Rw7G039820

Leucine-rich repeats, typical (most populated) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0008810
Physical Location & Seq
Reverse (-)
61480561 .. 61484221
3661 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G039820.1

Sequence Viewer

Length: 1668 bp
ATGGATTGCTGTGAATCTGATAAGGACTCTGGGAGGGGTGTGGATAGACTAGAAAGTGGGCATCTTAGTGATCCTGGGGTTGTGAAAGCAGAGTTTTGGGGTTCACGAAAGCTAACTCGGTCTTGCTCGAATTTGGAGACTCATAAGGTGGATGGAAAGATGCAGTCTAAGTTGCGTGTTTCAAAGACACAGTCTTTTGAACAATTGCAGGAATTGGATGGAAGTGTAAGGAAGGATGTTAATCCTGGAAGCCCTGCTTCTGTGGGAAGCCATTTCAGTGCTGATAAGGTGATGCTCAAGAAGCATTCTTCAAGCCAAGTTTTGCCTTCTAGAAGCAGAAGATTGTGGTGGAAGTTGTTTCTTTGGAGCCATAGGAACCTGCACAAATCATCATCCACTGCAACACCAAAGAAACTTCCCAACAAAATTAAATTGAATATGCAAGGCGGGTACTCTTCGGATACGCTTGAACCAAACAGAGTTATGCAATTCGAAAAGATGGAATCACCTCTGTCAACTAAATCTGTAGACAAAGGGAAGAACATCGTGAATGATGACCAGAGCTGGACTGGTTTTCAAATTAGATCCTCATCCTTATGGCCTCAGAACCAATGGGTTGCATTCTCAACAGAAGCATCCTCATCTTCGAGAGTGTTAGACTGGATGAAAGATCTCGACACAACACCCTCCTCACTTCCATCTAACGAAGATAAAGATGATGGAGTCGTCACTCCACAAACCCCACCCTCTCCTCAAACTCCTGGATCAAGAAGCACAACTTACTTCACTCGGGGTCCTGATGCCAACCTTTCAGAGGATACATTGCATGCTAATACCGTAATCCAGACTCTAAACTCTTCGTCAACAGTGGCTCACATCTCTGGTATGGGCTTAAAAGCCATCCCCATCATTTCATGCTTCTGCAGCCTTCGATCCGTTAACTTGTCAAACAACTTCATAGTTCACATCACTCCAGGATCGCTGCCAAAGAGCCTTCACACACTTGATTTGTCCAAAAACAAGATCAGCTCCATTGAAGGACTGAGAGAATTAAGCCATTTGCGAGTACTAAACCTCAGTTACAATCGGATTTCTAGAATTGGACGCGGGTTATCAAGCTGTAGCATACTTAAGGAGCTCTATCTTGCTGGGAACAAGATCAGTGATGTTGAAGGTCTACACAGGCTATTGAAGCTAACAGTTTTGGACCTGAGCTTCAACAAGATAACAACAACAAAGGCACTTGGCCAGCTTGTTGCTAACTACAACTCGCTACAGGGTCTGAATCTATTAGGCAATCCGATCCAGAACAACATTGGCGATGAGCAGCTGCGCAAAACTATTACAAGTCTTCTCCCAAAGCTAGTCTTCCTGAACAAGCAAGCCATCAAGCCACCACGAGCGAGGGAAGCAGTTACAGATAGTGTAGCCAAAGCTGCATTAGGAAAATCCGGATGGAACCCTCGCCGAAAAACAGGTAAGAAGCTTACCCAAAGTGTCTCATTTCCCAGAAAAAGGTCTGATTCCATATCACCAAAGAAAACTCGAACATTTCCAAACCGCGGCCACAAGAGCTCTGCCATTGCAAGTGTTGGACACAAGAGAATGCTGAAGTCCAAGAGCGAAGCCAAAGAGTCATCAGCTGTGCTTCCTTCTTCATCCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001578 GO:0001889 GO:0001947 GO:0002009 GO:0003002 GO:0003007 GO:0003143 GO:0003341 GO:0003352 GO:0003356 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0005929 GO:0005930 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009987 GO:0016020 GO:0016043 GO:0016604 GO:0016607 GO:0022607 GO:0030030 GO:0030031 GO:0030323 GO:0030324 GO:0031016 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032838 GO:0032879 GO:0032886 GO:0034622 GO:0035050 GO:0035082 GO:0035239 GO:0035295 GO:0035469 GO:0036158 GO:0036159 GO:0042995 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044451 GO:0044458 GO:0044463 GO:0044464 GO:0044782 GO:0044877 GO:0048513 GO:0048562 GO:0048565 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0050789 GO:0050794 GO:0051270 GO:0055123 GO:0060271 GO:0060429 GO:0060541 GO:0060562 GO:0060632 GO:0060972 GO:0061008 GO:0061371 GO:0065003 GO:0065007 GO:0070013 GO:0070286 GO:0070840 GO:0070925 GO:0071840 GO:0071907 GO:0071910 GO:0071944 GO:0072359 GO:0097014 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_6 LRR_8

Protein Analysis

555

Amino Acids

61.13

Weight (kDa)

10.01

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 309 - 364 5.6e-10 Leucine rich repeat
LRR_4 PF12799 330 - 367 4.4e-08 Leucine Rich repeats (2 copies)
LRR_9 PF14580 331 - 415 4.1e-08 Leucine-rich repeat
LRR_8 PF13855 350 - 387 1e-06 Leucine rich repeat
LRR_4 PF12799 377 - 414 2.1e-07 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1334
Acc36I ACCTGC 1 cut(s) 387
AccI GTMKAC 2 cut(s) 528, 1177
AccII CGCG 2 cut(s) 1107, 1563
AccIII TCCGGA 1 cut(s) 1451
AciI CCGC 4 cut(s) 447, 1107, 1561, 1563
AclWI GGATC 6 cut(s) 65, 579, 772, 927, 985, 1297
AcoI YGGCCR 2 cut(s) 1246, 1564
AcsI RAATTY 1 cut(s) 130
AcuI CTGAAG 1 cut(s) 1631
AfaI GTAC 2 cut(s) 452, 1068
AfiI CCNNNNNNNGG 3 cut(s) 814, 1515, 1562
AflII CTTAAG 1 cut(s) 1130
AjnI CCWGG 4 cut(s) 73, 244, 760, 973
Alw21I GWGCWC 2 cut(s) 1140, 1577
Alw26I GTCTC 2 cut(s) 131, 1504
AlwI GGATC 6 cut(s) 65, 579, 772, 927, 985, 1297
AlwNI CAGNNNCTG 1 cut(s) 1282
Ama87I CYCGRG 1 cut(s) 789
Aor13HI TCCGGA 1 cut(s) 1451
AoxI GGCC 3 cut(s) 599, 1246, 1564
ApeKI GCWGC 5 cut(s) 924, 982, 1327, 1330, 1436
ApoI RAATTY 1 cut(s) 130
ArsI GACNNNNNNTTYG 2 cut(s) 176, 208
AspLEI GCGC 1 cut(s) 1335
AspS9I GGNCC 2 cut(s) 794, 1207
AsuHPI GGTGA 3 cut(s) 301, 498, 1524
AsuII TTCGAA 1 cut(s) 492
AvaI CYCGRG 1 cut(s) 789
AvaII GGWCC 2 cut(s) 794, 1207
BalI TGGCCA 1 cut(s) 1248
BanII GRGCYC 2 cut(s) 1140, 1577
BauI CACGAG 1 cut(s) 1398
BbsI GAAGAC 2 cut(s) 1343, 1360
Bbv12I GWGCWC 2 cut(s) 1140, 1577
BbvI GCAGC 5 cut(s) 936, 969, 1317, 1339, 1423
BccI CCATC 9 cut(s) 146, 212, 493, 706, 713, 908, 914, 1394, 1449
BciT130I CCWGG 4 cut(s) 75, 246, 762, 975
BciVI GTATCC 2 cut(s) 454, 811
BcoDI GTCTC 2 cut(s) 131, 1504
BfaI CTAG 4 cut(s) 50, 330, 1095, 1364
BfmI CTRYAG 4 cut(s) 525, 922, 1120, 1274
BfrI CTTAAG 1 cut(s) 1130
BfuAI ACCTGC 1 cut(s) 387
BfuI GTATCC 2 cut(s) 454, 811
BglII AGATCT 1 cut(s) 670
BisI GCNGC 6 cut(s) 925, 983, 1328, 1331, 1437, 1564
BlsI GCNGC 6 cut(s) 926, 984, 1329, 1332, 1438, 1565
BmcAI AGTACT 1 cut(s) 1068
Bme1390I CCNGG 4 cut(s) 75, 246, 762, 975
Bme18I GGWCC 2 cut(s) 794, 1207
BmeT110I CYCGRG 1 cut(s) 789
BmgT120I GGNCC 2 cut(s) 794, 1207
BmiI GGNNCC 4 cut(s) 368, 377, 795, 1460
BmrFI CCNGG 4 cut(s) 75, 246, 762, 975
BmsI GCATC 5 cut(s) 70, 150, 282, 644, 790
BpiI GAAGAC 2 cut(s) 1343, 1360
BpmI CTGGAG 1 cut(s) 957
Bpu10I CCTNAGC 1 cut(s) 1211
Bpu14I TTCGAA 1 cut(s) 492
BpuEI CTTGAG 1 cut(s) 281
BsaBI GATNNNNATC 2 cut(s) 240, 589
BsaJI CCNNGG 2 cut(s) 74, 1561
BsaWI WCCGGW 1 cut(s) 1451
Bsc4I CCNNNNNNNGG 3 cut(s) 814, 1515, 1562
Bse1I ACTGG 2 cut(s) 574, 665
Bse3DI GCAATG 2 cut(s) 821, 1581
Bse8I GATNNNNATC 2 cut(s) 240, 589
BseAI TCCGGA 1 cut(s) 1451
BseBI CCWGG 4 cut(s) 75, 246, 762, 975
BseDI CCNNGG 2 cut(s) 74, 1561
BseJI GATNNNNATC 2 cut(s) 240, 589
BseLI CCNNNNNNNGG 3 cut(s) 814, 1515, 1562
BseMI GCAATG 2 cut(s) 821, 1581
BseMII CTCAG 4 cut(s) 617, 1034, 1090, 1202
BseNI ACTGG 2 cut(s) 574, 665
BseRI GAGGAG 2 cut(s) 679, 741
BseXI GCAGC 5 cut(s) 936, 969, 1317, 1339, 1423
BseYI CCCAGC 1 cut(s) 1148
BsgI GTGCAG 1 cut(s) 365
Bsh1236I CGCG 2 cut(s) 1107, 1563
BshFI GGCC 3 cut(s) 601, 1248, 1566
BsiHKAI GWGCWC 2 cut(s) 1140, 1577
BsiHKCI CYCGRG 1 cut(s) 789
BsiSI CCGG 1 cut(s) 1452
BslI CCNNNNNNNGG 3 cut(s) 814, 1515, 1562
BsmAI GTCTC 2 cut(s) 131, 1504
BsmI GAATGC 3 cut(s) 304, 620, 1611
BsnI GGCC 3 cut(s) 601, 1248, 1566
BsoBI CYCGRG 1 cut(s) 789
Bsp119I TTCGAA 1 cut(s) 492
Bsp1286I GDGCHC 2 cut(s) 1140, 1577
Bsp13I TCCGGA 1 cut(s) 1451
Bsp143I GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
BspACI CCGC 4 cut(s) 447, 1107, 1561, 1563
BspANI GGCC 3 cut(s) 601, 1248, 1566
BspCNI CTCAG 4 cut(s) 616, 1035, 1089, 1203
BspEI TCCGGA 1 cut(s) 1451
BspFNI CGCG 2 cut(s) 1107, 1563
BspLI GGNNCC 4 cut(s) 368, 377, 795, 1460
BspMAI CTGCAG 1 cut(s) 926
BspMI ACCTGC 1 cut(s) 387
BspPI GGATC 6 cut(s) 65, 579, 772, 927, 985, 1297
BspT104I TTCGAA 1 cut(s) 492
BspTI CTTAAG 1 cut(s) 1130
BsrDI GCAATG 2 cut(s) 821, 1581
BsrI ACTGG 2 cut(s) 574, 665
BssECI CCNNGG 2 cut(s) 74, 1561
BssMI GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
BssSI CACGAG 1 cut(s) 1398
Bst2BI CACGAG 1 cut(s) 1398
Bst2UI CCWGG 4 cut(s) 75, 246, 762, 975
Bst4CI ACNGT 4 cut(s) 192, 838, 868, 1201
Bst6I CTCTTC 2 cut(s) 460, 862
BstAFI CTTAAG 1 cut(s) 1130
BstBI TTCGAA 1 cut(s) 492
BstC8I GCNNGC 3 cut(s) 828, 1250, 1383
BstDEI CTNAG 6 cut(s) 65, 168, 603, 1043, 1076, 1211
BstDSI CCRYGG 1 cut(s) 1561
BstENI CCTNNNNNAGG 1 cut(s) 812
BstFNI CGCG 2 cut(s) 1107, 1563
BstHHI GCGC 1 cut(s) 1335
BstKTI GATC 9 cut(s) 73, 587, 673, 767, 935, 980, 1026, 1161, 1305
BstMAI GTCTC 2 cut(s) 131, 1504
BstMBI GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
BstMWI GCNNNNNNNGC 6 cut(s) 301, 924, 1192, 1409, 1436, 1572
BstNI CCWGG 4 cut(s) 75, 246, 762, 975
BstNSI RCATGY 1 cut(s) 830
BstSCI CCNGG 4 cut(s) 73, 244, 760, 973
BstSFI CTRYAG 4 cut(s) 525, 922, 1120, 1274
BstUI CGCG 2 cut(s) 1107, 1563
BstV1I GCAGC 5 cut(s) 936, 969, 1317, 1339, 1423
BstV2I GAAGAC 2 cut(s) 1343, 1360
BstX2I RGATCY 2 cut(s) 584, 670
BstYI RGATCY 2 cut(s) 584, 670
BsuI GTATCC 2 cut(s) 454, 811
BsuRI GGCC 3 cut(s) 601, 1248, 1566
BtgI CCRYGG 1 cut(s) 1561
BtgZI GCGATG 1 cut(s) 1335
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 4 cut(s) 283, 396, 873, 1168
BveI ACCTGC 1 cut(s) 387
Cac8I GCNNGC 3 cut(s) 828, 1250, 1383
CaiI CAGNNNCTG 1 cut(s) 1282
CfoI GCGC 1 cut(s) 1335
Cfr13I GGNCC 2 cut(s) 794, 1207
Cfr42I CCGCGG 1 cut(s) 1564
CseI GACGC 1 cut(s) 1113
Csp6I GTAC 2 cut(s) 451, 1067
CviAII CATG 2 cut(s) 827, 915
CviQI GTAC 2 cut(s) 451, 1067
DdeI CTNAG 6 cut(s) 65, 168, 603, 1043, 1076, 1211
DpnI GATC 9 cut(s) 72, 586, 672, 766, 934, 979, 1025, 1160, 1304
DpnII GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
EaeI YGGCCR 2 cut(s) 1246, 1564
Eam1104I CTCTTC 2 cut(s) 460, 862
EarI CTCTTC 2 cut(s) 460, 862
Ecl136II GAGCTC 2 cut(s) 1138, 1575
Eco24I GRGCYC 2 cut(s) 1140, 1577
Eco47I GGWCC 2 cut(s) 794, 1207
Eco53kI GAGCTC 2 cut(s) 1138, 1575
Eco57I CTGAAG 1 cut(s) 1631
Eco88I CYCGRG 1 cut(s) 789
EcoICRI GAGCTC 2 cut(s) 1138, 1575
EcoNI CCTNNNNNAGG 1 cut(s) 812
EcoO109I RGGNCCY 1 cut(s) 794
EcoRII CCWGG 4 cut(s) 73, 244, 760, 973
EcoT38I GRGCYC 2 cut(s) 1140, 1577
FaeI CATG 2 cut(s) 830, 918
FalI AAGNNNNNCTT 6 cut(s) 241, 273, 763, 795, 1352, 1384
FatI CATG 2 cut(s) 826, 914
FauI CCCGC 2 cut(s) 440, 1100
FblI GTMKAC 2 cut(s) 528, 1177
Fnu4HI GCNGC 6 cut(s) 925, 983, 1328, 1331, 1437, 1564
FriOI GRGCYC 2 cut(s) 1140, 1577
Fsp4HI GCNGC 6 cut(s) 925, 983, 1328, 1331, 1437, 1564
FspBI CTAG 4 cut(s) 50, 330, 1095, 1364
FspI TGCGCA 1 cut(s) 1334
GlaI GCGC 1 cut(s) 1334
GluI GCNGC 6 cut(s) 925, 983, 1328, 1331, 1437, 1564
GsaI CCCAGC 1 cut(s) 1152
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 3 cut(s) 601, 1248, 1566
HapII CCGG 1 cut(s) 1452
HgaI GACGC 1 cut(s) 1113
HhaI GCGC 1 cut(s) 1335
Hin1II CATG 2 cut(s) 830, 918
Hin6I GCGC 1 cut(s) 1333
HinP1I GCGC 1 cut(s) 1333
HincII GTYRAC 3 cut(s) 516, 864, 940
HindII GTYRAC 3 cut(s) 516, 864, 940
HindIII AAGCTT 1 cut(s) 1484
HinfI GANTC 9 cut(s) 14, 26, 139, 503, 723, 847, 1285, 1523, 1634
HpaI GTTAAC 1 cut(s) 940
HpaII CCGG 1 cut(s) 1452
HphI GGTGA 3 cut(s) 301, 498, 1524
Hpy166II GTNNAC 7 cut(s) 104, 516, 529, 864, 940, 964, 1178
Hpy188I TCNGA 8 cut(s) 19, 460, 606, 814, 1089, 1284, 1302, 1522
Hpy8I GTNNAC 7 cut(s) 104, 516, 529, 864, 940, 964, 1178
HpyAV CCTTC 7 cut(s) 226, 336, 938, 1004, 1031, 1166, 1662
HpyCH4III ACNGT 4 cut(s) 192, 838, 868, 1201
HpyF10VI GCNNNNNNNGC 6 cut(s) 301, 924, 1192, 1409, 1436, 1572
HpyF3I CTNAG 6 cut(s) 65, 168, 603, 1043, 1076, 1211
Hsp92II CATG 2 cut(s) 830, 918
HspAI GCGC 1 cut(s) 1333
Kpn2I TCCGGA 1 cut(s) 1451
KspAI GTTAAC 1 cut(s) 940
KspI CCGCGG 1 cut(s) 1564
Kzo9I GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
LmnI GCTCC 3 cut(s) 366, 1034, 1135
Lsp1109I GCAGC 5 cut(s) 936, 969, 1317, 1339, 1423
LweI GCATC 5 cut(s) 70, 150, 282, 644, 790
MaeI CTAG 4 cut(s) 50, 330, 1095, 1364
MaeIII GTNAC 3 cut(s) 727, 1079, 1414
MalI GATC 9 cut(s) 72, 586, 672, 766, 934, 979, 1025, 1160, 1304
MboI GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
MfeI CAATTG 1 cut(s) 203
MflI RGATCY 2 cut(s) 584, 670
MhlI GDGCHC 2 cut(s) 1140, 1577
MlsI TGGCCA 1 cut(s) 1248
MluCI AATT 9 cut(s) 130, 203, 212, 426, 431, 488, 579, 1049, 1098
MluNI TGGCCA 1 cut(s) 1248
MlyI GAGTC 5 cut(s) 20, 133, 732, 841, 1643
MmeI TCCRAC 1 cut(s) 1573
Mox20I TGGCCA 1 cut(s) 1248
MroI TCCGGA 1 cut(s) 1451
MscI TGGCCA 1 cut(s) 1248
MseI TTAA 6 cut(s) 240, 429, 893, 939, 1052, 1131
MslI CAYNNNNRTG 3 cut(s) 66, 276, 595
Msp20I TGGCCA 1 cut(s) 1248
MspA1I CMGCKG 3 cut(s) 1330, 1563, 1643
MspCI CTTAAG 1 cut(s) 1130
MspI CCGG 1 cut(s) 1452
MspR9I CCNGG 4 cut(s) 75, 246, 762, 975
MunI CAATTG 1 cut(s) 203
Mva1269I GAATGC 3 cut(s) 304, 620, 1611
MvaI CCWGG 4 cut(s) 75, 246, 762, 975
MvnI CGCG 2 cut(s) 1107, 1563
MwoI GCNNNNNNNGC 6 cut(s) 301, 924, 1192, 1409, 1436, 1572
NdeII GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
NlaIII CATG 2 cut(s) 830, 918
NlaIV GGNNCC 4 cut(s) 368, 377, 795, 1460
NmuCI GTSAC 1 cut(s) 727
NsbI TGCGCA 1 cut(s) 1334
NspI RCATGY 1 cut(s) 830
NspV TTCGAA 1 cut(s) 492
PaeI GCATGC 1 cut(s) 830
PctI GAATGC 3 cut(s) 304, 620, 1611
PfeI GAWTC 4 cut(s) 14, 503, 1285, 1523
PflFI GACNNNGTC 1 cut(s) 190
PfoI TCCNGGA 3 cut(s) 244, 760, 973
PkrI GCNGC 6 cut(s) 926, 984, 1329, 1332, 1438, 1565
PleI GAGTC 5 cut(s) 20, 133, 731, 841, 1642
PpsI GAGTC 5 cut(s) 20, 133, 731, 841, 1642
PpuMI RGGWCCY 1 cut(s) 794
Psp124BI GAGCTC 2 cut(s) 1140, 1577
Psp5II RGGWCCY 1 cut(s) 794
Psp6I CCWGG 4 cut(s) 73, 244, 760, 973
PspFI CCCAGC 1 cut(s) 1148
PspGI CCWGG 4 cut(s) 73, 244, 760, 973
PspN4I GGNNCC 4 cut(s) 368, 377, 795, 1460
PspPI GGNCC 2 cut(s) 794, 1207
PspPPI RGGWCCY 1 cut(s) 794
PstI CTGCAG 1 cut(s) 926
PstNI CAGNNNCTG 1 cut(s) 1282
PsuI RGATCY 2 cut(s) 584, 670
PsyI GACNNNGTC 1 cut(s) 190
PvuII CAGCTG 2 cut(s) 1330, 1643
RsaI GTAC 2 cut(s) 452, 1068
RsaNI GTAC 2 cut(s) 451, 1067
RseI CAYNNNNRTG 3 cut(s) 66, 276, 595
SacI GAGCTC 2 cut(s) 1140, 1577
SacII CCGCGG 1 cut(s) 1564
SaqAI TTAA 6 cut(s) 240, 429, 893, 939, 1052, 1131
SatI GCNGC 6 cut(s) 925, 983, 1328, 1331, 1437, 1564
Sau3AI GATC 9 cut(s) 70, 584, 670, 764, 932, 977, 1023, 1158, 1302
Sau96I GGNCC 2 cut(s) 794, 1207
ScaI AGTACT 1 cut(s) 1068
SchI GAGTC 5 cut(s) 20, 133, 732, 841, 1643
ScrFI CCNGG 4 cut(s) 75, 246, 762, 975
SduI GDGCHC 2 cut(s) 1140, 1577
SfaNI GCATC 5 cut(s) 70, 150, 282, 644, 790
SfcI CTRYAG 4 cut(s) 525, 922, 1120, 1274
Sfr303I CCGCGG 1 cut(s) 1564
SfuI TTCGAA 1 cut(s) 492
SgrBI CCGCGG 1 cut(s) 1564
SinI GGWCC 2 cut(s) 794, 1207
SmiMI CAYNNNNRTG 3 cut(s) 66, 276, 595
SmlI CTYRAG 2 cut(s) 296, 1130
SmoI CTYRAG 2 cut(s) 296, 1130
SphI GCATGC 1 cut(s) 830
Sse9I AATT 9 cut(s) 130, 203, 212, 426, 431, 488, 579, 1049, 1098
SsiI CCGC 4 cut(s) 447, 1107, 1561, 1563
SspMI CTAG 4 cut(s) 50, 330, 1095, 1364
SstI GAGCTC 2 cut(s) 1140, 1577
StyD4I CCNGG 4 cut(s) 73, 244, 760, 973
TaaI ACNGT 4 cut(s) 192, 838, 868, 1201
TaqI TCGA 6 cut(s) 128, 492, 647, 675, 931, 1546
TaqII GACCGA 1 cut(s) 108
TasI AATT 9 cut(s) 130, 203, 212, 426, 431, 488, 579, 1049, 1098
TatI WGTACW 1 cut(s) 1066
TauI GCSGC 1 cut(s) 1566
TfiI GAWTC 4 cut(s) 14, 503, 1285, 1523
Tru1I TTAA 6 cut(s) 240, 429, 893, 939, 1052, 1131
Tru9I TTAA 6 cut(s) 240, 429, 893, 939, 1052, 1131
TscAI CASTG 4 cut(s) 283, 403, 873, 1168
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 5 cut(s) 924, 982, 1327, 1330, 1436
Tsp45I GTSAC 1 cut(s) 727
TspDTI ATGAA 4 cut(s) 680, 903, 946, 1647
TspGWI ACGGA 1 cut(s) 925
TspRI CASTG 4 cut(s) 283, 403, 873, 1168
Tth111I GACNNNGTC 1 cut(s) 190
Vha464I CTTAAG 1 cut(s) 1130
VpaK11BI GGWCC 2 cut(s) 794, 1207
XagI CCTNNNNNAGG 1 cut(s) 812
XapI RAATTY 1 cut(s) 130
XbaI TCTAGA 2 cut(s) 329, 1094
XceI RCATGY 1 cut(s) 830
XcmI CCANNNNNNNNNTGG 2 cut(s) 566, 1313
XmiI GTMKAC 2 cut(s) 528, 1177
XspI CTAG 4 cut(s) 50, 330, 1095, 1364
ZrmI AGTACT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.