Prupe.1G272700_v2.0.a1

Ran guanine nucleotide release

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014591
Physical Location & Seq
Reverse (-)
27921232 .. 27924019
2788 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G272700.1

Sequence Viewer

Length: 609 bp
ATGTCCCAAGACATCTACTCTGAGCGCCCCTTGTTTGGCGGTGCCATTACTAGCACCTTCCCTCTTAGGTTCCAGGATGTGAGCGACATTCGGCAAGTTCCTGATCACCAGGAGGCATTTGTGGACCCTGCCCGGGACGAAAGCTTGATCTTTGAGCTCTTGGAATTGAAGCATGAAGTTGGCGATGATGGAAGTGCTACCTGGTTTCTCCAAGACCTCGCCACTGAACAAGATGCTGACGGCAGCATGGTGATTGAACAGTCAGGAGTAGTTGAGGCCCCTGGATTATGTTATAGAAACACACCTGCTGTTGTTACAACTGCTGTTGGCCAAATGTCCATTTCCAAGGGGCGGCAGGGAAGGGAGGCACAAAATATTGTGAGGGTCTATGTGGCAAATCTGCGACTTAAGGAAGTTAATACTGATGTGCTAGTTACTGCATATGAACCCGTTCATATAAATCCTTTGAGCGAAAGTGCAAGCACAGTGGGGGCTGGTCTTGCTGTTCCTGCAGTACAATCCGGATATATGCCAGTGGCCGAGGTCTTTAAACTCGCTGTCTCTAGCTTCAAAGTCAATGACTGGAATCTTTTTGGCTCTGTGGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mog1

Protein Analysis

203

Amino Acids

21.93

Weight (kDa)

4.5

Isoelectric Point (pI)

48.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014591)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G69680
fragaria_vesca FvH4_2g13310 FvH4_4g31510
malus_domestica MD13G1073400.v1.1 MD16G1074700.v1.1
prunus_persica Prupe.1G272700_v2.0.a1
pyrus_communis pycom13g06570
rosa_chinensis RchiOBHm_Chr4g0440001
rosa_laevigata RLG00000006216
rosa_multiflora Rmu_sc0006000.1_g000008
rosa_roxburghii Rroxscaffold_5G00380950
rosa_rugosa Rorug04G0323100 Rorug04G0323200
rosa_samantha Rh4BG386500 Rh4CG401000 Rh4DG380800
rosa_wichuraiana Rw4G032010

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 313
Acc36I ACCTGC 1 cut(s) 313
AccB1I GGYRCC 1 cut(s) 41
AccIII TCCGGA 1 cut(s) 521
AciI CCGC 2 cut(s) 39, 352
AcoI YGGCCR 2 cut(s) 328, 537
AfaI GTAC 1 cut(s) 516
AfiI CCNNNNNNNGG 3 cut(s) 35, 133, 351
AflII CTTAAG 1 cut(s) 407
AgsI TTSAA 3 cut(s) 169, 257, 571
AjnI CCWGG 4 cut(s) 72, 108, 200, 280
AluBI AGCT 3 cut(s) 144, 157, 567
AluI AGCT 3 cut(s) 144, 157, 567
Alw21I GWGCWC 1 cut(s) 159
Alw26I GTCTC 1 cut(s) 565
Ama87I CYCGRG 1 cut(s) 132
Aor13HI TCCGGA 1 cut(s) 521
AoxI GGCC 4 cut(s) 276, 328, 537, 603
ApeKI GCWGC 1 cut(s) 243
Asp700I GAANNNNTTC 1 cut(s) 450
AspLEI GCGC 1 cut(s) 27
AspS9I GGNCC 2 cut(s) 124, 277
AsuC2I CCSGG 2 cut(s) 133, 134
AsuHPI GGTGA 2 cut(s) 98, 262
AvaI CYCGRG 1 cut(s) 132
AvaII GGWCC 1 cut(s) 124
BalI TGGCCA 1 cut(s) 330
BanI GGYRCC 1 cut(s) 41
BanII GRGCYC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 159
BbvI GCAGC 1 cut(s) 255
BccI CCATC 1 cut(s) 182
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 4 cut(s) 74, 110, 202, 282
BclI TGATCA 1 cut(s) 103
BcnI CCSGG 2 cut(s) 133, 134
BcoDI GTCTC 1 cut(s) 565
BfaI CTAG 3 cut(s) 51, 431, 564
BfmI CTRYAG 1 cut(s) 510
BfoI RGCGCY 1 cut(s) 28
BfrI CTTAAG 1 cut(s) 407
BfuAI ACCTGC 1 cut(s) 313
BisI GCNGC 2 cut(s) 244, 353
BlsI GCNGC 2 cut(s) 245, 354
Bme1390I CCNGG 6 cut(s) 74, 110, 133, 134, 202, 282
Bme18I GGWCC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 132
BmgT120I GGNCC 2 cut(s) 124, 277
BmiI GGNNCC 4 cut(s) 43, 71, 126, 279
BmrFI CCNGG 6 cut(s) 74, 110, 133, 134, 202, 282
BmsI GCATC 1 cut(s) 223
BpuMI CCSGG 2 cut(s) 133, 134
BsaJI CCNNGG 4 cut(s) 132, 280, 345, 540
BsaWI WCCGGW 1 cut(s) 521
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 133, 351
Bse1I ACTGG 2 cut(s) 533, 587
BseAI TCCGGA 1 cut(s) 521
BseBI CCWGG 4 cut(s) 74, 110, 202, 282
BseDI CCNNGG 4 cut(s) 132, 280, 345, 540
BseGI GGATG 1 cut(s) 82
BseLI CCNNNNNNNGG 3 cut(s) 35, 133, 351
BseMII CTCAG 1 cut(s) 12
BseNI ACTGG 2 cut(s) 533, 587
BseXI GCAGC 1 cut(s) 255
BshFI GGCC 4 cut(s) 278, 330, 539, 605
BshNI GGYRCC 1 cut(s) 41
BsiHKAI GWGCWC 1 cut(s) 159
BsiHKCI CYCGRG 1 cut(s) 132
BsiSI CCGG 2 cut(s) 133, 522
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 3 cut(s) 35, 133, 351
BsmAI GTCTC 1 cut(s) 565
BsmFI GGGAC 1 cut(s) 149
BsnI GGCC 4 cut(s) 278, 330, 539, 605
BsoBI CYCGRG 1 cut(s) 132
Bsp1286I GDGCHC 1 cut(s) 159
Bsp13I TCCGGA 1 cut(s) 521
Bsp143I GATC 2 cut(s) 103, 147
BspACI CCGC 2 cut(s) 39, 352
BspANI GGCC 4 cut(s) 278, 330, 539, 605
BspCNI CTCAG 1 cut(s) 13
BspEI TCCGGA 1 cut(s) 521
BspLI GGNNCC 4 cut(s) 43, 71, 126, 279
BspMAI CTGCAG 1 cut(s) 514
BspMI ACCTGC 1 cut(s) 313
BspT107I GGYRCC 1 cut(s) 41
BspTI CTTAAG 1 cut(s) 407
BsrI ACTGG 2 cut(s) 533, 587
BssECI CCNNGG 4 cut(s) 132, 280, 345, 540
BssMI GATC 2 cut(s) 103, 147
BssT1I CCWWGG 1 cut(s) 345
Bst2UI CCWGG 4 cut(s) 74, 110, 202, 282
Bst4CI ACNGT 2 cut(s) 261, 487
BstAFI CTTAAG 1 cut(s) 407
BstC8I GCNNGC 1 cut(s) 481
BstDEI CTNAG 2 cut(s) 21, 65
BstF5I GGATG 1 cut(s) 82
BstH2I RGCGCY 1 cut(s) 28
BstHHI GCGC 1 cut(s) 27
BstKTI GATC 2 cut(s) 106, 150
BstMAI GTCTC 1 cut(s) 565
BstMBI GATC 2 cut(s) 103, 147
BstMWI GCNNNNNNNGC 2 cut(s) 500, 509
BstNI CCWGG 4 cut(s) 74, 110, 202, 282
BstSCI CCNGG 6 cut(s) 72, 108, 131, 132, 200, 280
BstSFI CTRYAG 1 cut(s) 510
BstV1I GCAGC 1 cut(s) 255
BsuRI GGCC 4 cut(s) 278, 330, 539, 605
BtgZI GCGATG 1 cut(s) 198
BtsCI GGATG 1 cut(s) 82
BtsIMutI CAGTG 3 cut(s) 222, 492, 540
BveI ACCTGC 1 cut(s) 313
Cac8I GCNNGC 1 cut(s) 481
CfoI GCGC 1 cut(s) 27
Cfr13I GGNCC 2 cut(s) 124, 277
Cfr9I CCCGGG 1 cut(s) 132
CsiI ACCWGGT 1 cut(s) 200
Csp6I GTAC 1 cut(s) 515
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviAII CATG 2 cut(s) 173, 247
CviJI RGCY 9 cut(s) 144, 157, 278, 330, 494, 539, 567, 597, 605
CviKI_1 RGCY 9 cut(s) 144, 157, 278, 330, 494, 539, 567, 597, 605
CviQI GTAC 1 cut(s) 515
DdeI CTNAG 2 cut(s) 21, 65
DpnI GATC 2 cut(s) 105, 149
DpnII GATC 2 cut(s) 103, 147
DraI TTTAAA 1 cut(s) 550
EaeI YGGCCR 2 cut(s) 328, 537
Ecl136II GAGCTC 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 345
Eco24I GRGCYC 1 cut(s) 159
Eco47I GGWCC 1 cut(s) 124
Eco53kI GAGCTC 1 cut(s) 157
Eco88I CYCGRG 1 cut(s) 132
EcoICRI GAGCTC 1 cut(s) 157
EcoO109I RGGNCCY 1 cut(s) 277
EcoRII CCWGG 4 cut(s) 72, 108, 200, 280
EcoT14I CCWWGG 1 cut(s) 345
EcoT38I GRGCYC 1 cut(s) 159
ErhI CCWWGG 1 cut(s) 345
FaeI CATG 2 cut(s) 176, 250
FaqI GGGAC 1 cut(s) 149
FatI CATG 2 cut(s) 172, 246
FauNDI CATATG 1 cut(s) 442
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 2 cut(s) 244, 353
FokI GGATG 1 cut(s) 89
FriOI GRGCYC 1 cut(s) 159
Fsp4HI GCNGC 2 cut(s) 244, 353
FspBI CTAG 3 cut(s) 51, 431, 564
GlaI GCGC 1 cut(s) 26
GluI GCNGC 2 cut(s) 244, 353
HaeII RGCGCY 1 cut(s) 28
HaeIII GGCC 4 cut(s) 278, 330, 539, 605
HapII CCGG 2 cut(s) 133, 522
HhaI GCGC 1 cut(s) 27
Hin1II CATG 2 cut(s) 176, 250
Hin6I GCGC 1 cut(s) 25
HinP1I GCGC 1 cut(s) 25
HindIII AAGCTT 1 cut(s) 142
HinfI GANTC 1 cut(s) 586
HpaII CCGG 2 cut(s) 133, 522
HphI GGTGA 2 cut(s) 98, 262
Hpy166II GTNNAC 1 cut(s) 124
Hpy188I TCNGA 1 cut(s) 22
Hpy188III TCNNGA 3 cut(s) 101, 264, 522
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 2 cut(s) 67, 354
HpyCH4III ACNGT 2 cut(s) 261, 487
HpyCH4V TGCA 3 cut(s) 440, 479, 512
HpyF10VI GCNNNNNNNGC 2 cut(s) 500, 509
HpyF3I CTNAG 2 cut(s) 21, 65
Hsp92II CATG 2 cut(s) 176, 250
HspAI GCGC 1 cut(s) 25
Kpn2I TCCGGA 1 cut(s) 521
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 2 cut(s) 103, 147
Lsp1109I GCAGC 1 cut(s) 255
LweI GCATC 1 cut(s) 223
MabI ACCWGGT 1 cut(s) 200
MaeI CTAG 3 cut(s) 51, 431, 564
MaeIII GTNAC 2 cut(s) 313, 433
MalI GATC 2 cut(s) 105, 149
MboI GATC 2 cut(s) 103, 147
MhlI GDGCHC 1 cut(s) 159
MlsI TGGCCA 1 cut(s) 330
MluCI AATT 1 cut(s) 164
MluNI TGGCCA 1 cut(s) 330
MnlI CCTC 7 cut(s) 72, 106, 227, 268, 358, 375, 535
Mox20I TGGCCA 1 cut(s) 330
MroI TCCGGA 1 cut(s) 521
MroXI GAANNNNTTC 1 cut(s) 450
MscI TGGCCA 1 cut(s) 330
MseI TTAA 3 cut(s) 408, 417, 549
Msp20I TGGCCA 1 cut(s) 330
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 2 cut(s) 133, 522
MspR9I CCNGG 6 cut(s) 74, 110, 133, 134, 202, 282
MvaI CCWGG 4 cut(s) 74, 110, 202, 282
MwoI GCNNNNNNNGC 2 cut(s) 500, 509
NciI CCSGG 2 cut(s) 133, 134
NdeI CATATG 1 cut(s) 442
NdeII GATC 2 cut(s) 103, 147
NlaIII CATG 2 cut(s) 176, 250
NlaIV GGNNCC 4 cut(s) 43, 71, 126, 279
NmeAIII GCCGAG 1 cut(s) 565
PaqCI CACCTGC 1 cut(s) 313
PdmI GAANNNNTTC 1 cut(s) 450
PfeI GAWTC 1 cut(s) 586
PfoI TCCNGGA 1 cut(s) 72
PkrI GCNGC 2 cut(s) 245, 354
Psp124BI GAGCTC 1 cut(s) 159
Psp6I CCWGG 4 cut(s) 72, 108, 200, 280
PspGI CCWGG 4 cut(s) 72, 108, 200, 280
PspN4I GGNNCC 4 cut(s) 43, 71, 126, 279
PspPI GGNCC 2 cut(s) 124, 277
PstI CTGCAG 1 cut(s) 514
RsaI GTAC 1 cut(s) 516
RsaNI GTAC 1 cut(s) 515
SacI GAGCTC 1 cut(s) 159
SaqAI TTAA 3 cut(s) 408, 417, 549
SatI GCNGC 2 cut(s) 244, 353
Sau3AI GATC 2 cut(s) 103, 147
Sau96I GGNCC 2 cut(s) 124, 277
ScrFI CCNGG 6 cut(s) 74, 110, 133, 134, 202, 282
SduI GDGCHC 1 cut(s) 159
SetI ASST 9 cut(s) 59, 71, 146, 159, 203, 219, 307, 546, 569
SexAI ACCWGGT 1 cut(s) 200
SfaNI GCATC 1 cut(s) 223
SfcI CTRYAG 1 cut(s) 510
SinI GGWCC 1 cut(s) 124
SmaI CCCGGG 1 cut(s) 134
SmlI CTYRAG 1 cut(s) 407
SmoI CTYRAG 1 cut(s) 407
Sse9I AATT 1 cut(s) 164
SsiI CCGC 2 cut(s) 39, 352
SspI AATATT 1 cut(s) 376
SspMI CTAG 3 cut(s) 51, 431, 564
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 6 cut(s) 72, 108, 131, 132, 200, 280
StyI CCWWGG 1 cut(s) 345
TaaI ACNGT 2 cut(s) 261, 487
TasI AATT 1 cut(s) 164
TatI WGTACW 1 cut(s) 514
TauI GCSGC 1 cut(s) 355
TfiI GAWTC 1 cut(s) 586
Tru1I TTAA 3 cut(s) 408, 417, 549
Tru9I TTAA 3 cut(s) 408, 417, 549
TscAI CASTG 3 cut(s) 229, 492, 540
TseI GCWGC 1 cut(s) 243
TspDTI ATGAA 3 cut(s) 189, 443, 459
TspMI CCCGGG 1 cut(s) 132
TspRI CASTG 3 cut(s) 229, 492, 540
Vha464I CTTAAG 1 cut(s) 407
VpaK11BI GGWCC 1 cut(s) 124
XmaI CCCGGG 1 cut(s) 132
XmnI GAANNNNTTC 1 cut(s) 450
XspI CTAG 3 cut(s) 51, 431, 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.