Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006868

Physical Location & Seq

Genomic Coordinates Reverse (-)

26054275 .. 26058383

Gene Structure 4109 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G69310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 864 bp

ATGAACGATCCTGATAATCCCGATCTGAGCAACGACGACTCTGCTTGGAGAGAACTCACACTCACAGCTCAAGATTCTGACTTCTTCGACCGAGACACTTCCAATATCCTCTCTGACTTCGGTTGGAACCTCCACCACTCCTCCGATCATCCTCACAGTCTCAGATTCGACTCCGATTTAACACAAACCACCGGAGTCAAACCTACCACCGTCACTTCTTCTTGTTCCTCATCCGCCGCCGTTTCCGTTGCCGTTACCTCTACTAATAATAATCCCTCAGCTACCTCAAGTTCAAGTGAAGATCCGGCCGAGAACTCAACCGCCTCCGCCGAGAAAACACCACCACCGGAGACACCAGTGAAGGAGAAGAAGAAGGCTCAAAAGCGAATTCGGCAACCAAGATTCGCATTCATGACCAAGAGTGATGTGGATAATCTTGAAGATGGATATCGATGGCGTAAATATGGACAAAAAGCCGTCAAGAATAGCCCATTCCCAAGGAGCTACTATAGATGCACAAACAGCAGATGCACGGTGAAGAAGAGAGTAGAACGTTCATCAGATGATCCATCGATAGTGATCACAACATACGAAGGACAACATTGCCATCAAACCATTGGATTCCCTCGTGGTGGAATCCTCACTGCACACGACCCACATAGCTTCACTTCTCATCATCATCTCCCTCCTCCATTACCAAATCCTTATTATTACCAAGAACTCCTTCATCAACTTCACAGAGACAATAATGCTCCTTCACCGCGGTTACCCCGACCTACTACTGAAGATACACCTGCCGTGTCTACTCCATCAGAGGAAGGCTTACTTGGTGATATTGTACCTCAAACTATGCGCAACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0010035 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0043565 GO:0044212 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

287

Amino Acids

32.04

Weight (kDa)

6.22

Isoelectric Point (pI)

51.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	147 - 204	2.7e-27	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69310 AT1G69310 AT1G69310 AT1G69310
fragaria_vesca	FvH4_4g30360 FvH4_4g30360 FvH4_4g30360 FvH4_4g30360 FvH4_4g30360
malus_domestica	MD13G1064700.v1.1 MD16G1063200.v1.1
prunus_persica	Prupe.1G283500_v2.0.a1
pyrus_communis	pycom16g05540
rosa_chinensis	RchiOBHm_Chr4g0438661
rosa_laevigata	RLG00000006343
rosa_multiflora	Rmu_co8519545.1_g000001 Rmu_sc0006646.1_g000001 Rmu_sc0006646.1_g000002
rosa_roxburghii	Rroxscaffold_5G00379660
rosa_rugosa	Rorug04G0312400
rosa_samantha	Rh4AG362800 Rh4BG374100 Rh4CG388100 Rh4DG368800
rosa_wichuraiana	Rw0G007130 Rw0G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	802
Acc16I	TGCGCA	1 cut(s)	854
Acc36I	ACCTGC	1 cut(s)	802
AccI	GTMKAC	1 cut(s)	803
AccII	CGCG	1 cut(s)	763
AciI	CCGC	6 cut(s)	234, 237, 321, 327, 761, 763
AclI	AACGTT	1 cut(s)	553
AclWI	GGATC	3 cut(s)	2, 296, 560
AcoI	YGGCCR	1 cut(s)	306
AcsI	RAATTY	1 cut(s)	387
AcuI	CTGAAG	1 cut(s)	804
AfaI	GTAC	1 cut(s)	840
AfiI	CCNNNNNNNGG	1 cut(s)	632
AgsI	TTSAA	2 cut(s)	294, 440
AjuI	GAANNNNNNNTTGG	4 cut(s)	708, 740, 810, 842
AluBI	AGCT	4 cut(s)	68, 281, 504, 663
AluI	AGCT	4 cut(s)	68, 281, 504, 663
Alw26I	GTCTC	4 cut(s)	87, 164, 344, 735
AlwI	GGATC	3 cut(s)	2, 296, 560
AoxI	GGCC	1 cut(s)	306
ApoI	RAATTY	1 cut(s)	387
Asp700I	GAANNNNTTC	1 cut(s)	723
AspLEI	GCGC	1 cut(s)	855
AsuHPI	GGTGA	3 cut(s)	547, 750, 842
BauI	CACGAG	1 cut(s)	627
BbvCI	CCTCAGC	1 cut(s)	277
BccI	CCATC	5 cut(s)	437, 447, 577, 615, 817
BceAI	ACGGC	4 cut(s)	224, 236, 461, 782
BcgI	CGANNNNNNTGC	2 cut(s)	23, 57
BclI	TGATCA	1 cut(s)	579
BcoDI	GTCTC	4 cut(s)	87, 164, 344, 735
BfmI	CTRYAG	1 cut(s)	508
BfuAI	ACCTGC	1 cut(s)	802
BisI	GCNGC	1 cut(s)	237
BlsI	GCNGC	1 cut(s)	238
BmiI	GGNNCC	1 cut(s)	128
BmsI	GCATC	2 cut(s)	503, 518
Bpu10I	CCTNAGC	1 cut(s)	277
BpuEI	CTTGAG	2 cut(s)	54, 271
Bsa29I	ATCGAT	2 cut(s)	451, 572
BsaBI	GATNNNNATC	2 cut(s)	447, 578
BsaJI	CCNNGG	2 cut(s)	497, 761
BsaWI	WCCGGW	2 cut(s)	191, 346
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	1 cut(s)	632
Bse1I	ACTGG	1 cut(s)	356
Bse3DI	GCAATG	1 cut(s)	601
Bse8I	GATNNNNATC	2 cut(s)	447, 578
BseCI	ATCGAT	2 cut(s)	451, 572
BseDI	CCNNGG	2 cut(s)	497, 761
BseGI	GGATG	2 cut(s)	148, 230
BseJI	GATNNNNATC	2 cut(s)	447, 578
BseLI	CCNNNNNNNGG	1 cut(s)	632
BseMI	GCAATG	1 cut(s)	601
BseMII	CTCAG	3 cut(s)	17, 175, 291
BseNI	ACTGG	1 cut(s)	356
BseRI	GAGGAG	2 cut(s)	130, 678
BseX3I	CGGCCG	1 cut(s)	306
BsgI	GTGCAG	1 cut(s)	630
Bsh1236I	CGCG	1 cut(s)	763
Bsh1285I	CGRYCG	2 cut(s)	91, 309
BshFI	GGCC	1 cut(s)	308
BshVI	ATCGAT	2 cut(s)	451, 572
BsiEI	CGRYCG	2 cut(s)	91, 309
BsiSI	CCGG	3 cut(s)	192, 305, 347
BslI	CCNNNNNNNGG	1 cut(s)	632
BsmAI	GTCTC	4 cut(s)	87, 164, 344, 735
BsmI	GAATGC	1 cut(s)	407
BsnI	GGCC	1 cut(s)	308
Bsp143I	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
BspACI	CCGC	6 cut(s)	234, 237, 321, 327, 761, 763
BspANI	GGCC	1 cut(s)	308
BspCNI	CTCAG	3 cut(s)	18, 174, 290
BspDI	ATCGAT	2 cut(s)	451, 572
BspFNI	CGCG	1 cut(s)	763
BspHI	TCATGA	1 cut(s)	411
BspLI	GGNNCC	1 cut(s)	128
BspMI	ACCTGC	1 cut(s)	802
BspPI	GGATC	3 cut(s)	2, 296, 560
BsrDI	GCAATG	1 cut(s)	601
BsrI	ACTGG	1 cut(s)	356
BssECI	CCNNGG	2 cut(s)	497, 761
BssMI	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
BssSI	CACGAG	1 cut(s)	627
BssT1I	CCWWGG	1 cut(s)	497
Bst2BI	CACGAG	1 cut(s)	627
Bst4CI	ACNGT	3 cut(s)	158, 211, 535
Bst6I	CTCTTC	1 cut(s)	536
BstDEI	CTNAG	3 cut(s)	26, 161, 277
BstDSI	CCRYGG	1 cut(s)	761
BstEII	GGTNACC	1 cut(s)	765
BstF5I	GGATG	2 cut(s)	148, 230
BstFNI	CGCG	1 cut(s)	763
BstHHI	GCGC	1 cut(s)	855
BstKTI	GATC	6 cut(s)	10, 25, 148, 304, 568, 582
BstMAI	GTCTC	4 cut(s)	87, 164, 344, 735
BstMBI	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
BstMCI	CGRYCG	2 cut(s)	91, 309
BstMWI	GCNNNNNNNGC	2 cut(s)	391, 522
BstPI	GGTNACC	1 cut(s)	765
BstSFI	CTRYAG	1 cut(s)	508
BstUI	CGCG	1 cut(s)	763
BstX2I	RGATCY	1 cut(s)	301
BstYI	RGATCY	1 cut(s)	301
BstZI	CGGCCG	1 cut(s)	306
Bsu15I	ATCGAT	2 cut(s)	451, 572
BsuRI	GGCC	1 cut(s)	308
BsuTUI	ATCGAT	2 cut(s)	451, 572
BtgI	CCRYGG	1 cut(s)	761
BtsCI	GGATG	2 cut(s)	148, 230
BtsI	GCAGTG	1 cut(s)	642
BtsIMutI	CAGTG	2 cut(s)	363, 642
BveI	ACCTGC	1 cut(s)	802
CciI	TCATGA	1 cut(s)	411
CfoI	GCGC	1 cut(s)	855
Cfr42I	CCGCGG	1 cut(s)	764
ClaI	ATCGAT	2 cut(s)	451, 572
Csp6I	GTAC	1 cut(s)	839
CviAII	CATG	1 cut(s)	412
CviJI	RGCY	9 cut(s)	68, 281, 308, 377, 476, 489, 504, 663, 822
CviKI_1	RGCY	9 cut(s)	68, 281, 308, 377, 476, 489, 504, 663, 822
CviQI	GTAC	1 cut(s)	839
DdeI	CTNAG	3 cut(s)	26, 161, 277
DpnI	GATC	6 cut(s)	9, 24, 147, 303, 567, 581
DpnII	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
EaeI	YGGCCR	1 cut(s)	306
EagI	CGGCCG	1 cut(s)	306
Eam1104I	CTCTTC	1 cut(s)	536
EarI	CTCTTC	1 cut(s)	536
EciI	GGCGGA	2 cut(s)	223, 316
EclXI	CGGCCG	1 cut(s)	306
Eco130I	CCWWGG	1 cut(s)	497
Eco32I	GATATC	1 cut(s)	449
Eco52I	CGGCCG	1 cut(s)	306
Eco57I	CTGAAG	1 cut(s)	804
Eco91I	GGTNACC	1 cut(s)	765
EcoO65I	GGTNACC	1 cut(s)	765
EcoRI	GAATTC	1 cut(s)	387
EcoRV	GATATC	1 cut(s)	449
EcoT14I	CCWWGG	1 cut(s)	497
ErhI	CCWWGG	1 cut(s)	497
FaeI	CATG	1 cut(s)	415
FaiI	YATR	6 cut(s)	413, 465, 510, 589, 660, 851
FalI	AAGNNNNNCTT	4 cut(s)	708, 740, 810, 842
FatI	CATG	1 cut(s)	411
FbaI	TGATCA	1 cut(s)	579
FblI	GTMKAC	1 cut(s)	803
Fnu4HI	GCNGC	1 cut(s)	237
FokI	GGATG	2 cut(s)	135, 217
Fsp4HI	GCNGC	1 cut(s)	237
FspI	TGCGCA	1 cut(s)	854
GlaI	GCGC	1 cut(s)	854
GluI	GCNGC	1 cut(s)	237
HaeIII	GGCC	1 cut(s)	308
HapII	CCGG	3 cut(s)	192, 305, 347
HhaI	GCGC	1 cut(s)	855
Hin1II	CATG	1 cut(s)	415
Hin6I	GCGC	1 cut(s)	853
HinP1I	GCGC	1 cut(s)	853
HinfI	GANTC	8 cut(s)	38, 74, 165, 170, 195, 402, 621, 636
HpaII	CCGG	3 cut(s)	192, 305, 347
HphI	GGTGA	3 cut(s)	547, 750, 842
Hpy166II	GTNNAC	1 cut(s)	804
Hpy188I	TCNGA	8 cut(s)	27, 79, 115, 145, 164, 175, 562, 814
Hpy188III	TCNNGA	6 cut(s)	11, 20, 71, 412, 437, 481
Hpy8I	GTNNAC	1 cut(s)	804
Hpy99I	CGWCG	1 cut(s)	38
HpyAV	CCTTC	6 cut(s)	355, 367, 587, 734, 765, 812
HpyCH4III	ACNGT	3 cut(s)	158, 211, 535
HpyCH4IV	ACGT	1 cut(s)	553
HpyCH4V	TGCA	3 cut(s)	516, 531, 647
HpyF10VI	GCNNNNNNNGC	2 cut(s)	391, 522
HpyF3I	CTNAG	3 cut(s)	26, 161, 277
HpySE526I	ACGT	1 cut(s)	553
Hsp92II	CATG	1 cut(s)	415
HspAI	GCGC	1 cut(s)	853
Ksp22I	TGATCA	1 cut(s)	579
KspI	CCGCGG	1 cut(s)	764
Kzo9I	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
LmnI	GCTCC	2 cut(s)	501, 757
LpnPI	CCDG	6 cut(s)	24, 205, 318, 360, 369, 807
LweI	GCATC	2 cut(s)	503, 518
MaeII	ACGT	1 cut(s)	553
MaeIII	GTNAC	3 cut(s)	211, 253, 765
MalI	GATC	6 cut(s)	9, 24, 147, 303, 567, 581
MboI	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
MboII	GAAGA	9 cut(s)	76, 210, 311, 379, 382, 452, 550, 553, 797
MflI	RGATCY	1 cut(s)	301
MluCI	AATT	1 cut(s)	387
MlyI	GAGTC	3 cut(s)	32, 164, 204
MmeI	TCCRAC	1 cut(s)	104
MroXI	GAANNNNTTC	1 cut(s)	723
MseI	TTAA	1 cut(s)	179
MspA1I	CMGCKG	1 cut(s)	763
MspI	CCGG	3 cut(s)	192, 305, 347
Mva1269I	GAATGC	1 cut(s)	407
MvnI	CGCG	1 cut(s)	763
MwoI	GCNNNNNNNGC	2 cut(s)	391, 522
NdeII	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
NlaIII	CATG	1 cut(s)	415
NlaIV	GGNNCC	1 cut(s)	128
NmeAIII	GCCGAG	2 cut(s)	334, 355
NmuCI	GTSAC	1 cut(s)	211
NsbI	TGCGCA	1 cut(s)	854
PagI	TCATGA	1 cut(s)	411
PaqCI	CACCTGC	1 cut(s)	802
PctI	GAATGC	1 cut(s)	407
PdmI	GAANNNNTTC	1 cut(s)	723
PfeI	GAWTC	5 cut(s)	74, 165, 402, 621, 636
PkrI	GCNGC	1 cut(s)	238
PleI	GAGTC	3 cut(s)	32, 164, 203
PpsI	GAGTC	3 cut(s)	32, 164, 203
Psp1406I	AACGTT	1 cut(s)	553
PspEI	GGTNACC	1 cut(s)	765
PspN4I	GGNNCC	1 cut(s)	128
PsuI	RGATCY	1 cut(s)	301
RsaI	GTAC	1 cut(s)	840
RsaNI	GTAC	1 cut(s)	839
SacII	CCGCGG	1 cut(s)	764
SaqAI	TTAA	1 cut(s)	179
SatI	GCNGC	1 cut(s)	237
Sau3AI	GATC	6 cut(s)	7, 22, 145, 301, 565, 579
SchI	GAGTC	3 cut(s)	32, 164, 204
SfaNI	GCATC	2 cut(s)	503, 518
SfcI	CTRYAG	1 cut(s)	508
Sfr303I	CCGCGG	1 cut(s)	764
SgrBI	CCGCGG	1 cut(s)	764
SmlI	CTYRAG	2 cut(s)	69, 286
SmoI	CTYRAG	2 cut(s)	69, 286
Sse9I	AATT	1 cut(s)	387
SsiI	CCGC	6 cut(s)	234, 237, 321, 327, 761, 763
StyI	CCWWGG	1 cut(s)	497
TaaI	ACNGT	3 cut(s)	158, 211, 535
TaiI	ACGT	1 cut(s)	556
TaqI	TCGA	4 cut(s)	87, 168, 451, 572
TaqII	GACCGA	1 cut(s)	105
TasI	AATT	1 cut(s)	387
TauI	GCSGC	1 cut(s)	239
TfiI	GAWTC	5 cut(s)	74, 165, 402, 621, 636
Tru1I	TTAA	1 cut(s)	179
Tru9I	TTAA	1 cut(s)	179
TscAI	CASTG	2 cut(s)	363, 649
TseFI	GTSAC	1 cut(s)	211
Tsp45I	GTSAC	1 cut(s)	211
TspDTI	ATGAA	4 cut(s)	17, 400, 546, 716
TspGWI	ACGGA	1 cut(s)	235
TspRI	CASTG	2 cut(s)	363, 649
XapI	RAATTY	1 cut(s)	387
XcmI	CCANNNNNNNNNTGG	2 cut(s)	424, 614
XmiI	GTMKAC	1 cut(s)	803
XmnI	GAANNNNTTC	1 cut(s)	723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.