MD00G1009800.v1.1

Leucine-rich repeats, typical (most populated) subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0008810
Physical Location & Seq
Forward (+)
1218101 .. 1221961
3861 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1009800.v1.1.491

Sequence Viewer

Length: 1989 bp
ATGGCAAAATTCAGTTGCTTTTCTTTAATTGGTAGGAGGAAGAAGAAGGTTAAGGGAGATGATGAATCTACAAGAAGTGGTCAAGTGGACAAGGCAATTAGAACCCTGCAAGTCAGGTTTCAACAGCAGCCTCCGCAACCGTTGGAGATTGATGGGAAATCGAAGCCGGCAACTTTCGGAGTCCAAATACCTTATGGTGTTGAGAACAAGTACTCTTCCCCTCCGAGTGGCAATACAAGGAGCCCGAAAAGTCCTATCCGGTGCATTGAAGCAGCAGAAGCAGCGGCTTGTGAAGGGGAATATGAGCACAAAGAGAGCCCCTTAGCCAAGGGAACCTTCTCTAATGATCACTCTGATCTGCAACCCAACGAAGCCAATTCAGGTGACGTGACTCCATCAAGGAAGTTGGATTTATCCGAACCTGATTCGAGCTCTCAAGGGGTTCAAAGCGGGCATCTTAGTGATCCCGGGGTTGGTAAGGCCGAGTTTTGGGCATCACCAAAGCTTACCAGATCATGCTCTAATTTGGAGACTCATAAGAAAATGGTTAAAAAGATGTCCTCTAAGATGCCTGCTTCCAAGTCTCTGTCTCTCAAAGAACTGCCGGAAATGGCTGATAGTGTGAGGAAGGATGTTGATCCAGGCAGCCCTAGTTGTGTGTCAAGCCACTACAGTGCTGATAGAGTGATGCTGAAGAAGCATTCTTCAAGCCAAGTTCTGCCTTCTCGAAGTCGAAAATTGTGGTGGAAGTTGTTCCTTTGGAGCCACAGGAACCTGCACATAACACGGGATGCAAAACCAAAGACACTTGGTCCCGTTTCAGTGAACAAGCAAGGAGGATACTCTTCAGACACACTTGAACCAAATCGAGCTATGCAGTTTGGCAAGACGGAATCACCACTATCATATACTGGAGAATTGTTGGACAAGGGGAAGAACATTGTAGATGAAAACAAGAGCTGGGATGGTTTTCACATTGGTGCGTCGGCCTTATGGCCTCAGAACCAATGGGTTGCTTTCTCGACAGAAGCCTCATCATCTTCAAGAGTGCAAGACTGGGTGAAAGATCTCAGAATACAAGCCTCCGTTGAAAAGAATGAAGATGACAATGAGGGAATCGTCTCCCCACGGACACCCCCCACTCCTGAGACTCCAAAGTCTCCTGCGACTGCTAGATCGAAAAGCGCCACTTACTTCAGCCGAGGCCTTGAAGAGGATACCTTACATGCTAATACTGTGATCCAGTCTCTAAATTCTTCCTCAACAGTGGCTCACATATGTGGTATGGGCATGAAAGCCATCCCCAACATTTCATGCTTCTGCAGTCTTCGATCTGTCAACTTGTCGAACAACTTCATAGCCCACATTACTCCCGGGTCGCTGCCAAAGAGTCTTCACACGCTCAACTTGTCCAAAAACAAGCTCAGCGCCATTGAAGGACTAAGAGACTTAACCCGATTGCGAGTACTTGATCTCAGTTACAACCGAATATCTAGAATCGGACGTGGATTATCAAGCTGTAATGTATTGAAGGAGCTCTATCTTTCCGGGAACAAGATCAGCGATGTAGAGGGTCTGCATAGGCTACTGAAGCTGACAGTTCTGGACTTGAGCTTCAACAAGATCACAACAACAAAGGCACTGGGCCAGCTGGTGGCTAACTACAACTCGCTACAAGCTCTAAACCTATTAGGGAATACAATCCAGACCAACATCGGCGATGAGCAGCTACGCAAGACAGTTTGTAGTCTCCTCCCAAAGCTAGTGTACCTGAACAAGCAGTCCATCAAGCCACAAAGAGCAAGGGAGGTACTCACCGACAGCGTAGCCAAAGCTGCACTTGGAAACAAAGGGTGGAACCCTAGAAGAAAAGCCAGCAAGAAGCTTAGCCAGGGAAGTGCATCGTTTAAAAAAACTCATGCCTTGCCATCGAAGAAAAGCTCATCATTTCCTACCCACGGCAACAAGAGAGGTGCAAGTATTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001578 GO:0001889 GO:0001947 GO:0002009 GO:0003002 GO:0003007 GO:0003143 GO:0003341 GO:0003352 GO:0003356 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0005929 GO:0005930 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009855 GO:0009887 GO:0009888 GO:0009987 GO:0016020 GO:0016043 GO:0016604 GO:0016607 GO:0022607 GO:0030030 GO:0030031 GO:0030323 GO:0030324 GO:0031016 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032838 GO:0032879 GO:0032886 GO:0034622 GO:0035050 GO:0035082 GO:0035239 GO:0035295 GO:0035469 GO:0036158 GO:0036159 GO:0042995 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044441 GO:0044444 GO:0044446 GO:0044451 GO:0044458 GO:0044463 GO:0044464 GO:0044782 GO:0044877 GO:0048513 GO:0048562 GO:0048565 GO:0048568 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0050789 GO:0050794 GO:0051270 GO:0055123 GO:0060271 GO:0060429 GO:0060541 GO:0060562 GO:0060632 GO:0060972 GO:0061008 GO:0061371 GO:0065003 GO:0065007 GO:0070013 GO:0070286 GO:0070840 GO:0070925 GO:0071840 GO:0071907 GO:0071910 GO:0071944 GO:0072359 GO:0097014 GO:0099568 GO:0120025 GO:0120031 GO:0120036 GO:0120038
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_6 LRR_8

Protein Analysis

663

Amino Acids

72.57

Weight (kDa)

9.74

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 442 - 497 6.4e-10 Leucine rich repeat
LRR_4 PF12799 463 - 500 9.6e-08 Leucine Rich repeats (2 copies)
LRR_9 PF14580 463 - 548 1.9e-07 Leucine-rich repeat
LRR_8 PF13855 482 - 520 5.3e-07 Leucine rich repeat
LRR_4 PF12799 510 - 547 9e-08 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1156
Acc36I ACCTGC 1 cut(s) 783
AccB7I CCANNNNNTGG 1 cut(s) 1654
AciI CCGC 3 cut(s) 134, 284, 450
AclWI GGATC 3 cut(s) 458, 632, 1234
AcsI RAATTY 2 cut(s) 8, 1252
AcuI CTGAAG 4 cut(s) 713, 831, 1180, 1610
AfaI GTAC 4 cut(s) 212, 1467, 1769, 1812
AfiI CCNNNNNNNGG 6 cut(s) 227, 473, 489, 1213, 1654, 1958
AhdI GACNNNNNGTC 1 cut(s) 810
AjiI CACGTC 2 cut(s) 388, 1505
AjnI CCWGG 2 cut(s) 640, 1890
AjuI GAANNNNNNNTTGG 2 cut(s) 320, 352
AleI CACNNNNGTG 3 cut(s) 672, 978, 1278
AloI GAACNNNNNNTCC 2 cut(s) 1766, 1798
Alw21I GWGCWC 3 cut(s) 309, 434, 1539
Alw26I GTCTC 9 cut(s) 524, 588, 594, 1126, 1142, 1164, 1251, 1440, 1754
AlwI GGATC 3 cut(s) 458, 632, 1234
Ama87I CYCGRG 2 cut(s) 467, 1373
AoxI GGCC 5 cut(s) 480, 987, 995, 1204, 1645
ApeKI GCWGC 7 cut(s) 127, 272, 281, 645, 1381, 1726, 1835
ApoI RAATTY 2 cut(s) 8, 1252
Asp700I GAANNNNTTC 2 cut(s) 752, 1352
AspLEI GCGC 2 cut(s) 1187, 1430
AspS9I GGNCC 2 cut(s) 812, 1645
AsuC2I CCSGG 5 cut(s) 468, 469, 1374, 1375, 1549
AsuHPI GGTGA 5 cut(s) 395, 489, 888, 1072, 1807
AvaI CYCGRG 2 cut(s) 467, 1373
AvaII GGWCC 1 cut(s) 812
BanII GRGCYC 4 cut(s) 245, 320, 434, 1539
BbsI GAAGAC 2 cut(s) 1319, 1385
Bbv12I GWGCWC 3 cut(s) 309, 434, 1539
BbvI GCAGC 7 cut(s) 139, 284, 293, 657, 1368, 1738, 1822
BccI CCATC 6 cut(s) 146, 403, 959, 1307, 1793, 1936
BceAI ACGGC 1 cut(s) 1975
BciT130I CCWGG 2 cut(s) 642, 1892
BciVI GTATCC 2 cut(s) 833, 1210
BclI TGATCA 1 cut(s) 346
BcnI CCSGG 5 cut(s) 468, 469, 1374, 1375, 1549
BcoDI GTCTC 9 cut(s) 524, 588, 594, 1126, 1142, 1164, 1251, 1440, 1754
BfaI CTAG 5 cut(s) 651, 1173, 1494, 1763, 1863
BfmI CTRYAG 2 cut(s) 670, 1321
BfoI RGCGCY 2 cut(s) 1188, 1431
BfuAI ACCTGC 1 cut(s) 783
BfuI GTATCC 2 cut(s) 833, 1210
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 8 cut(s) 128, 273, 282, 285, 646, 1382, 1727, 1836
BlpI GCTNAGC 2 cut(s) 1424, 1886
BlsI GCNGC 8 cut(s) 129, 274, 283, 286, 647, 1383, 1728, 1837
BmcAI AGTACT 2 cut(s) 212, 1467
Bme1390I CCNGG 7 cut(s) 468, 469, 642, 1374, 1375, 1549, 1892
Bme18I GGWCC 1 cut(s) 812
BmeRI GACNNNNNGTC 1 cut(s) 810
BmeT110I CYCGRG 2 cut(s) 467, 1373
BmgBI CACGTC 2 cut(s) 388, 1505
BmgT120I GGNCC 2 cut(s) 812, 1645
BmiI GGNNCC 6 cut(s) 242, 334, 764, 773, 814, 1859
BmrFI CCNGG 7 cut(s) 468, 469, 642, 1374, 1375, 1549, 1892
BmrI ACTGGG 2 cut(s) 1066, 1652
BmsI GCATC 6 cut(s) 463, 503, 558, 678, 781, 1910
BmuI ACTGGG 2 cut(s) 1066, 1652
BpiI GAAGAC 2 cut(s) 1319, 1385
BpmI CTGGAG 1 cut(s) 933
Bpu10I CCTNAGC 1 cut(s) 322
Bpu1102I GCTNAGC 2 cut(s) 1424, 1886
BpuEI CTTGAG 2 cut(s) 420, 1630
BpuMI CCSGG 5 cut(s) 468, 469, 1374, 1375, 1549
BsaBI GATNNNNATC 1 cut(s) 636
BsaJI CCNNGG 8 cut(s) 327, 467, 468, 1127, 1201, 1373, 1891, 1957
BsaWI WCCGGW 1 cut(s) 258
Bsc4I CCNNNNNNNGG 6 cut(s) 227, 473, 489, 1213, 1654, 1958
Bse118I RCCGGY 1 cut(s) 166
Bse1I ACTGG 4 cut(s) 916, 1061, 1243, 1647
Bse8I GATNNNNATC 1 cut(s) 636
BseBI CCWGG 2 cut(s) 642, 1892
BseDI CCNNGG 8 cut(s) 327, 467, 468, 1127, 1201, 1373, 1891, 1957
BseGI GGATG 4 cut(s) 637, 796, 970, 1299
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 6 cut(s) 227, 473, 489, 1213, 1654, 1958
BseMII CTCAG 5 cut(s) 1013, 1084, 1137, 1438, 1489
BseNI ACTGG 4 cut(s) 916, 1061, 1243, 1647
BseRI GAGGAG 1 cut(s) 1742
BseXI GCAGC 7 cut(s) 139, 284, 293, 657, 1368, 1738, 1822
BseYI CCCAGC 1 cut(s) 960
BsgI GTGCAG 2 cut(s) 761, 1821
BshFI GGCC 5 cut(s) 482, 989, 997, 1206, 1647
BsiHKAI GWGCWC 3 cut(s) 309, 434, 1539
BsiHKCI CYCGRG 2 cut(s) 467, 1373
BsiSI CCGG 6 cut(s) 167, 259, 468, 605, 1374, 1548
BslFI GGGAC 1 cut(s) 798
BslI CCNNNNNNNGG 6 cut(s) 227, 473, 489, 1213, 1654, 1958
BsmAI GTCTC 9 cut(s) 524, 588, 594, 1126, 1142, 1164, 1251, 1440, 1754
BsmBI CGTCTC 1 cut(s) 1126
BsmFI GGGAC 1 cut(s) 798
BsmI GAATGC 1 cut(s) 700
BsnI GGCC 5 cut(s) 482, 989, 997, 1206, 1647
BsoBI CYCGRG 2 cut(s) 467, 1373
Bsp1286I GDGCHC 5 cut(s) 245, 309, 320, 434, 1539
Bsp1720I GCTNAGC 2 cut(s) 1424, 1886
BspACI CCGC 3 cut(s) 134, 284, 450
BspANI GGCC 5 cut(s) 482, 989, 997, 1206, 1647
BspCNI CTCAG 5 cut(s) 1012, 1083, 1138, 1437, 1488
BspLI GGNNCC 6 cut(s) 242, 334, 764, 773, 814, 1859
BspMAI CTGCAG 1 cut(s) 1325
BspMI ACCTGC 1 cut(s) 783
BspPI GGATC 3 cut(s) 458, 632, 1234
BsrFI RCCGGY 1 cut(s) 166
BsrI ACTGG 4 cut(s) 916, 1061, 1243, 1647
BssAI RCCGGY 1 cut(s) 166
BssECI CCNNGG 8 cut(s) 327, 467, 468, 1127, 1201, 1373, 1891, 1957
BssT1I CCWWGG 1 cut(s) 327
Bst2UI CCWGG 2 cut(s) 642, 1892
Bst4CI ACNGT 6 cut(s) 141, 674, 1237, 1267, 1600, 1741
Bst6I CTCTTC 3 cut(s) 220, 850, 1206
BstC8I GCNNGC 5 cut(s) 168, 452, 573, 1649, 1876
BstDSI CCRYGG 2 cut(s) 1127, 1957
BstENI CCTNNNNNAGG 1 cut(s) 1211
BstF5I GGATG 4 cut(s) 637, 796, 970, 1299
BstH2I RGCGCY 2 cut(s) 1188, 1431
BstHHI GCGC 2 cut(s) 1187, 1430
BstMAI GTCTC 9 cut(s) 524, 588, 594, 1126, 1142, 1164, 1251, 1440, 1754
BstMWI GCNNNNNNNGC 6 cut(s) 133, 278, 281, 697, 1591, 1835
BstNI CCWGG 2 cut(s) 642, 1892
BstNSI RCATGY 1 cut(s) 1229
BstSCI CCNGG 7 cut(s) 466, 467, 640, 1372, 1373, 1547, 1890
BstSFI CTRYAG 2 cut(s) 670, 1321
BstV1I GCAGC 7 cut(s) 139, 284, 293, 657, 1368, 1738, 1822
BstV2I GAAGAC 2 cut(s) 1319, 1385
BstX2I RGATCY 1 cut(s) 1066
BstYI RGATCY 1 cut(s) 1066
BsuI GTATCC 2 cut(s) 833, 1210
BsuRI GGCC 5 cut(s) 482, 989, 997, 1206, 1647
BtgI CCRYGG 2 cut(s) 1127, 1957
BtgZI GCGATG 2 cut(s) 1578, 1734
BtrI CACGTC 2 cut(s) 388, 1505
BtsCI GGATG 4 cut(s) 637, 796, 970, 1299
BtsIMutI CAGTG 4 cut(s) 679, 828, 1272, 1640
BveI ACCTGC 1 cut(s) 783
Cac8I GCNNGC 5 cut(s) 168, 452, 573, 1649, 1876
CfoI GCGC 2 cut(s) 1187, 1430
Cfr10I RCCGGY 1 cut(s) 166
Cfr13I GGNCC 2 cut(s) 812, 1645
Cfr9I CCCGGG 2 cut(s) 467, 1373
CseI GACGC 1 cut(s) 972
Csp6I GTAC 4 cut(s) 211, 1466, 1768, 1811
CviAII CATG 5 cut(s) 516, 1226, 1291, 1314, 1919
CviQI GTAC 4 cut(s) 211, 1466, 1768, 1811
DraI TTTAAA 1 cut(s) 1909
DrdI GACNNNNNNGTC 1 cut(s) 1156
DriI GACNNNNNGTC 1 cut(s) 810
DseDI GACNNNNNNGTC 1 cut(s) 1156
Eam1104I CTCTTC 3 cut(s) 220, 850, 1206
Eam1105I GACNNNNNGTC 1 cut(s) 810
EarI CTCTTC 3 cut(s) 220, 850, 1206
Ecl136II GAGCTC 2 cut(s) 432, 1537
Eco130I CCWWGG 1 cut(s) 327
Eco147I AGGCCT 1 cut(s) 1206
Eco24I GRGCYC 4 cut(s) 245, 320, 434, 1539
Eco47I GGWCC 1 cut(s) 812
Eco53kI GAGCTC 2 cut(s) 432, 1537
Eco57I CTGAAG 4 cut(s) 713, 831, 1180, 1610
Eco88I CYCGRG 2 cut(s) 467, 1373
EcoICRI GAGCTC 2 cut(s) 432, 1537
EcoNI CCTNNNNNAGG 1 cut(s) 1211
EcoRII CCWGG 2 cut(s) 640, 1890
EcoT14I CCWWGG 1 cut(s) 327
EcoT38I GRGCYC 4 cut(s) 245, 320, 434, 1539
ErhI CCWWGG 1 cut(s) 327
Esp3I CGTCTC 1 cut(s) 1126
FaeI CATG 5 cut(s) 519, 1229, 1294, 1317, 1922
FalI AAGNNNNNCTT 6 cut(s) 320, 352, 1174, 1206, 1824, 1856
FaqI GGGAC 1 cut(s) 798
FatI CATG 5 cut(s) 515, 1225, 1290, 1313, 1918
FauI CCCGC 1 cut(s) 443
FauNDI CATATG 1 cut(s) 1277
FbaI TGATCA 1 cut(s) 346
Fnu4HI GCNGC 8 cut(s) 128, 273, 282, 285, 646, 1382, 1727, 1836
FokI GGATG 4 cut(s) 644, 803, 977, 1286
FriOI GRGCYC 4 cut(s) 245, 320, 434, 1539
Fsp4HI GCNGC 8 cut(s) 128, 273, 282, 285, 646, 1382, 1727, 1836
FspBI CTAG 5 cut(s) 651, 1173, 1494, 1763, 1863
GlaI GCGC 2 cut(s) 1186, 1429
GluI GCNGC 8 cut(s) 128, 273, 282, 285, 646, 1382, 1727, 1836
GsaI CCCAGC 1 cut(s) 964
GsuI CTGGAG 1 cut(s) 933
HaeII RGCGCY 2 cut(s) 1188, 1431
HaeIII GGCC 5 cut(s) 482, 989, 997, 1206, 1647
HapII CCGG 6 cut(s) 167, 259, 468, 605, 1374, 1548
HgaI GACGC 1 cut(s) 972
HhaI GCGC 2 cut(s) 1187, 1430
Hin1II CATG 5 cut(s) 519, 1229, 1294, 1317, 1922
Hin6I GCGC 2 cut(s) 1185, 1428
HinP1I GCGC 2 cut(s) 1185, 1428
HincII GTYRAC 1 cut(s) 1339
HindII GTYRAC 1 cut(s) 1339
HindIII AAGCTT 2 cut(s) 503, 1883
HpaII CCGG 6 cut(s) 167, 259, 468, 605, 1374, 1548
HphI GGTGA 5 cut(s) 395, 489, 888, 1072, 1807
Hpy166II GTNNAC 4 cut(s) 88, 826, 1339, 1768
Hpy188I TCNGA 8 cut(s) 179, 225, 355, 418, 850, 1002, 1073, 1502
Hpy188III TCNNGA 7 cut(s) 726, 1021, 1044, 1145, 1494, 1604, 1705
Hpy8I GTNNAC 4 cut(s) 88, 826, 1339, 1768
Hpy99I CGWCG 1 cut(s) 988
HpyAV CCTTC 7 cut(s) 40, 287, 346, 622, 732, 1430, 1525
HpyCH4III ACNGT 6 cut(s) 141, 674, 1237, 1267, 1600, 1741
HpyCH4IV ACGT 2 cut(s) 387, 1504
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 278, 281, 697, 1591, 1835
HpySE526I ACGT 2 cut(s) 387, 1504
Hsp92II CATG 5 cut(s) 519, 1229, 1294, 1317, 1922
HspAI GCGC 2 cut(s) 1185, 1428
KroI GCCGGC 1 cut(s) 166
KroNI GCCGGC 1 cut(s) 168
Ksp22I TGATCA 1 cut(s) 346
LmnI GCTCC 3 cut(s) 240, 762, 1534
Lsp1109I GCAGC 7 cut(s) 139, 284, 293, 657, 1368, 1738, 1822
LweI GCATC 6 cut(s) 463, 503, 558, 678, 781, 1910
MaeI CTAG 5 cut(s) 651, 1173, 1494, 1763, 1863
MaeII ACGT 2 cut(s) 387, 1504
MaeIII GTNAC 3 cut(s) 383, 388, 1478
MflI RGATCY 1 cut(s) 1066
MhlI GDGCHC 5 cut(s) 245, 309, 320, 434, 1539
MluCI AATT 8 cut(s) 8, 27, 96, 376, 523, 737, 917, 1252
MlyI GAGTC 5 cut(s) 189, 385, 526, 1144, 1399
MmeI TCCRAC 3 cut(s) 123, 387, 903
MroNI GCCGGC 1 cut(s) 166
MroXI GAANNNNTTC 2 cut(s) 752, 1352
MseI TTAA 5 cut(s) 26, 51, 549, 1451, 1908
MslI CAYNNNNRTG 4 cut(s) 459, 672, 978, 1278
MspA1I CMGCKG 2 cut(s) 284, 1651
MspI CCGG 6 cut(s) 167, 259, 468, 605, 1374, 1548
MspR9I CCNGG 7 cut(s) 468, 469, 642, 1374, 1375, 1549, 1892
Mva1269I GAATGC 1 cut(s) 700
MvaI CCWGG 2 cut(s) 642, 1892
MwoI GCNNNNNNNGC 6 cut(s) 133, 278, 281, 697, 1591, 1835
NaeI GCCGGC 1 cut(s) 168
NciI CCSGG 5 cut(s) 468, 469, 1374, 1375, 1549
NdeI CATATG 1 cut(s) 1277
NgoMIV GCCGGC 1 cut(s) 166
NlaIII CATG 5 cut(s) 519, 1229, 1294, 1317, 1922
NlaIV GGNNCC 6 cut(s) 242, 334, 764, 773, 814, 1859
NmeAIII GCCGAG 2 cut(s) 508, 1226
NmuCI GTSAC 2 cut(s) 383, 388
NspI RCATGY 1 cut(s) 1229
OliI CACNNNNGTG 3 cut(s) 672, 978, 1278
PceI AGGCCT 1 cut(s) 1206
PctI GAATGC 1 cut(s) 700
PdiI GCCGGC 1 cut(s) 168
PdmI GAANNNNTTC 2 cut(s) 752, 1352
PfeI GAWTC 5 cut(s) 65, 425, 893, 1116, 1497
PflMI CCANNNNNTGG 1 cut(s) 1654
PfoI TCCNGGA 1 cut(s) 1547
PkrI GCNGC 8 cut(s) 129, 274, 283, 286, 647, 1383, 1728, 1837
PleI GAGTC 5 cut(s) 188, 385, 526, 1144, 1398
PpsI GAGTC 5 cut(s) 188, 385, 526, 1144, 1398
Psp124BI GAGCTC 2 cut(s) 434, 1539
Psp6I CCWGG 2 cut(s) 640, 1890
PspFI CCCAGC 1 cut(s) 960
PspGI CCWGG 2 cut(s) 640, 1890
PspN4I GGNNCC 6 cut(s) 242, 334, 764, 773, 814, 1859
PspPI GGNCC 2 cut(s) 812, 1645
PstI CTGCAG 1 cut(s) 1325
PsuI RGATCY 1 cut(s) 1066
PvuII CAGCTG 1 cut(s) 1651
RsaI GTAC 4 cut(s) 212, 1467, 1769, 1812
RsaNI GTAC 4 cut(s) 211, 1466, 1768, 1811
RseI CAYNNNNRTG 4 cut(s) 459, 672, 978, 1278
SacI GAGCTC 2 cut(s) 434, 1539
SaqAI TTAA 5 cut(s) 26, 51, 549, 1451, 1908
SatI GCNGC 8 cut(s) 128, 273, 282, 285, 646, 1382, 1727, 1836
Sau96I GGNCC 2 cut(s) 812, 1645
ScaI AGTACT 2 cut(s) 212, 1467
SchI GAGTC 5 cut(s) 189, 385, 526, 1144, 1399
ScrFI CCNGG 7 cut(s) 468, 469, 642, 1374, 1375, 1549, 1892
SduI GDGCHC 5 cut(s) 245, 309, 320, 434, 1539
SfaNI GCATC 6 cut(s) 463, 503, 558, 678, 781, 1910
SfcI CTRYAG 2 cut(s) 670, 1321
SinI GGWCC 1 cut(s) 812
SmaI CCCGGG 2 cut(s) 469, 1375
SmiMI CAYNNNNRTG 4 cut(s) 459, 672, 978, 1278
SmlI CTYRAG 2 cut(s) 435, 1609
SmoI CTYRAG 2 cut(s) 435, 1609
Sse9I AATT 8 cut(s) 8, 27, 96, 376, 523, 737, 917, 1252
SseBI AGGCCT 1 cut(s) 1206
SsiI CCGC 3 cut(s) 134, 284, 450
SspMI CTAG 5 cut(s) 651, 1173, 1494, 1763, 1863
SstI GAGCTC 2 cut(s) 434, 1539
StuI AGGCCT 1 cut(s) 1206
StyD4I CCNGG 7 cut(s) 466, 467, 640, 1372, 1373, 1547, 1890
StyI CCWWGG 1 cut(s) 327
TaaI ACNGT 6 cut(s) 141, 674, 1237, 1267, 1600, 1741
TaiI ACGT 2 cut(s) 390, 1507
TasI AATT 8 cut(s) 8, 27, 96, 376, 523, 737, 917, 1252
TatI WGTACW 2 cut(s) 210, 1465
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 5 cut(s) 65, 425, 893, 1116, 1497
Tru1I TTAA 5 cut(s) 26, 51, 549, 1451, 1908
Tru9I TTAA 5 cut(s) 26, 51, 549, 1451, 1908
TscAI CASTG 4 cut(s) 679, 828, 1272, 1647
TseFI GTSAC 2 cut(s) 383, 388
TseI GCWGC 7 cut(s) 127, 272, 281, 645, 1381, 1726, 1835
Tsp45I GTSAC 2 cut(s) 383, 388
TspDTI ATGAA 6 cut(s) 78, 963, 1113, 1302, 1307, 1345
TspGWI ACGGA 3 cut(s) 905, 1075, 1144
TspMI CCCGGG 2 cut(s) 467, 1373
TspRI CASTG 4 cut(s) 679, 828, 1272, 1647
Van91I CCANNNNNTGG 1 cut(s) 1654
VpaK11BI GGWCC 1 cut(s) 812
XagI CCTNNNNNAGG 1 cut(s) 1211
XapI RAATTY 2 cut(s) 8, 1252
XbaI TCTAGA 1 cut(s) 1493
XceI RCATGY 1 cut(s) 1229
XcmI CCANNNNNNNNNTGG 1 cut(s) 191
XmaI CCCGGG 2 cut(s) 467, 1373
XmnI GAANNNNTTC 2 cut(s) 752, 1352
XspI CTAG 5 cut(s) 651, 1173, 1494, 1763, 1863
ZrmI AGTACT 2 cut(s) 212, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.