Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0006868

Physical Location & Seq

Genomic Coordinates Reverse (-)

48784980 .. 48788450

Gene Structure 3471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0312400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGAGACTGATTCAGAGTAAATTGAAAGCCCTGATGAAGAAGAACTTTGAACCTAGTCACTTTGATGAACAAAAGGCTCTTCAATTCGGATTGAATGAATTGCTTACTGCGAATGAAACCTATTGGAGGCAACTATCCAAAATTCAATGGCTAAAGGAAGGGGACCTTAACACTGCATTCTTTCATCGAAGGGCTTCGAATTGCAGATGCAGAAATCGAAATAAAGGTCTCACAAATGCAGCAGGGCAGTGGACGACTTCTACACCGGAAGAAGTCTCTGCAATCTTACTTCAGTACTATGACTCGATCTTTCGAGCTGATAATTCTGATCCTGTAGCACTTGATGTGGTGTTGGATTGCTTACAACCCAAGGTATCAGAGGAGATGAACTGTGAGCTTACAGCTCCGTACTCTGATGCTGAAATCAAAAAGGCTTTATTTCAAATGCATCCCTCAAAGTCGCTGGGTCTTGATGGGATGTCCCCTTGCTTCTTCCAGAAATTTTGGAATGTGGTGGAACATGATATCAAAGAACCGAAGCTTCCCTCTGACTTGAGACCAATTGCTTTATGCAATGTTGTGTACAAGATTTCTTCCAAGGTCCTTGCTAATAGACTCAAGACAATTCTGCCTCACATTATTTTCCCATTACAAAGTGCTTTTGTTCCGGGAAGAATAATTTCGGATAACACTTTGGTAGCTACGGAGATTGCTCATTTTATGGAAAAGCTTCGTAGGCAGGCTGAGGGATTTTTTTCACTTAAACTTGACATCTCTAAAGCTTATGACCGGTTGGAATGGGCGAATGGCAATATCTGGAAGCTGTTCTTCTCAGGCTGGGTTTTTGTCGAAGCTGGGCCTCTATTAGCAACAATTAAATCTGTCAATTATTCTATTTTGATAAATGGCGCTCCTACAGGTTTTATATTGCCTACCAGGGGTATACGACAAGGAGGCCCCTTATCTCCCTATTTGTTCATATTGCGTGCAGAAGGTCTTTCAGCCTTGATTTCCTCCTCTATCCATAATAGAACTATTAGAGGCTTAACCATGGCCCCTACTGCTCCCACTATCCACCATCTACTTTTGCAGATGATAGCTTTCTCTTTGGGGAAGCCTCAGTTCAAGTCTAGTGTGGTGTTTAGCGGTAATGTCAGTTTGCAGAACAGGAACAACCTAGCAGCTATTCTTGGGGTGCAGTGTGTTAAAGAACATGATTTATATCTCAGTTTGCCTATTCATGTAGGGCACAACAAGAAAGCCATCTTTGCTTATCTGAAAGAGAAATTGTCAAAGAAGCTTATTAGTTGGCGTTCCAAGATTCTGAGTTATGGAGCAGATATGGGTGAGCGGCCTTCCTATTCTTGGAGAAGTTTAATGGAGGCTCGACCGGTTCTACAAGCAGGGTTGTTATGGAGGATTGGTGACTGTCAGCTAGTTAACATTTGGGATGATGAGTGGATTCCAAATGTCTCCCATCATTCATTGTCTCGACCTGATGACTCTGTTTTTGAGCATGTTTCAAACTTGATTAATGGTGACTCCTTGACTTGGGACCATGCAGCTGTTCATGCTTGTTTTGAGCCTCATGTGGCAGACCAAGTGCTTTCTATTCCATTAAGTCATCATTTTGGCACTGATAGGTTGTCGTGGAAGCTTGAGAAAAGGGGTCACTTTTCTGTCAAAACGGCGTATAGGGTGGCATGTGATTTCTCTGTTGGTAACCTATTTGCTTCTACCTCTACTGGAGATCCATATGGACTTATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0010035 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0043565 GO:0044212 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

589

Amino Acids

66.39

Weight (kDa)

9.03

Isoelectric Point (pI)

37.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	179 - 340	2.5e-15	Reverse transcriptase (RNA-dependent DNA polymerase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006868)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69310 AT1G69310 AT1G69310 AT1G69310
fragaria_vesca	FvH4_4g30360 FvH4_4g30360 FvH4_4g30360 FvH4_4g30360 FvH4_4g30360
malus_domestica	MD13G1064700.v1.1 MD16G1063200.v1.1
prunus_persica	Prupe.1G283500_v2.0.a1
pyrus_communis	pycom16g05540
rosa_chinensis	RchiOBHm_Chr4g0438661
rosa_laevigata	RLG00000006343
rosa_multiflora	Rmu_co8519545.1_g000001 Rmu_sc0006646.1_g000001 Rmu_sc0006646.1_g000002
rosa_roxburghii	Rroxscaffold_5G00379660
rosa_rugosa	Rorug04G0312400
rosa_samantha	Rh4AG362800 Rh4BG374100 Rh4CG388100 Rh4DG368800
rosa_wichuraiana	Rw0G007130 Rw0G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1351
AccI	GTMKAC	1 cut(s)	943
AciI	CCGC	2 cut(s)	1146, 1351
AclWI	GGATC	2 cut(s)	323, 1745
AcsI	RAATTY	2 cut(s)	141, 500
AcuI	CTGAAG	1 cut(s)	275
AfaI	GTAC	3 cut(s)	296, 410, 584
AfiI	CCNNNNNNNGG	4 cut(s)	126, 938, 1365, 1551
AgeI	ACCGGT	2 cut(s)	789, 1390
AgsI	TTSAA	8 cut(s)	25, 50, 83, 94, 146, 443, 1126, 1524
AjnI	CCWGG	1 cut(s)	935
Alw26I	GTCTC	5 cut(s)	233, 280, 550, 1477, 1494
AlwI	GGATC	2 cut(s)	323, 1745
AoxI	GGCC	4 cut(s)	857, 955, 1053, 1352
ApeKI	GCWGC	3 cut(s)	239, 1181, 1562
ApoI	RAATTY	2 cut(s)	141, 500
ArsI	GACNNNNNNTTYG	4 cut(s)	211, 243, 1493, 1525
AseI	ATTAAT	1 cut(s)	1533
AsiGI	ACCGGT	2 cut(s)	789, 1390
Asp700I	GAANNNNTTC	4 cut(s)	193, 679, 729, 824
AspLEI	GCGC	1 cut(s)	911
AspS9I	GGNCC	6 cut(s)	163, 601, 857, 956, 1054, 1555
AsuC2I	CCSGG	1 cut(s)	669
AsuHPI	GGTGA	3 cut(s)	1358, 1436, 1550
AsuII	TTCGAA	1 cut(s)	197
AvaII	GGWCC	3 cut(s)	163, 601, 1555
BaeGI	GKGCMC	1 cut(s)	1251
BbvCI	CCTCAGC	1 cut(s)	744
BbvI	GCAGC	3 cut(s)	251, 1193, 1574
BccI	CCATC	4 cut(s)	467, 1086, 1271, 1485
BceAI	ACGGC	1 cut(s)	1704
BciT130I	CCWGG	1 cut(s)	937
BcnI	CCSGG	1 cut(s)	669
BcoDI	GTCTC	5 cut(s)	233, 280, 550, 1477, 1494
BfaI	CTAG	5 cut(s)	54, 1131, 1178, 1436, 1768
BfmI	CTRYAG	2 cut(s)	333, 915
BfoI	RGCGCY	1 cut(s)	912
BisI	GCNGC	4 cut(s)	240, 1182, 1352, 1563
BlsI	GCNGC	4 cut(s)	241, 1183, 1353, 1564
BmcAI	AGTACT	1 cut(s)	296
Bme1390I	CCNGG	2 cut(s)	669, 937
Bme18I	GGWCC	3 cut(s)	163, 601, 1555
BmgT120I	GGNCC	6 cut(s)	163, 601, 857, 956, 1054, 1555
BmiI	GGNNCC	4 cut(s)	164, 958, 1056, 1556
BmrFI	CCNGG	2 cut(s)	669, 937
BmsI	GCATC	3 cut(s)	197, 406, 457
BpmI	CTGGAG	1 cut(s)	1767
Bpu10I	CCTNAGC	1 cut(s)	744
Bpu14I	TTCGAA	1 cut(s)	197
BpuEI	CTTGAG	3 cut(s)	574, 602, 1679
BpuMI	CCSGG	1 cut(s)	669
BsaBI	GATNNNNATC	1 cut(s)	1221
BsaI	GGTCTC	2 cut(s)	233, 550
BsaJI	CCNNGG	4 cut(s)	369, 597, 936, 1050
BsaWI	WCCGGW	3 cut(s)	265, 789, 1390
BsaXI	ACNNNNNCTCC	2 cut(s)	1408, 1438
Bsc4I	CCNNNNNNNGG	4 cut(s)	126, 938, 1365, 1551
Bse118I	RCCGGY	2 cut(s)	789, 1390
Bse1I	ACTGG	1 cut(s)	1750
Bse3DI	GCAATG	1 cut(s)	580
Bse8I	GATNNNNATC	1 cut(s)	1221
BseBI	CCWGG	1 cut(s)	937
BseDI	CCNNGG	4 cut(s)	369, 597, 936, 1050
BseGI	GGATG	3 cut(s)	448, 483, 1456
BseJI	GATNNNNATC	1 cut(s)	1221
BseLI	CCNNNNNNNGG	4 cut(s)	126, 938, 1365, 1551
BseMI	GCAATG	1 cut(s)	580
BseMII	CTCAG	5 cut(s)	735, 846, 1133, 1240, 1316
BseNI	ACTGG	1 cut(s)	1750
BseRI	GAGGAG	2 cut(s)	395, 1006
BseSI	GKGCMC	1 cut(s)	1251
BseXI	GCAGC	3 cut(s)	251, 1193, 1574
BseYI	CCCAGC	3 cut(s)	463, 837, 854
BsgI	GTGCAG	2 cut(s)	1008, 1217
Bsh1285I	CGRYCG	1 cut(s)	1391
BshFI	GGCC	4 cut(s)	859, 957, 1055, 1354
BshTI	ACCGGT	2 cut(s)	789, 1390
BsiEI	CGRYCG	1 cut(s)	1391
BsiSI	CCGG	4 cut(s)	266, 668, 790, 1391
BslFI	GGGAC	3 cut(s)	176, 466, 1568
BslI	CCNNNNNNNGG	4 cut(s)	126, 938, 1365, 1551
BsmAI	GTCTC	5 cut(s)	233, 280, 550, 1477, 1494
BsmFI	GGGAC	3 cut(s)	176, 466, 1568
BsmI	GAATGC	1 cut(s)	176
BsnI	GGCC	4 cut(s)	859, 957, 1055, 1354
Bso31I	GGTCTC	2 cut(s)	233, 550
Bsp119I	TTCGAA	1 cut(s)	197
Bsp1286I	GDGCHC	1 cut(s)	1251
Bsp1407I	TGTACA	1 cut(s)	582
Bsp143I	GATC	3 cut(s)	306, 328, 1750
Bsp19I	CCATGG	1 cut(s)	1050
BspACI	CCGC	2 cut(s)	1146, 1351
BspANI	GGCC	4 cut(s)	859, 957, 1055, 1354
BspCNI	CTCAG	5 cut(s)	736, 845, 1132, 1239, 1317
BspLI	GGNNCC	4 cut(s)	164, 958, 1056, 1556
BspPI	GGATC	2 cut(s)	323, 1745
BspQI	GCTCTTC	1 cut(s)	84
BspT104I	TTCGAA	1 cut(s)	197
BspTNI	GGTCTC	2 cut(s)	233, 550
BsrBI	CCGCTC	1 cut(s)	1351
BsrDI	GCAATG	1 cut(s)	580
BsrFI	RCCGGY	2 cut(s)	789, 1390
BsrGI	TGTACA	1 cut(s)	582
BsrI	ACTGG	1 cut(s)	1750
BssAI	RCCGGY	2 cut(s)	789, 1390
BssECI	CCNNGG	4 cut(s)	369, 597, 936, 1050
BssMI	GATC	3 cut(s)	306, 328, 1750
BssNAI	GTATAC	1 cut(s)	944
BssT1I	CCWWGG	3 cut(s)	369, 597, 1050
Bst1107I	GTATAC	1 cut(s)	944
Bst2UI	CCWGG	1 cut(s)	937
Bst4CI	ACNGT	2 cut(s)	392, 1430
Bst6I	CTCTTC	1 cut(s)	84
BstAUI	TGTACA	1 cut(s)	582
BstBI	TTCGAA	1 cut(s)	197
BstC8I	GCNNGC	2 cut(s)	741, 987
BstDEI	CTNAG	5 cut(s)	744, 832, 1119, 1226, 1325
BstDSI	CCRYGG	1 cut(s)	1050
BstEII	GGTNACC	1 cut(s)	1721
BstENI	CCTNNNNNAGG	1 cut(s)	124
BstF5I	GGATG	3 cut(s)	448, 483, 1456
BstH2I	RGCGCY	1 cut(s)	912
BstHHI	GCGC	1 cut(s)	911
BstKTI	GATC	3 cut(s)	309, 331, 1753
BstMAI	GTCTC	5 cut(s)	233, 280, 550, 1477, 1494
BstMBI	GATC	3 cut(s)	306, 328, 1750
BstMCI	CGRYCG	1 cut(s)	1391
BstMWI	GCNNNNNNNGC	4 cut(s)	736, 1061, 1268, 1571
BstNI	CCWGG	1 cut(s)	937
BstNSI	RCATGY	2 cut(s)	1520, 1707
BstPI	GGTNACC	1 cut(s)	1721
BstSCI	CCNGG	2 cut(s)	667, 935
BstSFI	CTRYAG	2 cut(s)	333, 915
BstSLI	GKGCMC	1 cut(s)	1251
BstV1I	GCAGC	3 cut(s)	251, 1193, 1574
BstX2I	RGATCY	1 cut(s)	1750
BstYI	RGATCY	1 cut(s)	1750
BstZ17I	GTATAC	1 cut(s)	944
BsuRI	GGCC	4 cut(s)	859, 957, 1055, 1354
BtgI	CCRYGG	1 cut(s)	1050
BtsCI	GGATG	3 cut(s)	448, 483, 1456
BtsI	GCAGTG	3 cut(s)	171, 254, 1205
BtsIMutI	CAGTG	4 cut(s)	171, 254, 1205, 1635
Cac8I	GCNNGC	2 cut(s)	741, 987
CfoI	GCGC	1 cut(s)	911
Cfr10I	RCCGGY	2 cut(s)	789, 1390
Cfr13I	GGNCC	6 cut(s)	163, 601, 857, 956, 1054, 1555
Csp6I	GTAC	3 cut(s)	295, 409, 583
CspAI	ACCGGT	2 cut(s)	789, 1390
CviAII	CATG	9 cut(s)	521, 1051, 1214, 1241, 1517, 1559, 1571, 1589, 1704
CviQI	GTAC	3 cut(s)	295, 409, 583
DdeI	CTNAG	5 cut(s)	744, 832, 1119, 1226, 1325
DpnI	GATC	3 cut(s)	308, 330, 1752
DpnII	GATC	3 cut(s)	306, 328, 1750
Eam1104I	CTCTTC	1 cut(s)	84
EarI	CTCTTC	1 cut(s)	84
Eco130I	CCWWGG	3 cut(s)	369, 597, 1050
Eco31I	GGTCTC	2 cut(s)	233, 550
Eco32I	GATATC	1 cut(s)	526
Eco47I	GGWCC	3 cut(s)	163, 601, 1555
Eco57I	CTGAAG	1 cut(s)	275
Eco91I	GGTNACC	1 cut(s)	1721
EcoNI	CCTNNNNNAGG	1 cut(s)	124
EcoO109I	RGGNCCY	3 cut(s)	163, 601, 956
EcoO65I	GGTNACC	1 cut(s)	1721
EcoRII	CCWGG	1 cut(s)	935
EcoRV	GATATC	1 cut(s)	526
EcoT14I	CCWWGG	3 cut(s)	369, 597, 1050
EcoT22I	ATGCAT	1 cut(s)	450
ErhI	CCWWGG	3 cut(s)	369, 597, 1050
FaeI	CATG	9 cut(s)	524, 1054, 1217, 1244, 1520, 1562, 1574, 1592, 1707
FalI	AAGNNNNNCTT	6 cut(s)	29, 61, 150, 182, 812, 844
FaqI	GGGAC	3 cut(s)	176, 466, 1568
FatI	CATG	9 cut(s)	520, 1050, 1213, 1240, 1516, 1558, 1570, 1588, 1703
FauNDI	CATATG	1 cut(s)	1756
FblI	GTMKAC	1 cut(s)	943
Fnu4HI	GCNGC	4 cut(s)	240, 1182, 1352, 1563
FokI	GGATG	3 cut(s)	435, 490, 1463
Fsp4HI	GCNGC	4 cut(s)	240, 1182, 1352, 1563
FspBI	CTAG	5 cut(s)	54, 1131, 1178, 1436, 1768
GlaI	GCGC	1 cut(s)	910
GluI	GCNGC	4 cut(s)	240, 1182, 1352, 1563
GsaI	CCCAGC	3 cut(s)	467, 841, 858
GsuI	CTGGAG	1 cut(s)	1767
HaeII	RGCGCY	1 cut(s)	912
HaeIII	GGCC	4 cut(s)	859, 957, 1055, 1354
HapII	CCGG	4 cut(s)	266, 668, 790, 1391
HhaI	GCGC	1 cut(s)	911
Hin1II	CATG	9 cut(s)	524, 1054, 1217, 1244, 1520, 1562, 1574, 1592, 1707
Hin6I	GCGC	1 cut(s)	909
HinP1I	GCGC	1 cut(s)	909
HincII	GTYRAC	1 cut(s)	1441
HindII	GTYRAC	1 cut(s)	1441
HindIII	AAGCTT	5 cut(s)	539, 728, 780, 1298, 1655
HinfI	GANTC	7 cut(s)	10, 302, 615, 1321, 1462, 1502, 1541
HpaI	GTTAAC	1 cut(s)	1441
HpaII	CCGG	4 cut(s)	266, 668, 790, 1391
HphI	GGTGA	3 cut(s)	1358, 1436, 1550
Hpy166II	GTNNAC	4 cut(s)	252, 583, 944, 1441
Hpy188I	TCNGA	9 cut(s)	15, 89, 328, 379, 415, 550, 685, 1278, 1326
Hpy188III	TCNNGA	5 cut(s)	470, 496, 619, 817, 1491
Hpy8I	GTNNAC	4 cut(s)	252, 583, 944, 1441
HpyAV	CCTTC	4 cut(s)	152, 183, 986, 1365
HpyCH4III	ACNGT	2 cut(s)	392, 1430
HpyF10VI	GCNNNNNNNGC	4 cut(s)	736, 1061, 1268, 1571
HpyF3I	CTNAG	5 cut(s)	744, 832, 1119, 1226, 1325
Hsp92II	CATG	9 cut(s)	524, 1054, 1217, 1244, 1520, 1562, 1574, 1592, 1707
HspAI	GCGC	1 cut(s)	909
KspAI	GTTAAC	1 cut(s)	1441
Kzo9I	GATC	3 cut(s)	306, 328, 1750
LguI	GCTCTTC	1 cut(s)	84
LmnI	GCTCC	4 cut(s)	409, 916, 1069, 1334
Lsp1109I	GCAGC	3 cut(s)	251, 1193, 1574
LweI	GCATC	3 cut(s)	197, 406, 457
MaeI	CTAG	5 cut(s)	54, 1131, 1178, 1436, 1768
MaeIII	GTNAC	5 cut(s)	56, 1424, 1538, 1670, 1721
MalI	GATC	3 cut(s)	308, 330, 1752
MbiI	CCGCTC	1 cut(s)	1351
MboI	GATC	3 cut(s)	306, 328, 1750
MboII	GAAGA	8 cut(s)	49, 52, 71, 281, 484, 585, 684, 820
MfeI	CAATTG	1 cut(s)	561
MflI	RGATCY	1 cut(s)	1750
MhlI	GDGCHC	1 cut(s)	1251
MlyI	GAGTC	4 cut(s)	296, 609, 1496, 1535
MmeI	TCCRAC	2 cut(s)	333, 774
Mph1103I	ATGCAT	1 cut(s)	450
MroXI	GAANNNNTTC	4 cut(s)	193, 679, 729, 824
MseI	TTAA	9 cut(s)	168, 762, 876, 1046, 1206, 1376, 1440, 1533, 1619
MslI	CAYNNNNRTG	1 cut(s)	63
MspA1I	CMGCKG	1 cut(s)	1565
MspI	CCGG	4 cut(s)	266, 668, 790, 1391
MspR9I	CCNGG	2 cut(s)	669, 937
MunI	CAATTG	1 cut(s)	561
Mva1269I	GAATGC	1 cut(s)	176
MvaI	CCWGG	1 cut(s)	937
MwoI	GCNNNNNNNGC	4 cut(s)	736, 1061, 1268, 1571
NciI	CCSGG	1 cut(s)	669
NcoI	CCATGG	1 cut(s)	1050
NdeI	CATATG	1 cut(s)	1756
NdeII	GATC	3 cut(s)	306, 328, 1750
NlaIII	CATG	9 cut(s)	524, 1054, 1217, 1244, 1520, 1562, 1574, 1592, 1707
NlaIV	GGNNCC	4 cut(s)	164, 958, 1056, 1556
NmuCI	GTSAC	4 cut(s)	56, 1424, 1538, 1670
NsiI	ATGCAT	1 cut(s)	450
NspI	RCATGY	2 cut(s)	1520, 1707
NspV	TTCGAA	1 cut(s)	197
PciSI	GCTCTTC	1 cut(s)	84
PctI	GAATGC	1 cut(s)	176
PdmI	GAANNNNTTC	4 cut(s)	193, 679, 729, 824
PfeI	GAWTC	3 cut(s)	10, 1321, 1462
PfoI	TCCNGGA	1 cut(s)	667
PinAI	ACCGGT	2 cut(s)	789, 1390
PkrI	GCNGC	4 cut(s)	241, 1183, 1353, 1564
PleI	GAGTC	4 cut(s)	296, 609, 1496, 1535
PpsI	GAGTC	4 cut(s)	296, 609, 1496, 1535
PpuMI	RGGWCCY	2 cut(s)	163, 601
PshBI	ATTAAT	1 cut(s)	1533
Psp5II	RGGWCCY	2 cut(s)	163, 601
Psp6I	CCWGG	1 cut(s)	935
PspEI	GGTNACC	1 cut(s)	1721
PspFI	CCCAGC	3 cut(s)	463, 837, 854
PspGI	CCWGG	1 cut(s)	935
PspN4I	GGNNCC	4 cut(s)	164, 958, 1056, 1556
PspPI	GGNCC	6 cut(s)	163, 601, 857, 956, 1054, 1555
PspPPI	RGGWCCY	2 cut(s)	163, 601
PsuI	RGATCY	1 cut(s)	1750
PvuII	CAGCTG	1 cut(s)	1565
RsaI	GTAC	3 cut(s)	296, 410, 584
RsaNI	GTAC	3 cut(s)	295, 409, 583
RseI	CAYNNNNRTG	1 cut(s)	63
SapI	GCTCTTC	1 cut(s)	84
SaqAI	TTAA	9 cut(s)	168, 762, 876, 1046, 1206, 1376, 1440, 1533, 1619
SatI	GCNGC	4 cut(s)	240, 1182, 1352, 1563
Sau3AI	GATC	3 cut(s)	306, 328, 1750
Sau96I	GGNCC	6 cut(s)	163, 601, 857, 956, 1054, 1555
ScaI	AGTACT	1 cut(s)	296
SchI	GAGTC	4 cut(s)	296, 609, 1496, 1535
ScrFI	CCNGG	2 cut(s)	669, 937
SduI	GDGCHC	1 cut(s)	1251
SfaNI	GCATC	3 cut(s)	197, 406, 457
SfcI	CTRYAG	2 cut(s)	333, 915
SfuI	TTCGAA	1 cut(s)	197
SinI	GGWCC	3 cut(s)	163, 601, 1555
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	3 cut(s)	553, 617, 1658
SmoI	CTYRAG	3 cut(s)	553, 617, 1658
SsiI	CCGC	2 cut(s)	1146, 1351
SspMI	CTAG	5 cut(s)	54, 1131, 1178, 1436, 1768
StyD4I	CCNGG	2 cut(s)	667, 935
StyI	CCWWGG	3 cut(s)	369, 597, 1050
TaaI	ACNGT	2 cut(s)	392, 1430
TaqI	TCGA	8 cut(s)	187, 197, 217, 305, 313, 849, 1387, 1492
TatI	WGTACW	2 cut(s)	294, 582
TauI	GCSGC	1 cut(s)	1354
TfiI	GAWTC	3 cut(s)	10, 1321, 1462
Tru1I	TTAA	9 cut(s)	168, 762, 876, 1046, 1206, 1376, 1440, 1533, 1619
Tru9I	TTAA	9 cut(s)	168, 762, 876, 1046, 1206, 1376, 1440, 1533, 1619
TscAI	CASTG	4 cut(s)	178, 254, 1205, 1642
TseFI	GTSAC	4 cut(s)	56, 1424, 1538, 1670
TseI	GCWGC	3 cut(s)	239, 1181, 1562
Tsp45I	GTSAC	4 cut(s)	56, 1424, 1538, 1670
TspGWI	ACGGA	2 cut(s)	396, 719
TspRI	CASTG	4 cut(s)	178, 254, 1205, 1642
VpaK11BI	GGWCC	3 cut(s)	163, 601, 1555
VspI	ATTAAT	1 cut(s)	1533
XagI	CCTNNNNNAGG	1 cut(s)	124
XapI	RAATTY	2 cut(s)	141, 500
XceI	RCATGY	2 cut(s)	1520, 1707
XmiI	GTMKAC	1 cut(s)	943
XmnI	GAANNNNTTC	4 cut(s)	193, 679, 729, 824
XspI	CTAG	5 cut(s)	54, 1131, 1178, 1436, 1768
ZrmI	AGTACT	1 cut(s)	296
Zsp2I	ATGCAT	1 cut(s)	450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.