Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009385

Physical Location & Seq

Genomic Coordinates Forward (+)

29985046 .. 29990388

Gene Structure 5343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G79690.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGCGGAGGAGCACTTCGACGTTCTGACTAAATCCGGTGAGAAGACCGGTGTGTCCAAACCCAGGGGAGAGGTTCACAGAGATGGAGATTACCATCGTGCTGTTCATGTCTGGATTTTTGTGGAGACTACTCAACAGCTACTTCTCCAACTTCGATCTGATGATAAAGATTCTTGGCCTGGTCAATGGGACATCTCTAGTGCTGGCCATATATCAGCTGGTGATACATCGCTTCTATCTGCACAGCGGGAGCTTGAGGAAGAGCTTGGCGTAAAACTCCCAAAGGATGCATTTGAAAAGATCTTCGTTTTTCTGCAGGAATGTGTCACAAACGATGGCAAATTCATAAATAATGAGTTCAATGATGTGTATCTTGTTACTATTCTGCATCCAATCCCATTAGAAGCCTTTACTCTTCAAAAAGAGGAAGTCTCTGCTGTAAAGTACGTACCTTACGAAGAATACAGAAACTTTCTGTCTAAGGAAGATCCTGCTTATGTGCCATATGATGTTAATGGAGAGTATGGAAAACTATTTGACATAATCAGACAGAGGTGCCAAGTGAACACTGAGGCCCGTAGTTTATCTCTGCAGAAGCAACTCCAGAGATATTCTCCAGTCACCCTCGAAGCCAAGTTGACAGAACTTTCTGAAGCAGATCAGAAAGCGTTGGGTCTAATTGTGAAGGCTGCAAAAATTATGGACGATATATTCTATGAGCAGGTTTGGAACAGCAATCCAGCCCTAAGAGATTGGCTGAAGGATCATGCCAATGCATCAAAACTGGACAAACTAAAATGGGATTACTTCACGATCAACAAAAGTCCATGGTCGTCTCTTGATGAAAATGAAGCATTCTTGAGTACTGCGGATTCAGCTGTAAAGTTGCTTCCTGGAGCAACAAAAGCCATAGCTGGCTGGAAGGGTCTTGAATATAGAGCAGCCTTTCCAGTGACTAAACCACCTGGTGCCAATTTCTATCCTCCCGATATGGATAAAATGGAGTTCACCTTATGGCTCAATGGCCTTACGGAAGAGCAAAAGCATGCTGCAACAGGATTTTTCAGTGTTATAAAAAGGCGAAGTGAAGCTAATTTAGATGCTTCTGATCATCTTGCCAGCAGCACAAAGAAGTTACCAGACTCTAATTCCGATCTGTATAGTATTCCTTATTCAGAGATATATCGACCTTTCCTCAAGAAAGCTTCTGAATTCTTGCAGAAAGCTGGGGACTTGGTCAGTTCGCCAAGTTTGAAGAAGCTACTGCACAGCAAAGCTGAAGCCTTCCTTTCAAATGAGTATTATGAGTCAGACATCGCATGGATGGACTTGGATTCAAAGTTAGATATTACCATTGGTCCATATGAGACGTACGAGGATGAAATCTTTGGGTATAAGGCTACATTTGAAACCTTCATCGGTATTCGAGATGATAAAGCCACAGCTGATCTGAAACTCTTTGGTGACAATCTAAAGCTATTGGAAGATAATCTCCCGCTTGAGAGTGTATACAAATCGACAGATGTATCTGCTGCTCCTATTCGGGTCATCCAGTTAATTTACAATTCCGGGGATGTGAAGGGTCCTCAGACTGTTGCTTACAATTTGCCAAACGATGAAAAAATCGTGAAGGATAGAGGAACATCAATGGTTATGCTCAAGAACGTCCAAGAGGCAAAGTTTGAACATATTTTAAAGCCTATAGCTGAAATCACCATCAGCAAGGAACAGAGAGGATTAGTTGATTTTGATTCTTTCTTCACTCACACCATTTGCCATGAATGTTGCCATGGCATTGGTCCCCATACCATAACCCTTCCTGGTGGTCAAACCTCAACAGTGAGAAAGGAACTACAAGAAGTCCATTCTGCAATGGAAGAAGCAAAGGCAGATATAGTTGGTCTTTGGGCACTGAAGTTTCTCATCACTAAGGGGTTGCTTTCAAAGAGTATGGTGGAGAGTATGTATGTTTCGTTCCTAGCTGGTTGCTTTAGATCGATCCGGTTTGGTCTCACAGAAGCTCATGGGAAAGGGCAAGCCTTGCAATTCAACTATTTATATGAAAAAGGAGCCTTCGTGTTCCACGAGGACTCTACATTCTCGGTTGATTTCGCTAAGATCGAAGGTGCAGTTGAGAGCCTGAGCCATGAGATACTAACTATTCAAGGAAAAGGTGACAAAAACGCAGCAACATTGCTTCTAAATAAGTACTGCACTATCACCGGACCATTGAAAACCGCTCTGGAGAATCTCGAACGCGTTAAGGTACCGGTGGATATATCTCCGACATTTCCATTAGCAGAAGCATTGATGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

772

Amino Acids

86.86

Weight (kDa)

5.27

Isoelectric Point (pI)

34.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUDIX	PF00293	31 - 157	4.7e-14	NUDIX domain
Peptidase_M49	PF03571	394 - 600	6.5e-09	Peptidase family M49

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79690 AT1G79690
fragaria_vesca	FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160
malus_domestica	MD17G1227300.v1.1
prunus_persica	Prupe.3G104700_v2.0.a1
pyrus_communis	pycom17g23060
rosa_chinensis	RchiOBHm_Chr2g0132121
rosa_laevigata	RLG00000019229
rosa_multiflora	Rmu_sc0002005.1_g000003 Rmu_sc0009538.1_g000018 Rmu_sc0033552.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112380
rosa_rugosa	Rorug02G0302400
rosa_samantha	Rh2AG355500 Rh2BG361600 Rh2CG339000
rosa_wichuraiana	Rw2G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1073
AasI	GACNNNNNNGTC	1 cut(s)	52
Acc36I	ACCTGC	1 cut(s)	712
Acc65I	GGTACC	1 cut(s)	2266
AccB1I	GGYRCC	3 cut(s)	555, 968, 2266
AccBSI	CCGCTC	1 cut(s)	2240
AccI	GTMKAC	1 cut(s)	1509
AccII	CGCG	1 cut(s)	2259
AciI	CCGC	5 cut(s)	5, 247, 869, 1496, 2238
AclWI	GGATC	3 cut(s)	482, 771, 1993
AcoI	YGGCCR	1 cut(s)	205
AcsI	RAATTY	2 cut(s)	341, 1211
AcuI	CTGAAG	4 cut(s)	672, 779, 1299, 1934
AdeI	CACNNNGTG	1 cut(s)	968
AfaI	GTAC	6 cut(s)	446, 450, 865, 1373, 2210, 2268
AfiI	CCNNNNNNNGG	1 cut(s)	63
AflIII	ACRYGT	1 cut(s)	2257
AgeI	ACCGGT	2 cut(s)	47, 2269
AjnI	CCWGG	5 cut(s)	62, 178, 892, 964, 1819
Alw21I	GWGCWC	1 cut(s)	15
Alw26I	GTCTC	5 cut(s)	119, 436, 840, 1361, 2015
AlwI	GGATC	3 cut(s)	482, 771, 1993
AoxI	GGCC	4 cut(s)	176, 205, 573, 1024
ApeKI	GCWGC	6 cut(s)	689, 941, 1049, 1122, 1532, 2186
ApoI	RAATTY	2 cut(s)	341, 1211
AsiGI	ACCGGT	2 cut(s)	47, 2269
Asp718I	GGTACC	1 cut(s)	2266
AspS9I	GGNCC	5 cut(s)	574, 1358, 1583, 1799, 2225
AsuC2I	CCSGG	1 cut(s)	1570
AsuHPI	GGTGA	8 cut(s)	50, 233, 613, 1000, 1475, 1705, 2186, 2212
AvaII	GGWCC	4 cut(s)	1358, 1583, 1799, 2225
BaeGI	GKGCMC	1 cut(s)	1912
BaeI	ACNNNNGTAYC	2 cut(s)	1509, 1542
BalI	TGGCCA	1 cut(s)	207
BanI	GGYRCC	3 cut(s)	555, 968, 2266
BarI	GAAGNNNNNNTAC	2 cut(s)	873, 905
BauI	CACGAG	1 cut(s)	2084
BbsI	GAAGAC	1 cut(s)	50
Bbv12I	GWGCWC	1 cut(s)	15
BbvI	GCAGC	6 cut(s)	676, 953, 1036, 1134, 1519, 2198
BccI	CCATC	5 cut(s)	77, 102, 329, 1318, 1724
BciT130I	CCWGG	5 cut(s)	64, 180, 894, 966, 1821
BclI	TGATCA	1 cut(s)	1108
BcnI	CCSGG	1 cut(s)	1570
BcoDI	GTCTC	5 cut(s)	119, 436, 840, 1361, 2015
BfaI	CTAG	2 cut(s)	198, 1979
BfmI	CTRYAG	3 cut(s)	314, 590, 1701
BfuAI	ACCTGC	1 cut(s)	712
BglII	AGATCT	1 cut(s)	300
BisI	GCNGC	6 cut(s)	690, 942, 1050, 1123, 1533, 2187
BlsI	GCNGC	6 cut(s)	691, 943, 1051, 1124, 1534, 2188
BmcAI	AGTACT	2 cut(s)	865, 2210
Bme1390I	CCNGG	6 cut(s)	64, 180, 894, 966, 1570, 1821
Bme18I	GGWCC	4 cut(s)	1358, 1583, 1799, 2225
BmgT120I	GGNCC	5 cut(s)	574, 1358, 1583, 1799, 2225
BmiI	GGNNCC	6 cut(s)	557, 970, 1584, 1801, 2071, 2268
BmrFI	CCNGG	6 cut(s)	64, 180, 894, 966, 1570, 1821
BmsI	GCATC	4 cut(s)	277, 397, 785, 1090
BpiI	GAAGAC	1 cut(s)	50
BplI	GAGNNNNNCTC	4 cut(s)	416, 448, 598, 630
BpmI	CTGGAG	4 cut(s)	587, 600, 915, 2264
Bpu10I	CCTNAGC	1 cut(s)	2141
BpuEI	CTTGAG	5 cut(s)	275, 880, 1181, 1520, 1643
BpuMI	CCSGG	1 cut(s)	1570
Bsa29I	ATCGAT	1 cut(s)	1997
BsaAI	YACGTR	1 cut(s)	448
BsaBI	GATNNNNATC	2 cut(s)	93, 369
BsaI	GGTCTC	1 cut(s)	2015
BsaJI	CCNNGG	5 cut(s)	62, 63, 827, 1569, 1789
BsaWI	WCCGGW	5 cut(s)	35, 47, 2001, 2222, 2269
BsaXI	ACNNNNNCTCC	4 cut(s)	1949, 1979, 2061, 2091
Bsc4I	CCNNNNNNNGG	1 cut(s)	63
Bse118I	RCCGGY	2 cut(s)	47, 2269
Bse1I	ACTGG	4 cut(s)	617, 789, 950, 1552
Bse3DI	GCAATG	2 cut(s)	1878, 2192
Bse8I	GATNNNNATC	2 cut(s)	93, 369
BseBI	CCWGG	5 cut(s)	64, 180, 894, 966, 1821
BseCI	ATCGAT	1 cut(s)	1997
BseDI	CCNNGG	5 cut(s)	62, 63, 827, 1569, 1789
BseGI	GGATG	6 cut(s)	292, 388, 1329, 1384, 1548, 1579
BseJI	GATNNNNATC	2 cut(s)	93, 369
BseLI	CCNNNNNNNGG	1 cut(s)	63
BseMI	GCAATG	2 cut(s)	1878, 2192
BseMII	CTCAG	3 cut(s)	561, 1601, 2132
BseNI	ACTGG	4 cut(s)	617, 789, 950, 1552
BseRI	GAGGAG	1 cut(s)	23
BseSI	GKGCMC	1 cut(s)	1912
BseXI	GCAGC	6 cut(s)	676, 953, 1036, 1134, 1519, 2198
BseYI	CCCAGC	1 cut(s)	1226
BsgI	GTGCAG	4 cut(s)	225, 1250, 2148, 2197
Bsh1236I	CGCG	1 cut(s)	2259
BshFI	GGCC	4 cut(s)	178, 207, 575, 1026
BshNI	GGYRCC	3 cut(s)	555, 968, 2266
BshTI	ACCGGT	2 cut(s)	47, 2269
BshVI	ATCGAT	1 cut(s)	1997
BsiHKAI	GWGCWC	1 cut(s)	15
BsiSI	CCGG	6 cut(s)	36, 48, 1569, 2002, 2223, 2270
BsiWI	CGTACG	1 cut(s)	1371
BslFI	GGGAC	3 cut(s)	203, 1244, 1785
BslI	CCNNNNNNNGG	1 cut(s)	63
BsmAI	GTCTC	5 cut(s)	119, 436, 840, 1361, 2015
BsmBI	CGTCTC	2 cut(s)	840, 1361
BsmFI	GGGAC	3 cut(s)	203, 1244, 1785
BsmI	GAATGC	1 cut(s)	854
BsnI	GGCC	4 cut(s)	178, 207, 575, 1026
Bso31I	GGTCTC	1 cut(s)	2015
Bsp1286I	GDGCHC	2 cut(s)	15, 1912
Bsp19I	CCATGG	2 cut(s)	827, 1789
BspACI	CCGC	5 cut(s)	5, 247, 869, 1496, 2238
BspANI	GGCC	4 cut(s)	178, 207, 575, 1026
BspCNI	CTCAG	3 cut(s)	562, 1600, 2133
BspDI	ATCGAT	1 cut(s)	1997
BspFNI	CGCG	1 cut(s)	2259
BspLI	GGNNCC	6 cut(s)	557, 970, 1584, 1801, 2071, 2268
BspMAI	CTGCAG	2 cut(s)	318, 594
BspMI	ACCTGC	1 cut(s)	712
BspPI	GGATC	3 cut(s)	482, 771, 1993
BspQI	GCTCTTC	2 cut(s)	255, 1029
BspT107I	GGYRCC	3 cut(s)	555, 968, 2266
BspTNI	GGTCTC	1 cut(s)	2015
BsrBI	CCGCTC	1 cut(s)	2240
BsrDI	GCAATG	2 cut(s)	1878, 2192
BsrFI	RCCGGY	2 cut(s)	47, 2269
BsrI	ACTGG	4 cut(s)	617, 789, 950, 1552
BssAI	RCCGGY	2 cut(s)	47, 2269
BssECI	CCNNGG	5 cut(s)	62, 63, 827, 1569, 1789
BssNAI	GTATAC	1 cut(s)	1510
BssSI	CACGAG	1 cut(s)	2084
BssT1I	CCWWGG	2 cut(s)	827, 1789
Bst1107I	GTATAC	1 cut(s)	1510
Bst2BI	CACGAG	1 cut(s)	2084
Bst2UI	CCWGG	5 cut(s)	64, 180, 894, 966, 1821
Bst4CI	ACNGT	2 cut(s)	1594, 1840
Bst6I	CTCTTC	3 cut(s)	255, 420, 1029
BstAPI	GCANNNNNTGC	1 cut(s)	2041
BstBAI	YACGTR	1 cut(s)	448
BstC8I	GCNNGC	5 cut(s)	205, 916, 1047, 1120, 2037
BstDEI	CTNAG	7 cut(s)	480, 570, 746, 1587, 1929, 2115, 2141
BstDSI	CCRYGG	2 cut(s)	827, 1789
BstF5I	GGATG	6 cut(s)	292, 388, 1329, 1384, 1548, 1579
BstFNI	CGCG	1 cut(s)	2259
BstMAI	GTCTC	5 cut(s)	119, 436, 840, 1361, 2015
BstMWI	GCNNNNNNNGC	3 cut(s)	875, 905, 2041
BstNI	CCWGG	5 cut(s)	64, 180, 894, 966, 1821
BstNSI	RCATGY	1 cut(s)	1049
BstSCI	CCNGG	6 cut(s)	62, 178, 892, 964, 1568, 1819
BstSFI	CTRYAG	3 cut(s)	314, 590, 1701
BstSLI	GKGCMC	1 cut(s)	1912
BstSNI	TACGTA	1 cut(s)	448
BstUI	CGCG	1 cut(s)	2259
BstV1I	GCAGC	6 cut(s)	676, 953, 1036, 1134, 1519, 2198
BstV2I	GAAGAC	1 cut(s)	50
BstX2I	RGATCY	2 cut(s)	300, 487
BstXI	CCANNNNNNTGG	1 cut(s)	1796
BstYI	RGATCY	2 cut(s)	300, 487
BstZ17I	GTATAC	1 cut(s)	1510
Bsu15I	ATCGAT	1 cut(s)	1997
BsuRI	GGCC	4 cut(s)	178, 207, 575, 1026
BsuTUI	ATCGAT	1 cut(s)	1997
BtgI	CCRYGG	2 cut(s)	827, 1789
BtgZI	GCGATG	2 cut(s)	213, 1300
BtsCI	GGATG	6 cut(s)	292, 388, 1329, 1384, 1548, 1579
BtsIMutI	CAGTG	5 cut(s)	567, 957, 1072, 1845, 1910
BveI	ACCTGC	1 cut(s)	712
Cac8I	GCNNGC	5 cut(s)	205, 916, 1047, 1120, 2037
Cfr10I	RCCGGY	2 cut(s)	47, 2269
Cfr13I	GGNCC	5 cut(s)	574, 1358, 1583, 1799, 2225
ClaI	ATCGAT	1 cut(s)	1997
CsiI	ACCWGGT	1 cut(s)	964
Csp6I	GTAC	6 cut(s)	445, 449, 864, 1372, 2209, 2267
CspAI	ACCGGT	2 cut(s)	47, 2269
CviAII	CATG	9 cut(s)	107, 767, 828, 1046, 1320, 1778, 1790, 2024, 2147
CviQI	GTAC	6 cut(s)	445, 449, 864, 1372, 2209, 2267
DdeI	CTNAG	7 cut(s)	480, 570, 746, 1587, 1929, 2115, 2141
DraI	TTTAAA	1 cut(s)	1695
DraIII	CACNNNGTG	1 cut(s)	968
DrdI	GACNNNNNNGTC	1 cut(s)	52
DseDI	GACNNNNNNGTC	1 cut(s)	52
EaeI	YGGCCR	1 cut(s)	205
Eam1104I	CTCTTC	3 cut(s)	255, 420, 1029
EarI	CTCTTC	3 cut(s)	255, 420, 1029
EciI	GGCGGA	1 cut(s)	20
Eco105I	TACGTA	1 cut(s)	448
Eco130I	CCWWGG	2 cut(s)	827, 1789
Eco31I	GGTCTC	1 cut(s)	2015
Eco47I	GGWCC	4 cut(s)	1358, 1583, 1799, 2225
Eco57I	CTGAAG	4 cut(s)	672, 779, 1299, 1934
EcoO109I	RGGNCCY	1 cut(s)	1583
EcoRI	GAATTC	1 cut(s)	1211
EcoRII	CCWGG	5 cut(s)	62, 178, 892, 964, 1819
EcoT14I	CCWWGG	2 cut(s)	827, 1789
EcoT22I	ATGCAT	2 cut(s)	292, 778
ErhI	CCWWGG	2 cut(s)	827, 1789
Esp3I	CGTCTC	2 cut(s)	840, 1361
FaeI	CATG	9 cut(s)	110, 770, 831, 1049, 1323, 1781, 1793, 2027, 2150
FalI	AAGNNNNNCTT	2 cut(s)	1272, 1304
FaqI	GGGAC	3 cut(s)	203, 1244, 1785
FatI	CATG	9 cut(s)	106, 766, 827, 1045, 1319, 1777, 1789, 2023, 2146
FauI	CCCGC	2 cut(s)	240, 1503
FauNDI	CATATG	2 cut(s)	505, 1363
FbaI	TGATCA	1 cut(s)	1108
FblI	GTMKAC	1 cut(s)	1509
Fnu4HI	GCNGC	6 cut(s)	690, 942, 1050, 1123, 1533, 2187
FokI	GGATG	6 cut(s)	299, 375, 1336, 1391, 1535, 1586
Fsp4HI	GCNGC	6 cut(s)	690, 942, 1050, 1123, 1533, 2187
FspBI	CTAG	2 cut(s)	198, 1979
GluI	GCNGC	6 cut(s)	690, 942, 1050, 1123, 1533, 2187
GsaI	CCCAGC	1 cut(s)	1230
GsuI	CTGGAG	4 cut(s)	587, 600, 915, 2264
HaeIII	GGCC	4 cut(s)	178, 207, 575, 1026
HapII	CCGG	6 cut(s)	36, 48, 1569, 2002, 2223, 2270
Hin1II	CATG	9 cut(s)	110, 770, 831, 1049, 1323, 1781, 1793, 2027, 2150
HincII	GTYRAC	1 cut(s)	639
HindII	GTYRAC	1 cut(s)	639
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	8 cut(s)	170, 872, 1142, 1307, 1334, 1751, 2090, 2248
HpaII	CCGG	6 cut(s)	36, 48, 1569, 2002, 2223, 2270
HphI	GGTGA	8 cut(s)	50, 233, 613, 1000, 1475, 1705, 2186, 2212
Hpy166II	GTNNAC	5 cut(s)	76, 565, 639, 1008, 1510
Hpy8I	GTNNAC	5 cut(s)	76, 565, 639, 1008, 1510
Hpy99I	CGWCG	1 cut(s)	23
HpyCH4III	ACNGT	2 cut(s)	1594, 1840
HpyCH4IV	ACGT	4 cut(s)	21, 447, 1370, 1665
HpyF10VI	GCNNNNNNNGC	3 cut(s)	875, 905, 2041
HpyF3I	CTNAG	7 cut(s)	480, 570, 746, 1587, 1929, 2115, 2141
HpySE526I	ACGT	4 cut(s)	21, 447, 1370, 1665
Hsp92II	CATG	9 cut(s)	110, 770, 831, 1049, 1323, 1781, 1793, 2027, 2150
KpnI	GGTACC	1 cut(s)	2270
Ksp22I	TGATCA	1 cut(s)	1108
LguI	GCTCTTC	2 cut(s)	255, 1029
LmnI	GCTCC	5 cut(s)	10, 250, 896, 1540, 2069
Lsp1109I	GCAGC	6 cut(s)	676, 953, 1036, 1134, 1519, 2198
LweI	GCATC	4 cut(s)	277, 397, 785, 1090
MabI	ACCWGGT	1 cut(s)	964
MaeI	CTAG	2 cut(s)	198, 1979
MaeII	ACGT	4 cut(s)	21, 447, 1370, 1665
MaeIII	GTNAC	7 cut(s)	325, 376, 619, 952, 1134, 1463, 2174
MbiI	CCGCTC	1 cut(s)	2240
MflI	RGATCY	2 cut(s)	300, 487
MhlI	GDGCHC	2 cut(s)	15, 1912
MlsI	TGGCCA	1 cut(s)	207
MluI	ACGCGT	1 cut(s)	2257
MluNI	TGGCCA	1 cut(s)	207
MlyI	GAGTC	3 cut(s)	1136, 1316, 2084
MmeI	TCCRAC	2 cut(s)	172, 2309
Mox20I	TGGCCA	1 cut(s)	207
Mph1103I	ATGCAT	2 cut(s)	292, 778
MscI	TGGCCA	1 cut(s)	207
MseI	TTAA	4 cut(s)	513, 1556, 1694, 2262
MslI	CAYNNNNRTG	2 cut(s)	81, 771
Msp20I	TGGCCA	1 cut(s)	207
MspA1I	CMGCKG	4 cut(s)	218, 247, 878, 1445
MspI	CCGG	6 cut(s)	36, 48, 1569, 2002, 2223, 2270
MspR9I	CCNGG	6 cut(s)	64, 180, 894, 966, 1570, 1821
Mva1269I	GAATGC	1 cut(s)	854
MvaI	CCWGG	5 cut(s)	64, 180, 894, 966, 1821
MvnI	CGCG	1 cut(s)	2259
MwoI	GCNNNNNNNGC	3 cut(s)	875, 905, 2041
NciI	CCSGG	1 cut(s)	1570
NcoI	CCATGG	2 cut(s)	827, 1789
NdeI	CATATG	2 cut(s)	505, 1363
NlaIII	CATG	9 cut(s)	110, 770, 831, 1049, 1323, 1781, 1793, 2027, 2150
NlaIV	GGNNCC	6 cut(s)	557, 970, 1584, 1801, 2071, 2268
NmuCI	GTSAC	5 cut(s)	325, 619, 952, 1463, 2174
NsiI	ATGCAT	2 cut(s)	292, 778
NspI	RCATGY	1 cut(s)	1049
PaeI	GCATGC	1 cut(s)	1049
PasI	CCCWGGG	1 cut(s)	63
PciSI	GCTCTTC	2 cut(s)	255, 1029
PcsI	WCGNNNNNNNCGW	3 cut(s)	453, 2082, 2118
PctI	GAATGC	1 cut(s)	854
PfeI	GAWTC	5 cut(s)	170, 872, 1334, 1751, 2248
Pfl23II	CGTACG	1 cut(s)	1371
PflFI	GACNNNGTC	1 cut(s)	1235
PfoI	TCCNGGA	1 cut(s)	892
PinAI	ACCGGT	2 cut(s)	47, 2269
PkrI	GCNGC	6 cut(s)	691, 943, 1051, 1124, 1534, 2188
PleI	GAGTC	3 cut(s)	1136, 1315, 2084
PpsI	GAGTC	3 cut(s)	1136, 1315, 2084
Ppu21I	YACGTR	1 cut(s)	448
PpuMI	RGGWCCY	1 cut(s)	1583
PsiI	TTATAA	1 cut(s)	1073
Psp5II	RGGWCCY	1 cut(s)	1583
Psp6I	CCWGG	5 cut(s)	62, 178, 892, 964, 1819
PspFI	CCCAGC	1 cut(s)	1226
PspGI	CCWGG	5 cut(s)	62, 178, 892, 964, 1819
PspLI	CGTACG	1 cut(s)	1371
PspN4I	GGNNCC	6 cut(s)	557, 970, 1584, 1801, 2071, 2268
PspPI	GGNCC	5 cut(s)	574, 1358, 1583, 1799, 2225
PspPPI	RGGWCCY	1 cut(s)	1583
PsrI	GAACNNNNNNTAC	2 cut(s)	1958, 1990
PstI	CTGCAG	2 cut(s)	318, 594
PsuI	RGATCY	2 cut(s)	300, 487
PsyI	GACNNNGTC	1 cut(s)	1235
PvuII	CAGCTG	3 cut(s)	218, 878, 1445
RsaI	GTAC	6 cut(s)	446, 450, 865, 1373, 2210, 2268
RsaNI	GTAC	6 cut(s)	445, 449, 864, 1372, 2209, 2267
RseI	CAYNNNNRTG	2 cut(s)	81, 771
SapI	GCTCTTC	2 cut(s)	255, 1029
SaqAI	TTAA	4 cut(s)	513, 1556, 1694, 2262
SatI	GCNGC	6 cut(s)	690, 942, 1050, 1123, 1533, 2187
Sau96I	GGNCC	5 cut(s)	574, 1358, 1583, 1799, 2225
ScaI	AGTACT	2 cut(s)	865, 2210
SchI	GAGTC	3 cut(s)	1136, 1316, 2084
ScrFI	CCNGG	6 cut(s)	64, 180, 894, 966, 1570, 1821
SduI	GDGCHC	2 cut(s)	15, 1912
SexAI	ACCWGGT	1 cut(s)	964
SfaNI	GCATC	4 cut(s)	277, 397, 785, 1090
SfcI	CTRYAG	3 cut(s)	314, 590, 1701
SinI	GGWCC	4 cut(s)	1358, 1583, 1799, 2225
SmiMI	CAYNNNNRTG	2 cut(s)	81, 771
SmlI	CTYRAG	5 cut(s)	254, 859, 1196, 1499, 1658
SmoI	CTYRAG	5 cut(s)	254, 859, 1196, 1499, 1658
SnaBI	TACGTA	1 cut(s)	448
SphI	GCATGC	1 cut(s)	1049
SsiI	CCGC	5 cut(s)	5, 247, 869, 1496, 2238
SspMI	CTAG	2 cut(s)	198, 1979
StyD4I	CCNGG	6 cut(s)	62, 178, 892, 964, 1568, 1819
StyI	CCWWGG	2 cut(s)	827, 1789
TaaI	ACNGT	2 cut(s)	1594, 1840
TaiI	ACGT	4 cut(s)	24, 450, 1373, 1668
TaqI	TCGA	9 cut(s)	18, 154, 627, 1186, 1426, 1517, 1997, 2121, 2253
TatI	WGTACW	2 cut(s)	863, 2208
TfiI	GAWTC	5 cut(s)	170, 872, 1334, 1751, 2248
Tru1I	TTAA	4 cut(s)	513, 1556, 1694, 2262
Tru9I	TTAA	4 cut(s)	513, 1556, 1694, 2262
TscAI	CASTG	5 cut(s)	574, 957, 1072, 1845, 1917
TseFI	GTSAC	5 cut(s)	325, 619, 952, 1463, 2174
TseI	GCWGC	6 cut(s)	689, 941, 1049, 1122, 1532, 2186
Tsp45I	GTSAC	5 cut(s)	325, 619, 952, 1463, 2174
TspDTI	ATGAA	9 cut(s)	95, 334, 858, 864, 1395, 1405, 1632, 1794, 2076
TspGWI	ACGGA	1 cut(s)	1046
TspRI	CASTG	5 cut(s)	574, 957, 1072, 1845, 1917
Tth111I	GACNNNGTC	1 cut(s)	1235
VpaK11BI	GGWCC	4 cut(s)	1358, 1583, 1799, 2225
XapI	RAATTY	2 cut(s)	341, 1211
XceI	RCATGY	1 cut(s)	1049
XcmI	CCANNNNNNNNNTGG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	1509
XspI	CTAG	2 cut(s)	198, 1979
ZrmI	AGTACT	2 cut(s)	865, 2210
Zsp2I	ATGCAT	2 cut(s)	292, 778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.