AT1G75640
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0011850
Physical Location & Seq
Reverse (-)
28403371 .. 28407182
3812 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G75640.1

Sequence Viewer

Length: 3423 bp
ATGGCCGCAACGGTCATTTTCTTCCTTCACTTCGCCGCAATCTTCTTCTCCAGATTCCACCACACCTCCGCCATCTCATCAGAGACTCAAGCACTCACATCTTTCAAACTCTCTCTCCACGACCCTCTAGGAGCTCTCGAGTCCTGGAATCAATCATCTCCATCAGCTCCATGCGACTGGCACGGCGTTTCTTGCTTCTCCGGCCGTGTCCGTGAGCTTCGTCTTCCTCGTCTCCACCTCACCGGCCACCTCAGTCCTCGACTCGGTGAGTTGACTCAGCTCCGTAAACTAAGTCTTCACACCAACGACATAAACGGCGCCGTTCCTTCGTCTCTCTCTCGTTGTGTCTTCCTTAGAGCTCTTTATCTTCACTACAACTCCTTCTCCGGCGATTTTCCACCGGAGATACTGAATCTACGAAACCTCCAGGTCCTCAACGCTGCTCACAACTCACTCACCGGAAATCTATCCGACGTCACAGTCTCGAAGAGCCTTCGTTACGTCGATTTGTCTTCCAATGCAATATCCGGTAAGATTCCGGCGAATTTCTCAGCGGATTCATCTCTCCAGCTCATCAACCTCTCGTTCAACCACTTCTCCGGTGAGATCCCGGCTACATTGGGACAACTACAAGACCTCGAGTATCTCTGGCTAGACTCAAACCAATTACAAGGCACAATACCATCCGCATTAGCCAACTGTTCATCGCTTATACACTTCAGCGTAACCGGTAATCACCTCACCGGTTTAATTCCGGTTACTTTAGGCACGATTCGAAGCCTGCAGGTGATTTCATTATCGGAGAATTCATTTACCGGTACAGTTCCGGTTAGTCTTCTATGTGGTTATTCAGGTTACAATTCCTCCATGCGAATCATTCAATTAGGAGTTAATAACTTCACGGGAATAGCTAAGCCGTCAAATGCAGCTTGCGTGAACCCTAATTTGGAGATTCTCGACATTCACGAGAATCGCATTAATGGCGATTTTCCCGCGTGGTTGACTGATTTGACCTCTTTAGTGGTTTTGGATATTTCTGGAAACGGTTTCTCCGGTGGTGTTACGGCTAAAGTTGGGAACTTGATGGCGCTTCAGGAGCTGAGAGTAGCTAACAATTCACTTGTTGGAGAAATTCCGACGAGTATCCGTAATTGCAAATCGTTAAGAGTCGTTGATTTCGAAGGAAACAAGTTCTCGGGTCAGATTCCGGGTTTTCTAAGTCAGTTACGGAGCCTGACAACGATATCTCTTGGAAGAAACGGGTTCTCGGGTCGGATTCCATCGGATCTTCTCAGCTTGTACGGACTCGAGACATTGAATCTCAATGAAAATCATCTCACCGGAGCAATACCGTCGGAGATAACAAAGCTAGCTAATCTTACCATCCTTAATCTCAGTTTCAACAGATTCTCCGGCGAAGTTCCGTCCAATGTGGGTGATCTGAAAAGCTTGAGTGTTCTCAACATAAGTGGATGCGGGTTAACGGGTCGGATACCGGTTAGCATTAGCGGATTAATGAAGCTTCAGGTTTTGGATATAAGTAAACAGAGAATCTCTGGTCAGTTACCAGTCGAACTATTTGGTTTACCGGATCTTCAAGTGGTTGCTCTTGGAAACAACTTGCTCGGCGGCGTCGTACCGGAAGGTTTCAGCAGCTTGGTTAGTCTTAAGTACTTAAATCTCAGTTCCAACTTATTCTCCGGACATATCCCAAAGAACTATGGATTTCTCAAGTCATTACAAGTGCTTTCGTTGTCTCACAATCGAATATCCGGTACAATCCCGCCGGAGATTGGGAATTGTTCCAGTCTTGAGGTTCTTGAGCTTGGTTCTAATAGTTTAAAGGGTCACATTCCGGTTTACGTTTCCAAGTTGTCTCTTTTGAAGAAGCTTGATTTGAGTCACAACAGTTTAACAGGGAGTATTCCGGATCAGATTTCTAAGGATTCTTCTCTAGAATCTCTCCTGCTTAATTCGAATTCTCTATCGGGTCGAATACCGGAATCTTTATCAAGATTGACGAATCTAACCGCGTTGGATCTTTCGTCGAACAGATTGAATTCCACTATACCATCAAGTCTCTCTCGGCTTCGTTTCTTGAACTATTTCAACTTATCAAGAAACAGTTTGGAAGGGGAGATTCCAGAAGCTCTAGCTGCGCGTTTCACTAACCCGACCGTCTTTGTCAAGAACCCGGGACTCTGCGGTAAACCGCTTGGTATAGAATGTCCAAACGTTCGAAGGAGAAGAAGAAGAAAGCTAATTCTACTAGTGACACTAGCAGTGGCTGGAGCTTTGTTGCTGTTACTCTGTTGTTGTGGTTATGTGTTCAGTTTATGGAAATGGCGGAACAAACTAAGATTGGGCTTGAGTCGGGACAAGAAAGGGACCCCCTCACGTACATCTAGAGCGAGTTCTGGTGGGACAAGAGGAGAAGACAACAATGGTGGACCTAAACTTGTGATGTTCAACAACAAGATCACGTTAGCTGAAACCTTAGAAGCCACAAGACAATTTGACGAAGAGAACGTATTGAGCAGAGGAAGGTATGGGTTGGTCTTCAAGGCGACGTTTAGAGATGGGATGGTTCTATCGGTTCGTAGACTAATGGATGGTGCTTCGATAACCGATGCAACGTTCCGTAACCAAGCTGAGGCTTTAGGTAGAGTGAAGCACAAGAACATCACGGTCTTGAGAGGTTATTACTGCGGACCACCTGATCTAAGACTTCTTGTTTACGACTACATGCCCAACGGAAACCTCGCTACGCTTTTGCAAGAAGCCTCTCACCAAGACGGACATGTCTTGAACTGGCCAATGCGTCATCTCATTGCTCTTGGAATCGCTAGAGGACTGTCCTTCTTGCATTCTTTATCAATCATTCACGGCGATCTTAAACCGCAAAACGTACTCTTCGACGCTGACTTTGAAGCGCATTTGTCAGAATTCGGGTTAGATAGATTGACAGCGTTGACTCCAGCTGAAGAACCATCCACTTCATCCACTCCCGTCGGGTCTTTAGGCTACATTGCACCGGAAGCGGGTTTAACGGGTGAAACAAGTAAAGAGAGCGACGTGTACAGCTTCGGGATCGTGTTGTTAGAGATCTTAACGGGGAAAAAGGCAGTGATGTTTACAGAGGATGAAGATATAGTGAAATGGGTGAAGAGACAGTTACAAAAAGGTCAGATCGTTGAGTTGCTTGAACCGGGTTTGTTGGAGCTTGACCCGGAAAGTTCGGAGTGGGAAGAGTTCTTGTTAGGGATCAAAGTTGGGTTGTTGTGTACTGGAGGAGACGTCGTTGATCGTCCGTCTATGGCTGATGTTGTTTTCATGCTCGAAGGGTGTAGAGTCGGTCCGGCGATTTCCTTGTCCGCCGATCCTACTTCACCTACTTCTCCCGCCGCAACCGCCGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0007275 GO:0008150 GO:0009791 GO:0016020 GO:0032501 GO:0032502 GO:0044464 GO:0048731 GO:0048856 GO:0071944 GO:0090696 GO:0099402
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1140

Amino Acids

123.53

Weight (kDa)

8.04

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 26 - 65 1.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 380 - 489 1.7e-08 Leucine-rich repeat region
LRR_14 PF23598 497 - 585 7.3e-06 Leucine-rich repeat region
LRR_8 PF13855 507 - 565 7e-09 Leucine rich repeat
LRR_14 PF23598 573 - 706 1.7e-08 Leucine-rich repeat region
LRR_4 PF12799 578 - 613 2.8e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 579 - 638 1.5e-07 Leucine rich repeat
Pkinase PF00069 841 - 1063 1e-29 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 842 - 1059 3.4e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011850)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G75640
fragaria_vesca FvH4_2g39080
malus_domestica MD08G1017600.v1.1 MD08G1017800.v1.1 MD15G1016500.v1.1
prunus_persica Prupe.1G370300_v2.0.a1
pyrus_communis pycom08g01540 pycom15g01450 pycom15g01460
rosa_chinensis RchiOBHm_Chr6g0302191
rosa_laevigata RLG00000011188
rosa_multiflora Rmu_co8058424.1_g000001
rosa_roxburghii Rroxscaffold_7G00166010
rosa_rugosa Rorug06G0313000
rosa_samantha Rh6AG425500 Rh6BG477000 Rh6CG438300 Rh6DG425300
rosa_wichuraiana Rw6G036850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 775
AasI GACNNNNNNGTC 2 cut(s) 479, 2801
AatII GACGTC 2 cut(s) 477, 3300
Acc36I ACCTGC 1 cut(s) 775
AccB1I GGYRCC 1 cut(s) 317
AccI GTMKAC 1 cut(s) 2602
AccII CGCG 3 cut(s) 995, 2033, 2161
AccIII TCCGGA 2 cut(s) 1700, 1927
AclI AACGTT 2 cut(s) 2235, 2636
AclWI GGATC 8 cut(s) 601, 1293, 1599, 1938, 2046, 3098, 3272, 3374
AcoI YGGCCR 4 cut(s) 3, 202, 244, 2813
AcsI RAATTY 6 cut(s) 544, 805, 1131, 1978, 2059, 2945
AcuI CTGAAG 4 cut(s) 703, 1076, 1508, 3003
AcyI GRCGYC 4 cut(s) 318, 474, 1632, 3297
AfaI GTAC 9 cut(s) 820, 1301, 1638, 1673, 1777, 2401, 2910, 3080, 3286
AfiI CCNNNNNNNGG 5 cut(s) 263, 946, 1793, 2653, 3041
AflII CTTAAG 1 cut(s) 1667
AflIII ACRYGT 2 cut(s) 2800, 3075
AgeI ACCGGT 4 cut(s) 728, 743, 815, 1495
AhlI ACTAGT 1 cut(s) 2269
AjiI CACGTC 1 cut(s) 3076
AjnI CCWGG 2 cut(s) 143, 426
AjuI GAANNNNNNNTTGG 2 cut(s) 929, 961
Alw21I GWGCWC 2 cut(s) 136, 361
AlwI GGATC 8 cut(s) 601, 1293, 1599, 1938, 2046, 3098, 3272, 3374
AlwNI CAGNNNCTG 2 cut(s) 1099, 2288
Ama87I CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
Aor13HI TCCGGA 2 cut(s) 1700, 1927
AoxI GGCC 4 cut(s) 3, 202, 244, 2813
ApeKI GCWGC 4 cut(s) 440, 926, 1653, 2156
ApoI RAATTY 6 cut(s) 544, 805, 1131, 1978, 2059, 2945
ArsI GACNNNNNNTTYG 2 cut(s) 2909, 2941
AseI ATTAAT 2 cut(s) 978, 1514
AsiGI ACCGGT 4 cut(s) 728, 743, 815, 1495
Asp700I GAANNNNTTC 1 cut(s) 2105
AspLEI GCGC 4 cut(s) 320, 1090, 2161, 2935
AspS9I GGNCC 5 cut(s) 430, 2388, 2450, 2711, 3356
AsuC2I CCSGG 6 cut(s) 611, 1209, 2195, 2196, 3210, 3230
AsuII TTCGAA 4 cut(s) 775, 1179, 1976, 2239
AsuNHI GCTAGC 1 cut(s) 1369
AvaI CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
AvaII GGWCC 5 cut(s) 430, 2388, 2450, 2711, 3356
BalI TGGCCA 1 cut(s) 2815
BanI GGYRCC 1 cut(s) 317
BanII GRGCYC 2 cut(s) 136, 361
BauI CACGAG 1 cut(s) 965
BbsI GAAGAC 7 cut(s) 215, 287, 340, 504, 827, 2442, 2551
Bbv12I GWGCWC 2 cut(s) 136, 361
BbvCI CCTCAGC 1 cut(s) 2652
BbvI GCAGC 4 cut(s) 427, 938, 1665, 2143
BceAI ACGGC 8 cut(s) 189, 199, 305, 331, 901, 1080, 2902, 3398
BcgI CGANNNNNNTGC 2 cut(s) 1335, 1369
BciT130I CCWGG 2 cut(s) 145, 428
BciVI GTATCC 2 cut(s) 1154, 1485
BcnI CCSGG 6 cut(s) 611, 1209, 2195, 2196, 3210, 3230
BcuI ACTAGT 1 cut(s) 2269
BfaI CTAG 9 cut(s) 128, 653, 1370, 1955, 2153, 2270, 2279, 2406, 2847
BfmI CTRYAG 1 cut(s) 782
BfoI RGCGCY 2 cut(s) 321, 1091
BfrI CTTAAG 1 cut(s) 1667
BfuAI ACCTGC 1 cut(s) 775
BfuI GTATCC 2 cut(s) 1154, 1485
BglII AGATCT 1 cut(s) 3105
BisI GCNGC 8 cut(s) 6, 36, 441, 927, 1630, 1654, 2157, 3405
BlpI GCTNAGC 1 cut(s) 912
BlsI GCNGC 8 cut(s) 7, 37, 442, 928, 1631, 1655, 2158, 3406
BmcAI AGTACT 1 cut(s) 1673
Bme1390I CCNGG 8 cut(s) 145, 428, 611, 1209, 2195, 2196, 3210, 3230
Bme18I GGWCC 5 cut(s) 430, 2388, 2450, 2711, 3356
BmeT110I CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
BmgBI CACGTC 1 cut(s) 3076
BmgT120I GGNCC 5 cut(s) 430, 2388, 2450, 2711, 3356
BmiI GGNNCC 4 cut(s) 319, 1232, 2389, 2390
BmrFI CCNGG 8 cut(s) 145, 428, 611, 1209, 2195, 2196, 3210, 3230
BmsI GCATC 2 cut(s) 1463, 2620
BmtI GCTAGC 1 cut(s) 1373
BpiI GAAGAC 7 cut(s) 215, 287, 340, 504, 827, 2442, 2551
BpmI CTGGAG 6 cut(s) 34, 410, 551, 2310, 2961, 3309
Bpu10I CCTNAGC 1 cut(s) 2652
Bpu1102I GCTNAGC 1 cut(s) 912
Bpu14I TTCGAA 4 cut(s) 775, 1179, 1976, 2239
BpuEI CTTGAG 7 cut(s) 72, 1471, 1715, 1832, 1841, 2389, 2713
BpuMI CCSGG 6 cut(s) 611, 1209, 2195, 2196, 3210, 3230
BsaAI YACGTR 1 cut(s) 2399
BsaHI GRCGYC 4 cut(s) 318, 474, 1632, 3297
BsaJI CCNNGG 1 cut(s) 2194
Bsc4I CCNNNNNNNGG 5 cut(s) 263, 946, 1793, 2653, 3041
Bse118I RCCGGY 5 cut(s) 242, 728, 743, 815, 1495
Bse1I ACTGG 5 cut(s) 182, 1568, 1806, 2816, 3292
Bse3DI GCAATG 2 cut(s) 2829, 3027
BseAI TCCGGA 2 cut(s) 1700, 1927
BseBI CCWGG 2 cut(s) 145, 428
BseDI CCNNGG 1 cut(s) 2194
BseGI GGATG 8 cut(s) 683, 1383, 1478, 2589, 2617, 2990, 2999, 3148
BseLI CCNNNNNNNGG 5 cut(s) 263, 946, 1793, 2653, 3041
BseMI GCAATG 2 cut(s) 2829, 3027
BseMII CTCAG 8 cut(s) 265, 290, 564, 1091, 1306, 1408, 1696, 2643
BseNI ACTGG 5 cut(s) 182, 1568, 1806, 2816, 3292
BseRI GAGGAG 2 cut(s) 2445, 3306
BseX3I CGGCCG 1 cut(s) 202
BseXI GCAGC 4 cut(s) 427, 938, 1665, 2143
Bsh1236I CGCG 3 cut(s) 995, 2033, 2161
Bsh1285I CGRYCG 2 cut(s) 205, 2178
BshFI GGCC 4 cut(s) 5, 204, 246, 2815
BshNI GGYRCC 1 cut(s) 317
BshTI ACCGGT 4 cut(s) 728, 743, 815, 1495
BsiEI CGRYCG 2 cut(s) 205, 2178
BsiHKAI GWGCWC 2 cut(s) 136, 361
BsiHKCI CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
BslFI GGGAC 5 cut(s) 636, 2211, 2390, 2401, 2437
BslI CCNNNNNNNGG 5 cut(s) 263, 946, 1793, 2653, 3041
BsmBI CGTCTC 3 cut(s) 236, 336, 3288
BsmFI GGGAC 5 cut(s) 636, 2211, 2390, 2401, 2437
BsmI GAATGC 1 cut(s) 2866
BsnI GGCC 4 cut(s) 5, 204, 246, 2815
BsoBI CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
Bsp119I TTCGAA 4 cut(s) 775, 1179, 1976, 2239
Bsp1286I GDGCHC 2 cut(s) 136, 361
Bsp13I TCCGGA 2 cut(s) 1700, 1927
Bsp1407I TGTACA 1 cut(s) 3078
Bsp1720I GCTNAGC 1 cut(s) 912
BspANI GGCC 4 cut(s) 5, 204, 246, 2815
BspCNI CTCAG 8 cut(s) 264, 289, 563, 1092, 1305, 1407, 1695, 2644
BspEI TCCGGA 2 cut(s) 1700, 1927
BspFNI CGCG 3 cut(s) 995, 2033, 2161
BspLI GGNNCC 4 cut(s) 319, 1232, 2389, 2390
BspMAI CTGCAG 1 cut(s) 786
BspMI ACCTGC 1 cut(s) 775
BspOI GCTAGC 1 cut(s) 1373
BspPI GGATC 8 cut(s) 601, 1293, 1599, 1938, 2046, 3098, 3272, 3374
BspQI GCTCTTC 1 cut(s) 482
BspT104I TTCGAA 4 cut(s) 775, 1179, 1976, 2239
BspT107I GGYRCC 1 cut(s) 317
BspTI CTTAAG 1 cut(s) 1667
BsrDI GCAATG 2 cut(s) 2829, 3027
BsrFI RCCGGY 5 cut(s) 242, 728, 743, 815, 1495
BsrGI TGTACA 1 cut(s) 3078
BsrI ACTGG 5 cut(s) 182, 1568, 1806, 2816, 3292
BssAI RCCGGY 5 cut(s) 242, 728, 743, 815, 1495
BssECI CCNNGG 1 cut(s) 2194
BssNI GRCGYC 4 cut(s) 318, 474, 1632, 3297
BssSI CACGAG 1 cut(s) 965
Bst2BI CACGAG 1 cut(s) 965
Bst2UI CCWGG 2 cut(s) 145, 428
Bst6I CTCTTC 5 cut(s) 482, 2517, 2918, 3161, 3243
BstACI GRCGYC 4 cut(s) 318, 474, 1632, 3297
BstAFI CTTAAG 1 cut(s) 1667
BstAUI TGTACA 1 cut(s) 3078
BstBAI YACGTR 1 cut(s) 2399
BstBI TTCGAA 4 cut(s) 775, 1179, 1976, 2239
BstC8I GCNNGC 3 cut(s) 782, 931, 1371
BstF5I GGATG 8 cut(s) 683, 1383, 1478, 2589, 2617, 2990, 2999, 3148
BstFNI CGCG 3 cut(s) 995, 2033, 2161
BstH2I RGCGCY 2 cut(s) 321, 1091
BstHHI GCGC 4 cut(s) 320, 1090, 2161, 2935
BstMCI CGRYCG 2 cut(s) 205, 2178
BstMWI GCNNNNNNNGC 7 cut(s) 192, 201, 981, 1096, 2156, 3038, 3410
BstNI CCWGG 2 cut(s) 145, 428
BstNSI RCATGY 2 cut(s) 2749, 2804
BstSCI CCNGG 8 cut(s) 143, 426, 609, 1207, 2193, 2194, 3208, 3228
BstSFI CTRYAG 1 cut(s) 782
BstUI CGCG 3 cut(s) 995, 2033, 2161
BstV1I GCAGC 4 cut(s) 427, 938, 1665, 2143
BstV2I GAAGAC 7 cut(s) 215, 287, 340, 504, 827, 2442, 2551
BstX2I RGATCY 5 cut(s) 606, 1285, 1591, 2038, 3105
BstXI CCANNNNNNTGG 1 cut(s) 177
BstYI RGATCY 5 cut(s) 606, 1285, 1591, 2038, 3105
BstZI CGGCCG 1 cut(s) 202
BsuI GTATCC 2 cut(s) 1154, 1485
BsuRI GGCC 4 cut(s) 5, 204, 246, 2815
BtgZI GCGATG 1 cut(s) 690
BtrI CACGTC 1 cut(s) 3076
BtsCI GGATG 8 cut(s) 683, 1383, 1478, 2589, 2617, 2990, 2999, 3148
BtsI GCAGTG 2 cut(s) 2289, 3132
BtsIMutI CAGTG 2 cut(s) 2289, 3132
BveI ACCTGC 1 cut(s) 775
Cac8I GCNNGC 3 cut(s) 782, 931, 1371
CaiI CAGNNNCTG 2 cut(s) 1099, 2288
CfoI GCGC 4 cut(s) 320, 1090, 2161, 2935
Cfr10I RCCGGY 5 cut(s) 242, 728, 743, 815, 1495
Cfr13I GGNCC 5 cut(s) 430, 2388, 2450, 2711, 3356
Cfr9I CCCGGG 1 cut(s) 2194
CpoI CGGWCCG 1 cut(s) 3356
CseI GACGC 3 cut(s) 1621, 2810, 2927
Csp6I GTAC 9 cut(s) 819, 1300, 1637, 1672, 1776, 2400, 2909, 3079, 3285
CspAI ACCGGT 4 cut(s) 728, 743, 815, 1495
CspCI CAANNNNNGTGG 4 cut(s) 1450, 1485, 2428, 2463
CspI CGGWCCG 1 cut(s) 3356
CviAII CATG 5 cut(s) 171, 868, 2746, 2801, 3334
CviQI GTAC 9 cut(s) 819, 1300, 1637, 1672, 1776, 2400, 2909, 3079, 3285
DinI GGCGCC 1 cut(s) 319
DraI TTTAAA 1 cut(s) 1842
DrdI GACNNNNNNGTC 2 cut(s) 479, 2801
DseDI GACNNNNNNGTC 2 cut(s) 479, 2801
EaeI YGGCCR 4 cut(s) 3, 202, 244, 2813
EagI CGGCCG 1 cut(s) 202
Eam1104I CTCTTC 5 cut(s) 482, 2517, 2918, 3161, 3243
EarI CTCTTC 5 cut(s) 482, 2517, 2918, 3161, 3243
EciI GGCGGA 3 cut(s) 58, 2362, 3364
Ecl136II GAGCTC 2 cut(s) 134, 359
EclXI CGGCCG 1 cut(s) 202
Eco24I GRGCYC 2 cut(s) 136, 361
Eco32I GATATC 1 cut(s) 1245
Eco47I GGWCC 5 cut(s) 430, 2388, 2450, 2711, 3356
Eco52I CGGCCG 1 cut(s) 202
Eco53kI GAGCTC 2 cut(s) 134, 359
Eco57I CTGAAG 4 cut(s) 703, 1076, 1508, 3003
Eco88I CYCGRG 6 cut(s) 137, 638, 1195, 1267, 1307, 2194
EcoICRI GAGCTC 2 cut(s) 134, 359
EcoO109I RGGNCCY 2 cut(s) 430, 2388
EcoRI GAATTC 4 cut(s) 805, 1978, 2059, 2945
EcoRII CCWGG 2 cut(s) 143, 426
EcoRV GATATC 1 cut(s) 1245
EcoT38I GRGCYC 2 cut(s) 136, 361
EgeI GGCGCC 1 cut(s) 319
EheI GGCGCC 1 cut(s) 319
Esp3I CGTCTC 3 cut(s) 236, 336, 3288
FaeI CATG 5 cut(s) 174, 871, 2749, 2804, 3337
FaqI GGGAC 5 cut(s) 636, 2211, 2390, 2401, 2437
FatI CATG 5 cut(s) 170, 867, 2745, 2800, 3333
FauI CCCGC 5 cut(s) 1000, 1469, 1791, 3034, 3409
FblI GTMKAC 1 cut(s) 2602
Fnu4HI GCNGC 8 cut(s) 6, 36, 441, 927, 1630, 1654, 2157, 3405
FokI GGATG 8 cut(s) 670, 1370, 1485, 2596, 2624, 2977, 2986, 3155
FriOI GRGCYC 2 cut(s) 136, 361
Fsp4HI GCNGC 8 cut(s) 6, 36, 441, 927, 1630, 1654, 2157, 3405
FspBI CTAG 9 cut(s) 128, 653, 1370, 1955, 2153, 2270, 2279, 2406, 2847
GlaI GCGC 4 cut(s) 319, 1089, 2160, 2934
GluI GCNGC 8 cut(s) 6, 36, 441, 927, 1630, 1654, 2157, 3405
GsuI CTGGAG 6 cut(s) 34, 410, 551, 2310, 2961, 3309
HaeII RGCGCY 2 cut(s) 321, 1091
HaeIII GGCC 4 cut(s) 5, 204, 246, 2815
HgaI GACGC 3 cut(s) 1621, 2810, 2927
HhaI GCGC 4 cut(s) 320, 1090, 2161, 2935
Hin1I GRCGYC 4 cut(s) 318, 474, 1632, 3297
Hin1II CATG 5 cut(s) 174, 871, 2749, 2804, 3337
Hin6I GCGC 4 cut(s) 318, 1088, 2159, 2933
HinP1I GCGC 4 cut(s) 318, 1088, 2159, 2933
HincII GTYRAC 4 cut(s) 273, 1002, 1482, 2973
HindII GTYRAC 4 cut(s) 273, 1002, 1482, 2973
HindIII AAGCTT 3 cut(s) 1447, 1520, 1889
HpaI GTTAAC 1 cut(s) 1482
HpyCH4V TGCA 8 cut(s) 521, 784, 926, 1155, 2633, 2776, 2866, 3032
HpyF10VI GCNNNNNNNGC 7 cut(s) 192, 201, 981, 1096, 2156, 3038, 3410
Hsp92I GRCGYC 4 cut(s) 318, 474, 1632, 3297
Hsp92II CATG 5 cut(s) 174, 871, 2749, 2804, 3337
HspAI GCGC 4 cut(s) 318, 1088, 2159, 2933
KasI GGCGCC 1 cut(s) 317
KflI GGGWCCC 1 cut(s) 2388
Kpn2I TCCGGA 2 cut(s) 1700, 1927
KspAI GTTAAC 1 cut(s) 1482
LguI GCTCTTC 1 cut(s) 482
LmnI GCTCC 8 cut(s) 131, 172, 285, 1096, 1230, 1343, 2291, 3220
Lsp1109I GCAGC 4 cut(s) 427, 938, 1665, 2143
LweI GCATC 2 cut(s) 1463, 2620
MaeI CTAG 9 cut(s) 128, 653, 1370, 1955, 2153, 2270, 2279, 2406, 2847
MflI RGATCY 5 cut(s) 606, 1285, 1591, 2038, 3105
MhlI GDGCHC 2 cut(s) 136, 361
MlsI TGGCCA 1 cut(s) 2815
MluNI TGGCCA 1 cut(s) 2815
Mly113I GGCGCC 1 cut(s) 318
MmeI TCCRAC 9 cut(s) 495, 1105, 1160, 1253, 1335, 1469, 1713, 2016, 3198
Mox20I TGGCCA 1 cut(s) 2815
MroI TCCGGA 2 cut(s) 1700, 1927
MroXI GAANNNNTTC 1 cut(s) 2105
MscI TGGCCA 1 cut(s) 2815
Msp20I TGGCCA 1 cut(s) 2815
MspA1I CMGCKG 2 cut(s) 554, 2981
MspCI CTTAAG 1 cut(s) 1667
MspR9I CCNGG 8 cut(s) 145, 428, 611, 1209, 2195, 2196, 3210, 3230
Mva1269I GAATGC 1 cut(s) 2866
MvaI CCWGG 2 cut(s) 145, 428
MvnI CGCG 3 cut(s) 995, 2033, 2161
MwoI GCNNNNNNNGC 7 cut(s) 192, 201, 981, 1096, 2156, 3038, 3410
NarI GGCGCC 1 cut(s) 318
NciI CCSGG 6 cut(s) 611, 1209, 2195, 2196, 3210, 3230
NheI GCTAGC 1 cut(s) 1369
NlaIII CATG 5 cut(s) 174, 871, 2749, 2804, 3337
NlaIV GGNNCC 4 cut(s) 319, 1232, 2389, 2390
NmeAIII GCCGAG 2 cut(s) 1605, 2065
NmuCI GTSAC 4 cut(s) 475, 1847, 1901, 2272
NspI RCATGY 2 cut(s) 2749, 2804
NspV TTCGAA 4 cut(s) 775, 1179, 1976, 2239
PaeR7I CTCGAG 3 cut(s) 137, 638, 1307
PaqCI CACCTGC 1 cut(s) 775
PciI ACATGT 1 cut(s) 2800
PciSI GCTCTTC 1 cut(s) 482
PcsI WCGNNNNNNNCGW 6 cut(s) 226, 963, 1176, 1632, 2526, 2913
PctI GAATGC 1 cut(s) 2866
PdmI GAANNNNTTC 1 cut(s) 2105
PfoI TCCNGGA 1 cut(s) 143
PinAI ACCGGT 4 cut(s) 728, 743, 815, 1495
PkrI GCNGC 8 cut(s) 7, 37, 442, 928, 1631, 1655, 2158, 3406
PluTI GGCGCC 1 cut(s) 321
Ppu21I YACGTR 1 cut(s) 2399
PpuMI RGGWCCY 2 cut(s) 430, 2388
PscI ACATGT 1 cut(s) 2800
PshBI ATTAAT 2 cut(s) 978, 1514
Psp124BI GAGCTC 2 cut(s) 136, 361
Psp1406I AACGTT 2 cut(s) 2235, 2636
Psp5II RGGWCCY 2 cut(s) 430, 2388
Psp6I CCWGG 2 cut(s) 143, 426
PspGI CCWGG 2 cut(s) 143, 426
PspN4I GGNNCC 4 cut(s) 319, 1232, 2389, 2390
PspPI GGNCC 5 cut(s) 430, 2388, 2450, 2711, 3356
PspPPI RGGWCCY 2 cut(s) 430, 2388
PspXI VCTCGAGB 1 cut(s) 638
PstI CTGCAG 1 cut(s) 786
PstNI CAGNNNCTG 2 cut(s) 1099, 2288
PsuI RGATCY 5 cut(s) 606, 1285, 1591, 2038, 3105
PvuII CAGCTG 1 cut(s) 2981
RsaI GTAC 9 cut(s) 820, 1301, 1638, 1673, 1777, 2401, 2910, 3080, 3286
RsaNI GTAC 9 cut(s) 819, 1300, 1637, 1672, 1776, 2400, 2909, 3079, 3285
Rsr2I CGGWCCG 1 cut(s) 3356
RsrII CGGWCCG 1 cut(s) 3356
SacI GAGCTC 2 cut(s) 136, 361
SapI GCTCTTC 1 cut(s) 482
SatI GCNGC 8 cut(s) 6, 36, 441, 927, 1630, 1654, 2157, 3405
Sau96I GGNCC 5 cut(s) 430, 2388, 2450, 2711, 3356
SbfI CCTGCAGG 1 cut(s) 786
ScaI AGTACT 1 cut(s) 1673
ScrFI CCNGG 8 cut(s) 145, 428, 611, 1209, 2195, 2196, 3210, 3230
SdaI CCTGCAGG 1 cut(s) 786
SduI GDGCHC 2 cut(s) 136, 361
SfaNI GCATC 2 cut(s) 1463, 2620
SfcI CTRYAG 1 cut(s) 782
SfoI GGCGCC 1 cut(s) 319
Sfr274I CTCGAG 3 cut(s) 137, 638, 1307
SfuI TTCGAA 4 cut(s) 775, 1179, 1976, 2239
SinI GGWCC 5 cut(s) 430, 2388, 2450, 2711, 3356
SlaI CTCGAG 3 cut(s) 137, 638, 1307
SmaI CCCGGG 1 cut(s) 2196
SpeI ACTAGT 1 cut(s) 2269
Sse8387I CCTGCAGG 1 cut(s) 786
SspDI GGCGCC 1 cut(s) 317
SspMI CTAG 9 cut(s) 128, 653, 1370, 1955, 2153, 2270, 2279, 2406, 2847
SstI GAGCTC 2 cut(s) 136, 361
StyD4I CCNGG 8 cut(s) 143, 426, 609, 1207, 2193, 2194, 3208, 3228
TaqII GACCGA 1 cut(s) 3344
TatI WGTACW 3 cut(s) 1671, 3078, 3284
TauI GCSGC 4 cut(s) 8, 38, 1632, 3407
TscAI CASTG 2 cut(s) 2289, 3132
TseFI GTSAC 4 cut(s) 475, 1847, 1901, 2272
TseI GCWGC 4 cut(s) 440, 926, 1653, 2156
Tsp45I GTSAC 4 cut(s) 475, 1847, 1901, 2272
TspDTI ATGAA 9 cut(s) 549, 693, 783, 798, 1341, 1532, 2988, 3159, 3322
TspMI CCCGGG 1 cut(s) 2194
TspRI CASTG 2 cut(s) 2289, 3132
Vha464I CTTAAG 1 cut(s) 1667
VpaK11BI GGWCC 5 cut(s) 430, 2388, 2450, 2711, 3356
VspI ATTAAT 2 cut(s) 978, 1514
XapI RAATTY 6 cut(s) 544, 805, 1131, 1978, 2059, 2945
XbaI TCTAGA 2 cut(s) 1954, 2405
XceI RCATGY 2 cut(s) 2749, 2804
XhoI CTCGAG 3 cut(s) 137, 638, 1307
XmaI CCCGGG 1 cut(s) 2194
XmiI GTMKAC 1 cut(s) 2602
XmnI GAANNNNTTC 1 cut(s) 2105
XspI CTAG 9 cut(s) 128, 653, 1370, 1955, 2153, 2270, 2279, 2406, 2847
ZraI GACGTC 2 cut(s) 475, 3298
ZrmI AGTACT 1 cut(s) 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.