RchiOBHm_Chr7g0238651

Leucine-rich repeats, typical (most populated) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0008810
Physical Location & Seq
Reverse (-)
64114911 .. 64118349
3439 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21385

Sequence Viewer

Length: 2037 bp
ATGGCAAAAATTAGTTGCTTCTCTCTAATTGTTAGGAAGAAGAAGAAGGTTAAGGGAGATGGTGAATCTGCAAAAGCAGGTGAAGTGGACAAGGCAATTAGGACCCTGCAACTCAGGCTTCAACAACAACCTGTGAAAACTGTGGAAGTTAATGGGTTGAAGCCTTTGAAATCTTTCGGAGCCTTTATCCCTTATGGTGTTGACAAGAAACCTATCAAGGACAAGGTGAAGAGTCCTGATAGCCTTATTGGGTTACGTGAAGCAGCCTATGAAGCTGAAGATGAGCATGGAGAGAGCCCCATCAACTCTAATGGCTCTGATCTTCAGGTCAGTGAAGCCAATGCGGGCGAAGAGGTCTCATTAAGGAAGATGGATTGCTGTGAATCTGATAAGGACTCTGGGAGGGGTGTGGATAGACTAGAAAGTGGGCATCTTAGTGATCCTGGGGTTGTGAAAGCAGAGTTTTGGGGTTCACGAAAGCTAACTCGGTCTTGCTCGAATTTGGAGACTCATAAGGTGGATGGAAAGATGCAGTCTAAGTTGCGTGCTTCGAAGACAGAGTCTTTTGAACAATTGCAGGAATTGGATGGAAGGGTAAGGAAGGATGTTAATCCTGGAAGCCCTGCTTCTGTGGGAAGCCATTTCAGTGCTGATAAGGTGATGCTCAAGAAGCATTCTTCAAGCCAAGTTTTGCCTTCTAGAAGCAGAAGATTGTGGTGGAAGTTGTTTCTTTGGAGCCATAGGAACCTGCACAAATCATCATCCACTGCAACACCAAAGCAACTTCCCTACAAAATTAAATTGAATATGCAAGGCGGGTACTCTTCGGATACGCTTGAACCAAACAGAGTTATGCAATTCGAAAAGATGGAATCACCTCTGTCCTTTAAATCTGTAGACAAAGGGAAGAACATCGTGAATGATGACCAGAGCTGGACCGGTTTTCAAATTAGATCCTCATCCTTATGGCCTCAGAACCAATGGGTTGCATTCTCAACAGAAGCATCCTCATCTTCGAGAGTGTTAGACTGGATGAAAGATCTCGACACAACACCCTCCTCACTTCTATCTAACGAAGATAAAGATGATGGAGTCGTCACTCCACAAACCCCACCCTCTCCTCAAACTCCTGGATCAAGAAGCTCAACTTACTTCACTCGAGGTCCCGATGCCAACCTTTCAGAGGATACATTGCATGCTAATACCGTAATCCAGACTCTAAACTCTTCGTCTACAGTGGCTCACATCTCTGGTATGGGCTTAAAAGCCATCCCCATCATTTCATGCTTCTGCAGCCTTCGATCCGTTAACTTGTCAAACAACTTCATAGTTCACATCACTCCAGGATCGCTGCCAAAGAGCCTTCACACACTTGATTTGTCCAAAAACAAGATCAGCTCCATTGAAGGACTGAGAGAATTAAGCCATTTGCGAGTACTAAACCTCAGTTACAATCGGATTTCTAGAATTGGACGCGGGTTATCAAGCTGTAGCATACTTAAGGAGCTCTATCTTGCTGGGAACAAGATCAGTGATGTTGAAGGTCTACACAGGCTATTGAAGCTAACAGTTCTGGACCTGAGCTTCAACAAGATAACAACAACAAAGGCACTTGGCCAGCTTGTTGCTAACTACAACTCGCTACAGGGTCTGAATCTATTAGGCAATCCGATCCAGAACAACATTGGCGATGAGCAGCTGCGCAAAACTATTATAAGTCTTCTCCCAAAGCTAGTCTTCCTGAACAAGCAAGCCATCAAGCCACCACGAGCAAGGGAAGCAGTTACAGATAGTGTAGCCAAAGCTGCATTAGGAAAATCCGGATGGAACCCTCGCAGAAAAACAGGTAAGAAGCTTACCCAAAGTGTCTCAGTTCCCAGAAAAAGGTCTGATTCCATATCACCAAAGAAAACTCGAACGTTTCCAAACCGCGGCCACAAGAGCTCTGCCATTGCAAGTGTTGGACACAAGAGAATGCTGAAGTCCAAGAGCGAAGCCAAAGAGTCATCAGCTGTGCTTCCTTCTTCATCCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001578 GO:0001889 GO:0001947 GO:0002009 GO:0003002 GO:0003007 GO:0003143 GO:0003341 GO:0003352 GO:0003356 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0005929 GO:0005930 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009987 GO:0016020 GO:0016043 GO:0016604 GO:0016607 GO:0022607 GO:0030030 GO:0030031 GO:0030323 GO:0030324 GO:0031016 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032838 GO:0032879 GO:0032886 GO:0034622 GO:0035050 GO:0035082 GO:0035239 GO:0035295 GO:0035469 GO:0036158 GO:0036159 GO:0042995 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044451 GO:0044458 GO:0044463 GO:0044464 GO:0044782 GO:0044877 GO:0048513 GO:0048562 GO:0048565 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0050789 GO:0050794 GO:0051270 GO:0055123 GO:0060271 GO:0060429 GO:0060541 GO:0060562 GO:0060632 GO:0060972 GO:0061008 GO:0061371 GO:0065003 GO:0065007 GO:0070013 GO:0070286 GO:0070840 GO:0070925 GO:0071840 GO:0071907 GO:0071910 GO:0071944 GO:0072359 GO:0097014 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_6 LRR_8

Protein Analysis

678

Amino Acids

74.6

Weight (kDa)

9.83

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 432 - 487 7.9e-10 Leucine rich repeat
LRR_4 PF12799 453 - 490 5.7e-08 Leucine Rich repeats (2 copies)
LRR_9 PF14580 454 - 538 5.1e-08 Leucine-rich repeat
LRR_8 PF13855 473 - 510 1.3e-06 Leucine rich repeat
LRR_4 PF12799 500 - 537 2.6e-07 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1715
AarI CACCTGC 1 cut(s) 68
Acc16I TGCGCA 1 cut(s) 1703
Acc36I ACCTGC 2 cut(s) 68, 756
AccI GTMKAC 3 cut(s) 897, 1232, 1546
AccII CGCG 2 cut(s) 1476, 1932
AccIII TCCGGA 1 cut(s) 1820
AciI CCGC 5 cut(s) 344, 816, 1476, 1930, 1932
AclI AACGTT 1 cut(s) 1919
AclWI GGATC 6 cut(s) 434, 948, 1141, 1296, 1354, 1666
AcoI YGGCCR 2 cut(s) 1615, 1933
AcsI RAATTY 1 cut(s) 499
AcuI CTGAAG 3 cut(s) 297, 308, 2000
AfaI GTAC 2 cut(s) 821, 1437
AfiI CCNNNNNNNGG 3 cut(s) 1183, 1884, 1931
AflII CTTAAG 1 cut(s) 1499
AgeI ACCGGT 1 cut(s) 938
AjnI CCWGG 4 cut(s) 442, 613, 1129, 1342
Alw21I GWGCWC 2 cut(s) 1509, 1946
Alw26I GTCTC 3 cut(s) 361, 500, 1873
AlwI GGATC 6 cut(s) 434, 948, 1141, 1296, 1354, 1666
AlwNI CAGNNNCTG 1 cut(s) 1651
Ama87I CYCGRG 1 cut(s) 1158
Aor13HI TCCGGA 1 cut(s) 1820
AoxI GGCC 3 cut(s) 968, 1615, 1933
ApeKI GCWGC 6 cut(s) 263, 1293, 1351, 1696, 1699, 1805
ApoI RAATTY 1 cut(s) 499
ArsI GACNNNNNNTTYG 2 cut(s) 545, 577
AsiGI ACCGGT 1 cut(s) 938
Asp700I GAANNNNTTC 1 cut(s) 173
AspLEI GCGC 1 cut(s) 1704
AspS9I GGNCC 4 cut(s) 102, 936, 1163, 1576
AsuHPI GGTGA 6 cut(s) 74, 92, 238, 670, 867, 1893
AsuII TTCGAA 2 cut(s) 551, 861
AvaI CYCGRG 1 cut(s) 1158
AvaII GGWCC 4 cut(s) 102, 936, 1163, 1576
BalI TGGCCA 1 cut(s) 1617
BanII GRGCYC 3 cut(s) 299, 1509, 1946
BauI CACGAG 1 cut(s) 1767
BbsI GAAGAC 3 cut(s) 560, 1712, 1729
Bbv12I GWGCWC 2 cut(s) 1509, 1946
BbvI GCAGC 6 cut(s) 275, 1305, 1338, 1686, 1708, 1792
BciT130I CCWGG 4 cut(s) 444, 615, 1131, 1344
BciVI GTATCC 2 cut(s) 823, 1180
BcoDI GTCTC 3 cut(s) 361, 500, 1873
BfaI CTAG 4 cut(s) 419, 699, 1464, 1733
BfmI CTRYAG 5 cut(s) 894, 1233, 1291, 1489, 1643
BfrI CTTAAG 1 cut(s) 1499
BfuAI ACCTGC 2 cut(s) 68, 756
BfuI GTATCC 2 cut(s) 823, 1180
BglII AGATCT 1 cut(s) 1039
BisI GCNGC 7 cut(s) 264, 1294, 1352, 1697, 1700, 1806, 1933
BlsI GCNGC 7 cut(s) 265, 1295, 1353, 1698, 1701, 1807, 1934
BmcAI AGTACT 1 cut(s) 1437
Bme1390I CCNGG 4 cut(s) 444, 615, 1131, 1344
Bme18I GGWCC 4 cut(s) 102, 936, 1163, 1576
BmeT110I CYCGRG 1 cut(s) 1158
BmgT120I GGNCC 4 cut(s) 102, 936, 1163, 1576
BmiI GGNNCC 6 cut(s) 104, 181, 737, 746, 1165, 1829
BmrFI CCNGG 4 cut(s) 444, 615, 1131, 1344
BmsI GCATC 5 cut(s) 439, 519, 651, 1013, 1159
BpiI GAAGAC 3 cut(s) 560, 1712, 1729
BpmI CTGGAG 1 cut(s) 1326
Bpu10I CCTNAGC 1 cut(s) 1580
Bpu14I TTCGAA 2 cut(s) 551, 861
BpuEI CTTGAG 1 cut(s) 650
BsaAI YACGTR 1 cut(s) 257
BsaBI GATNNNNATC 2 cut(s) 609, 958
BsaI GGTCTC 1 cut(s) 361
BsaJI CCNNGG 2 cut(s) 443, 1930
BsaWI WCCGGW 2 cut(s) 938, 1820
Bsc4I CCNNNNNNNGG 3 cut(s) 1183, 1884, 1931
Bse118I RCCGGY 1 cut(s) 938
Bse1I ACTGG 1 cut(s) 1034
Bse3DI GCAATG 2 cut(s) 1190, 1950
Bse8I GATNNNNATC 2 cut(s) 609, 958
BseAI TCCGGA 1 cut(s) 1820
BseBI CCWGG 4 cut(s) 444, 615, 1131, 1344
BseDI CCNNGG 2 cut(s) 443, 1930
BseJI GATNNNNATC 2 cut(s) 609, 958
BseLI CCNNNNNNNGG 3 cut(s) 1183, 1884, 1931
BseMI GCAATG 2 cut(s) 1190, 1950
BseMII CTCAG 6 cut(s) 127, 986, 1403, 1459, 1571, 1884
BseNI ACTGG 1 cut(s) 1034
BseRI GAGGAG 2 cut(s) 1048, 1110
BseXI GCAGC 6 cut(s) 275, 1305, 1338, 1686, 1708, 1792
BseYI CCCAGC 1 cut(s) 1517
BsgI GTGCAG 1 cut(s) 734
Bsh1236I CGCG 2 cut(s) 1476, 1932
BshFI GGCC 3 cut(s) 970, 1617, 1935
BshTI ACCGGT 1 cut(s) 938
BsiHKAI GWGCWC 2 cut(s) 1509, 1946
BsiHKCI CYCGRG 1 cut(s) 1158
BsiSI CCGG 2 cut(s) 939, 1821
BslFI GGGAC 1 cut(s) 1149
BslI CCNNNNNNNGG 3 cut(s) 1183, 1884, 1931
BsmAI GTCTC 3 cut(s) 361, 500, 1873
BsmFI GGGAC 1 cut(s) 1149
BsmI GAATGC 3 cut(s) 673, 989, 1980
BsnI GGCC 3 cut(s) 970, 1617, 1935
Bso31I GGTCTC 1 cut(s) 361
BsoBI CYCGRG 1 cut(s) 1158
Bsp119I TTCGAA 2 cut(s) 551, 861
Bsp1286I GDGCHC 3 cut(s) 299, 1509, 1946
Bsp13I TCCGGA 1 cut(s) 1820
BspACI CCGC 5 cut(s) 344, 816, 1476, 1930, 1932
BspANI GGCC 3 cut(s) 970, 1617, 1935
BspCNI CTCAG 6 cut(s) 126, 985, 1404, 1458, 1572, 1883
BspEI TCCGGA 1 cut(s) 1820
BspFNI CGCG 2 cut(s) 1476, 1932
BspLI GGNNCC 6 cut(s) 104, 181, 737, 746, 1165, 1829
BspMAI CTGCAG 1 cut(s) 1295
BspMI ACCTGC 2 cut(s) 68, 756
BspPI GGATC 6 cut(s) 434, 948, 1141, 1296, 1354, 1666
BspT104I TTCGAA 2 cut(s) 551, 861
BspTI CTTAAG 1 cut(s) 1499
BspTNI GGTCTC 1 cut(s) 361
BsrDI GCAATG 2 cut(s) 1190, 1950
BsrFI RCCGGY 1 cut(s) 938
BsrI ACTGG 1 cut(s) 1034
BssAI RCCGGY 1 cut(s) 938
BssECI CCNNGG 2 cut(s) 443, 1930
BssSI CACGAG 1 cut(s) 1767
Bst2BI CACGAG 1 cut(s) 1767
Bst2UI CCWGG 4 cut(s) 444, 615, 1131, 1344
Bst4CI ACNGT 4 cut(s) 142, 1207, 1237, 1570
Bst6I CTCTTC 4 cut(s) 224, 345, 829, 1231
BstAFI CTTAAG 1 cut(s) 1499
BstBAI YACGTR 1 cut(s) 257
BstBI TTCGAA 2 cut(s) 551, 861
BstC8I GCNNGC 5 cut(s) 346, 546, 1197, 1619, 1752
BstDEI CTNAG 8 cut(s) 113, 434, 537, 972, 1412, 1445, 1580, 1870
BstDSI CCRYGG 1 cut(s) 1930
BstENI CCTNNNNNAGG 1 cut(s) 1181
BstFNI CGCG 2 cut(s) 1476, 1932
BstHHI GCGC 1 cut(s) 1704
BstMAI GTCTC 3 cut(s) 361, 500, 1873
BstMWI GCNNNNNNNGC 8 cut(s) 115, 272, 670, 1293, 1561, 1778, 1805, 1941
BstNI CCWGG 4 cut(s) 444, 615, 1131, 1344
BstNSI RCATGY 1 cut(s) 1199
BstSCI CCNGG 4 cut(s) 442, 613, 1129, 1342
BstSFI CTRYAG 5 cut(s) 894, 1233, 1291, 1489, 1643
BstUI CGCG 2 cut(s) 1476, 1932
BstV1I GCAGC 6 cut(s) 275, 1305, 1338, 1686, 1708, 1792
BstV2I GAAGAC 3 cut(s) 560, 1712, 1729
BstX2I RGATCY 2 cut(s) 953, 1039
BstYI RGATCY 2 cut(s) 953, 1039
BsuI GTATCC 2 cut(s) 823, 1180
BsuRI GGCC 3 cut(s) 970, 1617, 1935
BtgI CCRYGG 1 cut(s) 1930
BtgZI GCGATG 1 cut(s) 1704
BtsI GCAGTG 1 cut(s) 765
BtsIMutI CAGTG 5 cut(s) 337, 652, 765, 1242, 1537
BveI ACCTGC 2 cut(s) 68, 756
Cac8I GCNNGC 5 cut(s) 346, 546, 1197, 1619, 1752
CaiI CAGNNNCTG 1 cut(s) 1651
CfoI GCGC 1 cut(s) 1704
Cfr10I RCCGGY 1 cut(s) 938
Cfr13I GGNCC 4 cut(s) 102, 936, 1163, 1576
Cfr42I CCGCGG 1 cut(s) 1933
CseI GACGC 1 cut(s) 1482
Csp6I GTAC 2 cut(s) 820, 1436
CspAI ACCGGT 1 cut(s) 938
CviAII CATG 3 cut(s) 287, 1196, 1284
CviQI GTAC 2 cut(s) 820, 1436
DdeI CTNAG 8 cut(s) 113, 434, 537, 972, 1412, 1445, 1580, 1870
DraI TTTAAA 1 cut(s) 889
EaeI YGGCCR 2 cut(s) 1615, 1933
Eam1104I CTCTTC 4 cut(s) 224, 345, 829, 1231
EarI CTCTTC 4 cut(s) 224, 345, 829, 1231
Ecl136II GAGCTC 2 cut(s) 1507, 1944
Eco24I GRGCYC 3 cut(s) 299, 1509, 1946
Eco31I GGTCTC 1 cut(s) 361
Eco47I GGWCC 4 cut(s) 102, 936, 1163, 1576
Eco53kI GAGCTC 2 cut(s) 1507, 1944
Eco57I CTGAAG 3 cut(s) 297, 308, 2000
Eco88I CYCGRG 1 cut(s) 1158
EcoICRI GAGCTC 2 cut(s) 1507, 1944
EcoNI CCTNNNNNAGG 1 cut(s) 1181
EcoO109I RGGNCCY 2 cut(s) 102, 1163
EcoRII CCWGG 4 cut(s) 442, 613, 1129, 1342
EcoT38I GRGCYC 3 cut(s) 299, 1509, 1946
FaeI CATG 3 cut(s) 290, 1199, 1287
FalI AAGNNNNNCTT 6 cut(s) 610, 642, 1132, 1164, 1721, 1753
FaqI GGGAC 1 cut(s) 1149
FatI CATG 3 cut(s) 286, 1195, 1283
FauI CCCGC 3 cut(s) 337, 809, 1469
FblI GTMKAC 3 cut(s) 897, 1232, 1546
Fnu4HI GCNGC 7 cut(s) 264, 1294, 1352, 1697, 1700, 1806, 1933
FriOI GRGCYC 3 cut(s) 299, 1509, 1946
Fsp4HI GCNGC 7 cut(s) 264, 1294, 1352, 1697, 1700, 1806, 1933
FspBI CTAG 4 cut(s) 419, 699, 1464, 1733
FspI TGCGCA 1 cut(s) 1703
GlaI GCGC 1 cut(s) 1703
GluI GCNGC 7 cut(s) 264, 1294, 1352, 1697, 1700, 1806, 1933
GsaI CCCAGC 1 cut(s) 1521
GsuI CTGGAG 1 cut(s) 1326
HaeIII GGCC 3 cut(s) 970, 1617, 1935
HapII CCGG 2 cut(s) 939, 1821
HgaI GACGC 1 cut(s) 1482
HhaI GCGC 1 cut(s) 1704
Hin1II CATG 3 cut(s) 290, 1199, 1287
Hin6I GCGC 1 cut(s) 1702
HinP1I GCGC 1 cut(s) 1702
HincII GTYRAC 2 cut(s) 202, 1309
HindII GTYRAC 2 cut(s) 202, 1309
HindIII AAGCTT 1 cut(s) 1853
HpaI GTTAAC 1 cut(s) 1309
HpaII CCGG 2 cut(s) 939, 1821
HphI GGTGA 6 cut(s) 74, 92, 238, 670, 867, 1893
Hpy166II GTNNAC 8 cut(s) 88, 202, 473, 898, 1233, 1309, 1333, 1547
Hpy8I GTNNAC 8 cut(s) 88, 202, 473, 898, 1233, 1309, 1333, 1547
HpyAV CCTTC 9 cut(s) 40, 585, 595, 705, 1307, 1373, 1400, 1535, 2031
HpyCH4III ACNGT 4 cut(s) 142, 1207, 1237, 1570
HpyCH4IV ACGT 2 cut(s) 256, 1919
HpyF10VI GCNNNNNNNGC 8 cut(s) 115, 272, 670, 1293, 1561, 1778, 1805, 1941
HpyF3I CTNAG 8 cut(s) 113, 434, 537, 972, 1412, 1445, 1580, 1870
HpySE526I ACGT 2 cut(s) 256, 1919
Hsp92II CATG 3 cut(s) 290, 1199, 1287
HspAI GCGC 1 cut(s) 1702
Kpn2I TCCGGA 1 cut(s) 1820
KspAI GTTAAC 1 cut(s) 1309
KspI CCGCGG 1 cut(s) 1933
LmnI GCTCC 4 cut(s) 179, 735, 1403, 1504
Lsp1109I GCAGC 6 cut(s) 275, 1305, 1338, 1686, 1708, 1792
LweI GCATC 5 cut(s) 439, 519, 651, 1013, 1159
MaeI CTAG 4 cut(s) 419, 699, 1464, 1733
MaeII ACGT 2 cut(s) 256, 1919
MaeIII GTNAC 4 cut(s) 252, 1096, 1448, 1783
MfeI CAATTG 1 cut(s) 572
MflI RGATCY 2 cut(s) 953, 1039
MhlI GDGCHC 3 cut(s) 299, 1509, 1946
MlsI TGGCCA 1 cut(s) 1617
MluNI TGGCCA 1 cut(s) 1617
MlyI GAGTC 7 cut(s) 241, 389, 502, 569, 1101, 1210, 2012
MmeI TCCRAC 1 cut(s) 1942
Mox20I TGGCCA 1 cut(s) 1617
MroI TCCGGA 1 cut(s) 1820
MroXI GAANNNNTTC 1 cut(s) 173
MscI TGGCCA 1 cut(s) 1617
MslI CAYNNNNRTG 3 cut(s) 435, 645, 964
Msp20I TGGCCA 1 cut(s) 1617
MspA1I CMGCKG 3 cut(s) 1699, 1932, 2012
MspCI CTTAAG 1 cut(s) 1499
MspI CCGG 2 cut(s) 939, 1821
MspR9I CCNGG 4 cut(s) 444, 615, 1131, 1344
MunI CAATTG 1 cut(s) 572
Mva1269I GAATGC 3 cut(s) 673, 989, 1980
MvaI CCWGG 4 cut(s) 444, 615, 1131, 1344
MvnI CGCG 2 cut(s) 1476, 1932
MwoI GCNNNNNNNGC 8 cut(s) 115, 272, 670, 1293, 1561, 1778, 1805, 1941
NlaIII CATG 3 cut(s) 290, 1199, 1287
NlaIV GGNNCC 6 cut(s) 104, 181, 737, 746, 1165, 1829
NmuCI GTSAC 1 cut(s) 1096
NsbI TGCGCA 1 cut(s) 1703
NspI RCATGY 1 cut(s) 1199
NspV TTCGAA 2 cut(s) 551, 861
PaeI GCATGC 1 cut(s) 1199
PaeR7I CTCGAG 1 cut(s) 1158
PaqCI CACCTGC 1 cut(s) 68
PctI GAATGC 3 cut(s) 673, 989, 1980
PdmI GAANNNNTTC 1 cut(s) 173
PfeI GAWTC 5 cut(s) 65, 383, 872, 1654, 1892
PflFI GACNNNGTC 1 cut(s) 559
PfoI TCCNGGA 3 cut(s) 613, 1129, 1342
PinAI ACCGGT 1 cut(s) 938
PkrI GCNGC 7 cut(s) 265, 1295, 1353, 1698, 1701, 1807, 1934
PleI GAGTC 7 cut(s) 240, 389, 502, 568, 1100, 1210, 2011
PpsI GAGTC 7 cut(s) 240, 389, 502, 568, 1100, 1210, 2011
Ppu21I YACGTR 1 cut(s) 257
PpuMI RGGWCCY 2 cut(s) 102, 1163
PsiI TTATAA 1 cut(s) 1715
Psp124BI GAGCTC 2 cut(s) 1509, 1946
Psp1406I AACGTT 1 cut(s) 1919
Psp5II RGGWCCY 2 cut(s) 102, 1163
Psp6I CCWGG 4 cut(s) 442, 613, 1129, 1342
PspFI CCCAGC 1 cut(s) 1517
PspGI CCWGG 4 cut(s) 442, 613, 1129, 1342
PspN4I GGNNCC 6 cut(s) 104, 181, 737, 746, 1165, 1829
PspPI GGNCC 4 cut(s) 102, 936, 1163, 1576
PspPPI RGGWCCY 2 cut(s) 102, 1163
PspXI VCTCGAGB 1 cut(s) 1158
PstI CTGCAG 1 cut(s) 1295
PstNI CAGNNNCTG 1 cut(s) 1651
PsuI RGATCY 2 cut(s) 953, 1039
PsyI GACNNNGTC 1 cut(s) 559
PvuII CAGCTG 2 cut(s) 1699, 2012
RsaI GTAC 2 cut(s) 821, 1437
RsaNI GTAC 2 cut(s) 820, 1436
RseI CAYNNNNRTG 3 cut(s) 435, 645, 964
SacI GAGCTC 2 cut(s) 1509, 1946
SacII CCGCGG 1 cut(s) 1933
SatI GCNGC 7 cut(s) 264, 1294, 1352, 1697, 1700, 1806, 1933
Sau96I GGNCC 4 cut(s) 102, 936, 1163, 1576
ScaI AGTACT 1 cut(s) 1437
SchI GAGTC 7 cut(s) 241, 389, 502, 569, 1101, 1210, 2012
ScrFI CCNGG 4 cut(s) 444, 615, 1131, 1344
SduI GDGCHC 3 cut(s) 299, 1509, 1946
SfaNI GCATC 5 cut(s) 439, 519, 651, 1013, 1159
SfcI CTRYAG 5 cut(s) 894, 1233, 1291, 1489, 1643
Sfr274I CTCGAG 1 cut(s) 1158
Sfr303I CCGCGG 1 cut(s) 1933
SfuI TTCGAA 2 cut(s) 551, 861
SgrBI CCGCGG 1 cut(s) 1933
SinI GGWCC 4 cut(s) 102, 936, 1163, 1576
SlaI CTCGAG 1 cut(s) 1158
SmiMI CAYNNNNRTG 3 cut(s) 435, 645, 964
SmlI CTYRAG 3 cut(s) 665, 1158, 1499
SmoI CTYRAG 3 cut(s) 665, 1158, 1499
SphI GCATGC 1 cut(s) 1199
SsiI CCGC 5 cut(s) 344, 816, 1476, 1930, 1932
SspMI CTAG 4 cut(s) 419, 699, 1464, 1733
SstI GAGCTC 2 cut(s) 1509, 1946
StyD4I CCNGG 4 cut(s) 442, 613, 1129, 1342
TaaI ACNGT 4 cut(s) 142, 1207, 1237, 1570
TaiI ACGT 2 cut(s) 259, 1922
TaqI TCGA 8 cut(s) 497, 551, 861, 1016, 1044, 1159, 1300, 1915
TaqII GACCGA 1 cut(s) 477
TatI WGTACW 1 cut(s) 1435
TauI GCSGC 1 cut(s) 1935
TfiI GAWTC 5 cut(s) 65, 383, 872, 1654, 1892
TscAI CASTG 5 cut(s) 337, 652, 772, 1242, 1537
TseFI GTSAC 1 cut(s) 1096
TseI GCWGC 6 cut(s) 263, 1293, 1351, 1696, 1699, 1805
Tsp45I GTSAC 1 cut(s) 1096
TspDTI ATGAA 5 cut(s) 285, 1049, 1272, 1315, 2016
TspGWI ACGGA 1 cut(s) 1294
TspRI CASTG 5 cut(s) 337, 652, 772, 1242, 1537
Tth111I GACNNNGTC 1 cut(s) 559
Vha464I CTTAAG 1 cut(s) 1499
VpaK11BI GGWCC 4 cut(s) 102, 936, 1163, 1576
XagI CCTNNNNNAGG 1 cut(s) 1181
XapI RAATTY 1 cut(s) 499
XbaI TCTAGA 2 cut(s) 698, 1463
XceI RCATGY 1 cut(s) 1199
XcmI CCANNNNNNNNNTGG 1 cut(s) 1682
XhoI CTCGAG 1 cut(s) 1158
XmiI GTMKAC 3 cut(s) 897, 1232, 1546
XmnI GAANNNNTTC 1 cut(s) 173
XspI CTAG 4 cut(s) 419, 699, 1464, 1733
ZrmI AGTACT 1 cut(s) 1437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.