG 1 cut(s) 928
TaaI ACNGT 8 cut(s) 148, 388, 520, 634, 826, 1065, 1183, 1322
TaiI ACGT 2 cut(s) 496, 1083
TaqI TCGA 1 cut(s) 796
TasI AATT 7 cut(s) 26, 133, 162, 252, 528, 588, 641
TatI WGTACW 2 cut(s) 5, 636
TfiI GAWTC 4 cut(s) 270, 560, 791, 887
Tru1I TTAA 4 cut(s) 239, 549, 644, 1029
Tru9I TTAA 4 cut(s) 239, 549, 644, 1029
TscAI CASTG 5 cut(s) 570, 639, 724, 1177, 1327
TseI GCWGC 1 cut(s) 230
TspDTI ATGAA 6 cut(s) 84, 755, 1129, 1192, 1267, 1323
TspRI CASTG 5 cut(s) 570, 639, 724, 1177, 1327
VpaK11BI GGWCC 2 cut(s) 42, 1231
VspI ATTAAT 1 cut(s) 644
XmnI GAANNNNTTC 1 cut(s) 109
XspI CTAG 2 cut(s) 681, 1302
Zsp2I ATGCAT 1 cut(s) 1330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.