Rorug04G0323100

Ran guanine nucleotide release

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
49845019 .. 49851279
6261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0323100.1

Sequence Viewer

Length: 3012 bp
ATGCAATCAGGCTCAGGATATAATATTAATGACCTCTTTCAAGAGGCTCAAAGCCGGTGGCTGAAGCCGGCCGAAGTGCTATTCATATTGCAGAATCATGAGAAGTATAAGGTCACCCCAGAGCCTCCTCAACAACCTGTTAGTGGGTCTTTGTTTCTTTTTAACAAAAGGATCCTTCGGTTTTTCCGTAGAGACGGGCACCGTTGGCGTAAAAAGAAGGATGGGAGAACTGTTGGTGAAGCACATGAACGGCTTAAGGTTGGAAACGTTGAGACATTGAATTGTTATTATGCGCATGGGGAGGACAATCCGAATTTTCAGAGGCGCAGCTATTGGATGTTGGATCCGGCATATGAGCACATTGTTCTTGTTCATTATAGGGAAATTAGTGAGGTGAAGCCCGGTACAGGATCGTTTATACAATCACCAGTTTCCTCTTCTTCCCTCAGCCAGAGTCCAATCTCGAATACTACACAACATCCAGGATCTGTCTCCATGATTAGTGAGTTGTATGAACCTTATACGAGTCCAGGTTCTGTAGAAGTTAGTTCAGATCTAGTCATCAAGAAAAATGGAAGAGAGAGCGTAGAGAACTTATATAGAACAGGGGAGTCAGATAGTTCATCTAAGGCTGATGTTAGTCAAGCTTTGCGGCGACTAGAGGAGCAGTTAAGTTTAAATGATGATAGCTTCAACGAATTTGTGGATGATAATCCAGATGGTTCAGATATCCCGGAATACCCTAGTGATCAGTTTACTGCCTTCCATGGACAAGACCATATTGTTCACGATCAGTTCTATAGTGGGCATTCTCTGATGCAAGGGAATGCAGACAATAGTTCAGATATCTTGGATTACCATAATGATATCGTCAATCAGGATCAGTTTACTCCCTTCCATGGACCAGAACACATTGTAAATGATCAGTTTTACAGTGGACGTGCTCAGATGCAAAATAATGTAGACCTTAGTGGTAAACATCATCAATTAATTGGTCATGAATTTGCAGATGGAAACAAAGAATCAGCATCTTGGAAGGAGGTTCTGAATTCATCTAAGACTTCATCAGTTGTGGAGCCCCAGGAGACAGGCTTGTATACATTGGACAGAAATGAAAAACTATCTTCATCATTGACTGGTCCAAATGGGGCGTTTGAATATCCTTCTTTGTCGCGTCCTCAAGAAGTTGACATTTTCAAGTCTCCATTTTCGTCTGCAATAGAAACACATTCAGACTACTTTACATCATTTTTTGAGCAAGGACAAATGGGAAATCTTGAATCAGATATCAGTTTGACTGTTGCACAGACGCAAAAGTTTACAATCCGGGAAATTTCCCCAGAATGGGGTGATGCCAACGAACCCACAAAGGTCATTGTTATTGGATCTTTTCTGTGCGATCCATCAGAATCTGCATGGACTTGTATGTTTGGCAACGTTGAAGTTCCTGCTCAGATCATTCAAGAAGGTGTAATCCGTTGTGAAGCTCCCCCTCACCTTCCTGGGAAGGTGACACTCTGCATTACTATAGGCAATCGGGAGTCCTGCAGTGAAGTTAGGGAATTTGAGTATCGCGATAAGAGCAGTAGGTCTACTCCAAATAATTCACCTCCAAAAGAATCTAGTAGGAGTGCAGAAGAACTTTTATTACTCGTCAGATTTGCTCAAATTCTCTTGTCTGATTCATCAGTGCAGAAAAGAGACACTGTTGAGTCTGAGTTTGTGAGAAAATCGAAAGCTGACGATGATACTTGGGGTAGTATTATTGAGGCTCTCTTAGTAGGCAGTGGAAGTTCATCTAGTACCATATATTGGCTTCTGGAAGAGTTTCTAAAAGACAAGTTGGAGCAATGGCTTTCCTCCAGATCCCAGGGACTTGAAAAGACAGATTGTTCCTTATCCAGGAAAGAGCAAGGCATGATACACATGGTTGCTGGGTTGGGCTTTGAGTGGGCATTAAACCCAATACTCGATCTTGGAGTCAATATAAATTTCCGGGATATAAACGGGTGGACTGCACTACATTGGGCTGCGCGTTTTGGAAGGGAAAAGATGGTTGCTGTACTGGTTGCTTCTGGTGCTTCAGCTGGAGCAGTGACTGATCCCAATTCCCAAGATCCCATAGGCAAAACTCCGGCATCTATTGCAGCTATCCATGGGCATAAGGGACTTGCAGGTTATCTTTCAGAGGTGGCACTCACTAGCCATCTGTCATCCCTTACACTGGAGGAAAGTGAGATTTCCAGAGGCTGCGCTGAGATCGAAGCAGAAAAAACAATAAATAGCATCTCGAAGAGTAGCCTGGAGACTAATGAAGATCAGGCCCCCCTTAAGAACACCTTAGCTGCAGTCCGAAATGCAGCACAGGCTGCTGCACGCATACAATCTGCTTTTCGGGCACATTCTTTCAGAAGACGACAGCAGAAAGACGCTGGTGTTACTATAGACGATTATGGTATCAGTTCAGATGACATACTAGGCCTTTCAGCTATGTCAAAGCTAAACTTTCGTAATCCACGTGATTACAATTCAGCTGCATTATCTATCCAGAAGAAATACCGAGGCTGGAAAGGCCGCAAGGATTTCCTGGCGCTCCGCAAGAAAGTTGTCAAGATACAGGCACATGTGAGAGGTTATCAAGTTAGGAAGCACTACAAGGTAATCTGTTGGGCCGTTGGGATTCTGGACAAAGTTGTACTAAGGTGGCGGAGAAAAGGAGTTGGTCTGCGTGGTTTTCGGCATGAGGCAGAATCCACAGAATCAAGTGAAGACGAAGATATCCTCAAGGTTTTCCGCAAACAGAAAGTCGATGGAGCCATTGACGAGGCTGTCTCGCGGGTGTTGTCCATGGTCGAGTCCCCAGAGGCCCGTGAGCAATATCAGCGCATGCTGGAGGGGTACCATCAAGCTAAGGCTGAATTGGGTAGTAGCACTAGTGGTGAAGCAGGAGCACCAATTTCCCTCGAGGATTTCGTTAATATGGAAGACATTGATATGTATCAGTTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1003

Amino Acids

112.2

Weight (kDa)

5.54

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CG-1 PF03859 15 - 128 1.2e-48 CG-1 domain
TIG PF01833 441 - 518 1.4e-08 IPT/TIG domain
Ank_2 PF12796 642 - 729 8.5e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014591)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69680
fragaria_vesca FvH4_2g13310 FvH4_4g31510
malus_domestica MD13G1073400.v1.1 MD16G1074700.v1.1
prunus_persica Prupe.1G272700_v2.0.a1
pyrus_communis pycom13g06570
rosa_chinensis RchiOBHm_Chr4g0440001
rosa_laevigata RLG00000006216
rosa_multiflora Rmu_sc0006000.1_g000008
rosa_roxburghii Rroxscaffold_5G00380950
rosa_rugosa Rorug04G0323100 Rorug04G0323200
rosa_samantha Rh4BG386500 Rh4CG401000 Rh4DG380800
rosa_wichuraiana Rw4G032010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2828
AbsI CCTCGAGG 1 cut(s) 2963
Acc16I TGCGCA 1 cut(s) 294
Acc36I ACCTGC 1 cut(s) 2165
Acc65I GGTACC 1 cut(s) 2898
AccB1I GGYRCC 2 cut(s) 198, 2898
AccB7I CCANNNNNTGG 1 cut(s) 1812
AccI GTMKAC 3 cut(s) 963, 1097, 1592
AccII CGCG 4 cut(s) 1174, 1575, 2035, 2836
AciI CCGC 6 cut(s) 652, 2575, 2596, 2707, 2794, 2836
AclI AACGTT 2 cut(s) 267, 1437
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 8 cut(s) 313, 698, 1001, 1048, 1332, 1562, 1668, 1990
AcuI CTGAAG 2 cut(s) 83, 2067
AcvI CACGTG 1 cut(s) 2519
AfaI GTAC 5 cut(s) 406, 1804, 2064, 2697, 2900
AfiI CCNNNNNNNGG 9 cut(s) 143, 407, 899, 1344, 1345, 1346, 1812, 1902, 2224
AflII CTTAAG 2 cut(s) 254, 2330
AflIII ACRYGT 1 cut(s) 2623
AhlI ACTAGT 1 cut(s) 2933
AjiI CACGTC 1 cut(s) 941
AjnI CCWGG 8 cut(s) 481, 529, 1080, 1501, 1869, 1901, 2301, 2586
Alw21I GWGCWC 3 cut(s) 360, 946, 2953
Alw26I GTCTC 8 cut(s) 186, 266, 496, 1079, 1206, 1695, 2300, 2836
AlwNI CAGNNNCTG 5 cut(s) 488, 536, 1412, 2099, 2250
Ama87I CYCGRG 1 cut(s) 2963
AoxI GGCC 6 cut(s) 69, 2322, 2479, 2572, 2670, 2865
ApeKI GCWGC 9 cut(s) 327, 2030, 2147, 2250, 2345, 2360, 2369, 2372, 2534
ApoI RAATTY 8 cut(s) 313, 698, 1001, 1048, 1332, 1562, 1668, 1990
ArsI GACNNNNNNTTYG 2 cut(s) 2790, 2822
AseI ATTAAT 2 cut(s) 27, 989
Asp700I GAANNNNTTC 1 cut(s) 1827
Asp718I GGTACC 1 cut(s) 2898
AspLEI GCGC 6 cut(s) 295, 327, 2035, 2255, 2593, 2886
AspS9I GGNCC 5 cut(s) 902, 1139, 2323, 2670, 2866
AsuC2I CCSGG 4 cut(s) 402, 734, 1328, 1997
AsuHPI GGTGA 9 cut(s) 106, 248, 406, 417, 1361, 1487, 1522, 1599, 2951
AvaI CYCGRG 1 cut(s) 2963
AvaII GGWCC 2 cut(s) 902, 1139
BaeGI GKGCMC 2 cut(s) 201, 2401
BamHI GGATCC 2 cut(s) 171, 343
BanI GGYRCC 2 cut(s) 198, 2898
BanII GRGCYC 1 cut(s) 1080
BbrPI CACGTG 1 cut(s) 2519
BbsI GAAGAC 3 cut(s) 2419, 2775, 2991
Bbv12I GWGCWC 3 cut(s) 360, 946, 2953
BbvCI CCTCAGC 1 cut(s) 446
BbvI GCAGC 9 cut(s) 339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BccI CCATC 8 cut(s) 215, 713, 1004, 1411, 2047, 2214, 2804, 2910
BceAI ACGGC 2 cut(s) 266, 2657
BciT130I CCWGG 8 cut(s) 483, 531, 1082, 1503, 1871, 1903, 2303, 2588
BclI TGATCA 2 cut(s) 748, 922
BcnI CCSGG 4 cut(s) 402, 734, 1328, 1997
BcoDI GTCTC 8 cut(s) 186, 266, 496, 1079, 1206, 1695, 2300, 2836
BcuI ACTAGT 1 cut(s) 2933
BfaI CTAG 8 cut(s) 557, 659, 744, 1623, 1800, 2202, 2477, 2934
BfmI CTRYAG 6 cut(s) 537, 799, 1527, 1546, 2346, 2442
BfoI RGCGCY 1 cut(s) 2594
BfrI CTTAAG 2 cut(s) 254, 2330
BfuAI ACCTGC 1 cut(s) 2165
BglII AGATCT 1 cut(s) 553
Bme18I GGWCC 2 cut(s) 902, 1139
BmeT110I CYCGRG 1 cut(s) 2963
BmgBI CACGTC 1 cut(s) 941
BmgT120I GGNCC 5 cut(s) 902, 1139, 2323, 2670, 2866
BmiI GGNNCC 7 cut(s) 173, 200, 345, 1077, 2325, 2815, 2900
BmsI GCATC 6 cut(s) 807, 939, 1037, 1342, 2147, 2295
BpiI GAAGAC 3 cut(s) 2419, 2775, 2991
BplI GAGNNNNNCTC 2 cut(s) 2816, 2848
BpmI CTGGAG 5 cut(s) 1846, 2109, 2246, 2324, 2912
Bpu10I CCTNAGC 4 cut(s) 13, 446, 2341, 2910
BpuEI CTTGAG 2 cut(s) 1164, 2768
BpuMI CCSGG 4 cut(s) 402, 734, 1328, 1997
BsaAI YACGTR 1 cut(s) 2519
BsaBI GATNNNNATC 2 cut(s) 711, 2997
BsaJI CCNNGG 9 cut(s) 766, 898, 1080, 1502, 1869, 1870, 2155, 2560, 2847
Bsc4I CCNNNNNNNGG 9 cut(s) 143, 407, 899, 1344, 1345, 1346, 1812, 1902, 2224
Bse118I RCCGGY 2 cut(s) 54, 67
Bse1I ACTGG 4 cut(s) 428, 1141, 2070, 2229
Bse3DI GCAATG 1 cut(s) 1856
Bse8I GATNNNNATC 2 cut(s) 711, 2997
BseBI CCWGG 8 cut(s) 483, 531, 1082, 1503, 1871, 1903, 2303, 2588
BseDI CCNNGG 9 cut(s) 766, 898, 1080, 1502, 1869, 1870, 2155, 2560, 2847
BseGI GGATG 5 cut(s) 226, 342, 478, 712, 2213
BseJI GATNNNNATC 2 cut(s) 711, 2997
BseLI CCNNNNNNNGG 9 cut(s) 143, 407, 899, 1344, 1345, 1346, 1812, 1902, 2224
BseMI GCAATG 1 cut(s) 1856
BseMII CTCAG 6 cut(s) 27, 460, 959, 1466, 1707, 2247
BseNI ACTGG 4 cut(s) 428, 1141, 2070, 2229
BseRI GAGGAG 2 cut(s) 117, 677
BseSI GKGCMC 2 cut(s) 201, 2401
BseX3I CGGCCG 1 cut(s) 69
BseXI GCAGC 9 cut(s) 339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BseYI CCCAGC 1 cut(s) 1934
BsgI GTGCAG 4 cut(s) 1653, 1712, 2001, 2358
Bsh1236I CGCG 4 cut(s) 1174, 1575, 2035, 2836
Bsh1285I CGRYCG 1 cut(s) 72
BshFI GGCC 6 cut(s) 71, 2324, 2481, 2574, 2672, 2867
BshNI GGYRCC 2 cut(s) 198, 2898
BsiEI CGRYCG 1 cut(s) 72
BsiHKAI GWGCWC 3 cut(s) 360, 946, 2953
BsiHKCI CYCGRG 1 cut(s) 2963
BsiSI CCGG 8 cut(s) 55, 68, 347, 402, 734, 1327, 1996, 2135
BslFI GGGAC 3 cut(s) 1887, 2181, 2842
BslI CCNNNNNNNGG 9 cut(s) 143, 407, 899, 1344, 1345, 1346, 1812, 1902, 2224
BsmAI GTCTC 8 cut(s) 186, 266, 496, 1079, 1206, 1695, 2300, 2836
BsmBI CGTCTC 1 cut(s) 186
BsmFI GGGAC 3 cut(s) 1887, 2181, 2842
BsmI GAATGC 2 cut(s) 808, 832
BsnI GGCC 6 cut(s) 71, 2324, 2481, 2574, 2672, 2867
BsoBI CYCGRG 1 cut(s) 2963
Bsp1286I GDGCHC 6 cut(s) 201, 360, 946, 1080, 2401, 2953
Bsp19I CCATGG 4 cut(s) 766, 898, 2155, 2847
Bsp68I TCGCGA 1 cut(s) 1575
BspACI CCGC 6 cut(s) 652, 2575, 2596, 2707, 2794, 2836
BspANI GGCC 6 cut(s) 71, 2324, 2481, 2574, 2672, 2867
BspCNI CTCAG 6 cut(s) 26, 459, 958, 1465, 1708, 2248
BspFNI CGCG 4 cut(s) 1174, 1575, 2035, 2836
BspHI TCATGA 2 cut(s) 97, 997
BspLI GGNNCC 7 cut(s) 173, 200, 345, 1077, 2325, 2815, 2900
BspMAI CTGCAG 2 cut(s) 1550, 2350
BspMI ACCTGC 1 cut(s) 2165
BspT107I GGYRCC 2 cut(s) 198, 2898
BspTI CTTAAG 2 cut(s) 254, 2330
BsrDI GCAATG 1 cut(s) 1856
BsrFI RCCGGY 2 cut(s) 54, 67
BsrI ACTGG 4 cut(s) 428, 1141, 2070, 2229
BssAI RCCGGY 2 cut(s) 54, 67
BssECI CCNNGG 9 cut(s) 766, 898, 1080, 1502, 1869, 1870, 2155, 2560, 2847
BssNAI GTATAC 1 cut(s) 1098
BssT1I CCWWGG 4 cut(s) 766, 898, 2155, 2847
Bst1107I GTATAC 1 cut(s) 1098
Bst2UI CCWGG 8 cut(s) 483, 531, 1082, 1503, 1871, 1903, 2303, 2588
Bst4CI ACNGT 5 cut(s) 203, 232, 935, 1300, 1708
Bst6I CTCTTC 4 cut(s) 442, 571, 1818, 2288
BstAFI CTTAAG 2 cut(s) 254, 2330
BstAPI GCANNNNNTGC 2 cut(s) 2144, 2369
BstBAI YACGTR 1 cut(s) 2519
BstC8I GCNNGC 3 cut(s) 69, 2377, 2888
BstDSI CCRYGG 4 cut(s) 766, 898, 2155, 2847
BstEII GGTNACC 1 cut(s) 112
BstENI CCTNNNNNAGG 1 cut(s) 1900
BstF5I GGATG 5 cut(s) 226, 342, 478, 712, 2213
BstFNI CGCG 4 cut(s) 1174, 1575, 2035, 2836
BstH2I RGCGCY 1 cut(s) 2594
BstHHI GCGC 6 cut(s) 295, 327, 2035, 2255, 2593, 2886
BstMAI GTCTC 8 cut(s) 186, 266, 496, 1079, 1206, 1695, 2300, 2836
BstMCI CGRYCG 1 cut(s) 72
BstMWI GCNNNNNNNGC 9 cut(s) 205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
BstNI CCWGG 8 cut(s) 483, 531, 1082, 1503, 1871, 1903, 2303, 2588
BstNSI RCATGY 2 cut(s) 2627, 2890
BstPI GGTNACC 1 cut(s) 112
BstSFI CTRYAG 6 cut(s) 537, 799, 1527, 1546, 2346, 2442
BstSLI GKGCMC 2 cut(s) 201, 2401
BstUI CGCG 4 cut(s) 1174, 1575, 2035, 2836
BstV1I GCAGC 9 cut(s) 339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
BstV2I GAAGAC 3 cut(s) 2419, 2775, 2991
BstX2I RGATCY 7 cut(s) 171, 343, 485, 553, 1385, 1865, 2116
BstYI RGATCY 7 cut(s) 171, 343, 485, 553, 1385, 1865, 2116
BstZ17I GTATAC 1 cut(s) 1098
BstZI CGGCCG 1 cut(s) 69
BsuRI GGCC 6 cut(s) 71, 2324, 2481, 2574, 2672, 2867
BtgI CCRYGG 4 cut(s) 766, 898, 2155, 2847
BtrI CACGTC 1 cut(s) 941
BtsCI GGATG 5 cut(s) 226, 342, 478, 712, 2213
BtsI GCAGTG 3 cut(s) 1555, 1792, 2100
BtsIMutI CAGTG 7 cut(s) 940, 1555, 1695, 1704, 1792, 2100, 2222
BtuMI TCGCGA 1 cut(s) 1575
BveI ACCTGC 1 cut(s) 2165
Cac8I GCNNGC 3 cut(s) 69, 2377, 2888
CaiI CAGNNNCTG 5 cut(s) 488, 536, 1412, 2099, 2250
CciI TCATGA 2 cut(s) 97, 997
CfoI GCGC 6 cut(s) 295, 327, 2035, 2255, 2593, 2886
Cfr10I RCCGGY 2 cut(s) 54, 67
Cfr13I GGNCC 5 cut(s) 902, 1139, 2323, 2670, 2866
CseI GACGC 3 cut(s) 1163, 1318, 2438
Csp6I GTAC 5 cut(s) 405, 1803, 2063, 2696, 2899
CspCI CAANNNNNGTGG 2 cut(s) 38, 73
CviQI GTAC 5 cut(s) 405, 1803, 2063, 2696, 2899
DraI TTTAAA 1 cut(s) 678
DrdI GACNNNNNNGTC 1 cut(s) 2828
DseDI GACNNNNNNGTC 1 cut(s) 2828
EaeI YGGCCR 1 cut(s) 69
EagI CGGCCG 1 cut(s) 69
Eam1104I CTCTTC 4 cut(s) 442, 571, 1818, 2288
EarI CTCTTC 4 cut(s) 442, 571, 1818, 2288
EciI GGCGGA 1 cut(s) 2722
EclXI CGGCCG 1 cut(s) 69
Eco130I CCWWGG 4 cut(s) 766, 898, 2155, 2847
Eco147I AGGCCT 1 cut(s) 2481
Eco24I GRGCYC 1 cut(s) 1080
Eco32I GATATC 5 cut(s) 730, 847, 868, 1288, 2779
Eco47I GGWCC 2 cut(s) 902, 1139
Eco52I CGGCCG 1 cut(s) 69
Eco57I CTGAAG 2 cut(s) 83, 2067
Eco72I CACGTG 1 cut(s) 2519
Eco88I CYCGRG 1 cut(s) 2963
Eco91I GGTNACC 1 cut(s) 112
EcoNI CCTNNNNNAGG 1 cut(s) 1900
EcoO109I RGGNCCY 1 cut(s) 2323
EcoO65I GGTNACC 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 1048
EcoRII CCWGG 8 cut(s) 481, 529, 1080, 1501, 1869, 1901, 2301, 2586
EcoRV GATATC 5 cut(s) 730, 847, 868, 1288, 2779
EcoT14I CCWWGG 4 cut(s) 766, 898, 2155, 2847
EcoT38I GRGCYC 1 cut(s) 1080
ErhI CCWWGG 4 cut(s) 766, 898, 2155, 2847
Esp3I CGTCTC 1 cut(s) 186
FalI AAGNNNNNCTT 4 cut(s) 2324, 2356, 2489, 2521
FaqI GGGAC 3 cut(s) 1887, 2181, 2842
FauI CCCGC 1 cut(s) 2829
FauNDI CATATG 1 cut(s) 352
FbaI TGATCA 2 cut(s) 748, 922
FblI GTMKAC 3 cut(s) 963, 1097, 1592
FokI GGATG 5 cut(s) 233, 349, 465, 719, 2200
FriOI GRGCYC 1 cut(s) 1080
FspAI RTGCGCAY 1 cut(s) 294
FspBI CTAG 8 cut(s) 557, 659, 744, 1623, 1800, 2202, 2477, 2934
FspI TGCGCA 1 cut(s) 294
GlaI GCGC 6 cut(s) 294, 326, 2034, 2254, 2592, 2885
GsaI CCCAGC 1 cut(s) 1938
GsuI CTGGAG 5 cut(s) 1846, 2109, 2246, 2324, 2912
HaeII RGCGCY 1 cut(s) 2594
HaeIII GGCC 6 cut(s) 71, 2324, 2481, 2574, 2672, 2867
HapII CCGG 8 cut(s) 55, 68, 347, 402, 734, 1327, 1996, 2135
HgaI GACGC 3 cut(s) 1163, 1318, 2438
HhaI GCGC 6 cut(s) 295, 327, 2035, 2255, 2593, 2886
Hin6I GCGC 6 cut(s) 293, 325, 2033, 2253, 2591, 2884
HinP1I GCGC 6 cut(s) 293, 325, 2033, 2253, 2591, 2884
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HindIII AAGCTT 1 cut(s) 645
HpaII CCGG 8 cut(s) 55, 68, 347, 402, 734, 1327, 1996, 2135
HphI GGTGA 9 cut(s) 106, 248, 406, 417, 1361, 1487, 1522, 1599, 2951
HpyCH4III ACNGT 5 cut(s) 203, 232, 935, 1300, 1708
HpyCH4IV ACGT 4 cut(s) 267, 940, 1437, 2518
HpyF10VI GCNNNNNNNGC 9 cut(s) 205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
HpySE526I ACGT 4 cut(s) 267, 940, 1437, 2518
HspAI GCGC 6 cut(s) 293, 325, 2033, 2253, 2591, 2884
KpnI GGTACC 1 cut(s) 2902
KroI GCCGGC 1 cut(s) 67
KroNI GCCGGC 1 cut(s) 69
Ksp22I TGATCA 2 cut(s) 748, 922
LmnI GCTCC 8 cut(s) 664, 1075, 1492, 1846, 2090, 2598, 2813, 2948
Lsp1109I GCAGC 9 cut(s) 339, 2017, 2159, 2237, 2332, 2356, 2359, 2372, 2521
LweI GCATC 6 cut(s) 807, 939, 1037, 1342, 2147, 2295
MaeI CTAG 8 cut(s) 557, 659, 744, 1623, 1800, 2202, 2477, 2934
MaeII ACGT 4 cut(s) 267, 940, 1437, 2518
MaeIII GTNAC 4 cut(s) 112, 1510, 2095, 2437
MflI RGATCY 7 cut(s) 171, 343, 485, 553, 1385, 1865, 2116
MhlI GDGCHC 6 cut(s) 201, 360, 946, 1080, 2401, 2953
MlyI GAGTC 7 cut(s) 463, 535, 620, 1550, 1721, 1989, 2864
MmeI TCCRAC 3 cut(s) 241, 321, 1824
MroNI GCCGGC 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 1827
MseI TTAA 9 cut(s) 27, 162, 255, 671, 677, 989, 1958, 2331, 2976
MslI CAYNNNNRTG 1 cut(s) 2993
MspA1I CMGCKG 2 cut(s) 2087, 2534
MspCI CTTAAG 2 cut(s) 254, 2330
MspI CCGG 8 cut(s) 55, 68, 347, 402, 734, 1327, 1996, 2135
Mva1269I GAATGC 2 cut(s) 808, 832
MvaI CCWGG 8 cut(s) 483, 531, 1082, 1503, 1871, 1903, 2303, 2588
MvnI CGCG 4 cut(s) 1174, 1575, 2035, 2836
MwoI GCNNNNNNNGC 9 cut(s) 205, 1581, 2078, 2144, 2366, 2369, 2396, 2571, 2881
NaeI GCCGGC 1 cut(s) 69
NciI CCSGG 4 cut(s) 402, 734, 1328, 1997
NcoI CCATGG 4 cut(s) 766, 898, 2155, 2847
NdeI CATATG 1 cut(s) 352
NgoMIV GCCGGC 1 cut(s) 67
NlaIV GGNNCC 7 cut(s) 173, 200, 345, 1077, 2325, 2815, 2900
NmuCI GTSAC 3 cut(s) 112, 1510, 2095
NruI TCGCGA 1 cut(s) 1575
NsbI TGCGCA 1 cut(s) 294
NspI RCATGY 2 cut(s) 2627, 2890
PaeI GCATGC 1 cut(s) 2890
PaeR7I CTCGAG 1 cut(s) 2963
PagI TCATGA 2 cut(s) 97, 997
PasI CCCWGGG 1 cut(s) 1870
PceI AGGCCT 1 cut(s) 2481
PciI ACATGT 1 cut(s) 2623
PcsI WCGNNNNNNNCGW 3 cut(s) 184, 2515, 2970
PctI GAATGC 2 cut(s) 808, 832
PdiI GCCGGC 1 cut(s) 69
PdmI GAANNNNTTC 1 cut(s) 1827
PfeI GAWTC 9 cut(s) 94, 1022, 1280, 1409, 1619, 1682, 2680, 2750, 2759
PflMI CCANNNNNTGG 1 cut(s) 1812
PfoI TCCNGGA 5 cut(s) 481, 732, 1326, 1901, 1995
PleI GAGTC 7 cut(s) 462, 534, 619, 1549, 1720, 1988, 2863
PmaCI CACGTG 1 cut(s) 2519
PmlI CACGTG 1 cut(s) 2519
PpsI GAGTC 7 cut(s) 462, 534, 619, 1549, 1720, 1988, 2863
Ppu21I YACGTR 1 cut(s) 2519
PscI ACATGT 1 cut(s) 2623
PshBI ATTAAT 2 cut(s) 27, 989
Psp1406I AACGTT 2 cut(s) 267, 1437
Psp6I CCWGG 8 cut(s) 481, 529, 1080, 1501, 1869, 1901, 2301, 2586
PspCI CACGTG 1 cut(s) 2519
PspEI GGTNACC 1 cut(s) 112
PspFI CCCAGC 1 cut(s) 1934
PspGI CCWGG 8 cut(s) 481, 529, 1080, 1501, 1869, 1901, 2301, 2586
PspN4I GGNNCC 7 cut(s) 173, 200, 345, 1077, 2325, 2815, 2900
PspPI GGNCC 5 cut(s) 902, 1139, 2323, 2670, 2866
PspXI VCTCGAGB 1 cut(s) 2963
PsrI GAACNNNNNNTAC 2 cut(s) 1632, 1664
PstI CTGCAG 2 cut(s) 1550, 2350
PstNI CAGNNNCTG 5 cut(s) 488, 536, 1412, 2099, 2250
PsuI RGATCY 7 cut(s) 171, 343, 485, 553, 1385, 1865, 2116
PvuII CAGCTG 2 cut(s) 2087, 2534
RruI TCGCGA 1 cut(s) 1575
RsaI GTAC 5 cut(s) 406, 1804, 2064, 2697, 2900
RsaNI GTAC 5 cut(s) 405, 1803, 2063, 2696, 2899
RseI CAYNNNNRTG 1 cut(s) 2993
SaqAI TTAA 9 cut(s) 27, 162, 255, 671, 677, 989, 1958, 2331, 2976
Sau96I GGNCC 5 cut(s) 902, 1139, 2323, 2670, 2866
SchI GAGTC 7 cut(s) 463, 535, 620, 1550, 1721, 1989, 2864
SduI GDGCHC 6 cut(s) 201, 360, 946, 1080, 2401, 2953
SfaNI GCATC 6 cut(s) 807, 939, 1037, 1342, 2147, 2295
SfcI CTRYAG 6 cut(s) 537, 799, 1527, 1546, 2346, 2442
Sfr274I CTCGAG 1 cut(s) 2963
SinI GGWCC 2 cut(s) 902, 1139
SlaI CTCGAG 1 cut(s) 2963
SmiMI CAYNNNNRTG 1 cut(s) 2993
SmlI CTYRAG 5 cut(s) 254, 1179, 2330, 2783, 2963
SmoI CTYRAG 5 cut(s) 254, 1179, 2330, 2783, 2963
SpeI ACTAGT 1 cut(s) 2933
SphI GCATGC 1 cut(s) 2890
SseBI AGGCCT 1 cut(s) 2481
SsiI CCGC 6 cut(s) 652, 2575, 2596, 2707, 2794, 2836
SspI AATATT 1 cut(s) 25
SspMI CTAG 8 cut(s) 557, 659, 744, 1623, 1800, 2202, 2477, 2934
StuI AGGCCT 1 cut(s) 2481
StyI CCWWGG 4 cut(s) 766, 898, 2155, 2847
TaaI ACNGT 5 cut(s) 203, 232, 935, 1300, 1708
TaiI ACGT 4 cut(s) 270, 943, 1440, 2521
TaqI TCGA 8 cut(s) 464, 1733, 1971, 2262, 2291, 2808, 2853, 2964
TatI WGTACW 2 cut(s) 2062, 2695
TauI GCSGC 2 cut(s) 655, 2577
TfiI GAWTC 9 cut(s) 94, 1022, 1280, 1409, 1619, 1682, 2680, 2750, 2759
Tru1I TTAA 9 cut(s) 27, 162, 255, 671, 677, 989, 1958, 2331, 2976
Tru9I TTAA 9 cut(s) 27, 162, 255, 671, 677, 989, 1958, 2331, 2976
TscAI CASTG 7 cut(s) 940, 1555, 1695, 1711, 1792, 2100, 2229
TseFI GTSAC 3 cut(s) 112, 1510, 2095
TseI GCWGC 9 cut(s) 327, 2030, 2147, 2250, 2345, 2360, 2369, 2372, 2534
Tsp45I GTSAC 3 cut(s) 112, 1510, 2095
TspGWI ACGGA 2 cut(s) 176, 1466
TspRI CASTG 7 cut(s) 940, 1555, 1695, 1711, 1792, 2100, 2229
Van91I CCANNNNNTGG 1 cut(s) 1812
Vha464I CTTAAG 2 cut(s) 254, 2330
VpaK11BI GGWCC 2 cut(s) 902, 1139
VspI ATTAAT 2 cut(s) 27, 989
XagI CCTNNNNNAGG 1 cut(s) 1900
XapI RAATTY 8 cut(s) 313, 698, 1001, 1048, 1332, 1562, 1668, 1990
XceI RCATGY 2 cut(s) 2627, 2890
XhoI CTCGAG 1 cut(s) 2963
XmiI GTMKAC 3 cut(s) 963, 1097, 1592
XmnI GAANNNNTTC 1 cut(s) 1827
XspI CTAG 8 cut(s) 557, 659, 744, 1623, 1800, 2202, 2477, 2934
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.