AT1G78230

Leucine-rich repeats, typical (most populated) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0008810
Physical Location & Seq
Forward (+)
29430052 .. 29432764
2713 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78230.1

Sequence Viewer

Length: 2046 bp
ATGTGGCTCTTTTGCATGTTCTGTCATAAACACGTCCATTTCATTCATCCTCTTCTTCTTCTTCTCCTTCTATCCTCTGTTTTTTGCCCTCTCTCTTTGTTTAGTGGCTGTGGTCGTTTGTATTTGGTGAAACATAATTTAAAAACAAGTGCGGCTATCTTTAACTCTGGCCGACACATCGGCGGATTCGACTGTGGTCGGATCAAGAAGTGCTTCCTTTTTTTCCGGCGTCGTTTCTTCTTTTATATTCATCGATTTGGTGCTCTCGCAACTTCCAATAGATTACGGCTAATTTCTAAAATGAAGATATTACCATGCTTTGGATTTATCCGTAGAAAGAAAAATAAGGGGAATTCAAAACCTCAGAAAACGCAGAGAATACTTCAGATCAGACTTGAAGAGCCAGTGAAGCCTTTGGAGAATGATGAGCCTAACAACAAGGACAGTCCTATCAAGCACGAGTCATATGACGGCGAAGATGAACGTGACGATAAGGATTCAACGAACCGTGAGTTTTCTAAATTCCACGTTCACGAACGAGCCGTTGAATCTGTGAAAAGCAAGGAGGAAGTCACAGATACTTCTGAAAACGGCGATGACAATGACGAGGATGAAGGAGGTCACGTCAGTGATCCTGGATTAGGCAAAACTACGGCTTGGGTGACGTCTCCTAAGCTTAAACGATCTTGCTCCACTCTCAGCAAGTTTAATGGCCGGTTCCATGGTTCTGATCTCCATGACCTGAAAGAGACCGTTCCAGTTAGTAATGAATCAGTGAGGTCTCATAGAAGTGCAGATAGAGTGATGCTCAAGAAACATTCGTCGATGCAGATACTTCCCTCTGGGAGCCGGCGGCTCTGGTGGAAGTTGTTCCTATGGAGCCATAGGAACCTTCACAAACACCGTGTCTCGCTAAAGTCACAGCCTTTAAACAAGAACCAGCAGTCTGGATACACCTCTGACTTTGCTGAGCACAACCAATCCAGCCATGAAGAAGAATCTACAAACTATTGCGCTGATTTCACCAACCAGTCATCAAACTTGTGGCCTCATCATAATCAGTGGGTCGCGTTCTCTGCCGAGTCCTCGTCAATGAAGCGAGTGGACGAGTGGGTAAGAGGACTGGATGTCGAAACCGTGGTTCCAGTGAACGAGGATAAGGATGTCTTGGCCATCTTCCCAACCTCTCCTAATACTGAGAGATCACCCTTAGGAAATGTGGTTCAGTCCGGAAACGTCTCAGAGGCTATAGTGCACGCAAATAGCCTTATTCAATCGCTGAGCAAATCATCGAGCGTGGCTCACATCTCGAGCATCGGCTTGAAAGCTATCCCGAGCATCTCACATTTTACCAGCCTCAAGTCGATTGATCTATCAAACAACTTCATAGTTCAAATTACTCCTGCATCGCTTCCTAAGGGCCTCCACGCGTTGAACCTTTCCAAGAACAAGATCAGTGTTATCGAAGGACTAAGAGATTTGACACGCCTAAGAGTACTCGATCTAAGTTACAACCGAATTTCTCGCATTGGACAAGGTTTATCAAACTGTACACTGATCAAAGAACTATACCTAGCTGGGAACAAGATCAGCAATGTAGAAGGCTTACACAGATTGCTGAAACTTATTGTTCTTGATCTTAGTTTCAACAAGATCGCCACCACCAAAGCAATAGGCCAGCTTGTAGCCAACTACAACTCTCTCGTTGCTTTGAACATCCTCGGAAACCCGATCCAGAACAATGTAGGCGAGGACCAGCTACGCAAGACCGTTTCCAGCCTTCTCCCTAAGCTAGTTTACCATAACAAGCAGCTCATTAAGCCACAACGAGCCAGGGAAGTTCTCAAAGATAGTGTAGCGAGAGCTGCGTTTGGTGGTGGAGATTCTTTGCACCACAGGCGCAAAAGAACATCCACCAAGAGTGTTGTTGGATCAGCCTCCCCTAGCGTTCACCACCGAGGCCACATTGCAAAAGGACGTGGATCCAAAAACAGAAGCCAACGTCAACTAAGAAAAACTTCAGCTGCAGGGACGCCATCACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001578 GO:0001889 GO:0001947 GO:0002009 GO:0003002 GO:0003007 GO:0003143 GO:0003341 GO:0003352 GO:0003356 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0005929 GO:0005930 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009987 GO:0016020 GO:0016043 GO:0016604 GO:0016607 GO:0022607 GO:0030030 GO:0030031 GO:0030323 GO:0030324 GO:0031016 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032838 GO:0032879 GO:0032886 GO:0034622 GO:0035050 GO:0035082 GO:0035239 GO:0035295 GO:0035469 GO:0036158 GO:0036159 GO:0042995 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044451 GO:0044458 GO:0044463 GO:0044464 GO:0044782 GO:0044877 GO:0048513 GO:0048562 GO:0048565 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0050789 GO:0050794 GO:0051270 GO:0055123 GO:0060271 GO:0060429 GO:0060541 GO:0060562 GO:0060632 GO:0060972 GO:0061008 GO:0061371 GO:0065003 GO:0065007 GO:0070013 GO:0070286 GO:0070840 GO:0070925 GO:0071840 GO:0071907 GO:0071910 GO:0071944 GO:0072359 GO:0097014 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_6 LRR_8

Protein Analysis

681

Amino Acids

76.55

Weight (kDa)

9.88

Isoelectric Point (pI)

48.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 452 - 507 6e-10 Leucine rich repeat
LRR_4 PF12799 475 - 514 6.7e-07 Leucine Rich repeats (2 copies)
LRR_9 PF14580 475 - 556 5.2e-06 Leucine-rich repeat
LRR_8 PF13855 492 - 530 7.2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 668
AccB7I CCANNNNNTGG 1 cut(s) 320
AccII CGCG 2 cut(s) 1070, 1430
AccIII TCCGGA 1 cut(s) 1229
AciI CCGC 3 cut(s) 152, 183, 853
AclWI GGATC 6 cut(s) 209, 626, 1726, 1939, 1977, 1990
AcoI YGGCCR 3 cut(s) 169, 712, 1170
AcsI RAATTY 3 cut(s) 352, 521, 1518
AcuI CTGAAG 2 cut(s) 368, 2004
AcyI GRCGYC 3 cut(s) 229, 665, 2033
AfaI GTAC 2 cut(s) 1497, 1552
AfiI CCNNNNNNNGG 2 cut(s) 320, 641
AflIII ACRYGT 2 cut(s) 31, 1428
AhdI GACNNNNNGTC 1 cut(s) 1127
AjiI CACGTC 3 cut(s) 34, 625, 1979
AjnI CCWGG 2 cut(s) 634, 1832
AleI CACNNNNGTG 1 cut(s) 627
AloI GAACNNNNNNTCC 2 cut(s) 1206, 1238
AluBI AGCT 9 cut(s) 676, 1328, 1577, 1681, 1759, 1792, 1813, 1865, 2024
AluI AGCT 9 cut(s) 676, 1328, 1577, 1681, 1759, 1792, 1813, 1865, 2024
Alw21I GWGCWC 3 cut(s) 265, 975, 1257
Alw26I GTCTC 5 cut(s) 672, 743, 786, 913, 1243
Alw44I GTGCAC 1 cut(s) 1253
AlwI GGATC 6 cut(s) 209, 626, 1726, 1939, 1977, 1990
Ama87I CYCGRG 2 cut(s) 1309, 1333
Aor13HI TCCGGA 1 cut(s) 1229
AoxI GGCC 7 cut(s) 169, 712, 1046, 1170, 1420, 1675, 1960
ApaLI GTGCAC 1 cut(s) 1253
ApeKI GCWGC 3 cut(s) 1810, 1865, 2024
ApoI RAATTY 3 cut(s) 352, 521, 1518
ArsI GACNNNNNNTTYG 2 cut(s) 891, 923
Asp700I GAANNNNTTC 3 cut(s) 212, 869, 2017
AspLEI GCGC 2 cut(s) 1016, 1902
AspS9I GGNCC 2 cut(s) 1420, 1753
AsuHPI GGTGA 5 cut(s) 139, 673, 1015, 1197, 1943
AvaI CYCGRG 2 cut(s) 1309, 1333
AvaII GGWCC 1 cut(s) 1753
AxyI CCTNAGG 2 cut(s) 1210, 1416
BaeGI GKGCMC 1 cut(s) 1257
BalI TGGCCA 1 cut(s) 1172
BamHI GGATCC 1 cut(s) 1982
BauI CACGAG 1 cut(s) 458
Bbv12I GWGCWC 3 cut(s) 265, 975, 1257
BbvI GCAGC 3 cut(s) 1822, 1852, 2011
BccI CCATC 2 cut(s) 1181, 2044
BceAI ACGGC 5 cut(s) 302, 487, 527, 607, 669
BciT130I CCWGG 2 cut(s) 636, 1834
BciVI GTATCC 1 cut(s) 944
BclI TGATCA 1 cut(s) 1557
BcoDI GTCTC 5 cut(s) 672, 743, 786, 913, 1243
BfaI CTAG 3 cut(s) 1574, 1793, 1944
BfmI CTRYAG 2 cut(s) 1248, 2025
BfuI GTATCC 1 cut(s) 944
BisI GCNGC 5 cut(s) 153, 854, 1811, 1866, 2025
BlpI GCTNAGC 2 cut(s) 969, 1280
BlsI GCNGC 5 cut(s) 154, 855, 1812, 1867, 2026
BmcAI AGTACT 1 cut(s) 1497
Bme1390I CCNGG 2 cut(s) 636, 1834
Bme18I GGWCC 1 cut(s) 1753
BmeRI GACNNNNNGTC 1 cut(s) 1127
BmeT110I CYCGRG 2 cut(s) 1309, 1333
BmgBI CACGTC 3 cut(s) 34, 625, 1979
BmgT120I GGNCC 2 cut(s) 1420, 1753
BmiI GGNNCC 6 cut(s) 719, 848, 881, 890, 1143, 1984
BmrFI CCNGG 2 cut(s) 636, 1834
BmsI GCATC 5 cut(s) 795, 816, 1323, 1347, 1415
BoxI GACNNNNGTC 1 cut(s) 195
BplI GAGNNNNNCTC 4 cut(s) 792, 824, 1285, 1317
Bpu10I CCTNAGC 2 cut(s) 672, 1788
Bpu1102I GCTNAGC 2 cut(s) 969, 1280
BpuEI CTTGAG 2 cut(s) 794, 1343
Bsa29I ATCGAT 1 cut(s) 253
BsaHI GRCGYC 3 cut(s) 229, 665, 2033
BsaI GGTCTC 2 cut(s) 743, 786
BsaJI CCNNGG 5 cut(s) 721, 1137, 1720, 1833, 1957
BsaWI WCCGGW 1 cut(s) 1229
BsaXI ACNNNNNCTCC 2 cut(s) 609, 639
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 641
Bse118I RCCGGY 2 cut(s) 714, 849
Bse1I ACTGG 5 cut(s) 404, 758, 1030, 1128, 1145
Bse21I CCTNAGG 2 cut(s) 1210, 1416
Bse3DI GCAATG 2 cut(s) 1600, 1965
BseAI TCCGGA 1 cut(s) 1229
BseBI CCWGG 2 cut(s) 636, 1834
BseCI ATCGAT 1 cut(s) 253
BseDI CCNNGG 5 cut(s) 721, 1137, 1720, 1833, 1957
BseGI GGATG 6 cut(s) 46, 616, 1132, 1168, 1716, 1910
BseLI CCNNNNNNNGG 2 cut(s) 320, 641
BseMI GCAATG 2 cut(s) 1600, 1965
BseMII CTCAG 6 cut(s) 377, 712, 960, 1188, 1254, 1271
BseNI ACTGG 5 cut(s) 404, 758, 1030, 1128, 1145
BseSI GKGCMC 1 cut(s) 1257
BseXI GCAGC 3 cut(s) 1822, 1852, 2011
BseYI CCCAGC 1 cut(s) 1577
BsgI GTGCAG 1 cut(s) 813
Bsh1236I CGCG 2 cut(s) 1070, 1430
BshFI GGCC 7 cut(s) 171, 714, 1048, 1172, 1422, 1677, 1962
BshVI ATCGAT 1 cut(s) 253
BsiHKAI GWGCWC 3 cut(s) 265, 975, 1257
BsiHKCI CYCGRG 2 cut(s) 1309, 1333
BsiSI CCGG 4 cut(s) 226, 715, 850, 1230
BslI CCNNNNNNNGG 2 cut(s) 320, 641
BsmAI GTCTC 5 cut(s) 672, 743, 786, 913, 1243
BsmBI CGTCTC 2 cut(s) 672, 1243
BsnI GGCC 7 cut(s) 171, 714, 1048, 1172, 1422, 1677, 1962
Bso31I GGTCTC 2 cut(s) 743, 786
BsoBI CYCGRG 2 cut(s) 1309, 1333
Bsp1286I GDGCHC 3 cut(s) 265, 975, 1257
Bsp13I TCCGGA 1 cut(s) 1229
Bsp1407I TGTACA 1 cut(s) 1550
Bsp1720I GCTNAGC 2 cut(s) 969, 1280
Bsp19I CCATGG 1 cut(s) 721
BspACI CCGC 3 cut(s) 152, 183, 853
BspANI GGCC 7 cut(s) 171, 714, 1048, 1172, 1422, 1677, 1962
BspCNI CTCAG 6 cut(s) 376, 711, 961, 1189, 1253, 1272
BspDI ATCGAT 1 cut(s) 253
BspEI TCCGGA 1 cut(s) 1229
BspFNI CGCG 2 cut(s) 1070, 1430
BspLI GGNNCC 6 cut(s) 719, 848, 881, 890, 1143, 1984
BspMAI CTGCAG 1 cut(s) 2029
BspPI GGATC 6 cut(s) 209, 626, 1726, 1939, 1977, 1990
BspQI GCTCTTC 1 cut(s) 393
BspTNI GGTCTC 2 cut(s) 743, 786
BsrDI GCAATG 2 cut(s) 1600, 1965
BsrFI RCCGGY 2 cut(s) 714, 849
BsrGI TGTACA 1 cut(s) 1550
BsrI ACTGG 5 cut(s) 404, 758, 1030, 1128, 1145
BssAI RCCGGY 2 cut(s) 714, 849
BssECI CCNNGG 5 cut(s) 721, 1137, 1720, 1833, 1957
BssNI GRCGYC 3 cut(s) 229, 665, 2033
BssSI CACGAG 1 cut(s) 458
BssT1I CCWWGG 1 cut(s) 721
Bst2BI CACGAG 1 cut(s) 458
Bst2UI CCWGG 2 cut(s) 636, 1834
Bst4CI ACNGT 8 cut(s) 194, 446, 509, 754, 905, 1138, 1550, 1771
Bst6I CTCTTC 2 cut(s) 57, 393
BstACI GRCGYC 3 cut(s) 229, 665, 2033
BstAUI TGTACA 1 cut(s) 1550
BstC8I GCNNGC 3 cut(s) 851, 1257, 1679
BstDSI CCRYGG 2 cut(s) 721, 1137
BstENI CCTNNNNNAGG 1 cut(s) 639
BstF5I GGATG 6 cut(s) 46, 616, 1132, 1168, 1716, 1910
BstFNI CGCG 2 cut(s) 1070, 1430
BstHHI GCGC 2 cut(s) 1016, 1902
BstMAI GTCTC 5 cut(s) 672, 743, 786, 913, 1243
BstMWI GCNNNNNNNGC 5 cut(s) 409, 1076, 1819, 1865, 1897
BstNI CCWGG 2 cut(s) 636, 1834
BstNSI RCATGY 1 cut(s) 19
BstPAI GACNNNNGTC 1 cut(s) 195
BstSCI CCNGG 2 cut(s) 634, 1832
BstSFI CTRYAG 2 cut(s) 1248, 2025
BstSLI GKGCMC 1 cut(s) 1257
BstUI CGCG 2 cut(s) 1070, 1430
BstV1I GCAGC 3 cut(s) 1822, 1852, 2011
BstX2I RGATCY 1 cut(s) 1982
BstXI CCANNNNNNTGG 1 cut(s) 947
BstYI RGATCY 1 cut(s) 1982
Bsu15I ATCGAT 1 cut(s) 253
Bsu36I CCTNAGG 2 cut(s) 1210, 1416
BsuI GTATCC 1 cut(s) 944
BsuRI GGCC 7 cut(s) 171, 714, 1048, 1172, 1422, 1677, 1962
BsuTUI ATCGAT 1 cut(s) 253
BtgI CCRYGG 2 cut(s) 721, 1137
BtgZI GCGATG 2 cut(s) 609, 1392
BtrI CACGTC 3 cut(s) 34, 625, 1979
BtsCI GGATG 6 cut(s) 46, 616, 1132, 1168, 1716, 1910
BtsIMutI CAGTG 7 cut(s) 411, 634, 780, 1067, 1152, 1462, 1553
Cac8I GCNNGC 3 cut(s) 851, 1257, 1679
CfoI GCGC 2 cut(s) 1016, 1902
Cfr10I RCCGGY 2 cut(s) 714, 849
Cfr13I GGNCC 2 cut(s) 1420, 1753
ClaI ATCGAT 1 cut(s) 253
CseI GACGC 2 cut(s) 218, 2041
Csp6I GTAC 2 cut(s) 1496, 1551
CviAII CATG 5 cut(s) 16, 315, 722, 737, 989
CviQI GTAC 2 cut(s) 1496, 1551
DraI TTTAAA 2 cut(s) 141, 930
DriI GACNNNNNGTC 1 cut(s) 1127
EaeI YGGCCR 3 cut(s) 169, 712, 1170
Eam1104I CTCTTC 2 cut(s) 57, 393
Eam1105I GACNNNNNGTC 1 cut(s) 1127
EarI CTCTTC 2 cut(s) 57, 393
EciI GGCGGA 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 721
Eco31I GGTCTC 2 cut(s) 743, 786
Eco47I GGWCC 1 cut(s) 1753
Eco57I CTGAAG 2 cut(s) 368, 2004
Eco81I CCTNAGG 2 cut(s) 1210, 1416
Eco88I CYCGRG 2 cut(s) 1309, 1333
EcoNI CCTNNNNNAGG 1 cut(s) 639
EcoO109I RGGNCCY 1 cut(s) 1420
EcoRI GAATTC 1 cut(s) 352
EcoRII CCWGG 2 cut(s) 634, 1832
EcoT14I CCWWGG 1 cut(s) 721
ErhI CCWWGG 1 cut(s) 721
Esp3I CGTCTC 2 cut(s) 672, 1243
FaeI CATG 5 cut(s) 19, 318, 725, 740, 992
FalI AAGNNNNNCTT 6 cut(s) 197, 229, 1151, 1183, 2002, 2034
FatI CATG 5 cut(s) 15, 314, 721, 736, 988
FauNDI CATATG 1 cut(s) 466
FbaI TGATCA 1 cut(s) 1557
Fnu4HI GCNGC 5 cut(s) 153, 854, 1811, 1866, 2025
FokI GGATG 6 cut(s) 33, 623, 1139, 1175, 1703, 1897
Fsp4HI GCNGC 5 cut(s) 153, 854, 1811, 1866, 2025
FspBI CTAG 3 cut(s) 1574, 1793, 1944
GlaI GCGC 2 cut(s) 1015, 1901
GluI GCNGC 5 cut(s) 153, 854, 1811, 1866, 2025
GsaI CCCAGC 1 cut(s) 1581
HaeIII GGCC 7 cut(s) 171, 714, 1048, 1172, 1422, 1677, 1962
HapII CCGG 4 cut(s) 226, 715, 850, 1230
HgaI GACGC 2 cut(s) 218, 2041
HhaI GCGC 2 cut(s) 1016, 1902
Hin1I GRCGYC 3 cut(s) 229, 665, 2033
Hin1II CATG 5 cut(s) 19, 318, 725, 740, 992
Hin6I GCGC 2 cut(s) 1014, 1900
HinP1I GCGC 2 cut(s) 1014, 1900
HincII GTYRAC 1 cut(s) 2006
HindII GTYRAC 1 cut(s) 2006
HindIII AAGCTT 1 cut(s) 674
HinfI GANTC 8 cut(s) 186, 461, 497, 548, 770, 998, 1082, 1883
HpaII CCGG 4 cut(s) 226, 715, 850, 1230
HphI GGTGA 5 cut(s) 139, 673, 1015, 1197, 1943
Hpy166II GTNNAC 8 cut(s) 532, 1105, 1150, 1255, 1553, 1798, 1951, 2006
Hpy188I TCNGA 9 cut(s) 201, 366, 387, 392, 586, 730, 961, 1243, 1724
Hpy188III TCNNGA 9 cut(s) 205, 533, 811, 948, 1230, 1309, 1333, 1634, 1735
Hpy8I GTNNAC 8 cut(s) 532, 1105, 1150, 1255, 1553, 1798, 1951, 2006
Hpy99I CGWCG 2 cut(s) 234, 826
HpyAV CCTTC 6 cut(s) 77, 608, 902, 1460, 1595, 1790
HpyCH4III ACNGT 8 cut(s) 194, 446, 509, 754, 905, 1138, 1550, 1771
HpyCH4IV ACGT 8 cut(s) 33, 484, 528, 624, 665, 1236, 1978, 2002
HpyCH4V TGCA 8 cut(s) 15, 794, 829, 1255, 1406, 1891, 1970, 2027
HpyF10VI GCNNNNNNNGC 5 cut(s) 409, 1076, 1819, 1865, 1897
HpySE526I ACGT 8 cut(s) 33, 484, 528, 624, 665, 1236, 1978, 2002
Hsp92I GRCGYC 3 cut(s) 229, 665, 2033
Hsp92II CATG 5 cut(s) 19, 318, 725, 740, 992
HspAI GCGC 2 cut(s) 1014, 1900
Kpn2I TCCGGA 1 cut(s) 1229
KroI GCCGGC 1 cut(s) 849
KroNI GCCGGC 1 cut(s) 851
Ksp22I TGATCA 1 cut(s) 1557
LguI GCTCTTC 1 cut(s) 393
LmnI GCTCC 3 cut(s) 695, 846, 879
Lsp1109I GCAGC 3 cut(s) 1822, 1852, 2011
LweI GCATC 5 cut(s) 795, 816, 1323, 1347, 1415
MaeI CTAG 3 cut(s) 1574, 1793, 1944
MaeII ACGT 8 cut(s) 33, 484, 528, 624, 665, 1236, 1978, 2002
MaeIII GTNAC 6 cut(s) 485, 571, 620, 661, 918, 1508
MflI RGATCY 1 cut(s) 1982
MhlI GDGCHC 3 cut(s) 265, 975, 1257
MlsI TGGCCA 1 cut(s) 1172
MluCI AATT 6 cut(s) 136, 291, 352, 521, 1395, 1518
MluI ACGCGT 1 cut(s) 1428
MluNI TGGCCA 1 cut(s) 1172
MlyI GAGTC 2 cut(s) 470, 1091
MmeI TCCRAC 2 cut(s) 179, 1909
Mox20I TGGCCA 1 cut(s) 1172
MroI TCCGGA 1 cut(s) 1229
MroNI GCCGGC 1 cut(s) 849
MroXI GAANNNNTTC 3 cut(s) 212, 869, 2017
MscI TGGCCA 1 cut(s) 1172
MseI TTAA 6 cut(s) 140, 162, 678, 708, 929, 1818
MslI CAYNNNNRTG 2 cut(s) 627, 789
Msp20I TGGCCA 1 cut(s) 1172
MspA1I CMGCKG 1 cut(s) 2024
MspI CCGG 4 cut(s) 226, 715, 850, 1230
MspR9I CCNGG 2 cut(s) 636, 1834
MvaI CCWGG 2 cut(s) 636, 1834
MvnI CGCG 2 cut(s) 1070, 1430
MwoI GCNNNNNNNGC 5 cut(s) 409, 1076, 1819, 1865, 1897
NaeI GCCGGC 1 cut(s) 851
NcoI CCATGG 1 cut(s) 721
NdeI CATATG 1 cut(s) 466
NgoMIV GCCGGC 1 cut(s) 849
NlaIII CATG 5 cut(s) 19, 318, 725, 740, 992
NlaIV GGNNCC 6 cut(s) 719, 848, 881, 890, 1143, 1984
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 5 cut(s) 485, 571, 620, 661, 918
NspI RCATGY 1 cut(s) 19
OliI CACNNNNGTG 1 cut(s) 627
PaeR7I CTCGAG 1 cut(s) 1309
PciSI GCTCTTC 1 cut(s) 393
PcsI WCGNNNNNNNCGW 2 cut(s) 186, 540
PdiI GCCGGC 1 cut(s) 851
PdmI GAANNNNTTC 3 cut(s) 212, 869, 2017
PfeI GAWTC 6 cut(s) 186, 497, 548, 770, 998, 1883
PflMI CCANNNNNTGG 1 cut(s) 320
PfoI TCCNGGA 1 cut(s) 634
PkrI GCNGC 5 cut(s) 154, 855, 1812, 1867, 2026
PleI GAGTC 2 cut(s) 469, 1090
PpsI GAGTC 2 cut(s) 469, 1090
PshAI GACNNNNGTC 1 cut(s) 195
Psp6I CCWGG 2 cut(s) 634, 1832
PspFI CCCAGC 1 cut(s) 1577
PspGI CCWGG 2 cut(s) 634, 1832
PspN4I GGNNCC 6 cut(s) 719, 848, 881, 890, 1143, 1984
PspPI GGNCC 2 cut(s) 1420, 1753
PstI CTGCAG 1 cut(s) 2029
PsuI RGATCY 1 cut(s) 1982
PvuII CAGCTG 1 cut(s) 2024
RsaI GTAC 2 cut(s) 1497, 1552
RsaNI GTAC 2 cut(s) 1496, 1551
RseI CAYNNNNRTG 2 cut(s) 627, 789
SapI GCTCTTC 1 cut(s) 393
SaqAI TTAA 6 cut(s) 140, 162, 678, 708, 929, 1818
SatI GCNGC 5 cut(s) 153, 854, 1811, 1866, 2025
Sau96I GGNCC 2 cut(s) 1420, 1753
ScaI AGTACT 1 cut(s) 1497
SchI GAGTC 2 cut(s) 470, 1091
ScrFI CCNGG 2 cut(s) 636, 1834
SduI GDGCHC 3 cut(s) 265, 975, 1257
SfaNI GCATC 5 cut(s) 795, 816, 1323, 1347, 1415
SfcI CTRYAG 2 cut(s) 1248, 2025
Sfr274I CTCGAG 1 cut(s) 1309
SinI GGWCC 1 cut(s) 1753
SlaI CTCGAG 1 cut(s) 1309
SmiMI CAYNNNNRTG 2 cut(s) 627, 789
SmlI CTYRAG 3 cut(s) 809, 1309, 1358
SmoI CTYRAG 3 cut(s) 809, 1309, 1358
Sse9I AATT 6 cut(s) 136, 291, 352, 521, 1395, 1518
SsiI CCGC 3 cut(s) 152, 183, 853
SspMI CTAG 3 cut(s) 1574, 1793, 1944
StyD4I CCNGG 2 cut(s) 634, 1832
StyI CCWWGG 1 cut(s) 721
TaaI ACNGT 8 cut(s) 194, 446, 509, 754, 905, 1138, 1550, 1771
TaiI ACGT 8 cut(s) 36, 487, 531, 627, 668, 1239, 1981, 2005
TaqI TCGA 9 cut(s) 189, 253, 824, 1131, 1292, 1310, 1364, 1464, 1500
TasI AATT 6 cut(s) 136, 291, 352, 521, 1395, 1518
TatI WGTACW 2 cut(s) 1495, 1550
TauI GCSGC 2 cut(s) 155, 856
TfiI GAWTC 6 cut(s) 186, 497, 548, 770, 998, 1883
Tru1I TTAA 6 cut(s) 140, 162, 678, 708, 929, 1818
Tru9I TTAA 6 cut(s) 140, 162, 678, 708, 929, 1818
TscAI CASTG 7 cut(s) 411, 634, 780, 1067, 1152, 1462, 1560
TseFI GTSAC 5 cut(s) 485, 571, 620, 661, 918
TseI GCWGC 3 cut(s) 1810, 1865, 2024
Tsp45I GTSAC 5 cut(s) 485, 571, 620, 661, 918
TspGWI ACGGA 1 cut(s) 320
TspRI CASTG 7 cut(s) 411, 634, 780, 1067, 1152, 1462, 1560
Van91I CCANNNNNTGG 1 cut(s) 320
VneI GTGCAC 1 cut(s) 1253
VpaK11BI GGWCC 1 cut(s) 1753
XagI CCTNNNNNAGG 1 cut(s) 639
XapI RAATTY 3 cut(s) 352, 521, 1518
XceI RCATGY 1 cut(s) 19
XhoI CTCGAG 1 cut(s) 1309
XmnI GAANNNNTTC 3 cut(s) 212, 869, 2017
XspI CTAG 3 cut(s) 1574, 1793, 1944
ZraI GACGTC 1 cut(s) 666
ZrmI AGTACT 1 cut(s) 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.