AT1G69680

Mog1 PsbP DUF1795, alpha beta alpha sandwich (InterPro IPR016124), Ran-interacting Mog1 protein (InterPro IPR007681), Mog1 PsbP, alpha beta alpha sandwich (InterPro IPR016123)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0014591
Physical Location & Seq
Forward (+)
26204805 .. 26206991
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G69680.1

Sequence Viewer

Length: 609 bp
ATGTCTGTTGAGTTATGTTCGGTGAGGCCTTTGTTTGGTGGCGCTATTTCCACCGTCTTCCCTCAAAGATTTCAGGATGTGAGTAATATCCGACAAGTTCCAGATCATCAGGAAGTGTTTGTGGATCCTTCAAGAGATGAGAGTTTGATTTTTGAGTTGTTGGATTTCAAGGCTGAGGTTGGTGACATTGGCAGTGCCTCTTGGTTCCTTAATGATCTTGCGAGTGAGCAAGATGCTGAAGGATTTCAGTTGATTGAGCAATCAGAGGTCATTGAGGCGCCTGGACTGTCTTTCAGAAACATCTCTGCTGTTGCGACAACTGCTATTGGAGAGATGGCTATATCCAAAGGAAGACAGGGAAGAGAAGCACAAAACCTAGTGAGAGTATATGTGGCAAATATTCGTCTTAAGGGAGTTGATACAGATGTCTTAGTGACTGCCTATGAACCTATCCTGATAAATCCTCTGAGCGAAAGCGCGGATGCTGTGGGATCTGGTTTAGCTGTCCCAGCTTCACAATCTGGAAAAATGCCAATGTGTGATATCATTAAACAATCACTCTCTACATTCAAAGTCAATGACTGGAATCTTTTCGGTTCCTCAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mog1

Protein Analysis

202

Amino Acids

21.87

Weight (kDa)

4.43

Isoelectric Point (pI)

51.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mog1 PF04603 9 - 150 1.1e-41 Ran-interacting Mog1 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014591)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69680
fragaria_vesca FvH4_2g13310 FvH4_4g31510
malus_domestica MD13G1073400.v1.1 MD16G1074700.v1.1
prunus_persica Prupe.1G272700_v2.0.a1
pyrus_communis pycom13g06570
rosa_chinensis RchiOBHm_Chr4g0440001
rosa_laevigata RLG00000006216
rosa_multiflora Rmu_sc0006000.1_g000008
rosa_roxburghii Rroxscaffold_5G00380950
rosa_rugosa Rorug04G0323100 Rorug04G0323200
rosa_samantha Rh4BG386500 Rh4CG401000 Rh4DG380800
rosa_wichuraiana Rw4G032010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 277
AccII CGCG 1 cut(s) 479
AciI CCGC 1 cut(s) 479
AclWI GGATC 3 cut(s) 119, 132, 499
AcuI CTGAAG 1 cut(s) 258
AcyI GRCGYC 1 cut(s) 278
AfiI CCNNNNNNNGG 1 cut(s) 35
AflII CTTAAG 1 cut(s) 407
AgsI TTSAA 3 cut(s) 132, 169, 571
AjnI CCWGG 1 cut(s) 280
AluBI AGCT 3 cut(s) 503, 512, 605
AluI AGCT 3 cut(s) 503, 512, 605
AlwI GGATC 3 cut(s) 119, 132, 499
AoxI GGCC 1 cut(s) 26
Asp700I GAANNNNTTC 2 cut(s) 243, 590
AspLEI GCGC 3 cut(s) 44, 280, 479
AsuHPI GGTGA 2 cut(s) 34, 194
BaeI ACNNNNGTAYC 2 cut(s) 411, 444
BamHI GGATCC 1 cut(s) 124
BanI GGYRCC 1 cut(s) 277
BbsI GAAGAC 2 cut(s) 49, 358
BbvCI CCTCAGC 2 cut(s) 174, 601
BccI CCATC 1 cut(s) 328
BciT130I CCWGG 1 cut(s) 282
BfaI CTAG 1 cut(s) 377
BfoI RGCGCY 2 cut(s) 45, 281
BfrI CTTAAG 1 cut(s) 407
Bme1390I CCNGG 1 cut(s) 282
BmiI GGNNCC 4 cut(s) 126, 206, 279, 598
BmrFI CCNGG 1 cut(s) 282
BmsI GCATC 2 cut(s) 223, 472
BpiI GAAGAC 2 cut(s) 49, 358
Bpu10I CCTNAGC 2 cut(s) 174, 601
BsaHI GRCGYC 1 cut(s) 278
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse1I ACTGG 1 cut(s) 587
BseBI CCWGG 1 cut(s) 282
BseGI GGATG 2 cut(s) 82, 487
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMII CTCAG 2 cut(s) 165, 458
BseNI ACTGG 1 cut(s) 587
BseYI CCCAGC 1 cut(s) 508
Bsh1236I CGCG 1 cut(s) 479
BshFI GGCC 1 cut(s) 28
BshNI GGYRCC 1 cut(s) 277
BslFI GGGAC 1 cut(s) 491
BslI CCNNNNNNNGG 1 cut(s) 35
BsmFI GGGAC 1 cut(s) 491
BsnI GGCC 1 cut(s) 28
Bsp143I GATC 4 cut(s) 103, 124, 214, 491
BspACI CCGC 1 cut(s) 479
BspANI GGCC 1 cut(s) 28
BspCNI CTCAG 2 cut(s) 166, 459
BspFNI CGCG 1 cut(s) 479
BspLI GGNNCC 4 cut(s) 126, 206, 279, 598
BspPI GGATC 3 cut(s) 119, 132, 499
BspT107I GGYRCC 1 cut(s) 277
BspTI CTTAAG 1 cut(s) 407
BsrI ACTGG 1 cut(s) 587
BssMI GATC 4 cut(s) 103, 124, 214, 491
BssNI GRCGYC 1 cut(s) 278
Bst2UI CCWGG 1 cut(s) 282
Bst4CI ACNGT 2 cut(s) 55, 288
Bst6I CTCTTC 1 cut(s) 355
BstACI GRCGYC 1 cut(s) 278
BstAFI CTTAAG 1 cut(s) 407
BstDEI CTNAG 4 cut(s) 174, 430, 467, 601
BstF5I GGATG 2 cut(s) 82, 487
BstFNI CGCG 1 cut(s) 479
BstH2I RGCGCY 2 cut(s) 45, 281
BstHHI GCGC 3 cut(s) 44, 280, 479
BstKTI GATC 4 cut(s) 106, 127, 217, 494
BstMBI GATC 4 cut(s) 103, 124, 214, 491
BstMWI GCNNNNNNNGC 2 cut(s) 320, 509
BstNI CCWGG 1 cut(s) 282
BstSCI CCNGG 1 cut(s) 280
BstUI CGCG 1 cut(s) 479
BstV2I GAAGAC 2 cut(s) 49, 358
BstX2I RGATCY 2 cut(s) 124, 491
BstYI RGATCY 2 cut(s) 124, 491
BsuRI GGCC 1 cut(s) 28
BtsCI GGATG 2 cut(s) 82, 487
BtsI GCAGTG 1 cut(s) 199
BtsIMutI CAGTG 1 cut(s) 199
CfoI GCGC 3 cut(s) 44, 280, 479
CviJI RGCY 6 cut(s) 28, 173, 338, 503, 512, 605
CviKI_1 RGCY 6 cut(s) 28, 173, 338, 503, 512, 605
DdeI CTNAG 4 cut(s) 174, 430, 467, 601
DinI GGCGCC 1 cut(s) 279
DpnI GATC 4 cut(s) 105, 126, 216, 493
DpnII GATC 4 cut(s) 103, 124, 214, 491
Eam1104I CTCTTC 1 cut(s) 355
EarI CTCTTC 1 cut(s) 355
Eco147I AGGCCT 1 cut(s) 28
Eco32I GATATC 1 cut(s) 544
Eco57I CTGAAG 1 cut(s) 258
EcoRII CCWGG 1 cut(s) 280
EcoRV GATATC 1 cut(s) 544
EgeI GGCGCC 1 cut(s) 279
EheI GGCGCC 1 cut(s) 279
FaiI YATR 5 cut(s) 16, 341, 388, 390, 444
FaqI GGGAC 1 cut(s) 491
FokI GGATG 2 cut(s) 89, 494
FspBI CTAG 1 cut(s) 377
GlaI GCGC 3 cut(s) 43, 279, 478
GsaI CCCAGC 1 cut(s) 512
HaeII RGCGCY 2 cut(s) 45, 281
HaeIII GGCC 1 cut(s) 28
HhaI GCGC 3 cut(s) 44, 280, 479
Hin1I GRCGYC 1 cut(s) 278
Hin6I GCGC 3 cut(s) 42, 278, 477
HinP1I GCGC 3 cut(s) 42, 278, 477
HinfI GANTC 1 cut(s) 586
HphI GGTGA 2 cut(s) 34, 194
Hpy188I TCNGA 4 cut(s) 92, 265, 296, 468
Hpy188III TCNNGA 6 cut(s) 74, 101, 110, 132, 454, 522
HpyAV CCTTC 2 cut(s) 138, 233
HpyCH4III ACNGT 2 cut(s) 55, 288
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 509
HpyF3I CTNAG 4 cut(s) 174, 430, 467, 601
Hsp92I GRCGYC 1 cut(s) 278
HspAI GCGC 3 cut(s) 42, 278, 477
KasI GGCGCC 1 cut(s) 277
Kzo9I GATC 4 cut(s) 103, 124, 214, 491
LweI GCATC 2 cut(s) 223, 472
MaeI CTAG 1 cut(s) 377
MaeIII GTNAC 2 cut(s) 182, 433
MalI GATC 4 cut(s) 105, 126, 216, 493
MboI GATC 4 cut(s) 103, 124, 214, 491
MboII GAAGA 3 cut(s) 49, 363, 372
MflI RGATCY 2 cut(s) 124, 491
Mly113I GGCGCC 1 cut(s) 278
MmeI TCCRAC 2 cut(s) 115, 141
MnlI CCTC 7 cut(s) 18, 72, 169, 208, 259, 268, 474
MroXI GAANNNNTTC 2 cut(s) 243, 590
MseI TTAA 3 cut(s) 210, 408, 549
MspCI CTTAAG 1 cut(s) 407
MspR9I CCNGG 1 cut(s) 282
MvaI CCWGG 1 cut(s) 282
MvnI CGCG 1 cut(s) 479
MwoI GCNNNNNNNGC 2 cut(s) 320, 509
NarI GGCGCC 1 cut(s) 278
NdeII GATC 4 cut(s) 103, 124, 214, 491
NlaIV GGNNCC 4 cut(s) 126, 206, 279, 598
NmuCI GTSAC 2 cut(s) 182, 433
PceI AGGCCT 1 cut(s) 28
PdmI GAANNNNTTC 2 cut(s) 243, 590
PfeI GAWTC 1 cut(s) 586
PluTI GGCGCC 1 cut(s) 281
Psp6I CCWGG 1 cut(s) 280
PspFI CCCAGC 1 cut(s) 508
PspGI CCWGG 1 cut(s) 280
PspN4I GGNNCC 4 cut(s) 126, 206, 279, 598
PsuI RGATCY 2 cut(s) 124, 491
SaqAI TTAA 3 cut(s) 210, 408, 549
Sau3AI GATC 4 cut(s) 103, 124, 214, 491
ScrFI CCNGG 1 cut(s) 282
SetI ASST 7 cut(s) 180, 270, 378, 451, 505, 514, 607
SfaNI GCATC 2 cut(s) 223, 472
SfoI GGCGCC 1 cut(s) 279
SmlI CTYRAG 1 cut(s) 407
SmoI CTYRAG 1 cut(s) 407
SseBI AGGCCT 1 cut(s) 28
SsiI CCGC 1 cut(s) 479
SspDI GGCGCC 1 cut(s) 277
SspI AATATT 1 cut(s) 400
SspMI CTAG 1 cut(s) 377
StuI AGGCCT 1 cut(s) 28
StyD4I CCNGG 1 cut(s) 280
TaaI ACNGT 2 cut(s) 55, 288
TfiI GAWTC 1 cut(s) 586
Tru1I TTAA 3 cut(s) 210, 408, 549
Tru9I TTAA 3 cut(s) 210, 408, 549
TscAI CASTG 1 cut(s) 199
TseFI GTSAC 2 cut(s) 182, 433
Tsp45I GTSAC 2 cut(s) 182, 433
TspDTI ATGAA 1 cut(s) 459
TspRI CASTG 1 cut(s) 199
Vha464I CTTAAG 1 cut(s) 407
XmnI GAANNNNTTC 2 cut(s) 243, 590
XspI CTAG 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.