Prupe.1G283500_v2.0.a1
WRKY Family

WRKY transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
28556367 .. 28560635
4269 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G283500.1

Sequence Viewer

Length: 993 bp
ATGGACGACGACAAAGACAACCGCGATCCAGCTAGAACGACCGAGTTCACGACTCAGTCCACCTGGCCACTCGACCCGGACAGCGCCTACTTCTTCACCAGCCACGACGTCAGAGACAACACACTCCTCACCGAATTCGGCTGGAACTTCCACCCGGACGGCTCCAGACCCGACGGCTTTTCGGAACTTGACCCGATCGGAACCCGCGACATGTCCGATTTGGCGGCAACTAGTAGCCAGCTTGTTGCGGACTGCTTACGACCCGCCGACAGCAGCAGCAGCAGCACCGCGGCGTTTCGGAGCTCCGACCCGGCCCCCGTCGTCGGATCCGCTTCGATGAACCCGTCTGTTTCGTCGACCTCCAGCGAGGATCCGCCAGAAAAATCAACGGGGTCCGTCGGCAAACCACCGCCCGAGATACCGAGTAAGGTTAAAAAGAAGGGGCAGAAGAGAATCCGGCAGCCACGATTTGCATTTATGACTAAAAGTGAAGTTGATCATCTTGAGGATGGCTACCGCTGGCGGAAATATGGACAGAAAGCTGTCAAAAACAGTCCCTTTCCAAGGAGCTACTATCGCTGCACAAATAGCAAATGCACAGTGAAGAAAAGGGTTGAACGTTCCTCTGAAGATCCCACAATTGTAATTACGACGTACGAAGGCCAACACTGTCATCATACTGTTGCATTCCCCCGGGGCGGAGTGATTGCTCAAGAATCTGGGTTTGCAGGCCACCATTTGGCGCAGCTGCCTCCAGTCAGCTCACACTTCATGTATTATCCTGCAATTCAACCCAGAGAAGGAGTTAGTCCTGTTAACTTGACAAGAACGACTTCGCACCAATTAGCATCCCCACGTGGTGATGATGAGGATGATGATGATCAAGCTGCAGGAGGAGGATCATCACACTGCCTTGATCCACAGACAACTGCAGTTCCTACAGATGAAGGGCTTCTTGGGGACATTGTACCTCCTGGGATGCGTAATCGATGA

Protein Analysis

331

Amino Acids

36.13

Weight (kDa)

5.77

Isoelectric Point (pI)

55.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 111
AccB7I CCANNNNNTGG 1 cut(s) 739
AccI GTMKAC 1 cut(s) 356
AccII CGCG 3 cut(s) 24, 207, 290
AclI AACGTT 1 cut(s) 619
AclWI GGATC 8 cut(s) 20, 321, 334, 365, 378, 626, 907, 911
AcoI YGGCCR 1 cut(s) 65
AcsI RAATTY 1 cut(s) 134
AcuI CTGAAG 1 cut(s) 648
AcvI CACGTG 1 cut(s) 857
AcyI GRCGYC 1 cut(s) 108
AdeI CACNNNGTG 1 cut(s) 860
AfaI GTAC 2 cut(s) 656, 969
AfiI CCNNNNNNNGG 5 cut(s) 323, 564, 698, 739, 800
AflIII ACRYGT 1 cut(s) 210
AgsI TTSAA 2 cut(s) 617, 791
AhlI ACTAGT 1 cut(s) 230
AjnI CCWGG 2 cut(s) 62, 973
AjuI GAANNNNNNNTTGG 2 cut(s) 939, 971
AluBI AGCT 8 cut(s) 32, 241, 303, 542, 570, 748, 762, 887
AluI AGCT 8 cut(s) 32, 241, 303, 542, 570, 748, 762, 887
Alw21I GWGCWC 1 cut(s) 305
Alw26I GTCTC 1 cut(s) 108
AlwI GGATC 8 cut(s) 20, 321, 334, 365, 378, 626, 907, 911
Ama87I CYCGRG 2 cut(s) 413, 693
AoxI GGCC 4 cut(s) 65, 312, 661, 730
ApeKI GCWGC 9 cut(s) 273, 276, 279, 282, 460, 579, 745, 748, 887
ApoI RAATTY 1 cut(s) 134
Asp700I GAANNNNTTC 2 cut(s) 832, 951
AspLEI GCGC 2 cut(s) 86, 745
AspS9I GGNCC 2 cut(s) 313, 393
AsuC2I CCSGG 5 cut(s) 77, 155, 311, 694, 695
AsuHPI GGTGA 3 cut(s) 88, 121, 872
AvaI CYCGRG 2 cut(s) 413, 693
AvaII GGWCC 1 cut(s) 393
BalI TGGCCA 1 cut(s) 67
BamHI GGATCC 2 cut(s) 326, 370
BanII GRGCYC 1 cut(s) 305
BbrPI CACGTG 1 cut(s) 857
Bbv12I GWGCWC 1 cut(s) 305
BbvI GCAGC 9 cut(s) 285, 288, 291, 294, 472, 566, 735, 757, 874
BccI CCATC 1 cut(s) 503
BceAI ACGGC 2 cut(s) 175, 190
BciT130I CCWGG 2 cut(s) 64, 975
BclI TGATCA 2 cut(s) 496, 880
BcnI CCSGG 5 cut(s) 77, 155, 311, 694, 695
BcoDI GTCTC 1 cut(s) 108
BcuI ACTAGT 1 cut(s) 230
BfaI CTAG 2 cut(s) 33, 231
BfmI CTRYAG 3 cut(s) 888, 930, 939
BfoI RGCGCY 1 cut(s) 87
Bme1390I CCNGG 7 cut(s) 64, 77, 155, 311, 694, 695, 975
Bme18I GGWCC 1 cut(s) 393
BmeT110I CYCGRG 2 cut(s) 413, 693
BmgT120I GGNCC 2 cut(s) 313, 393
BmiI GGNNCC 6 cut(s) 163, 202, 315, 328, 372, 394
BmrFI CCNGG 7 cut(s) 64, 77, 155, 311, 694, 695, 975
BmsI GCATC 2 cut(s) 857, 969
BpmI CTGGAG 3 cut(s) 148, 346, 738
BpuEI CTTGAG 2 cut(s) 524, 696
BpuMI CCSGG 5 cut(s) 77, 155, 311, 694, 695
Bsa29I ATCGAT 1 cut(s) 988
BsaAI YACGTR 1 cut(s) 857
BsaBI GATNNNNATC 1 cut(s) 879
BsaHI GRCGYC 1 cut(s) 108
BsaJI CCNNGG 6 cut(s) 288, 563, 692, 693, 694, 974
Bsc4I CCNNNNNNNGG 5 cut(s) 323, 564, 698, 739, 800
Bse1I ACTGG 1 cut(s) 755
Bse8I GATNNNNATC 1 cut(s) 879
BseBI CCWGG 2 cut(s) 64, 975
BseCI ATCGAT 1 cut(s) 988
BseDI CCNNGG 6 cut(s) 288, 563, 692, 693, 694, 974
BseGI GGATG 4 cut(s) 514, 848, 877, 984
BseJI GATNNNNATC 1 cut(s) 879
BseLI CCNNNNNNNGG 5 cut(s) 323, 564, 698, 739, 800
BseMII CTCAG 1 cut(s) 68
BseNI ACTGG 1 cut(s) 755
BseRI GAGGAG 2 cut(s) 116, 909
BseXI GCAGC 9 cut(s) 285, 288, 291, 294, 472, 566, 735, 757, 874
BsgI GTGCAG 1 cut(s) 565
Bsh1236I CGCG 3 cut(s) 24, 207, 290
Bsh1285I CGRYCG 2 cut(s) 42, 198
BshFI GGCC 4 cut(s) 67, 314, 663, 732
BshVI ATCGAT 1 cut(s) 988
BsiEI CGRYCG 2 cut(s) 42, 198
BsiHKAI GWGCWC 1 cut(s) 305
BsiHKCI CYCGRG 2 cut(s) 413, 693
BsiSI CCGG 5 cut(s) 77, 155, 311, 457, 694
BsiWI CGTACG 1 cut(s) 654
BslFI GGGAC 2 cut(s) 540, 974
BslI CCNNNNNNNGG 5 cut(s) 323, 564, 698, 739, 800
BsmAI GTCTC 1 cut(s) 108
BsmFI GGGAC 2 cut(s) 540, 974
BsmI GAATGC 1 cut(s) 686
BsnI GGCC 4 cut(s) 67, 314, 663, 732
BsoBI CYCGRG 2 cut(s) 413, 693
Bsp1286I GDGCHC 1 cut(s) 305
Bsp143I GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
BspANI GGCC 4 cut(s) 67, 314, 663, 732
BspCNI CTCAG 1 cut(s) 67
BspDI ATCGAT 1 cut(s) 988
BspFNI CGCG 3 cut(s) 24, 207, 290
BspLI GGNNCC 6 cut(s) 163, 202, 315, 328, 372, 394
BspMAI CTGCAG 2 cut(s) 892, 934
BspPI GGATC 8 cut(s) 20, 321, 334, 365, 378, 626, 907, 911
BsrI ACTGG 1 cut(s) 755
BssECI CCNNGG 6 cut(s) 288, 563, 692, 693, 694, 974
BssMI GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
BssNI GRCGYC 1 cut(s) 108
BssT1I CCWWGG 1 cut(s) 563
Bst2UI CCWGG 2 cut(s) 64, 975
Bst4CI ACNGT 4 cut(s) 554, 601, 671, 682
Bst6I CTCTTC 1 cut(s) 443
BstACI GRCGYC 1 cut(s) 108
BstBAI YACGTR 1 cut(s) 857
BstC8I GCNNGC 3 cut(s) 239, 521, 730
BstDEI CTNAG 1 cut(s) 54
BstDSI CCRYGG 1 cut(s) 288
BstENI CCTNNNNNAGG 1 cut(s) 562
BstF5I GGATG 4 cut(s) 514, 848, 877, 984
BstFNI CGCG 3 cut(s) 24, 207, 290
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 2 cut(s) 86, 745
BstKTI GATC 9 cut(s) 28, 198, 329, 373, 499, 634, 883, 902, 919
BstMAI GTCTC 1 cut(s) 108
BstMBI GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
BstMCI CGRYCG 2 cut(s) 42, 198
BstMWI GCNNNNNNNGC 4 cut(s) 279, 282, 576, 588
BstNI CCWGG 2 cut(s) 64, 975
BstNSI RCATGY 1 cut(s) 214
BstSCI CCNGG 7 cut(s) 62, 75, 153, 309, 692, 693, 973
BstSFI CTRYAG 3 cut(s) 888, 930, 939
BstUI CGCG 3 cut(s) 24, 207, 290
BstV1I GCAGC 9 cut(s) 285, 288, 291, 294, 472, 566, 735, 757, 874
BstX2I RGATCY 3 cut(s) 326, 370, 631
BstYI RGATCY 3 cut(s) 326, 370, 631
Bsu15I ATCGAT 1 cut(s) 988
BsuRI GGCC 4 cut(s) 67, 314, 663, 732
BsuTUI ATCGAT 1 cut(s) 988
BtgI CCRYGG 1 cut(s) 288
BtsCI GGATG 4 cut(s) 514, 848, 877, 984
BtsI GCAGTG 1 cut(s) 907
BtsIMutI CAGTG 3 cut(s) 606, 667, 907
Cac8I GCNNGC 3 cut(s) 239, 521, 730
CfoI GCGC 2 cut(s) 86, 745
Cfr13I GGNCC 2 cut(s) 313, 393
Cfr42I CCGCGG 1 cut(s) 291
Cfr9I CCCGGG 1 cut(s) 693
ClaI ATCGAT 1 cut(s) 988
Csp6I GTAC 2 cut(s) 655, 968
CviAII CATG 2 cut(s) 211, 772
CviQI GTAC 2 cut(s) 655, 968
DdeI CTNAG 1 cut(s) 54
DpnI GATC 9 cut(s) 27, 197, 328, 372, 498, 633, 882, 901, 918
DpnII GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
DraIII CACNNNGTG 1 cut(s) 860
EaeI YGGCCR 1 cut(s) 65
Eam1104I CTCTTC 1 cut(s) 443
EarI CTCTTC 1 cut(s) 443
EciI GGCGGA 3 cut(s) 363, 538, 714
Ecl136II GAGCTC 1 cut(s) 303
Eco130I CCWWGG 1 cut(s) 563
Eco24I GRGCYC 1 cut(s) 305
Eco47I GGWCC 1 cut(s) 393
Eco53kI GAGCTC 1 cut(s) 303
Eco57I CTGAAG 1 cut(s) 648
Eco72I CACGTG 1 cut(s) 857
Eco88I CYCGRG 2 cut(s) 413, 693
EcoICRI GAGCTC 1 cut(s) 303
EcoNI CCTNNNNNAGG 1 cut(s) 562
EcoRI GAATTC 1 cut(s) 134
EcoRII CCWGG 2 cut(s) 62, 973
EcoT14I CCWWGG 1 cut(s) 563
EcoT38I GRGCYC 1 cut(s) 305
ErhI CCWWGG 1 cut(s) 563
FaeI CATG 2 cut(s) 214, 775
FaiI YATR 5 cut(s) 212, 479, 531, 678, 773
FalI AAGNNNNNCTT 4 cut(s) 817, 849, 939, 971
FaqI GGGAC 2 cut(s) 540, 974
FatI CATG 2 cut(s) 210, 771
FauI CCCGC 2 cut(s) 212, 271
FbaI TGATCA 2 cut(s) 496, 880
FblI GTMKAC 1 cut(s) 356
FokI GGATG 3 cut(s) 521, 835, 884
FriOI GRGCYC 1 cut(s) 305
FspBI CTAG 2 cut(s) 33, 231
GlaI GCGC 2 cut(s) 85, 744
GsuI CTGGAG 3 cut(s) 148, 346, 738
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 4 cut(s) 67, 314, 663, 732
HapII CCGG 5 cut(s) 77, 155, 311, 457, 694
HhaI GCGC 2 cut(s) 86, 745
Hin1I GRCGYC 1 cut(s) 108
Hin1II CATG 2 cut(s) 214, 775
Hin6I GCGC 2 cut(s) 84, 743
HinP1I GCGC 2 cut(s) 84, 743
HincII GTYRAC 2 cut(s) 357, 817
HindII GTYRAC 2 cut(s) 357, 817
HinfI GANTC 3 cut(s) 52, 453, 716
HpaI GTTAAC 1 cut(s) 817
HpaII CCGG 5 cut(s) 77, 155, 311, 457, 694
HphI GGTGA 3 cut(s) 88, 121, 872
Hpy166II GTNNAC 4 cut(s) 48, 60, 357, 817
Hpy188I TCNGA 8 cut(s) 113, 184, 200, 217, 300, 307, 326, 628
Hpy188III TCNNGA 4 cut(s) 49, 165, 503, 713
Hpy8I GTNNAC 4 cut(s) 48, 60, 357, 817
Hpy99I CGWCG 8 cut(s) 11, 110, 176, 323, 326, 358, 401, 655
HpyAV CCTTC 4 cut(s) 433, 653, 794, 941
HpyCH4III ACNGT 4 cut(s) 554, 601, 671, 682
HpyCH4IV ACGT 4 cut(s) 108, 619, 653, 856
HpyCH4V TGCA 8 cut(s) 473, 582, 597, 686, 728, 785, 890, 932
HpyF10VI GCNNNNNNNGC 4 cut(s) 279, 282, 576, 588
HpyF3I CTNAG 1 cut(s) 54
HpySE526I ACGT 4 cut(s) 108, 619, 653, 856
Hsp92I GRCGYC 1 cut(s) 108
Hsp92II CATG 2 cut(s) 214, 775
HspAI GCGC 2 cut(s) 84, 743
Ksp22I TGATCA 2 cut(s) 496, 880
KspAI GTTAAC 1 cut(s) 817
KspI CCGCGG 1 cut(s) 291
Kzo9I GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
LmnI GCTCC 4 cut(s) 167, 300, 308, 567
Lsp1109I GCAGC 9 cut(s) 285, 288, 291, 294, 472, 566, 735, 757, 874
LweI GCATC 2 cut(s) 857, 969
MaeI CTAG 2 cut(s) 33, 231
MaeII ACGT 4 cut(s) 108, 619, 653, 856
MalI GATC 9 cut(s) 27, 197, 328, 372, 498, 633, 882, 901, 918
MboI GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
MboII GAAGA 4 cut(s) 85, 460, 616, 641
MfeI CAATTG 1 cut(s) 639
MflI RGATCY 3 cut(s) 326, 370, 631
MhlI GDGCHC 1 cut(s) 305
MlsI TGGCCA 1 cut(s) 67
MluCI AATT 5 cut(s) 134, 639, 645, 786, 842
MluNI TGGCCA 1 cut(s) 67
MlyI GAGTC 1 cut(s) 46
MmeI TCCRAC 2 cut(s) 304, 330
Mox20I TGGCCA 1 cut(s) 67
MroXI GAANNNNTTC 2 cut(s) 832, 951
MscI TGGCCA 1 cut(s) 67
MseI TTAA 2 cut(s) 432, 816
Msp20I TGGCCA 1 cut(s) 67
MspA1I CMGCKG 3 cut(s) 290, 519, 748
MspI CCGG 5 cut(s) 77, 155, 311, 457, 694
MspR9I CCNGG 7 cut(s) 64, 77, 155, 311, 694, 695, 975
MunI CAATTG 1 cut(s) 639
Mva1269I GAATGC 1 cut(s) 686
MvaI CCWGG 2 cut(s) 64, 975
MvnI CGCG 3 cut(s) 24, 207, 290
MwoI GCNNNNNNNGC 4 cut(s) 279, 282, 576, 588
NciI CCSGG 5 cut(s) 77, 155, 311, 694, 695
NdeII GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
NlaIII CATG 2 cut(s) 214, 775
NlaIV GGNNCC 6 cut(s) 163, 202, 315, 328, 372, 394
NspI RCATGY 1 cut(s) 214
PciI ACATGT 1 cut(s) 210
PcsI WCGNNNNNNNCGW 2 cut(s) 204, 341
PctI GAATGC 1 cut(s) 686
PdmI GAANNNNTTC 2 cut(s) 832, 951
PfeI GAWTC 2 cut(s) 453, 716
Pfl23II CGTACG 1 cut(s) 654
PflFI GACNNNGTC 1 cut(s) 55
PflMI CCANNNNNTGG 1 cut(s) 739
Ple19I CGATCG 1 cut(s) 198
PleI GAGTC 1 cut(s) 46
PmaCI CACGTG 1 cut(s) 857
PmlI CACGTG 1 cut(s) 857
PpsI GAGTC 1 cut(s) 46
Ppu21I YACGTR 1 cut(s) 857
PscI ACATGT 1 cut(s) 210
Psp124BI GAGCTC 1 cut(s) 305
Psp1406I AACGTT 1 cut(s) 619
Psp6I CCWGG 2 cut(s) 62, 973
PspCI CACGTG 1 cut(s) 857
PspGI CCWGG 2 cut(s) 62, 973
PspLI CGTACG 1 cut(s) 654
PspN4I GGNNCC 6 cut(s) 163, 202, 315, 328, 372, 394
PspPI GGNCC 2 cut(s) 313, 393
PstI CTGCAG 2 cut(s) 892, 934
PsuI RGATCY 3 cut(s) 326, 370, 631
PsyI GACNNNGTC 1 cut(s) 55
PvuI CGATCG 1 cut(s) 198
PvuII CAGCTG 1 cut(s) 748
RsaI GTAC 2 cut(s) 656, 969
RsaNI GTAC 2 cut(s) 655, 968
SacI GAGCTC 1 cut(s) 305
SacII CCGCGG 1 cut(s) 291
SalI GTCGAC 1 cut(s) 355
SaqAI TTAA 2 cut(s) 432, 816
Sau3AI GATC 9 cut(s) 25, 195, 326, 370, 496, 631, 880, 899, 916
Sau96I GGNCC 2 cut(s) 313, 393
SchI GAGTC 1 cut(s) 46
ScrFI CCNGG 7 cut(s) 64, 77, 155, 311, 694, 695, 975
SduI GDGCHC 1 cut(s) 305
SfaNI GCATC 2 cut(s) 857, 969
SfcI CTRYAG 3 cut(s) 888, 930, 939
Sfr303I CCGCGG 1 cut(s) 291
SgrBI CCGCGG 1 cut(s) 291
SinI GGWCC 1 cut(s) 393
SmaI CCCGGG 1 cut(s) 695
SmlI CTYRAG 2 cut(s) 503, 711
SmoI CTYRAG 2 cut(s) 503, 711
SpeI ACTAGT 1 cut(s) 230
Sse9I AATT 5 cut(s) 134, 639, 645, 786, 842
SspMI CTAG 2 cut(s) 33, 231
SstI GAGCTC 1 cut(s) 305
StyD4I CCNGG 7 cut(s) 62, 75, 153, 309, 692, 693, 973
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 4 cut(s) 554, 601, 671, 682
TaiI ACGT 4 cut(s) 111, 622, 656, 859
TaqI TCGA 4 cut(s) 72, 335, 356, 988
TaqII GACCGA 1 cut(s) 56
TasI AATT 5 cut(s) 134, 639, 645, 786, 842
TauI GCSGC 2 cut(s) 227, 293
TfiI GAWTC 2 cut(s) 453, 716
Tru1I TTAA 2 cut(s) 432, 816
Tru9I TTAA 2 cut(s) 432, 816
TscAI CASTG 3 cut(s) 606, 674, 914
TseI GCWGC 9 cut(s) 273, 276, 279, 282, 460, 579, 745, 748, 887
TspDTI ATGAA 3 cut(s) 353, 760, 960
TspGWI ACGGA 1 cut(s) 385
TspMI CCCGGG 1 cut(s) 693
TspRI CASTG 3 cut(s) 606, 674, 914
Tth111I GACNNNGTC 1 cut(s) 55
Van91I CCANNNNNTGG 1 cut(s) 739
VpaK11BI GGWCC 1 cut(s) 393
XagI CCTNNNNNAGG 1 cut(s) 562
XapI RAATTY 1 cut(s) 134
XceI RCATGY 1 cut(s) 214
XmaI CCCGGG 1 cut(s) 693
XmiI GTMKAC 1 cut(s) 356
XmnI GAANNNNTTC 2 cut(s) 832, 951
XspI CTAG 2 cut(s) 33, 231
ZraI GACGTC 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.