Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0009385

Physical Location & Seq

Genomic Coordinates Reverse (-)

27529432 .. 27540324

Gene Structure 10893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1227300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCGGTGACAGAAGGTGATGTTCATAGACAAGAAGAGTACTTTGACGTCCTCACCAAAACCGGCCAGAAGACCGGCATTTCCAAGCCCAGGGGAGATGTTCATCGAGACGGGGATTACCATCGAGCTGTTCATGTGTGGATTTTTGCTGAGAGTACACAAGAGCTGCTTATCCAAAAGCGTTCCGACTGCAAGGATTTGTGGGCGGGACGGTGGGATATCTCAAGTGCTGGACACATATCCGCTGGTGATTCGTCACTTATAACAGCTCGGAGGGAGCTTCAAGAAGAGCTGGGTATAGTACTTCCAAAGGATGCATTTGAAATGCTGTTCGTTTATCTTGAAGAGTGTGTGACAAATGATGGAAAATTCATTAACAATGAATTCAATGATGTATATTTGGTAACAACTGTGAATCCAATCCCTCTCGACGCATTTACTCTTCAGGAAACGGAAGTCTCTGCTGTTAAATATATTTCTTATGAGGACTACAGAAACTTACTTGCTAAAGAAGACCCTGATTGCGTCCCCTACGACGGAAATGGGCAATATGGTCAGCTTTTTGACATAATTGCACGGAGGTACAAGGAGAACACTATCGGTCGAAGTTTAACACTACAAAAGCAACTCCAACGTTATGCTCCTGTTTCCCTCAGTGCCGAGTTAACAGGTCTTACAGAGGCAGACAGGGAGGCCCTGGTGTTACTGATTAAGGCTGCAGCAATTATAGATCAAATCTTTTACCTTCAGGTTTGGTGCTGTAATCCGGTTCTAAGGGATTGGTTGAAGAAGCATGCGGATGCATCACAGTTAGACAAGTTGAAATGGATGTCGTCCCTTGATGAAAATGAGGCATTTTTGACAACTGCAGATTCGGCTATAAAGTTGCTTCCTGAAGCAACAAAACGGGTTACTGGGTGGAAGGGACTTGAATACAAAGCTGCGTTTCCTATGCAGAAACCTCCTGGCGCAAACTTGTATCCGCCAGACATGGACAAAGTGGAATTTGAATTGTGGAAGAAAAGTCTAACTGAGGACCAAAAACAAGCTGCAACAAGCTTTTTCACAGTTACTAAAAGGCAAAGCGAATTAAGTCTGGATTCATCCTTGTATGGCTGTACAGATGAAAGCACAAGTCATTCAGTGACATCCACTCATGATCTATATAGTTTATTGCATAAAGCCGGTGAATTGGCCAGTTCCCCTAGTTTGAAGAGATTTTTTCACAGCAAGGCTGATGCTTTCCTTTCAAATGACTACTATGACTCGGATATAGCCTGGATGGAGTTGAACTCTAAGCTGGATGTTACTATTGGTCCATATGAAACATATGAAGATGCTCTTTTTGGATACAAGGACATATTTGGGAATTTAAGTGATGTAGCATGGCTACTTTTGAGGCATTTATTGGAGTTCGGGATGACAAAGGCAACTGCTCAAGTAAAGCTTTTTGGTGACAATTTGCAGGTTTTGGAACAAAATCTGCCACTGGACAGTGTCTACAAGTCCAAAGATGTGAAATCTGCTCCTATTCGAGATGTCAAGGGTCCTCAAACTGTTGCTTTTAATCTACCAAATGACGAGCGTATTGTAAAAGATCGAGGAACATCAATGGTCATGCTTAAGAATATCTCAGAGGCCAAGTTCAAGCACATTCTTCTGCCTATAGCCGATGTTTGTATTATCACAAAGGAACAACAGGAACTTGTAGATTTTGAATCTTTCTTCACTCACATAATGTGCCATGAGTGCTGCCATGGGATTGGACCTCATAGCATTACACTTCCAGATGGTAGAAAGTCAACAGTGAGATTGGAACTGCAAGAACTCCACTCAGCTCTGGAAGAAGCAAAAGCTGATATAGTTGGCCTTTGGGCATTGAAGTTCCTAATCCACAAGGACATGCTCCCAAAGAGTTTATTGAAGTCTATGTATGTTTCTTTTCTTGCTGGGTGCTTCCGCTCCGTACGGTTTGGTCTTGAAAAAGCTCATGGAAAAGGACAAGCGTTGCAATTTAACTGGTTGTATGAGGAAGGAGCCATTATTTTGAATGCTGATGAAACATTTTCTGTTGACTTTACCAAGGGCGAATACTCACCATACAAGCAAAAGGTGACAAGGAGGCTGCGAAATGTGCTGCTTCAGAAATACGGCATAATGACGAACCCAATAAAAGTTGCTATGCAAGAAATTAGAGAAAATTCAGGTCCCCGTGGATATAGTTCCCACATTCCCGGTAATAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

749

Amino Acids

84.8

Weight (kDa)

5.7

Isoelectric Point (pI)

39.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUDIX	PF00293	40 - 171	2.2e-14	NUDIX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79690 AT1G79690
fragaria_vesca	FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160
malus_domestica	MD17G1227300.v1.1
prunus_persica	Prupe.3G104700_v2.0.a1
pyrus_communis	pycom17g23060
rosa_chinensis	RchiOBHm_Chr2g0132121
rosa_laevigata	RLG00000019229
rosa_multiflora	Rmu_sc0002005.1_g000003 Rmu_sc0009538.1_g000018 Rmu_sc0033552.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112380
rosa_rugosa	Rorug02G0302400
rosa_samantha	Rh2AG355500 Rh2BG361600 Rh2CG339000
rosa_wichuraiana	Rw2G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	263
AatII	GACGTC	1 cut(s)	51
Acc36I	ACCTGC	1 cut(s)	1456
AccBSI	CCGCTC	1 cut(s)	1962
AccI	GTMKAC	1 cut(s)	1500
AciI	CCGC	6 cut(s)	5, 206, 243, 797, 983, 1960
AclI	AACGTT	1 cut(s)	634
AcoI	YGGCCR	2 cut(s)	64, 1194
AcsI	RAATTY	5 cut(s)	368, 383, 1004, 1369, 2200
AcuI	CTGAAG	4 cut(s)	428, 731, 915, 2126
AcyI	GRCGYC	1 cut(s)	48
AfaI	GTAC	6 cut(s)	41, 157, 303, 584, 1120, 1968
AfiI	CCNNNNNNNGG	2 cut(s)	90, 536
AflII	CTTAAG	1 cut(s)	1622
AjnI	CCWGG	4 cut(s)	89, 696, 964, 1277
Alw26I	GTCTC	2 cut(s)	102, 463
AoxI	GGCC	5 cut(s)	64, 693, 1194, 1638, 1867
ApeKI	GCWGC	8 cut(s)	166, 716, 719, 941, 1049, 1752, 2125, 2137
ApoI	RAATTY	5 cut(s)	368, 383, 1004, 1369, 2200
AspLEI	GCGC	1 cut(s)	971
AspS9I	GGNCC	6 cut(s)	694, 1036, 1316, 1547, 1766, 2207
AsuC2I	CCSGG	1 cut(s)	2235
AsuHPI	GGTGA	8 cut(s)	19, 29, 46, 260, 1199, 1466, 2088, 2125
AvaII	GGWCC	5 cut(s)	1036, 1316, 1547, 1766, 2207
BalI	TGGCCA	1 cut(s)	1196
BbsI	GAAGAC	2 cut(s)	77, 519
BbvI	GCAGC	8 cut(s)	153, 703, 731, 928, 1036, 1739, 2112, 2124
BccI	CCATC	4 cut(s)	129, 356, 1276, 1784
BceAI	ACGGC	1 cut(s)	2167
BciT130I	CCWGG	4 cut(s)	91, 698, 966, 1279
BciVI	GTATCC	2 cut(s)	990, 1343
BcnI	CCSGG	1 cut(s)	2235
BcoDI	GTCTC	2 cut(s)	102, 463
BfaI	CTAG	1 cut(s)	1206
BfmI	CTRYAG	4 cut(s)	490, 717, 867, 1665
BfrI	CTTAAG	1 cut(s)	1622
BfuAI	ACCTGC	1 cut(s)	1456
BfuI	GTATCC	2 cut(s)	990, 1343
BisI	GCNGC	8 cut(s)	167, 717, 720, 942, 1050, 1753, 2126, 2138
BlsI	GCNGC	8 cut(s)	168, 718, 721, 943, 1051, 1754, 2127, 2139
BmcAI	AGTACT	2 cut(s)	41, 303
Bme1390I	CCNGG	5 cut(s)	91, 698, 966, 1279, 2235
Bme18I	GGWCC	5 cut(s)	1036, 1316, 1547, 1766, 2207
BmgT120I	GGNCC	6 cut(s)	694, 1036, 1316, 1547, 1766, 2207
BmiI	GGNNCC	3 cut(s)	1548, 2038, 2209
BmrFI	CCNGG	5 cut(s)	91, 698, 966, 1279, 2235
BmrI	ACTGGG	1 cut(s)	924
BmsI	GCATC	5 cut(s)	304, 790, 812, 1228, 1327
BmuI	ACTGGG	1 cut(s)	924
BpiI	GAAGAC	2 cut(s)	77, 519
BplI	GAGNNNNNCTC	2 cut(s)	1277, 1309
BpuEI	CTTGAG	2 cut(s)	208, 1422
BpuMI	CCSGG	1 cut(s)	2235
BsaBI	GATNNNNATC	2 cut(s)	102, 120
BsaHI	GRCGYC	1 cut(s)	48
BsaJI	CCNNGG	6 cut(s)	89, 90, 696, 1756, 2082, 2212
BsaWI	WCCGGW	1 cut(s)	766
Bsc4I	CCNNNNNNNGG	2 cut(s)	90, 536
Bse118I	RCCGGY	3 cut(s)	62, 74, 1184
Bse1I	ACTGG	4 cut(s)	919, 1197, 1494, 2024
Bse8I	GATNNNNATC	2 cut(s)	102, 120
BseBI	CCWGG	4 cut(s)	91, 698, 966, 1279
BseDI	CCNNGG	6 cut(s)	89, 90, 696, 1756, 2082, 2212
BseGI	GGATG	8 cut(s)	319, 805, 834, 1103, 1148, 1287, 1309, 1425
BseJI	GATNNNNATC	2 cut(s)	102, 120
BseLI	CCNNNNNNNGG	2 cut(s)	90, 536
BseMII	CTCAG	5 cut(s)	141, 667, 1023, 1647, 1848
BseNI	ACTGG	4 cut(s)	919, 1197, 1494, 2024
BseXI	GCAGC	8 cut(s)	153, 703, 731, 928, 1036, 1739, 2112, 2124
BseYI	CCCAGC	2 cut(s)	292, 1949
Bsh1285I	CGRYCG	1 cut(s)	604
BshFI	GGCC	5 cut(s)	66, 695, 1196, 1640, 1869
BsiEI	CGRYCG	1 cut(s)	604
BsiSI	CCGG	5 cut(s)	63, 75, 767, 1185, 2235
BsiWI	CGTACG	1 cut(s)	1966
BslFI	GGGAC	5 cut(s)	222, 512, 820, 939, 2193
BslI	CCNNNNNNNGG	2 cut(s)	90, 536
BsmAI	GTCTC	2 cut(s)	102, 463
BsmBI	CGTCTC	1 cut(s)	102
BsmFI	GGGAC	5 cut(s)	222, 512, 820, 939, 2193
BsmI	GAATGC	1 cut(s)	2056
BsnI	GGCC	5 cut(s)	66, 695, 1196, 1640, 1869
Bsp1407I	TGTACA	1 cut(s)	1118
Bsp143I	GATC	3 cut(s)	730, 1159, 1597
Bsp19I	CCATGG	1 cut(s)	1756
BspACI	CCGC	6 cut(s)	5, 206, 243, 797, 983, 1960
BspANI	GGCC	5 cut(s)	66, 695, 1196, 1640, 1869
BspCNI	CTCAG	5 cut(s)	142, 666, 1024, 1646, 1847
BspHI	TCATGA	1 cut(s)	1156
BspLI	GGNNCC	3 cut(s)	1548, 2038, 2209
BspMAI	CTGCAG	2 cut(s)	721, 871
BspMI	ACCTGC	1 cut(s)	1456
BspQI	GCTCTTC	1 cut(s)	282
BspTI	CTTAAG	1 cut(s)	1622
BsrBI	CCGCTC	1 cut(s)	1962
BsrFI	RCCGGY	3 cut(s)	62, 74, 1184
BsrGI	TGTACA	1 cut(s)	1118
BsrI	ACTGG	4 cut(s)	919, 1197, 1494, 2024
BssAI	RCCGGY	3 cut(s)	62, 74, 1184
BssECI	CCNNGG	6 cut(s)	89, 90, 696, 1756, 2082, 2212
BssMI	GATC	3 cut(s)	730, 1159, 1597
BssNI	GRCGYC	1 cut(s)	48
BssT1I	CCWWGG	2 cut(s)	1756, 2082
Bst2UI	CCWGG	4 cut(s)	91, 698, 966, 1279
Bst4CI	ACNGT	8 cut(s)	213, 412, 810, 1069, 1496, 1558, 1807, 1971
Bst6I	CTCTTC	5 cut(s)	30, 282, 339, 447, 1208
BstACI	GRCGYC	1 cut(s)	48
BstAFI	CTTAAG	1 cut(s)	1622
BstAUI	TGTACA	1 cut(s)	1118
BstC8I	GCNNGC	1 cut(s)	795
BstDEI	CTNAG	7 cut(s)	150, 653, 773, 1032, 1296, 1633, 1834
BstDSI	CCRYGG	2 cut(s)	1756, 2212
BstF5I	GGATG	8 cut(s)	319, 805, 834, 1103, 1148, 1287, 1309, 1425
BstHHI	GCGC	1 cut(s)	971
BstKTI	GATC	3 cut(s)	733, 1162, 1600
BstMAI	GTCTC	2 cut(s)	102, 463
BstMBI	GATC	3 cut(s)	730, 1159, 1597
BstMCI	CGRYCG	1 cut(s)	604
BstMWI	GCNNNNNNNGC	3 cut(s)	875, 1749, 2134
BstNI	CCWGG	4 cut(s)	91, 698, 966, 1279
BstNSI	RCATGY	2 cut(s)	797, 1906
BstSCI	CCNGG	5 cut(s)	89, 696, 964, 1277, 2233
BstSFI	CTRYAG	4 cut(s)	490, 717, 867, 1665
BstV1I	GCAGC	8 cut(s)	153, 703, 731, 928, 1036, 1739, 2112, 2124
BstV2I	GAAGAC	2 cut(s)	77, 519
BstXI	CCANNNNNNTGG	1 cut(s)	1763
BsuI	GTATCC	2 cut(s)	990, 1343
BsuRI	GGCC	5 cut(s)	66, 695, 1196, 1640, 1869
BtgI	CCRYGG	2 cut(s)	1756, 2212
BtsCI	GGATG	8 cut(s)	319, 805, 834, 1103, 1148, 1287, 1309, 1425
BtsIMutI	CAGTG	5 cut(s)	661, 1149, 1487, 1501, 1812
BveI	ACCTGC	1 cut(s)	1456
Cac8I	GCNNGC	1 cut(s)	795
CciI	TCATGA	1 cut(s)	1156
CfoI	GCGC	1 cut(s)	971
Cfr10I	RCCGGY	3 cut(s)	62, 74, 1184
Cfr13I	GGNCC	6 cut(s)	694, 1036, 1316, 1547, 1766, 2207
CseI	GACGC	2 cut(s)	440, 514
Csp6I	GTAC	6 cut(s)	40, 156, 302, 583, 1119, 1967
CviQI	GTAC	6 cut(s)	40, 156, 302, 583, 1119, 1967
DdeI	CTNAG	7 cut(s)	150, 653, 773, 1032, 1296, 1633, 1834
DpnI	GATC	3 cut(s)	732, 1161, 1599
DpnII	GATC	3 cut(s)	730, 1159, 1597
EaeI	YGGCCR	2 cut(s)	64, 1194
Eam1104I	CTCTTC	5 cut(s)	30, 282, 339, 447, 1208
EarI	CTCTTC	5 cut(s)	30, 282, 339, 447, 1208
EciI	GGCGGA	1 cut(s)	972
Eco130I	CCWWGG	2 cut(s)	1756, 2082
Eco32I	GATATC	1 cut(s)	220
Eco47I	GGWCC	5 cut(s)	1036, 1316, 1547, 1766, 2207
Eco57I	CTGAAG	4 cut(s)	428, 731, 915, 2126
EcoO109I	RGGNCCY	3 cut(s)	694, 1547, 2207
EcoRI	GAATTC	1 cut(s)	383
EcoRII	CCWGG	4 cut(s)	89, 696, 964, 1277
EcoRV	GATATC	1 cut(s)	220
EcoT14I	CCWWGG	2 cut(s)	1756, 2082
EcoT22I	ATGCAT	2 cut(s)	319, 805
ErhI	CCWWGG	2 cut(s)	1756, 2082
Esp3I	CGTCTC	1 cut(s)	102
FalI	AAGNNNNNCTT	6 cut(s)	153, 185, 1326, 1358, 1431, 1463
FaqI	GGGAC	5 cut(s)	222, 512, 820, 939, 2193
FauI	CCCGC	1 cut(s)	199
FauNDI	CATATG	2 cut(s)	1321, 1330
FblI	GTMKAC	1 cut(s)	1500
Fnu4HI	GCNGC	8 cut(s)	167, 717, 720, 942, 1050, 1753, 2126, 2138
FokI	GGATG	8 cut(s)	326, 812, 841, 1090, 1135, 1294, 1316, 1432
Fsp4HI	GCNGC	8 cut(s)	167, 717, 720, 942, 1050, 1753, 2126, 2138
FspBI	CTAG	1 cut(s)	1206
GlaI	GCGC	1 cut(s)	970
GluI	GCNGC	8 cut(s)	167, 717, 720, 942, 1050, 1753, 2126, 2138
GsaI	CCCAGC	2 cut(s)	296, 1953
HaeIII	GGCC	5 cut(s)	66, 695, 1196, 1640, 1869
HapII	CCGG	5 cut(s)	63, 75, 767, 1185, 2235
HgaI	GACGC	2 cut(s)	440, 514
HhaI	GCGC	1 cut(s)	971
Hin1I	GRCGYC	1 cut(s)	48
Hin6I	GCGC	1 cut(s)	969
HinP1I	GCGC	1 cut(s)	969
HincII	GTYRAC	3 cut(s)	666, 1803, 2074
HindII	GTYRAC	3 cut(s)	666, 1803, 2074
HindIII	AAGCTT	2 cut(s)	1057, 1445
HinfI	GANTC	6 cut(s)	251, 415, 872, 1100, 1265, 1718
HpaI	GTTAAC	1 cut(s)	666
HpaII	CCGG	5 cut(s)	63, 75, 767, 1185, 2235
HphI	GGTGA	8 cut(s)	19, 29, 46, 260, 1199, 1466, 2088, 2125
Hpy166II	GTNNAC	5 cut(s)	158, 666, 1501, 1803, 2074
Hpy188I	TCNGA	5 cut(s)	187, 273, 1270, 1636, 2145
Hpy8I	GTNNAC	5 cut(s)	158, 666, 1501, 1803, 2074
Hpy99I	CGWCG	2 cut(s)	434, 539
HpyAV	CCTTC	4 cut(s)	8, 755, 916, 2027
HpyCH4III	ACNGT	8 cut(s)	213, 412, 810, 1069, 1496, 1558, 1807, 1971
HpyCH4IV	ACGT	2 cut(s)	48, 634
HpyF10VI	GCNNNNNNNGC	3 cut(s)	875, 1749, 2134
HpyF3I	CTNAG	7 cut(s)	150, 653, 773, 1032, 1296, 1633, 1834
HpySE526I	ACGT	2 cut(s)	48, 634
Hsp92I	GRCGYC	1 cut(s)	48
HspAI	GCGC	1 cut(s)	969
KspAI	GTTAAC	1 cut(s)	666
Kzo9I	GATC	3 cut(s)	730, 1159, 1597
LguI	GCTCTTC	1 cut(s)	282
LmnI	GCTCC	6 cut(s)	277, 646, 1531, 1911, 1967, 2036
Lsp1109I	GCAGC	8 cut(s)	153, 703, 731, 928, 1036, 1739, 2112, 2124
LweI	GCATC	5 cut(s)	304, 790, 812, 1228, 1327
MaeI	CTAG	1 cut(s)	1206
MaeII	ACGT	2 cut(s)	48, 634
MalI	GATC	3 cut(s)	732, 1161, 1599
MbiI	CCGCTC	1 cut(s)	1962
MboI	GATC	3 cut(s)	730, 1159, 1597
MlsI	TGGCCA	1 cut(s)	1196
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	1 cut(s)	1259
MmeI	TCCRAC	2 cut(s)	210, 655
Mox20I	TGGCCA	1 cut(s)	1196
Mph1103I	ATGCAT	2 cut(s)	319, 805
MscI	TGGCCA	1 cut(s)	1196
MslI	CAYNNNNRTG	1 cut(s)	798
Msp20I	TGGCCA	1 cut(s)	1196
MspA1I	CMGCKG	1 cut(s)	245
MspCI	CTTAAG	1 cut(s)	1622
MspI	CCGG	5 cut(s)	63, 75, 767, 1185, 2235
MspR9I	CCNGG	5 cut(s)	91, 698, 966, 1279, 2235
Mva1269I	GAATGC	1 cut(s)	2056
MvaI	CCWGG	4 cut(s)	91, 698, 966, 1279
MwoI	GCNNNNNNNGC	3 cut(s)	875, 1749, 2134
NciI	CCSGG	1 cut(s)	2235
NcoI	CCATGG	1 cut(s)	1756
NdeI	CATATG	2 cut(s)	1321, 1330
NdeII	GATC	3 cut(s)	730, 1159, 1597
NlaIV	GGNNCC	3 cut(s)	1548, 2038, 2209
NmeAIII	GCCGAG	1 cut(s)	685
NmuCI	GTSAC	6 cut(s)	7, 255, 352, 1144, 1454, 2113
NsiI	ATGCAT	2 cut(s)	319, 805
NspI	RCATGY	2 cut(s)	797, 1906
PaeI	GCATGC	1 cut(s)	797
PagI	TCATGA	1 cut(s)	1156
PasI	CCCWGGG	1 cut(s)	90
PciSI	GCTCTTC	1 cut(s)	282
PctI	GAATGC	1 cut(s)	2056
PfeI	GAWTC	5 cut(s)	251, 415, 872, 1100, 1718
Pfl23II	CGTACG	1 cut(s)	1966
PflFI	GACNNNGTC	1 cut(s)	1496
PkrI	GCNGC	8 cut(s)	168, 718, 721, 943, 1051, 1754, 2127, 2139
PleI	GAGTC	1 cut(s)	1259
PpsI	GAGTC	1 cut(s)	1259
PpuMI	RGGWCCY	2 cut(s)	1547, 2207
PsiI	TTATAA	1 cut(s)	263
Psp1406I	AACGTT	1 cut(s)	634
Psp5II	RGGWCCY	2 cut(s)	1547, 2207
Psp6I	CCWGG	4 cut(s)	89, 696, 964, 1277
PspFI	CCCAGC	2 cut(s)	292, 1949
PspGI	CCWGG	4 cut(s)	89, 696, 964, 1277
PspLI	CGTACG	1 cut(s)	1966
PspN4I	GGNNCC	3 cut(s)	1548, 2038, 2209
PspPI	GGNCC	6 cut(s)	694, 1036, 1316, 1547, 1766, 2207
PspPPI	RGGWCCY	2 cut(s)	1547, 2207
PstI	CTGCAG	2 cut(s)	721, 871
PsyI	GACNNNGTC	1 cut(s)	1496
RsaI	GTAC	6 cut(s)	41, 157, 303, 584, 1120, 1968
RsaNI	GTAC	6 cut(s)	40, 156, 302, 583, 1119, 1967
RseI	CAYNNNNRTG	1 cut(s)	798
SapI	GCTCTTC	1 cut(s)	282
SatI	GCNGC	8 cut(s)	167, 717, 720, 942, 1050, 1753, 2126, 2138
Sau3AI	GATC	3 cut(s)	730, 1159, 1597
Sau96I	GGNCC	6 cut(s)	694, 1036, 1316, 1547, 1766, 2207
ScaI	AGTACT	2 cut(s)	41, 303
SchI	GAGTC	1 cut(s)	1259
ScrFI	CCNGG	5 cut(s)	91, 698, 966, 1279, 2235
SfaNI	GCATC	5 cut(s)	304, 790, 812, 1228, 1327
SfcI	CTRYAG	4 cut(s)	490, 717, 867, 1665
SinI	GGWCC	5 cut(s)	1036, 1316, 1547, 1766, 2207
SmiMI	CAYNNNNRTG	1 cut(s)	798
SmlI	CTYRAG	3 cut(s)	223, 1437, 1622
SmoI	CTYRAG	3 cut(s)	223, 1437, 1622
SphI	GCATGC	1 cut(s)	797
SsiI	CCGC	6 cut(s)	5, 206, 243, 797, 983, 1960
SspMI	CTAG	1 cut(s)	1206
StyD4I	CCNGG	5 cut(s)	89, 696, 964, 1277, 2233
StyI	CCWWGG	2 cut(s)	1756, 2082
TaaI	ACNGT	8 cut(s)	213, 412, 810, 1069, 1496, 1558, 1807, 1971
TaiI	ACGT	2 cut(s)	51, 637
TaqI	TCGA	6 cut(s)	106, 124, 429, 604, 1534, 1600
TaqII	GACCGA	1 cut(s)	590
TatI	WGTACW	4 cut(s)	39, 155, 301, 1118
TfiI	GAWTC	5 cut(s)	251, 415, 872, 1100, 1718
TscAI	CASTG	5 cut(s)	661, 1149, 1494, 1501, 1812
TseFI	GTSAC	6 cut(s)	7, 255, 352, 1144, 1454, 2113
TseI	GCWGC	8 cut(s)	166, 716, 719, 941, 1049, 1752, 2125, 2137
Tsp45I	GTSAC	6 cut(s)	7, 255, 352, 1144, 1454, 2113
TspGWI	ACGGA	4 cut(s)	467, 552, 592, 1954
TspRI	CASTG	5 cut(s)	661, 1149, 1494, 1501, 1812
Tth111I	GACNNNGTC	1 cut(s)	1496
Vha464I	CTTAAG	1 cut(s)	1622
VpaK11BI	GGWCC	5 cut(s)	1036, 1316, 1547, 1766, 2207
XapI	RAATTY	5 cut(s)	368, 383, 1004, 1369, 2200
XceI	RCATGY	2 cut(s)	797, 1906
XmiI	GTMKAC	1 cut(s)	1500
XspI	CTAG	1 cut(s)	1206
ZraI	GACGTC	1 cut(s)	49
ZrmI	AGTACT	2 cut(s)	41, 303
Zsp2I	ATGCAT	2 cut(s)	319, 805

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.